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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019123 ID=TCONS_00019123|Name=TCONS_00019123|organism=Clytia hemisphaerica|type=transcript|length=258bp
AGATGTTGTTATAGAAAACTTCTTAATCGAAAGACTTATTAACAAGAGAC
ACGTGTTGACAATTTATACTGCAGAGAAACAGAGTTGTCGTCattttatc
atatttcaaaagaaCGGGCAGCAATTCCTTGCCAGTGAACCGGAGCCGAA
ATTCACAAAGATTGGTGATCTTATACGGTATTATATGAAAAACAATCTAC
CAACTTGTAAAATTCGCTTAAAGCAACCCTACTCTTAGTTTTGTATGTGA
TAACGTAT Run BLAST on NCBI transcript from alignment at sc0000319:266195..267406- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019123 ID=TCONS_00019123|Name=TCONS_00019123|organism=Clytia hemisphaerica|type=transcript|length=1212bp|location=Sequence derived from alignment at sc0000319:266195..267406- (Clytia hemisphaerica)
AGATGTTGTTATAGAAAACTTCTTAATCGAAAGACTTATTAACAAGGTAT
TTGTGGTTTGTTTCTTATGACATTGTCAATATACTACACTTTACATGAAA
CCTCATATGAGAAGATGTTTCATAGTATTTTTGGTGAATTATTGTATGTT
TTCCTTCACCAAAAATCTGAGAAAGGATTTGGTCTGAGTTTTAAAGTTAG
ATTTCAGCTTTGATGATTTGAAGGGAGCTCATGAAATAACCTTCTCATGG
ATTTCTCTTTACAGAGACACGTGTTGACAATTTATACTGCAGAGAAACAG
AGTTGTCGTCATTTTATCATATTTCAAAAGAACGTAAGTTCTCCATTTTG
CCTTTTTGTCTTAAATAAAAAGTCTATTTGTGTAAGATGAAACTGTAGTT
TTATCATTTCATTGTCTACTTAAGTTTACCTCCTTATAAGCTAGCTATAT
ACTCTGCTGTTGAAAAGTTTTCCTTGTATGCAAGAATGCATGTATCCAGA
AATTGTTAACCAGTTTGAGTAAGAATAAAACTCAAAGCTTGGAGCATTTA
TTATCTTTCACAAAAATCATATGAAAAGTAGTTTCAGTTTGTCCCTCATT
GAAATAGATTTGTCGTGTTTTATTATTGTTGTTGTACGAATCATTTATTC
AACAAATGCGTAATGATCGTCACTATGCGGGAATCAACTTTCCATTCTAA
TATTCTTTGACAACCACAGTGTAACTGATTCTTCAAGTTTACACGTTCTT
TCTTTATAAGAACAAACTTTATAAGAACATAAGGCTGGCCAAAATGTTAA
GAACAAGTTAAGAACATTTTAAGTCTTTGTAGACTCAAAACACCCTATTT
CTTAGGAAAATTAAAAACTCAAAAAGTCAAGAATTTTTGATGCTCTTATA
AAAAACGCGCATTCGCTTTAATGATCAATAGGGGACTTCAAGGTCATGAG
AGAGTTTTGTCCTGCATTTCAAATTCACTTTTCCTCCTACTTGGAGAAAA
AGATTAACTAGTCTTCTTGTAAAAGAGTGTCCTTCAATACTCCATATCTT
TGATTGTTTCGTTTTTCAGGGGCAGCAATTCCTTGCCAGTGAACCGGAGC
CGAAATTCACAAAGATTGGTGATCTTATACGGTATTATATGAAAAACAAT
CTACCAACTTGTAAAATTCGCTTAAAGCAACCCTACTCTTAGTTTTGTAT
GTGATAACGTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019123-exon-sc0000319-1575043694:267361..267406 | TCONS_00019123-exon-sc0000319-1575043694:267361..267406 | Clytia hemisphaerica | exon |
| TCONS_00019123-exon-sc0000319-1575043694:267074..267142 | TCONS_00019123-exon-sc0000319-1575043694:267074..267142 | Clytia hemisphaerica | exon |
| TCONS_00019123-exon-sc0000319-1575043694:266195..266337 | TCONS_00019123-exon-sc0000319-1575043694:266195..266337 | Clytia hemisphaerica | exon |
| TCONS_00019123-exon-sc0000319-1510915933:267361..267406 | TCONS_00019123-exon-sc0000319-1510915933:267361..267406 | Clytia hemisphaerica | exon |
| TCONS_00019123-exon-sc0000319-1510915933:267074..267142 | TCONS_00019123-exon-sc0000319-1510915933:267074..267142 | Clytia hemisphaerica | exon |
| TCONS_00019123-exon-sc0000319-1510915933:266195..266337 | TCONS_00019123-exon-sc0000319-1510915933:266195..266337 | Clytia hemisphaerica | exon |
| TCONS_00019123-exon-sc0000319-1491911889:267361..267406 | TCONS_00019123-exon-sc0000319-1491911889:267361..267406 | Clytia hemisphaerica | exon |
| TCONS_00019123-exon-sc0000319-1491911889:267074..267142 | TCONS_00019123-exon-sc0000319-1491911889:267074..267142 | Clytia hemisphaerica | exon |
| TCONS_00019123-exon-sc0000319-1491911889:266195..266337 | TCONS_00019123-exon-sc0000319-1491911889:266195..266337 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000319 | supercontig | sc0000319:266195..267406 - |
Blast
The following BLAST results are available for this feature:
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