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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019229 ID=TCONS_00019229|Name=TCONS_00019229|organism=Clytia hemisphaerica|type=transcript|length=1528bp
GCCTTTTTCGCGCACCATTCATAAATTTATTTATAGCGCTACTATGACGA
CATGAATAGTCATTCATGGCAACAGCGTAAACGatattgaaatcaaattt
tcaagatggcggactcGTAAACATGTATTTGCCATTTTCTTCAACCCTTT
CTCGACTGGTTTAATTCTCCTTACACTTCAACATCAATAAAATGGGGACT
GGAAAGAACAAGAAACTGTTATGTGTTTGTGAAATTTGTACTTGTGGtCG
CCATCACTGTGTCCACCGTCCGAAAACAAACAAACCAAGCGGCCCATGTG
CTTTATCCGAATACAAAGAAACATATCGCAAATTTGACAACTATGCACCA
CAAAAACCCATCAAACCAGATTCTGCTACCAAAAGGAGTGATGTCCCACT
CGATGCTAGAACATTATACGAATTAGAGTATACAAAACATCCATTAGAAG
CACGTAAGAAACGAGAACAGGCTAAATATGTCAAGCCTGGAGGAAATTTT
GATGGCACCTCAAGCTACCAACATGATTATACTGAGAAATCtgctgaaaa
aatgaaatcagctCGACCACCTTACCAACCAGCTACATCAGACCGTCCTT
TCAGTGGAACGACCGTTCATCAAGAAACATACAAACCGTGGGAAGTTCCA
TTTACCCAGGGTATTCGTCATCAATCAGCTATCAAATTACCATCAGGAAA
ATTTGACCATAAAACCACTTTCCAAAAAGATTTTACTGGATATCCAGGAC
ACGCTGGTCGACAACCCATCATACCAAAAGGCCCAACTCTTTCGATGGGT
GCTGGTAAATTCTCAGATGAAACCACCACCCGTCGTGATTACACACCCAA
GGATGCCCGCCCTGAGAAATCAGCCAGACCACCCCAATATGTGCTTCACA
ATACAGACCCATTTGATCATAAAACCACATTCCAACATAACTTTCCATGG
CCTAAGGGACATCCAGCTGAAAGTTGTAAACCACAACAGATGGTAAGACG
CTCCAGTATGCCATTAGATGGGCTAACAACTCATAACATGACCTATAAGC
CTTGGGAAGTTGCTAAGACAAAAGGCTGGAAACCTAAATCTGGTTGGGTA
CCACCCCAAGATCCATTCGATGCTAAGACCACCTTCCAACATGATTATGA
TGGCAAATCGTCATCACCAGCTCGAAGCATGCGTCCTTACTATAACCGAA
TGGAGCCAGGAGAATTTGCAGATCGAACAACGCATAAAGATGCGTTTAAA
CCATGGGAAGTGAATGCACGTCAAAGCTGCAAACCAAAGGAAGCATACAG
CCCGCATGggAGAACCATCATACAACACCACCACGACTaaaatagaaatt
atatttttctaagaaaaaaaattgtgcaCACACTATCAACACCACTACTT
TGTAAAAAGATATGCTTCAATCTATGAAAATACACAATAATGAATACGAA
AATTGATTTGTACTCTCTTTCTGTACTTTTATACCTCTCCCTACTATTTA
TGTAATAGTTAttggacagttgcgagta Run BLAST on NCBI protein sequence of TCONS_00019229-protein >TCONS_00019229-protein ID=TCONS_00019229-protein|Name=TCONS_00019229-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
MGTGKNKKLLCVCEICTCGRHHCVHRPKTNKPSGPCALSEYKETYRKFDN
YAPQKPIKPDSATKRSDVPLDARTLYELEYTKHPLEARKKREQAKYVKPG
GNFDGTSSYQHDYTEKSAEKMKSARPPYQPATSDRPFSGTTVHQETYKPW
