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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019152 ID=TCONS_00019152|Name=TCONS_00019152|organism=Clytia hemisphaerica|type=transcript|length=2111bp
ATGGCgggcatgtaaaatacaaatttatgaGAAACTTAAGGGAATTGAAG
CAGTACGACAAGTACGCCAACATGAGCATCACAGACgatttaaaaataat
ggaaagagACCAAGTAAAAGAATGGAGAAGTAAAGCAAACGAGAGAAATC
GAGCAATGCCGCAGAGCGATTACAAATGGAGAGTGCGAGGAAGTCCTCAA
GGaggattatatttaaaaaagatattttgtcaATCAAGATCGGTTTAGTA
Acctttgtaataaaccaaaccaatgtatgagcgatttatagaggcccatg
tgcatgcacggtggcctggaaatatgtaaaacattattattattaagaaT
ATCAGGCTTGGATAACCAAActttcatactaggcttttaggggcagTTTA
AAACTAGGGGGCTATTcttgtaccaccccttaacttttgatctagtgtgt
ctttttaaaggaaatttgGCAACACTTGTCATATAAGTTATAATATATGA
AATGTTTAGGTGTCAAAtgtttaggtgtcaaattttttattttgaagcta
aataaaagttaggaatttacagaaaatttcatctcaaaagctctattatt
tcagaagCTATTAACAATAGTTTCACCCCATAACAGAAGCAACCTggccc
ctagtacgaataggatTAGGTTTGTACAGAATATGGTATTTTTTTCTGGT
AGTTTTGATTGTCAAAAGGAACAGCCaaaaacatgtgcctaaaatgGACG
TTGTAGGGGTAcaatttaaagggacataacatcGATAatagtacttgcga
aatttgtaaacaaactgtttgcagcggatacaaaatcaaaccaaatatgg
caaaatttgattgttcaattgttttacaaatttgttttggacacgtgatt
ttacaattgttctctttaatgacacgtggttcgcgcaatgtttacatttt
actactttaatgtctccctgaacaattaaaattagccatatttggtttga
ttttttattttgacatgtgacatttgttttgattttgtatccgcatacag
tttgtttacaaatttcgcaagtactgttatgtccctttaagaaaCACCAA
TCACTCCTAAGTCTGGAGACATCAAGGTAGatgttaaaagacttgtaaat
ctcgaactatACTGGCTTATTCTCCatgactttggttgtgggaggggcaa
tttaaaacaataaaatgaaacCGTGTCAGCTAAACTATGCATCTGagttt
gtatttgaatttgtattttattcgggtagttttgatcaCCACAACTAATT
CAACAGCCAGAAAAATGTGCCTAAAATGGTATTACTGTAGTAGGTGTAAA
GTTAAATAGAGCTAAGACCAAGTTAAGGAGATTGGCTCTGCGGATGAAAG
TGTCGCACAGAAATCCTCACAAAATGGGGGAGCAATAATAATACAAATTT
GTTGTATATCTCCATTCAGAAAACATAGCGGTATGGCAGAATTTGCCTTC
CTTTCTTATTTCAAATTCATGAAAAACTCTGATTTGTAGGATGTATAAAC
TTTGAAACAGTACAAACTGTGACTGAGGAAGATTTTCACCAAGGTCAGTC
CAAATCACTTTGTACCCGTAAATTTGGTCTATTTTTAGGAGCAGCCGTCT
GAAGAATGTGCTatagtagcgttgacttttttGTGTCACGGAGTTTAGGG
AGTACTTTTCATCTGATTAATCAAGGAAAAGACCATTATCGGTTCAATCT
TCTGCTAGTGATAAATTTTTGCTAAGGCATCCGTCAAAGCTAgcactgaa
aatattctttgaaaCTAACGAAGTAACATAATTTTGACTTAATCTCAAAT
TCTTTAGAAACCACTTCCACTCTCATCATGCTATATCAGATCAACATGAA
ATGTTTGAGTTTTAGGGATATTTAGCAATCTTTTGTTAACCAACCTTATC
TTATTTATAtgagttacacgtttttttttataagaacaaactatataaga
acaaaaggcttcgaggcccaaaaatttaagaacattctaagaacattcta
aggctttggagacttaaaaacatgcattttcttaagaaattacatcaaaa
tgctcaaaaag Run BLAST on NCBI transcript from alignment at sc0000319:341256..343366 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019152 ID=TCONS_00019152|Name=TCONS_00019152|organism=Clytia hemisphaerica|type=transcript|length=2111bp|location=Sequence derived from alignment at sc0000319:341256..343366 (Clytia hemisphaerica)
ctttttgagcattttgatgtaatttcttaagaaaatgcatgtttttaagt
