TCONS_00018979 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00018979
Unique Name	TCONS_00018979
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1325

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000314:194174..205366+

transcript sequence

>TCONS_00018979 ID=TCONS_00018979|Name=TCONS_00018979|organism=Clytia hemisphaerica|type=transcript|length=1325bp
tagcaaatgaaaaattgataaaaagtaattaaaaagcAACCACAAGCCGC
TATTACCAGCGCATAGACAACATCATAAATCAATTATAATTGTCGTTGcc
agagaaaaataatttcctaCCAATATCTTCTGGTATTTGTAGTAAGACGT
GATTCCCAATCAGAGTGGATTTGCATTACAATTATCGATGATCCGATaat
gAAGGAGATTACTTGACATGCCAACCAACATATTGATTCTAGCGAAATTG
GGTGCTGGTACTGGTAACAGAACAACTGCTGAACGTATCAGGCAGCACTT
GAACAATTCGGATTTGTGCCCACTTCTTTGTGACGTCACACAATTCCGAT
CACCACGTGACCTTTCTGATTATGTCATCCATAATGACGTCACTTGTCTC
ATTGTTATTCATGCGTACAGAgctggaaaatttttaaacgACATCAGTAT
ACCATTTGCGTTGGTATTTGGTGGAACTGACGTTCAATGTTCATCCTGGA
ATGATCAAGAAAATGCAATCATGGCTGATGTTGTTGCCAAGGCAATAGTT
CTGATCGCGTTTTCAGAAGTCATGAAAGAAGCAGCATCGGTCAAATGGCC
ATCAATCttgaaagagaaaaagatatTTGTACAACCGCAAGGTGTGACAA
TTGAGAGGATAGGACCGACAAATTATTCGTTTCAACATCTATTCAATGAT
AATGGGATGAGCGaagttaaaacaaaagaaaagATAATTTTCCTGTTTGT
GGGTGGTATTAGACCGGTGAAAGATCCTTTGTTCCTGATTTATACTTTTG
CTCAGATGCATGAAGAGAATGATCGAATCCTGTTTGTCATCATCGGGCCC
ATACTGGATGAAGAATATGCTCGCAAATGTCGTCTCGCTACATCAAAaCT
GAAAGGGATATACATGTTTGATCAAATATCACGTGATAAAGTTCATGCTT
TGATACACCAATCTGTTGCTTTGGTCAATTCCTCCATCGAAGAAGGCATG
GCTGGAGCCATTCTTGAGtcaatgaAAATAGAGACACCAGTTGTTGTTCG
GAATAACCGTGGAAACGCATCCATTGTGCAGCATCAATCCACTGGATTGC
TTTTCCAACACCCACAAgattttagagaGCAAGCCAATCTTCTTTTGGAA
AACTCAACCCTGCGTAGAAACCTCATTCAAAACGCACAAGATTTCATCGA
GTCCAATCACAACCCTGATGTTGAACGTTCTACCTATcacgaaattatca
aaattcttGTCAAACCGTAGTAATTaacaaatacacgtttttttataaga
gaatccaaaatttttgaagcctttg