EVPFTQGIRHQSAIKLPSGKFDHKTTFQKDFTGYPGHAGRQPIIPKGPTL
SMGAGKFSDETTTRRDYTPKDARPEKSARPPQYVLHNTDPFDHKTTFQHN
FPWPKGHPAESCKPQQMVRRSSMPLDGLTTHNMTYKPWEVAKTKGWKPKS
GWVPPQDPFDAKTTFQHDYDGKSSSPARSMRPYYNRMEPGEFADRTTHKD
AFKPWEVNARQSCKPKEAYSPHGRTIIQHHHD Run BLAST on NCBI transcript from alignment at sc0000321:334410..341389+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019229 ID=TCONS_00019229|Name=TCONS_00019229|organism=Clytia hemisphaerica|type=transcript|length=6980bp|location=Sequence derived from alignment at sc0000321:334410..341389+ (Clytia hemisphaerica)
GCCTTTTTCGCGCACCATTCATAAATTTATTTATAGCGCTACTATGACGA
CATGAATAGTCATTCATGGCAACAGCGTAAACGatattgaaatcaaattt
tcaagatggcggactcGTAAACATGTATTTGCCATTTTCTTCAACCCTTT
CTCGACTGGTTTAATTCTCCTTACACTTCAACATCAATAAAATGGGGACT
GGAAAGAACAAGAAACTGTTATGTGTTTGTGAAATTTGTACTTGTGGGTA
AGTTACTTAATTTTGAAGAGATGAATACAATAAATTTCATAGCTGTGCTG
GATAAAAGCCAAAGTAGATTTTCAAATCTCAATcttgtcagttacatcaa
tatgccttcttacctgtctttaaaaatataaataaaagtaatcacggaaa
aggacgcgaaaaaaaaagacataagtgtgagaNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgaaagtt
tgtctcggcctttttataatgagcgagacatacgttctctgattacgcaa
ttttcatattgacattttcgaggcattttgatgtaactgcttgTAGTGTA
TTCAATCATCAACTGCTCATTTGAATTTCcattcttttatttcaaaatga
caCTTCTAAATTAAGATTAAGAGCAGGAGAATTGTACACTTTAAAAAAGA
CATGCAATTTGTGGACATTCCCGGCCCGTACCGTGGTGAGATTGGTTAAA
CTTGCATCAGTAATGGTAGAGTAGAACTGCGAGGGGAGCTGCgtagttct
tttgttttgaaattttgctgctttgatttgGTGTCAGTCATTTGGTGgct
aggcggtcatcgaaaaattgttctgttcgcgttgcaacaggtgttaaaaa
tgcatgcgggcggacgggtGGTTGGAAAAATTCCCGGGTTTTTGAAAATC
GCTTCTGTAAGTCAAGGGCAGTTGGTGACACAAACAGAACAATTTTCTGA
TGGCCGCCAGAGCGTTCCAAAAAAAAGCTATACGCATAAAGAACAATTTG
CTTTTTCCGGAATTTTTCCTGCATCTCCACACCAGAAAATCAGGGGGAAA
TATGATGCCGGCGAGTGAcccgaatagaacaattttatgatGGCCGCCCT
ATGCGAGTTTCTCTCCACTGATGCTActgtagcctgggaatccaagcgtt
aaacttttttcacagtctagtttatgatatttttgctgctggtttaacgc
ttggtgcaggtaactcgcctgcagggaNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNctaatctacctgcaccaagctctataattttag
aactttgtgaggtgaggtattttttgttttttctaagattatgagcttgg
attcccaggctacactgatgcaagttacccaacttcgcGGTACTTGGGAA
AAATAAAAAGGGGTATACGGGGATTTGCAGCTGGTCAGGGTACTTTTTTC
