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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019015 ID=TCONS_00019015|Name=TCONS_00019015|organism=Clytia hemisphaerica|type=transcript|length=1376bp
TGGGATCCTGGAAGATACCTGAAAGTACCAGTGGACAAGGGGATGATACA
ACCTCAGGGGTGTTTAATAACATCTTTAAAAGAAACAGTTTATGGCCCCC
GGCGTGCAaatcgaattgagggggccaaaaaaatatgtcgcccaccatgg
ttggtcgacgaagaaaattttcgacttttcaacCTTGTTTCCCCcctcta
aaaaaaatttttaaagtaaaaaaaaattactttgcaaaataaTGGGGAAG
GGGGGGCATGCAGTTAGGAGGTAATTAGTCTCctgggcccggttgttcaa
aagttgACTAAATTAAATCCTGATTAGCGCTAATCGCGATTAGATTTCGA
TTAGTTAATCCCGGCGATTAACTTCCGTTGTTCGAACGTCAGATTAACTA
TTCATGGACATTTTGcctgtgttttcaaaaatcttaatcttgacgtcact
tttcgaatgttttcaaaacattcgaaaatcttttttcgttcgaatttctc
actTCAATGCAGTGACTTcacttttttgtaagaaaaagtttcttaatccT
CGTTAATCCTGGGTCAGAGCAGGATTAAAATTTGGCCAATTTAATCGGTA
TATAATCCAGATCTAAGCCCAATTTTTTCGAACAACCGACGGTTCTGTGT
TATTCGACGCTAACCGAGATTTAATCGAAAATTAAGCTAATCGGCcgcta
atccacttttgaacaaccggctGCAGGTTAGCCATTAAGGGTTTTTAGAA
GTCTGGGTTGGGTGGGGTACGAACTACCCGCTGACAGCATTAGGGATAAA
ATTGACCCATGAAATCAGAGAGATGTTATAGTTAGAAAGAGTCACAATgg
ctttttctattgttctagcCGTATTTTTCAACTGGTGGTCTattcattat
tatttttcttgtgTATTGTAGATTTTGATTGACAACACCCTGACGACGTT
ATTTTGAAGTTATTTTTGGTTCCTCGGGGGGGTATGATGCTTATTTTGAA
ACACACAAAGGTCATGATAACATCAGGTGTGGGACTTCCAATGCCAAGAG
TTTCAATCTTAATTAAGCCATTCCTTCCTGAAATTCGTTCATTTTTGAAG
GGAAACCATTTGTTGCGTTATCTGGTTTCAATAAACAGTTGAGATGACAA
GGTTTTTGAGTAGAGGGCCATGATTTCAACAACTCCATTAactcaccact
cgtttttgtgatcttatatagacctaattgatcatttaaaaaagttagtt
tgcttttaacaagtctgtgcacacgaagaacATTGTAGCTCTCATTACAC
TGTTGATTCTTGTATGCTCATGATGTTGGAATTCCAGGAAACACAGGAAA
AGTAAATTCGTAGAAGTGAACTTCAG Run BLAST on NCBI transcript from alignment at sc0000314:126554..127929 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019015 ID=TCONS_00019015|Name=TCONS_00019015|organism=Clytia hemisphaerica|type=transcript|length=1376bp|location=Sequence derived from alignment at sc0000314:126554..127929 (Clytia hemisphaerica)
CTGAAGTTCACTTCTACGAATTTACTTTTCCTGTGTTTCCTGGAATTCCA
ACATCATGAGCATACAAGAATCAACAGTGTAATGAGAGCTACAATgttct
tcgtgtgcacagacttgttaaaagcaaactaacttttttaaatgatcaat
taggtctatataagatcacaaaaacgagtggtgagtTAATGGAGTTGTTG
AAATCATGGCCCTCTACTCAAAAACCTTGTCATCTCAACTGTTTATTGAA
ACCAGATAACGCAACAAATGGTTTCCCTTCAAAAATGAACGAATTTCAGG
AAGGAATGGCTTAATTAAGATTGAAACTCTTGGCATTGGAAGTCCCACAC
CTGATGTTATCATGACCTTTGTGTGTTTCAAAATAAGCATCATACCCCCC
CGAGGAACCAAAAATAACTTCAAAATAACGTCGTCAGGGTGTTGTCAATC
AAAATCTACAATAcacaagaaaaataataatgaatAGACCACCAGTTGAA
AAATACGgctagaacaatagaaaaagccATTGTGACTCTTTCTAACTATA
ACATCTCTCTGATTTCATGGGTCAATTTTATCCCTAATGCTGTCAGCGGG
TAGTTCGTACCCCACCCAACCCAGACTTCTAAAAACCCTTAATGGCTAAC
CTGCagccggttgttcaaaagtggattagcgGCCGATTAGCTTAATTTTC
GATTAAATCTCGGTTAGCGTCGAATAACACAGAACCGTCGGTTGTTCGAA
AAAATTGGGCTTAGATCTGGATTATATACCGATTAAATTGGCCAAATTTT
AATCCTGCTCTGACCCAGGATTAACGAggattaagaaactttttcttaca
aaaaagtgAAGTCACTGCATTGAagtgagaaattcgaacgaaaaaagatt
ttcgaatgttttgaaaacattcgaaaagtgacgtcaagattaagattttt
gaaaacacaggCAAAATGTCCATGAATAGTTAATCTGACGTTCGAACAAC
GGAAGTTAATCGCCGGGATTAACTAATCGAAATCTAATCGCGATTAGCGC
TAATCAGGATTTAATTTAGTcaacttttgaacaaccgggcccagGAGACT
AATTACCTCCTAACTGCATGCCCCCCCTTCCCCAttattttgcaaagtaa
tttttttttactttaaaaattttttttagaggGGGGAAACAAGgttgaaa
agtcgaaaattttcttcgtcgaccaaccatggtgggcgacatattttttt
ggccccctcaattcgattTGCACGCCGGGGGCCATAAACTGTTTCTTTTA
AAGATGTTATTAAACACCCCTGAGGTTGTATCATCCCCTTGTCCACTGGT
ACTTTCAGGTATCTTCCAGGATCCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019015-exon-sc0000314-1491911889:126554..127929 | TCONS_00019015-exon-sc0000314-1491911889:126554..127929 | Clytia hemisphaerica | exon |
| TCONS_00019015-exon-sc0000314-1510915933:126554..127929 | TCONS_00019015-exon-sc0000314-1510915933:126554..127929 | Clytia hemisphaerica | exon |
| TCONS_00019015-exon-sc0000314-1575043694:126554..127929 | TCONS_00019015-exon-sc0000314-1575043694:126554..127929 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000314 | supercontig | sc0000314:126554..127929 . |
Blast
The following BLAST results are available for this feature:
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