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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019144 ID=TCONS_00019144|Name=TCONS_00019144|organism=Clytia hemisphaerica|type=transcript|length=726bp
CTGTTGTAAGAGGAGACATTCAAGCAATTCAATCCCATACAATGCAACAT
CTTCTTCAAACATACAAATCTCaatgcttttaatgatcacttTAGTGAAA
TTCAACATATTATTGACAGGGTTTTGATCcgtcaaatcaaaatgagataa
TCTCTTGAAAAATTGCACCAAGAAGTTCAACAGAATGACAACAATGCTTG
TTTCTGCATTCTCTTCCCCAGTTAGACACTTTTCTAGTTCATTCAGTAGC
AATGTCTGAAGGTCAAATTCAAAGTCCAACTCATAAAAAAAGGTTCTTGA
AAACTGGCGAAAGTCATCTTTGTCTTGACAATATTCCAATATCTTGGTTA
ATACACAAATAGCAAGCTCAACATTAGTAGTAGATATTTCCCGGTATAGT
ATATTTAAGTAGGGTTTTTTCATCAGCATTGGATATAAACAATGAGGAAG
ATCATCAGAAGTGCCCTCAATACTTAATATATCTTCAAGTACTTTTGATA
TACATGTCAGATTATTGTTTAAAGTTAATTTGTTCAAAAGATCTGCGACA
GCCTCCTGTTGCTCTTCTATAATTTGTATTCTTTCAGGGTTTAAAACATC
AATGGGAGGGATCGGGTATGTCTTGATTGCCCAAATTCTCCACTTGTAAC
AAAGTGTCCAGTATTCCATCCGCACATTCACCCATCCCGCCTCAAATTCa
aattgtttcctttttttttcttacca Run BLAST on NCBI protein sequence of TCONS_00019144-protein >TCONS_00019144-protein ID=TCONS_00019144-protein|Name=TCONS_00019144-protein|organism=Clytia hemisphaerica|type=polypeptide|length=223bp
MEYWTLCYKWRIWAIKTYPIPPIDVLNPERIQIIEEQQEAVADLLNKLTL
NNNLTCISKVLEDILSIEGTSDDLPHCLYPMLMKKPYLNILYREISTTNV
ELAICVLTKILEYCQDKDDFRQFSRTFFYELDFEFDLQTLLLNELEKCLT
GEENAETSIVVILLNFLVQFFKRLSHFDLTDQNPVNNMLNFTKVIIKSIE
ICMFEEDVALYGIELLECLLLQQ Run BLAST on NCBI transcript from alignment at sc0000319:294956..295681 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019144 ID=TCONS_00019144|Name=TCONS_00019144|organism=Clytia hemisphaerica|type=transcript|length=726bp|location=Sequence derived from alignment at sc0000319:294956..295681 (Clytia hemisphaerica)
tggtaagaaaaaaaaaggaaacaatttGAATTTGAGGCGGGATGGGTGAA
TGTGCGGATGGAATACTGGACACTTTGTTACAAGTGGAGAATTTGGGCAA
TCAAGACATACCCGATCCCTCCCATTGATGTTTTAAACCCTGAAAGAATA
CAAATTATAGAAGAGCAACAGGAGGCTGTCGCAGATCTTTTGAACAAATT
AACTTTAAACAATAATCTGACATGTATATCAAAAGTACTTGAAGATATAT
TAAGTATTGAGGGCACTTCTGATGATCTTCCTCATTGTTTATATCCAATG
CTGATGAAAAAACCCTACTTAAATATACTATACCGGGAAATATCTACTAC
TAATGTTGAGCTTGCTATTTGTGTATTAACCAAGATATTGGAATATTGTC
AAGACAAAGATGACTTTCGCCAGTTTTCAAGAACCTTTTTTTATGAGTTG
GACTTTGAATTTGACCTTCAGACATTGCTACTGAATGAACTAGAAAAGTG
TCTAACTGGGGAAGAGAATGCAGAAACAAGCATTGTTGTCATTCTGTTGA
ACTTCTTGGTGCAATTTTTCAAGAGAttatctcattttgatttgacgGAT
CAAAACCCTGTCAATAATATGTTGAATTTCACTAaagtgatcattaaaag
cattGAGATTTGTATGTTTGAAGAAGATGTTGCATTGTATGGGATTGAAT
TGCTTGAATGTCTCCTCTTACAACAG Coding sequence (CDS) from alignment at sc0000319:294956..295681 >TCONS_00019144 ID=TCONS_00019144|Name=TCONS_00019144|organism=Clytia hemisphaerica|type=CDS|length=669bp|location=Sequence derived from alignment at sc0000319:294956..295681 (Clytia hemisphaerica)
ATGGAATACTGGACACTTTGTTACAAGTGGAGAATTTGGGCAATCAAGAC
ATACCCGATCCCTCCCATTGATGTTTTAAACCCTGAAAGAATACAAATTA
TAGAAGAGCAACAGGAGGCTGTCGCAGATCTTTTGAACAAATTAACTTTA
AACAATAATCTGACATGTATATCAAAAGTACTTGAAGATATATTAAGTAT
TGAGGGCACTTCTGATGATCTTCCTCATTGTTTATATCCAATGCTGATGA
AAAAACCCTACTTAAATATACTATACCGGGAAATATCTACTACTAATGTT
GAGCTTGCTATTTGTGTATTAACCAAGATATTGGAATATTGTCAAGACAA
AGATGACTTTCGCCAGTTTTCAAGAACCTTTTTTTATGAGTTGGACTTTG
AATTTGACCTTCAGACATTGCTACTGAATGAACTAGAAAAGTGTCTAACT
GGGGAAGAGAATGCAGAAACAAGCATTGTTGTCATTCTGTTGAACTTCTT
GGTGCAATTTTTCAAGAGAttatctcattttgatttgacgGATCAAAACC
CTGTCAATAATATGTTGAATTTCACTAaagtgatcattaaaagcattGAG
ATTTGTATGTTTGAAGAAGATGTTGCATTGTATGGGATTGAATTGCTTGA
ATGTCTCCTCTTACAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019144-exon-sc0000319-1491911889:294956..295681 | TCONS_00019144-exon-sc0000319-1491911889:294956..295681 | Clytia hemisphaerica | exon |
| TCONS_00019144-exon-sc0000319-1510915933:294956..295681 | TCONS_00019144-exon-sc0000319-1510915933:294956..295681 | Clytia hemisphaerica | exon |
| TCONS_00019144-exon-sc0000319-1575043694:294956..295681 | TCONS_00019144-exon-sc0000319-1575043694:294956..295681 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000319 | supercontig | sc0000319:294956..295681 . |
Blast
The following BLAST results are available for this feature:
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