ACCTTTATGAATCCCAGGATAGGTggcaaaaacacaaaattttagtccca
ttcaagggtcactttaaaaaaaaaaggagtCCCACAAACTGACGAAGGGT
CTATTTTTTTGAAAGGTGTTgaaattagaccaacttattTATACTGCCTG
TCGtgaaaaacaaagagaaatcaATTAGATGATGTTagatcattttattt
taaaaaggtttatgcTGAAGTAATTGTTATTCAATAGATCATCGCATTCT
CATAAACAAACTATAGTCTGATTCTGTAACGTCAATTTCACACACAATCA
GCCATTTACCTACGAAATGGTGGAAAGAATATGGAAACAGGATGATTTAG
TAACACCTTGATAGCTCAAAGTCTCTAAGtatttatctatctatctatat
atttaagtaacATTAGGCCCGAAGTCCCATTTTCGCTATATACATAAAAT
ACGAGATtgtttaataaaataattttattcataAATATCAATAAGTATTA
AAATcaataataataacatataTGTATAAACTGAATTGGTTTATACATTC
TAATGAATTTCCCGAGAAAACGTGTCAAACATATACATATACATATTTCC
TTGTAAAATcggaaaattgaattaaaagttttaaCCTTTTTTGTCGTGAC
CTTGACAGGATACTGTAAAGAGAAAAGAAGTTTTTCAATGGAAAGGCCAG
AAGAGTGACTGGGGAATGAATCTTGACTTTTGTTGTATGATTGATTTGTA
AAAGTTCATTTAGATTCATTTTAGATAATTTTAAGTCAAATCACGAGGCT
GACTTCCATTTATGTAGTTCTTATTAAAAACTCTGTACCATTACTCCCTG
CACTAGCTAGTTAAAGTAAGAAAGGTCCTTTATGTTAACTTATCTACCTA
CAAAAGGTAAAAGCTCCTATACCACAACCCCTTGTAGCTATCACTAttag
tcaaaatattttaaaagtaaaaagtttGTGATAATCTGTACAGTGAGTAT
GAACATGATTCAAATTATATCAATGACCCATGAAGTCTATAGCTGTAAAC
AACTACTCAAttatttatcattcaaaaaataagtttatCAAATATTCCAA
AACAATTTATAAATAATTTAGATTTCTATTCACAgttcatttttatgatt
ttaccTCCTTCAATTTCCATGTAGATTTTAAGTAGTCATGGTGGTTCCAT
AGTTTCATAGTGATTTACTTTCTTCTTctaatttcaataatttcaaaaag
tttatttaGAATGATGTGTTCTTAAAAAGCTTTTGgtgaattttgattgt
ttttttaatgGCTCCTTTTGTAAATCAGCATTACGGACGAGAATATAATA
TTTTGAATTGGAGGTATTTAATTTCAATAAGTTTGTACATTCAAAGTGAT
GAAGTGTTCTCTTAAGACTGACAACAATGTGTCCGAAAATAAGTGGACAA
ATGTTTatgtaaagtaaaatcctcataatCACTAGCGATAGTCATGAGTT
AAAAATCTACCAGTTGACACACAAGTGATTCACACTTTTGTAAATCAAGT
CGAAATTCACTTTTTGCTTTATGTAAAAttccgagaaaaaaaatcaaaag
cttGTTACCTATGAAgcaagttgaaaaatattacaaaccaaatttaattt
tacctTTCTTGTTTCCATTTAATTAAGCGCTGAACCTTAAAGCAGAGTTA
TGTGAAGTACAAAGTTTTTTACAAGACCTAGCCAGAGATTGAAAATACCA
CCTGAGTACCCTAGTACTATTTACTCACCagttagaaatttaaaatttaa
tttgatttctttttagtCGCCATCACTGTGTCCACCGTCCGAAAACAAAC
AAACCAAGCGGCCCATGTGCTTTATCCGAATACAAAGAAACATATCGCAA
ATTTGACAACTATGCACCACAAAAACCCATCAAACCAGATTCTGCTACCA
AAAGGAGTGATGTCCCACTCGATGCTAGAACATTATACGAATTAGAGTAT
ACAAAACATCCATTAGAAGCACGTAAGAAACGAGAACAGGCTAAATATGT
