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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019134 ID=TCONS_00019134|Name=TCONS_00019134|organism=Clytia hemisphaerica|type=transcript|length=1368bp
GTAAAATTAAGACGAGGTCTCATAATGTCATCAAATGGTTCTGTAGAATC
AACACTGGTGGATTTGATTGACCCTCCCTTAAGCATTATTTTTGGTATAA
TAATGTGTACATTTGGTATTCTCTGCATCGTTGGCAATTCCCTGGCAATC
GTTGTCTTATTGCGAACAAAGAACACTAATTTCTCCACCAGACAAGCTTC
AACTTGGATTTTATTCAATTTAACATTATCAGGTGTTTTCATTGGTGGTA
TATGGTCTCCGGTGTGTGTCATACAACTCTTAAGTGAACATTTACGGAAA
AACATAACTATTGAAACTGTACGCCGCTTCTTAGGAATCAGTTTACCAGG
AGCTTTCATATGTTTCATCGTTTGTATCAGTTATGATCGATATTTACTGC
TGAAACATAGTAACAACCACAATATGCATATGACACGACGCAAATCCATC
GCCGTTATTATCTTATCCTGGATTATACCCTTACCAGTCTTGTTCTTAAG
ATATCTGAATAAAGCATTATTCCGTTTCTTTGTTGTATTGTTCATTCTTT
TCGGCTTTCTAACTGTCATTTTTGCTTATGGTTTCATGTNTTGTTGTATT
GTTCATTCTTTTCGGCTTTCTAACTGTTATTTTTGCTTATGGTTTCATGC
TAAGGGTGGTTTGCGAATCTGAGAAACGTATTAAGAGGAACTACACGAAT
GCCGAGAATGCAAGTCCAGCCATGTTGTGTAAACCTACTGGGAAACAGAC
ATCTGGTTCGCAAAGGAAGCGATTCAAAGATCTTAATAAAACTTTAAGAC
TGGCAAAGACAGCTACAGTATTGATGACAACATATCTAGTTTGCCACTTA
CCGCTTGCTTTATTCCTGGTGGTAcaggtcataaaacctgatctatTGAG
CCCATACACAACTCAAATATTTCTATTGGCCACAGAATGTTTATCACAAA
TCAATGCATCCTTAAACCCTGGTATCTATTTTATGACCTGTAAAATCTAT
TTACGGGAAGTCAAGAAATTAATTATGTCAACTTCAACCACAGTGTACGA
TATTCGGACGCCACAATTAGCTATTAGACAGCACAACCAACCACCCGCAG
GTAGAATCACCCATGTGTTACCAGCAGTCGATGTCAGTTTACCAGAGCTG
TTAGCGTTACCAAGAACGAATCAGAATCCATCACCGTCACCTAGAATCAC
CAGGTTCAAGCTAAGCACTCATAAATAGGATTTTTGATATTTAATTAATA
ATTAGAATTTTTGGTCAAATATTGCGCTATATagtaatttgatttttata
aaatagtcgtttttcttctcaaattttGGACAGCGATTCACTGCAAAGCT
AGTAATGTTATAATTAGA Run BLAST on NCBI protein sequence of TCONS_00019134-protein >TCONS_00019134-protein ID=TCONS_00019134-protein|Name=TCONS_00019134-protein|organism=Clytia hemisphaerica|type=polypeptide|length=223bp
VKLRRGLIMSSNGSVESTLVDLIDPPLSIIFGIIMCTFGILCIVGNSLAI
VVLLRTKNTNFSTRQASTWILFNLTLSGVFIGGIWSPVCVIQLLSEHLRK
NITIETVRRFLGISLPGAFICFIVCISYDRYLLLKHSNNHNMHMTRRKSI
AVIILSWIIPLPVLFLRYLNKALFRFFVVLFILFGFLTVIFAYGFMXCCI
VHSFRLSNCYFCLWFHAKGGLRI Run BLAST on NCBI transcript from alignment at sc0000319:44865..46232 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019134 ID=TCONS_00019134|Name=TCONS_00019134|organism=Clytia hemisphaerica|type=transcript|length=1368bp|location=Sequence derived from alignment at sc0000319:44865..46232 (Clytia hemisphaerica)
TCTAATTATAACATTACTAGCTTTGCAGTGAATCGCTGTCCaaaatttga
gaagaaaaacgactattttataaaaatcaaattactATATAGCGCAATAT
TTGACCAAAAATTCTAATTATTAATTAAATATCAAAAATCCTATTTATGA
GTGCTTAGCTTGAACCTGGTGATTCTAGGTGACGGTGATGGATTCTGATT
CGTTCTTGGTAACGCTAACAGCTCTGGTAAACTGACATCGACTGCTGGTA
ACACATGGGTGATTCTACCTGCGGGTGGTTGGTTGTGCTGTCTAATAGCT