ctccaaagccttagaatgttcttagaatgttcttaaatttttgggcctcg
aagccttttgttcttatatagtttgttcttataaaaaaaaacgtgtaact
caTATAAATAAGATAAGGTTGGTTAACAAAAGATTGCTAAATATCCCTAA
AACTCAAACATTTCATGTTGATCTGATATAGCATGATGAGAGTGGAAGTG
GTTTCTAAAGAATTTGAGATTAAGTCAAAATTATGTTACTTCGTTAGttt
caaagaatattttcagtgcTAGCTTTGACGGATGCCTTAGCAAAAATTTA
TCACTAGCAGAAGATTGAACCGATAATGGTCTTTTCCTTGATTAATCAGA
TGAAAAGTACTCCCTAAACTCCGTGACACaaaaaagtcaacgctactatA
GCACATTCTTCAGACGGCTGCTCCTAAAAATAGACCAAATTTACGGGTAC
AAAGTGATTTGGACTGACCTTGGTGAAAATCTTCCTCAGTCACAGTTTGT
ACTGTTTCAAAGTTTATACATCCTACAAATCAGAGTTTTTCATGAATTTG
AAATAAGAAAGGAAGGCAAATTCTGCCATACCGCTATGTTTTCTGAATGG
AGATATACAACAAATTTGTATTATTATTGCTCCCCCATTTTGTGAGGATT
TCTGTGCGACACTTTCATCCGCAGAGCCAATCTCCTTAACTTGGTCTTAG
CTCTATTTAACTTTACACCTACTACAGTAATACCATTTTAGGCACATTTT
TCTGGCTGTTGAATTAGTTGTGGtgatcaaaactacccgaataaaataca
aattcaaatacaaactCAGATGCATAGTTTAGCTGACACGgtttcatttt
attgttttaaattgcccctcccacaaccaaagtcatGGAGAATAAGCCAG
TatagttcgagatttacaagtcttttaacatCTACCTTGATGTCTCCAGA
CTTAGGAGTGATTGGTGtttcttaaagggacataacagtacttgcgaaat
ttgtaaacaaactgtatgcggatacaaaatcaaaacaaatgtcacatgtc
aaaataaaaaatcaaaccaaatatggctaattttaattgttcagggagac
attaaagtagtaaaatgtaaacattgcgcgaaccacgtgtcattaaagag
aacaattgtaaaatcacgtgtccaaaacaaatttgtaaaacaattgaaca
atcaaattttgccatatttggtttgattttgtatccgctgcaaacagttt
gtttacaaatttcgcaagtactatTATCgatgttatgtccctttaaattg
TACCCCTACAACGTCcattttaggcacatgtttttGGCTGTTCCTTTTGA
CAATCAAAACTACCAGAAAAAAATACCATATTCTGTACAAACCTAatcct
attcgtactaggggccAGGTTGCTTCTGTTATGGGGTGAAACTATTGTTA
ATAGcttctgaaataatagagcttttgagatgaaattttctgtaaattcc
taacttttatttagcttcaaaataaaaaatttgacacctaaacaTTTGAC
ACCTAAACATTTCATATATTATAACTTATATGACAAGTGTTGCcaaattt
cctttaaaaagacacactagatcaaaagttaaggggtggtacaagAATAG
CCCCCTAGTTTTAAActgcccctaaaagcctagtatgaaagTTTGGTTAT
CCAAGCCTGATAttcttaataataataatgttttacatatttccaggcca
ccgtgcatgcacatgggcctctataaatcgctcatacattggtttggttt
attacaaaggTTACTAAACCGATCTTGATtgacaaaatatcttttttaaa
tataatcctCCTTGAGGACTTCCTCGCACTCTCCATTTGTAATCGCTCTG
CGGCATTGCTCGATTTCTCTCGTTTGCTTTACTTCTCCATTCTTTTACTT
GGTctctttccattatttttaaatcGTCTGTGATGCTCATGTTGGCGTAC
TTGTCGTACTGCTTCAATTCCCTTAAGTTTCtcataaatttgtattttac
atgcccGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019152-exon-sc0000319-1491911889:341256..343366 | TCONS_00019152-exon-sc0000319-1491911889:341256..343366 | Clytia hemisphaerica | exon |
| TCONS_00019152-exon-sc0000319-1510915933:341256..343366 | TCONS_00019152-exon-sc0000319-1510915933:341256..343366 | Clytia hemisphaerica | exon |
| TCONS_00019152-exon-sc0000319-1575043694:341256..343366 | TCONS_00019152-exon-sc0000319-1575043694:341256..343366 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000319 | supercontig | sc0000319:341256..343366 . |
Blast
The following BLAST results are available for this feature:
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