CAAGCCTGGAGGAAATTTTGATGGCACCTCAAGCTACCAACATGATTATA
CTGAGAAATCtgctgaaaaaatgaaatcagctCGACCACCTTACCAACCA
GCTACATCAGACCGTCCTTTCAGTGGAACGACCGTTCATCAAGAAACATA
CAAACCGTGGGAAGTTCCATTTACCCAGGGTATTCGTCATCAATCAGCTA
TCAAATTACCATCAGGAAAATTTGACCATAAAACCACTTTCCAAAAAGAT
TTTACTGGATATCCAGGACACGCTGGTCGACAACCCATCATACCAAAAGG
CCCAACTCTTTCGATGGGTGCTGGTAAATTCTCAGATGAAACCACCACCC
GTCGTGATTACACACCCAAGGATGCCCGCCCTGAGAAATCAGCCAGACCA
CCCCAATATGTGCTTCACAATACAGACCCATTTGATCATAAAACCACATT
CCAACATAACTTTCCATGGCCTAAGGGACATCCAGCTGAAAGTTGTAAAC
CACAACAGATGGTAAGACGCTCCAGTATGCCATTAGATGGGCTAACAACT
CATAACATGACCTATAAGCCTTGGGAAGTTGCTAAGACAAAAGGCTGGAA
ACCTAAATCTGGTTGGGTACCACCCCAAGATCCATTCGATGCTAAGACCA
CCTTCCAACATGATTATGATGGCAAATCGTCATCACCAGCTCGAAGCATG
CGTCCTTACTATAACCGAATGGAGCCAGGAGAATTTGCAGATCGAACAAC
GCATAAAGATGCGTTTAAACCATGGGAAGTGAATGCACGTCAAAGCTGCA
AACCAAAGGAAGCATACAGCCCGCATGGTAAGTTTGATGGGTCTACCACT
TTCCAAACCGATTTCAAAGGACGACAAGGTGATCGTCGCGATCTATGTAT
CCCTAAAGGTAGTGGATTGGCTTTCCAAGGTCCCCAAGATTTCTCTACCA
TGTATGGTAATACCTTCTTGGGTGAGAGACCGCCTTCATGCCCAGCCAAA
TATTTGGAGACGCGTAGAAATACGGCTTCACGTAATGGTTATGTTTTCAA
ACAGGATAATAATGGACATCAGTTCTTTAAGCCTCCATACGTTCGTGAAT
CGGTGGAACATATACCAACCTCACCTTCACAAGATCTAAGGCTTACTAAG
TCCTTAGAGGTTTTATCAATGTGAGAAAGGTGTTATTGTTTGGGAGATGT
GGACTGTTAAATTGGTAGGGACAAGATCCCTTGTGGAACTCCCTTTAATG
GAGATTCTAAAACTCAGATGCCAGCATTTGGATTACCATAATAAAAAGGA
TATTGATTTTAATGATACTGATATAATGGAGAACTTTTGGGAGCTAATTA
TGAATGGACAGTCTTGTTTGACTGGCGAAagcaaattttttaatttgaca
aaatttttcatttagaattttttatgaCAATTGATTATGATTAATCTCta
gtcattttttattttattgaattttttttgtcaacacTGTACATAAAGAA
TTTTTAAtccattttatcaaaataagaatcttttcaaactttaaaagggT
GTTGAGTATTTTTAAGGAGAGATTGATTGTATCGGTGGTTGTACAGGGTG
TTCTTAAATTTGATCGATTTTCGGAATAAATGTTTTCAACTNTGTACAGG
GTGTTCTTAAATTTGATCGATTTTCGGAATAAATGTTTTCAACTACGACA
GTAGCTTATTGATTAATCCCGAATAAGAAGTGTCTGTTGATTGTTATTGG
AGTATGAGTCAATTCATAATTTCAATACAAACTTTTTTAACAGTATCCTT
GGAAGCACTTTTAAGACAATATACGGAAATTtagataatattttttaata
ttttgacacAAATTATATATCCTATATTTTAGTTTTGTCCACTTTAATTT
GACTCGTGCTTTCCTATAATTTTAGAGATGTTTAATTACTCTGAAAATTA
TATTataatgaattttttaaataggAAATTTTAGCACACGGTACTTGATA
CATCATTGTGCATTTTGCCAACAAACGTACGAactattttgaatttcaaa