AATTGTGGCGTCCGAATATCGTACACTGTGGTTGAAGTTGACATAATTAA
TTTCTTGACTTCCCGTAAATAGATTTTACAGGTCATAAAATAGATACCAG
GGTTTAAGGATGCATTGATTTGTGATAAACATTCTGTGGCCAATAGAAAT
ATTTGAGTTGTGTATGGGCTCAatagatcaggttttatgacctgTACCAC
CAGGAATAAAGCAAGCGGTAAGTGGCAAACTAGATATGTTGTCATCAATA
CTGTAGCTGTCTTTGCCAGTCTTAAAGTTTTATTAAGATCTTTGAATCGC
TTCCTTTGCGAACCAGATGTCTGTTTCCCAGTAGGTTTACACAACATGGC
TGGACTTGCATTCTCGGCATTCGTGTAGTTCCTCTTAATACGTTTCTCAG
ATTCGCAAACCACCCTTAGCATGAAACCATAAGCAAAAATAACAGTTAGA
AAGCCGAAAAGAATGAACAATACAACAANACATGAAACCATAAGCAAAAA
TGACAGTTAGAAAGCCGAAAAGAATGAACAATACAACAAAGAAACGGAAT
AATGCTTTATTCAGATATCTTAAGAACAAGACTGGTAAGGGTATAATCCA
GGATAAGATAATAACGGCGATGGATTTGCGTCGTGTCATATGCATATTGT
GGTTGTTACTATGTTTCAGCAGTAAATATCGATCATAACTGATACAAACG
ATGAAACATATGAAAGCTCCTGGTAAACTGATTCCTAAGAAGCGGCGTAC
AGTTTCAATAGTTATGTTTTTCCGTAAATGTTCACTTAAGAGTTGTATGA
CACACACCGGAGACCATATACCACCAATGAAAACACCTGATAATGTTAAA
TTGAATAAAATCCAAGTTGAAGCTTGTCTGGTGGAGAAATTAGTGTTCTT
TGTTCGCAATAAGACAACGATTGCCAGGGAATTGCCAACGATGCAGAGAA
TACCAAATGTACACATTATTATACCAAAAATAATGCTTAAGGGAGGGTCA
ATCAAATCCACCAGTGTTGATTCTACAGAACCATTTGATGACATTATGAG
ACCTCGTCTTAATTTTAC Coding sequence (CDS) from alignment at sc0000319:44865..46232 >TCONS_00019134 ID=TCONS_00019134|Name=TCONS_00019134|organism=Clytia hemisphaerica|type=CDS|length=672bp|location=Sequence derived from alignment at sc0000319:44865..46232 (Clytia hemisphaerica)
TCAGATTCGCAAACCACCCTTAGCATGAAACCATAAGCAAAAATAACAGT
TAGAAAGCCGAAAAGAATGAACAATACAACAANACATGAAACCATAAGCA
AAAATGACAGTTAGAAAGCCGAAAAGAATGAACAATACAACAAAGAAACG
GAATAATGCTTTATTCAGATATCTTAAGAACAAGACTGGTAAGGGTATAA
TCCAGGATAAGATAATAACGGCGATGGATTTGCGTCGTGTCATATGCATA
TTGTGGTTGTTACTATGTTTCAGCAGTAAATATCGATCATAACTGATACA
AACGATGAAACATATGAAAGCTCCTGGTAAACTGATTCCTAAGAAGCGGC
GTACAGTTTCAATAGTTATGTTTTTCCGTAAATGTTCACTTAAGAGTTGT
ATGACACACACCGGAGACCATATACCACCAATGAAAACACCTGATAATGT
TAAATTGAATAAAATCCAAGTTGAAGCTTGTCTGGTGGAGAAATTAGTGT
TCTTTGTTCGCAATAAGACAACGATTGCCAGGGAATTGCCAACGATGCAG
AGAATACCAAATGTACACATTATTATACCAAAAATAATGCTTAAGGGAGG
GTCAATCAAATCCACCAGTGTTGATTCTACAGAACCATTTGATGACATTA
TGAGACCTCGTCTTAATTTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019134-exon-sc0000319-1491911889:44865..46232 | TCONS_00019134-exon-sc0000319-1491911889:44865..46232 | Clytia hemisphaerica | exon |
| TCONS_00019134-exon-sc0000319-1510915933:44865..46232 | TCONS_00019134-exon-sc0000319-1510915933:44865..46232 | Clytia hemisphaerica | exon |
| TCONS_00019134-exon-sc0000319-1575043694:44865..46232 | TCONS_00019134-exon-sc0000319-1575043694:44865..46232 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000319 | supercontig | sc0000319:44865..46232 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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