Run BLAST on NCBI

transcript from alignment at sc0000314:194174..205366+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00018979 ID=TCONS_00018979|Name=TCONS_00018979|organism=Clytia hemisphaerica|type=transcript|length=11193bp|location=Sequence derived from alignment at sc0000314:194174..205366+ (Clytia hemisphaerica)
tagcaaatgaaaaattgataaaaagtaattaaaaagcAACCACAAGCCGC
TATTACCAGCGCATAGACAACATCATAAATCAATTATAATTGTCGTTGcc
agagaaaaataatttcctaCCAATATCTTCTGGTATTTGTAGTAAGACGT
GATTCCCAATCAGAGTGGATTTGCATTACAATTATCGATGATCCGATGTA
cgtattttgttatttttttataatgtccAAATACACCTATCTGCAGACAC
GTGTTTTGTCCTTCCCAGGACTCGTCAGTGCGGCTCgggtaagcgagcat
agactgctgttgtctaaccagagtgctcaaaacactaagTTATGAGCTTc
gcataatcgcttgtggtgaaCGGAGAAGCAGAGCTTGCTTCTCAACAGAG
TCTATAGAGTGCTTAATACATGTCCAAATATACAGTTGCTCCGATTCATT
CGATCTATAAGGGGACcaaaattttgtgttaaaagaTTCAAATTACAGAG
AATATTTTTTAAGACATTCCAGTGGAAGGACTAAATGTAATGTTTGATTT
AGAATTACAGaggctcgaattagagagacaGGTTGGCTGTAATGTTCAAC
TTTTGTATTTAAAATAAtcatagtttttattttttattttttaagaatgA
AGGAGATTACTTGACATGCCAACCAACATATTGATTCTAGCGAAATTGGG
TGCTGGTACTGGTAACAGAACAACTGCTGAACGTATCAGGTGcttattta
ttgattttaaagCGACGGGAAGAGTGGGCCTGTAAGGAATTTTTTTGGAT
GGGGTATGAACACAGatctataaagcccgaagggctaagtcaactttaag
ctttctccagcaaaaattttcggagcgcgagatcaaaaaaagtaggcggc
aaacgctatttcgcatctctcaaacaaattgcttgttgtcacgtgattcc
TTTGGttggaaatcctaccaaaacttgcttcacttttcgataaaggccgc
ggATCTAATGAAGCCAATCTAATGAAGCCACCATtggtttttttcattta
atatACAAACAGAGGCTGGACGAATCTCTTCaactcaaaataaatttttg
aaaattatgtggataccccctgaaaaaattacagaaatttcatttcaacc
caggaaaaaatgaaaaaagacttCCCTTAGACCCTCTGCGAACTGTTCTA
GGAATTCTTAATGCAACGAACGTATTTAAAAGTCTCATTTTCTATTGTCT
GGGAAAATTGAAAGAATCCCCCTTAGGGGCTTCAAACTTATTGTACCTGT
CCTGTAGAAACCTTTTTCACAATATCTTTTTAGTCGTTCTTTTCAAAATT
GACAAACCTTTTATTTTTCCAGGCAGCACTTGAACAATTCGGATTTGTGC
CCACTTCTTTGTGACGTCACACAATTCCGATCACCACGTGACCTTTCTGA
TTATGTCATCCATAATGACGTCACTTGTCTCATTGTTATTCATGCGTACA
GAgctggaaaatttttaaacggTTTGGAAATTGTATTACTAAACTTACAG
TGCGGTGTTAAactgggcttttccagaaaaaccgTTCAAAAGTGGAAGAT
ATAATATTGTCAAAGGGAACAAAAAAAGACTGTCAAGCACCTCCTTTTTA
AACAGCTTGATCTGAAAATTTTCCACATGTAAATTTGATCAGCATTCTGG
TGGTCCACCAATGTTATCTGATGTAGGCGGTGAGTGACTAGGAGCTGAGG
GTTGGTGTGGCAATCCACTTAAGTATTCAATCTTCCACAGGGCTAGTGCA
CATAGAAAAGGATATAGACTCCCTGACTTCCACGGCCAACACTTACATAC
TTACTTCAAACACCTTTCAGACATCAGTATACCATTTGCGTTGGTATTTG
GTGGAACTGACGTTCAATGTTCATCCTGGAATGATCAAGAAAATGCAATC
ATGGCTGATGTTGTTGCCAAGGCAATGTGAGTTAAAACCCTAGAAactca