ttatGTTTTTACCGTATATGATATGCACTTTTGCAAGATAATTTCTATAC
ATGTTTCACTTTTAAATGCACCGTTTATAATTCTTTTGTGTGTCCAATCA
TAAAAAATACCTCTttgaattgagatttttttgtaaaattcaatTTATTC
TAATTAATCTTACAATTTTTCTGGAAAGGACTTCTGTAGTCCCCAAAAAT
TGTCGGTAAAATATGAAACATTTGCTGTGTAAATTCCATTTTCCGAGTTC
tgtatttaaaattttaattcagAGAGTTCAACTTTACATCTAGGGACACA
AGAATTAAAATTGTATATTATATTTGACACATAATTTAtcgtaatatttt
attttcttagggAGAACCATCATACAACACCACCACGACTaaaatagaaa
ttatatttttctaagaaaaaaaattgtgcaCACACTATCAACACCACTAC
TTTGTAAAAAGATATGCTTCAATCTATGAAAATACACAATAATGAATACG
AAAATTGATTTGTACTCTCTTTCTGTACTTTTATACCTCTCCCTACTATT
TATGTAATAGTTAttggacagttgcgagta Coding sequence (CDS) from alignment at sc0000321:334410..341389+ >TCONS_00019229 ID=TCONS_00019229|Name=TCONS_00019229|organism=Clytia hemisphaerica|type=CDS|length=3447bp|location=Sequence derived from alignment at sc0000321:334410..341389+ (Clytia hemisphaerica)
ATGGGGACTGGAAAGAACAAGAAACTGTTATGTGTTTGTGAAATTTGTAC
TTGTGGtCGCCATCACTGTGTCCACCGTCCGAAAACAAACAAACCAAGCG
GCCCATGTGCTTTATCCGAATACAAAGAAACATATCGCAAATTTGACAAC
TATGCACCACAAAAACCCATCAAACCAGATTCTGCTACCAAAAGGAGTGA
TGTCCCACTCGATGCTAGAACATTATACGAATTAGAGTATACAAAACATC
CATTAGAAGCACGTAAGAAACGAGAACAGGCTAAATATGTCAAGCCTGGA
GGAAATTTTGATGGCACCTCAAGCTACCAACATGATTATACTGAGAAATC
tgctgaaaaaatgaaatcagctCGACCACCTTACCAACCAGCTACATCAG
ACCGTCCTTTCAGTGGAACGACCGTTCATCAAGAAACATACAAACCGTGG
GAAGTTCCATTTACCCAGGGTATTCGTCATCAATCAGCTATCAAATTACC
ATCAGGAAAATTTGACCATAAAACCACTTTCCAAAAAGATTTTACTGGAT
ATCCAGGACACGCTGGTCGACAACCCATCATACCAAAAGGCCCAACTCTT
TCGATGGGTGCTGGTAAATTCTCAGATGAAACCACCACCCGTCGTGATTA
CACACCCAAGGATGCCCGCCCTGAGAAATCAGCCAGACCACCCCAATATG
TGCTTCACAATACAGACCCATTTGATCATAAAACCACATTCCAACATAAC
TTTCCATGGCCTAAGGGACATCCAGCTGAAAGTTGTAAACCACAACAGAT
GGTAAGACGCTCCAGTATGCCATTAGATGGGCTAACAACTCATAACATGA
CCTATAAGCCTTGGGAAGTTGCTAAGACAAAAGGCTGGAAACCTAAATCT
GGTTGGGTACCACCCCAAGATCCATTCGATGCTAAGACCACCTTCCAACA
TGATTATGATGGCAAATCGTCATCACCAGCTCGAAGCATGCGTCCTTACT
ATAACCGAATGGAGCCAGGAGAATTTGCAGATCGAACAACGCATAAAGAT
GCGTTTAAACCATGGGAAGTGAATGCACGTCAAAGCTGCAAACCAAAGGA
AGCATACAGCCCGCATGggAGAACCATCATACAACACCACCACGACTaaA
TGGGGACTGGAAAGAACAAGAAACTGTTATGTGTTTGTGAAATTTGTACT
TGTGGtCGCCATCACTGTGTCCACCGTCCGAAAACAAACAAACCAAGCGG
CCCATGTGCTTTATCCGAATACAAAGAAACATATCGCAAATTTGACAACT
ATGCACCACAAAAACCCATCAAACCAGATTCTGCTACCAAAAGGAGTGAT
GTCCCACTCGATGCTAGAACATTATACGAATTAGAGTATACAAAACATCC
ATTAGAAGCACGTAAGAAACGAGAACAGGCTAAATATGTCAAGCCTGGAG
GAAATTTTGATGGCACCTCAAGCTACCAACATGATTATACTGAGAAATCt
gctgaaaaaatgaaatcagctCGACCACCTTACCAACCAGCTACATCAGA
CCGTCCTTTCAGTGGAACGACCGTTCATCAAGAAACATACAAACCGTGGG
AAGTTCCATTTACCCAGGGTATTCGTCATCAATCAGCTATCAAATTACCA
TCAGGAAAATTTGACCATAAAACCACTTTCCAAAAAGATTTTACTGGATA
TCCAGGACACGCTGGTCGACAACCCATCATACCAAAAGGCCCAACTCTTT
CGATGGGTGCTGGTAAATTCTCAGATGAAACCACCACCCGTCGTGATTAC
ACACCCAAGGATGCCCGCCCTGAGAAATCAGCCAGACCACCCCAATATGT
GCTTCACAATACAGACCCATTTGATCATAAAACCACATTCCAACATAACT
TTCCATGGCCTAAGGGACATCCAGCTGAAAGTTGTAAACCACAACAGATG
GTAAGACGCTCCAGTATGCCATTAGATGGGCTAACAACTCATAACATGAC
CTATAAGCCTTGGGAAGTTGCTAAGACAAAAGGCTGGAAACCTAAATCTG
GTTGGGTACCACCCCAAGATCCATTCGATGCTAAGACCACCTTCCAACAT
GATTATGATGGCAAATCGTCATCACCAGCTCGAAGCATGCGTCCTTACTA
TAACCGAATGGAGCCAGGAGAATTTGCAGATCGAACAACGCATAAAGATG
CGTTTAAACCATGGGAAGTGAATGCACGTCAAAGCTGCAAACCAAAGGAA
GCATACAGCCCGCATGggAGAACCATCATACAACACCACCACGACTaaAT
GGGGACTGGAAAGAACAAGAAACTGTTATGTGTTTGTGAAATTTGTACTT
GTGGtCGCCATCACTGTGTCCACCGTCCGAAAACAAACAAACCAAGCGGC
CCATGTGCTTTATCCGAATACAAAGAAACATATCGCAAATTTGACAACTA
TGCACCACAAAAACCCATCAAACCAGATTCTGCTACCAAAAGGAGTGATG
TCCCACTCGATGCTAGAACATTATACGAATTAGAGTATACAAAACATCCA
TTAGAAGCACGTAAGAAACGAGAACAGGCTAAATATGTCAAGCCTGGAGG
AAATTTTGATGGCACCTCAAGCTACCAACATGATTATACTGAGAAATCtg
ctgaaaaaatgaaatcagctCGACCACCTTACCAACCAGCTACATCAGAC
CGTCCTTTCAGTGGAACGACCGTTCATCAAGAAACATACAAACCGTGGGA
AGTTCCATTTACCCAGGGTATTCGTCATCAATCAGCTATCAAATTACCAT
CAGGAAAATTTGACCATAAAACCACTTTCCAAAAAGATTTTACTGGATAT
CCAGGACACGCTGGTCGACAACCCATCATACCAAAAGGCCCAACTCTTTC
GATGGGTGCTGGTAAATTCTCAGATGAAACCACCACCCGTCGTGATTACA
CACCCAAGGATGCCCGCCCTGAGAAATCAGCCAGACCACCCCAATATGTG
CTTCACAATACAGACCCATTTGATCATAAAACCACATTCCAACATAACTT
TCCATGGCCTAAGGGACATCCAGCTGAAAGTTGTAAACCACAACAGATGG
TAAGACGCTCCAGTATGCCATTAGATGGGCTAACAACTCATAACATGACC
TATAAGCCTTGGGAAGTTGCTAAGACAAAAGGCTGGAAACCTAAATCTGG
TTGGGTACCACCCCAAGATCCATTCGATGCTAAGACCACCTTCCAACATG