aaaaatctttatttctgTTGCCAAGGGTAACGAAGGCCAAGGAATCATTT
GCATTTGCTAATGATAATAAGGCTCAAGCTTAAGCATTTATATAGCTGGT
ACAGAGAAAATTTGactattttcatgaaatttccaACGACGGAAAACAAC
ATTACCTGAAGTGTAACGGAGCTTAACCTTCGATAAGCATGTTTTCCCAT
TGTGTTTCATGCCGAAAGCATGTGGCAAATCTTTAAACCTTTCCCAAGTT
TTACATTTACTTTgcgttttatatttttcaaattctggtGGTAAATGTTA
CTTTCAATCTATTGTTTGTATGGATTTTTCGTCGCCGTTAGGTAGGTCCG
ATCAACATctagtttgtttttttgtttcgacGGTTTCACTTTCACGAGTC
TCACTTTATCTACACCTTTTCTTTTAGAGTTCTGATCGCGTTTTCAGAAG
TCATGAAAGAAGCAGCATCGGTCAAATGGGTAGTGTATTTGTACATCCAT
CTTTGAATGACATATTTTTTCTCATAGAAGACGCTACTCGTATATGATTT
GTTAAACTAGCCTATTTTCGGTAGCTTTTacttcaactttttaaatttcg
atacACGTTttataataagaaaaaactatataatgAGCATCCTTATATGC
TgtggctaaaatattaagaacaagctaaggaCATTCTGAGGAtctgcaga
ctctaaaacactaaatttttaagaaattgcacaaaatggtgaaattaaga
acattaaaaaaaaattaggcttaaaactttGAGAAtatccgaaggtttca
aaaactgtttttattAGTAAAAGAAAACGTATATTTCACTAAATTCAGTT
TTCATCGGTAATTTCTTCTTCGTTCTTCTTTTAGCCATCAATCttgaaag
agaaaaagatatTTGTACAACCGCAAGGTAAAAGTCATTCCTCCCTTTTT
CGCTCCGTGCATCTTAAACCACCGTGTTAGTGCGATTGAACTCCTATTTG
CAGTTCTCATCAAGTGTAATCCGCTTGGGTGTCAGATTTTGATTAGTTTG
TAATgcaaagttgtattttttttcgTTGTCAGGTGTGACAATTGAGAGGA
TAGGACCGACAAATTATTCGTTTCAACATCTATTCAATGATAATGGGATG
GTGAGTTTGAACTTTGTCTCTCTCGATGATGGATTGTTACTTGTCAAGTA
CCATTAGCAAGTTCTAGACGCGGGACATTATAGCCTCTATAATGAGAAAA
TCAATTCATTATTTCCTGTTCTTTCTCTGCAGAGCGatgttaaaacaaaa
gaaaaggtaCCGATTTTCAATTGATCTATCTTGACTGAAGTTATCACAta
ttggacttttccagaaaaaaacctgttgaggaggtccatccctctttggc
tggaaatgctgtaacctGCTGTAACCCCCTAGAATttcaggcaatttcag
gtttaaacccttctggaattctgaattttagtaggatttaaaaagctacc
cccatggaattccagtcaTTTTTGACAGATTTNCTTTTTCCATACCTTAT
CTGTATTCGATCTTTTCATCTATTGGAATAAACACGAGCTTTTATTATTA
ACCTGATCAACCTATTTAGTTTTAGTAATTACAATTACATGTACTAGACA
TTTTGATTGATAGCGGAAATACCAGCAGCTTTACTCTTCAAGTTACTCAA
TAACGACTATAggagatttgaaattttattttgtagatTCAATATAATGT
ATATTTTTCACATGAGAGAAGATTGAGGGAAAGGCTATGTGATTCCAACC
AAAagacccctgtgtcacagacccgctgaggCCTTAGCCCCagtggaaaa
tttggcaaaaatttcgttcccggtgggaaaaatttcctaaattccagccc
cactgagaaattgactttgatttcatccccattcgaaattcatcgTTCAT
GCAAATTGcaatccaaaaccatccccactggatttggaacaaaataaatt
tttatccccgctgtaagaaaaagtttcaccggggctgtgagacaggggtg
taccaAACAAGACAGCCAAATCTTTCTTGACGATCTTACTTCTCTTTTCT
CTAATCTCTCATGGGAGTAATCAAtgtaataattatttttttgtatgtTT
ACTATATTATTGTTTATTATGAATTTATGAAGAATACTTttcgttttttg
tttgttttctttgatttacaAAATTGAAAGATATTTGAGGGGAAAGCTAA
ACATTCTTAATTAAAGAGAATtgactacatgtttttttttctataagcat
aacgtttataagcatatacaggCTCAGTTATTGGTTCCCTAAACAAtagc
tctattgtttaagaacaatagaatggtAAGCGTAATGtgagcctgatata
ggggtagacaattgcttataaaaaaacatgtatggtGATTTTATAATACA
TACTTCAACATGGCCTTTTTGGGCCTGAACCTGAACCTTTGTAAATTGAA
gtataatgttttttttgcatCATAATCTGCTTGTtcctgttttcttcttt
ttcattttagcaaatgaaaaattgataaaaagtaattaaaaagcAACCAC
AAGCCGCTATTACCAGCGCATAGACAACATCATAAATCAATTATAATTGT
CGTTGccagagaaaaataatttcctaCCAATATCTTCTGGTATTTGTAGT
AAGACGTGATTCCCAATCAGAGTGGATTTGCATTACAATTATCGATGATC
CGATGTAcgtattttgttatttttttataatgtccAAATACACCTATCCG
CAGACAAGtgtttcgtccttcccaggactcatcAGTGCGACTTgggtaag
cgagcatagactgctgttgtcgcaccagagtgctcaaaacactaagTGTT
GAGCTTCGCGTAATCGCTTGTGGTGAACGGAGAAGCAGAGCTTGCTCCTC
AACAGAGTCTATAGAGTGCTTAATACATGTCCAAATATACAGTTGCTCCG
ATTCATTCGATCTACAAGGGGACcaaaattttgtgttaaaagaTTCAAAT
CACAGAGAATATTTTTTAAGACATTCCAGTGGAAGGACTAAATTTAATGT
TTGATTTAGAATTACAGaggctcgaattagagagacaGGTTGGCTGTAAT
GTTCAACTTTTGTatttaaaataatcataatttttattttttatttttta
agaatgAAGGAGATTACTTGACATGCCAACCAACATATTGATTCTAGCGA
AATTGGGTGCTGGTACTGGCAACAGAACCACTGCTGAACGTATCAGGtgc
ttatttatttattttaaagcGACGGGAAGAGTGGGCCTGTAAGGAATTTT
TTTGGATGGGGTATGAACACAGatctataaagcccgaagggataagtcaa
ctttaagctttctccagcaaaagttttcggagcgcgagatcaaaaaaagt
aggcagcaaacgctatttcgcatctctcaaacaaATTGcctgttgtcacg
tgatttctttggtaggaaatcctaccaaaacttgcttcacttttcgatga
AGGCCGCGGATCTAATGAAGCCACCATtggtttttttcatttaatatACA
AACAGAGGCTGGACGAATCTCTTCaactcaaaataaatttttgaaaatta
tgtggataccccctgaaaaaattacagaaatttcatttcaacccaggaaa
aaatgaaaaaagacttCCCTTAGACCCTCTGNTGGAAAAATGAcagaaat
ttcatttcaacccaggaaaaaagaagaaaaaaaacttcccTTAGACCCTC
TGCGAACTGTTCTAGGAATTCTTAATGCAACGAACGTATTAAAGTCTCAT
TTTCTATTGTCTGGGAAAATTGAAAGAACCCCCCTTAGGGGCTTCAGAGT
TATTGTACCTGTCCTGTAAAAACCTTTTTCACAATATCTTTTTAGTCGTT
CTTTTCAAAATTGACAAACCTTTTATTTTTCCAGGCAGCACTTGAACAAT
TCGGACTTGTGCACACTTCTTTGTGACGTCACACAATTCCAATCACCACG
TGACCTTTCTGATTATGTCATTCATAATGACGTCACTTGTCTCATTGTTA
TTCATGCGTACAGAgctggaaaatttttaaacggTTTGGAAATTGTATTA
CTAAACTTACAGTGCGTTGTTAAactgggcttttccagaaaaaccgTTCA
AAAGTGGAAGATATATTGTCAAAGGGAACAAAAAAAGACTGTCAAGCACC
TCCTTTTTAAACAACTTgatctgaaaatttttccacATGTAAATTTGATC
AGCATTCTGGTGGTCCACCAATGTTATCTGATGTAGGCGGTGAGTGACTA
GGAGCTGAGGGTTGATGTGGCAATCCACTTAAGTATTCAATCTTCCACAG
GGCTAGTGCACATAGAAAAGGATATAGACTCCCTGACTTCCACGGCCAAC
ACTTACATACTTACTTCAAACACCTTTCAGACATCAGTATACCATTTGCG
TTGGTATTTGGTGGAACTGACGTTCAATGTTCATCCTGGAATGATCAAGA
AAATGCAATCATGGCTGACGTTGTTGCCAAGGCAATGTGAGTTAAAACCC
TAGAAactcaaaaaatctttatttctgTTGCCAAGGGTAACCAAGGCCAA
GGAATCATTTGCATTTGCTAATGATAATAAGGCTCAAGCTTAAGCATTTA
TATAGCTGGTACAGAGAAAATTTGactattttcatgaaatttccaACGAC
GGAAAACAACATTACCTGAAGTGTAACGGAGCTTAACCTTCGATAAGCAT
GTTTTCCCATTGTGTTTCATGCCGAAAACATGTGGCAAATCTTTAAACCT
TTCCCAAGTTTTACATTTACTTTgcgttttatatttttcaaattctggtG
GTAAATGTTACTTTCAATCTATTGTTTGTATGGATTTTTCGTCGCCGTTA
GGTAGGTCCGATCAACAtctagtttgttttttttgtttcgacGGTTTCAC
TTTCACGAGTCTCACTTTATCATTTATACCTTTTCTTTTAGAGTTCTGAT
CGCGTTTTCAGAAGTCATGAAAGAAGCAGCATCGGTCAAATGGGTAGTGT
ATTTGTACATCTATCTTTGAGTGACATATTTTTTCTCATAGAAGACGCTA
CTCGTATATGATTTGTTTAAACTAACCTATTTTCGGTAGCTTTTACTTCA
ACTTATTAAAATTCGAATcacgttttttataataagaaaaaattatataa
gAGCATCCTTATATGCTgtggctaaaatattaagaacaagctaagaacat
tctGAGGAtctgcagactctaaaacactaaatttttaagaaattgcacaa
aatggtgaaattaagaacatttaaaaaaaattaggcttaaaactttGAGA
AtatccgaaggtttcaaaaactgtttttattaaaagaaaacgTATATTTC
ACTAAATTCAGTTTTCATGAAAGGTaatttcttcttcattcttctttcAG
CCATCGATCTTGAAAGAGAAGAAGATATTTGTACAGCCGCAAGGTGAAAG
TCACTCCTTCTTTCTTGCTCCATGCATGTTAAACCACCATGTTGTTCTAA
ATTTTTATTCTATATCCTCAGGAAAACATGCAATTGGCCTTTTACAGTTT
CTCATCAAGTGTAATCCGCCGGCGTgcgaattgagggggccaaaaaatat
gttgcccaccatggttgggcgaagaagaaaattttcgacttttcaccctt
atttcacccctctaaacggtacatataagattttttaaagtaaaaaaaaa
ttatgcccCCACCCCCCTGGTGACTGGGTTTTGATTTGTTTGTAGTAATg
caaagttgtattttttttcgTTGTCAGGTGTGACGATTGAGAAGATAGGA
CCAACAAATTATTCGTTTCAACATCTATTCAATGATAATGGGATGGTGAG
TTTGAACTTTGTCTCTCGATGATGGATTTTTACTTGTCAAGTACCTTTAG
CAAGTTCTGGACAAGTACGGCATGGTaacctttttaatgaaaaaatccaT
TCTTTCTTTGCAGAGCGaagttaaaacaaaagaaaaggtatagattttca
attattttaccTGACTGAAGTTATCACTTTTAAAGATACTTTATTCTCTG
TGTTGGAGCGGATTAGGACTGTACATAGTTTGACCCCTCCCCCTTTCTCC
GCAATCTTTTAAAGGTTGGGAGGTTGCCAAGAATGGGGGAGTCATTTAAG
AAGGAGGGAAATcggacccctttccgcactatgactGCAAGCCTCGAAAT
TGTGATAAAGATTTGGAATTTGCACAGACACTCTTCTATAGGTCATTTCT
CAGTCGCAAACCGTAATGGTTAATCAGAACATATCAGGGCCAgtgcgcgc
taatgacgacttactatggtctaaagttttgaaattttttaaagattatt
gcATCTAGCCAAACAGAAAGCcgttatggaggcgcaatcagtcctgatta
cccatgatccagttcgactgtgaaatggtctATGGAGAAAACGAATATAT
TTTAGAGACTCTTTAAAAGATGTTTGTTGACaaagaattatttatttttg
aacgTTTTTTTCTCTCGAATAGTTCGATTTTTTTCATCACTTCAGATAAT
TTTCCTGTTTGTGGGTGGTATTAGACCGGTGAAAGATCCTTTGTTCCTGA
TTTATACTTTTGCTCGTAAGTGAGTTTATAATTATATATTTTCTAATAAG
AGCAGTGTCCTCTTTTACTTAGATTACCCCGCCCCTCACCGTACCCTTTA
AATTAACTACTTACACTAAGTACAttaattatcatttttcaagtcttgaa
aaagttgaacCATGGAATATTTTACCTTTAAGATAAAGAATATTTGATGT
AAACTGTAGGGTCCAATCCGTCAAAATCAGATTGTTGAATTTGTTGGGGA
ATATTAAAAAAGCATTGTCACTAATAAGGTGCTGCCTTTATTCTGAAACC
GCCGGACTCTacttctttatacctctataaGTTTTGCCCTAATGAGTttt
cataatttatgcaaaaatattcaaatcatGATAATTATTCAGGAAGAACC
CCCATCGACTGAAAGAAAACACTAAAAAAAGAGACTGAAGAggcagaatt
taaaaaaagtgaacaaaGGGACTGGGATGGAGTTTGATTTATTTATAATT
CTTTGTTCAGAGATGCATGAAGAGAATGATCGAATCCTGTTTGTCATCAT
CGGGCCCATACTGGATGAAGAATATGCTCGCAAATGTCGTCTCGCTACAT
CAAAGTAAGAATGTCATACAGTGGAAAGTGAATTCTTGGTGTTTCTCATG
TGGACAGTTTTGTTTAACATTCGGTTTTGTGATAAGCATTTTAATTGGAA
TTTTGActtaactttgctttttgatcatttttgacGACCCTGAGTAGACT
AAGGCCGCTTAATCGCACCATCCGGTCTAGTTAGAACATAGACGTCATAT
CAAATTGCAAAATCCCAAGTCTATTAAAAAGCTGTAAGTAGACCCCGGGC
TAGTTGATTGGTAGATTTGTTTTAGTTGTTTTCATTGGACCTAAAAATCA
CTTCAATCTCATTTTCTCTCTTAAAACACTTGTCTCATCTATAATTCTAG
ttatcattttgtttttttgcagaCTGAAAGGGATATACATGTTTGATCAA
ATATCACGTGATAAAGTTCATGCTTTGATACACCAATCTGTTGCTTTGGT
CAATTCCTCCATCGAAGAAGGCATGGCTGGAGCCATTCTTGAGGTAATGG
TTTCACGAATCTCGATGCACTATTATAGGATTGCAAACACACAATTTTAA
TTCTCACCGCCAAAAGTGCTCAACGAAAGCTCAAAACGttgaaatcatta
aaaaaatagaCATGTGTGACTTTAGGAACTTAAAGTTTCTTGCCGTCCTT
ATGAACGACAATCATtaaccaaaaataaaatcttaaatacaaaatttgga
caaaaaggATTACAAGTAAGAACAAACAAAAAGTATTTGGTGGTCATAAT
AAGCTCAGTCCTCCAGGCACTAATTCGTGCACGTGATATTTTCGGAAAGA
TGCCCAAACCACAAAATAGGATGTTTGATATCTGACCCTTCGATTACTTA
AAACTTgttttacattttaaatttttttttcagtcaatgaAAATAGAGAC
ACCAGTTGTTGTTCGGAATAACCGTGGAAACGCATCCATTGTGCAGCATC
AATCCACTGGATTGCTTTTCCAACACCCACAAGTAGGCTCATTTTTACAT
TACAGATTGGACTTTCTACACTCGATTCGAAACTTAAGATTTAAAATTAG
ATAAGGAATTTTAATTGAACCCACACGGAAGTNAATTGGACACTTAAGAT
TTGAAATTAGATATGGAATTTTAACCGAATCTACACGGAAGTCATTTGAC
TGATCATGATCTGTGTATTTCGCCCTTGTGCTTTACTTGGgaaaatttaa
aagatattctttgaaagATCACAGAGCTGTGAATCGTCGTGATTCTCTTT
CACATGGATGTTgaactcaaaaattatcaactatCTTTTCTTCAACTTTA
GTGCTGAATTTAATTGTATTACGGCCACTTTATTTATCGAAATGCAAGGT
CTTTCATTATCCCATAGCAACAGGTCATTCATTCTGTGTAAGTGTGGAAC
AATCAGAAACTGCTTTGAGATTAGGTCTCTCTTGAGTTACGTCAACCTTT
TTGTTTNAGAAACTGCTTTGAGATTAAGTCTCTCTTGAGTTACGtaaacc
tttttgtttcatctGGAAACAGACCTTCAATCTTTAGGCCAACGTACCTC
TAAGAAATTCCGTTGGAAATAAATTGTCATAATATATTTCGAAAATGAGG
TGCGAATTGTTCACGGcttgatttctaaaaaaggcCTATACAGTATCTTT
CGAAAATTCATAAAAgtctctctctttttttttaggattttagagaGCAA
GCCAATCTTCTTTTGGAAAACTCAACCCTGCGTAGAAACCTCATTCAAAA
CGCACAAGATTTCATCGAGTCCAATCACAACCCTGATGTTGAACGTTCTA
CCTATcacgaaattatcaaaattcttGTCAAACCGTAGTAATTaacaaat
acacgtttttttataagagaatccaaaatttttgaagcctttg

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_010638	XLOC_010638	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000314	supercontig	sc0000314:194174..205366 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0252626	0.0121567	0	0.334228	0	0.527219	1.95455	0.502161	4.24139	2.71063	0.397166	2.32756	2.9225	1.26165	0	0	0	0	0	0	0	2.13122	0	0	4.58531	0.000967646	1.03681e-08	0	0	0

Blast

[Close]

BLAST of TCONS_00018979 vs. Swiss-Prot (Human)
Match: GL1D1 (Glycosyltransferase 1 domain-containing protein 1 OS=Homo sapiens GN=GLT1D1 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 3.757e-72
Identity = 117/343 (34.11%), Postives = 196/343 (57.14%), Query Frame = 2

Query:  230 ILILAKLGAGTGNRTTAERIRQHLNNSDLCPLLCDVTQFRSPRDLSDYVIHNDVTCLIVIHAYRAGKFLNDISIPFALVFGGTDVQCSSWNDQENAIMADVVAKAIVLIAFSEVMKEAASVKWPSILKEKKIFVQPQGVTIERIGPTNYSFQHLFNDNGMSEVKTKEKIIFLFVGGIRPVKDPLFLIYTFAQMHEENDRILFVIIGPILDEEYARKCRLATSKLKGIYMFDQISRDKVHALIHQSVALVNSSIEEGMAGAILESMKIETPVVVRNNRGNASIVQHQSTGLLFQHPQDFREQANLLLENSTLRRNLIQNAQDFIESNHNPDVERSTYHEIIKIL 1258
            +L LA L   TGN  TA+R+R HL  +    +L D   F S  ++++ ++  +    + +H YR G+ L    IPF ++FGGTDV   +   ++N +M  V+ +A   +AF+E MKE A  +WP    + K++VQ QG+        N++    F              IFL + G+R VKDPL+L+  F+  H+E   +  VI+GP +D  + R+ +    +  G+ +  ++ ++ +HA++    A+VNSS+ EGM+ AILE+M +E PV+ RN  GNA++V+H+ TGLLF +PQ+F   A  L+ +  L + ++ N ++++   H+  VER TY ++I+ L
Sbjct:    3 LLFLAVLRPHTGNAVTAQRVRAHLEAAGHVCVLKDAFDFESRSEIANLILAENCEAALALHLYRGGRLLQGHRIPFGVIFGGTDVNEDANQAEKNTVMGRVLEEARFAVAFTESMKEMAQAQWPH--AKGKVYVQSQGIATTPNAAFNWN---TFLQRSEINQSADNLHIFLLICGLRQVKDPLYLVDAFSAWHQEEPNVHLVIVGPEVDPVFTREVKAKVKRAAGVRLIGEMPQEDLHAVVKNCFAVVNSSVSEGMSAAILEAMDLEVPVLARNIPGNAAVVKHEVTGLLFSNPQEFVHLAKRLVSDPALEKEIVVNGREYVRMYHSWQVERDTYQQLIRKL 340

The following BLAST results are available for this feature:

BLAST of TCONS_00018979 vs. Swiss-Prot (Human)

BLAST of TCONS_00018979 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GL1D1	3.757e-72	34.11	Glycosyltransferase 1 domain-containing protein 1 ...	[more]

You are here

TCONS_00018979 (transcript) - C. hemisphaerica