ATTATGATGGCAAATCGTCATCACCAGCTCGAAGCATGCGTCCTTACTAT
AACCGAATGGAGCCAGGAGAATTTGCAGATCGAACAACGCATAAAGATGC
GTTTAAACCATGGGAAGTGAATGCACGTCAAAGCTGCAAACCAAAGGAAG
CATACAGCCCGCATGggAGAACCATCATACAACACCACCACGACTaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019229-exon-sc0000321-1491911889:334410..334656 | TCONS_00019229-exon-sc0000321-1491911889:334410..334656 | Clytia hemisphaerica | exon |
| TCONS_00019229-exon-sc0000321-1510915933:334410..334656 | TCONS_00019229-exon-sc0000321-1510915933:334410..334656 | Clytia hemisphaerica | exon |
| TCONS_00019229-exon-sc0000321-1575043694:334410..334656 | TCONS_00019229-exon-sc0000321-1575043694:334410..334656 | Clytia hemisphaerica | exon |
| TCONS_00019229-exon-sc0000321-1491911889:338526..339586 | TCONS_00019229-exon-sc0000321-1491911889:338526..339586 | Clytia hemisphaerica | exon |
| TCONS_00019229-exon-sc0000321-1510915933:338526..339586 | TCONS_00019229-exon-sc0000321-1510915933:338526..339586 | Clytia hemisphaerica | exon |
| TCONS_00019229-exon-sc0000321-1575043694:338526..339586 | TCONS_00019229-exon-sc0000321-1575043694:338526..339586 | Clytia hemisphaerica | exon |
| TCONS_00019229-exon-sc0000321-1491911889:341170..341389 | TCONS_00019229-exon-sc0000321-1491911889:341170..341389 | Clytia hemisphaerica | exon |
| TCONS_00019229-exon-sc0000321-1510915933:341170..341389 | TCONS_00019229-exon-sc0000321-1510915933:341170..341389 | Clytia hemisphaerica | exon |
| TCONS_00019229-exon-sc0000321-1575043694:341170..341389 | TCONS_00019229-exon-sc0000321-1575043694:341170..341389 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000321 | supercontig | sc0000321:334410..341389 + |
Blast
BLAST of TCONS_00019229 vs. Swiss-Prot (Human)
Match: SAXO1 (Stabilizer of axonemal microtubules 1 OS=Homo sapiens GN=SAXO1 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 5.492e-31 Identity = 105/369 (28.46%), Postives = 162/369 (43.90%), Query Frame = 3
Query: 222 CVCEICTCGRHHCVHRPKT--NKPSGPCALSEYKETYRKFDNYAPQKPIKPDSATKRSDVPLDARTLYELEYTKHPLEARKKREQAKYVKPGGNFDGTSSYQHDYTEKSAEKMKSARPPYQPATSDRPFSGTTVHQETYK----PWEVPFTQGIRHQSAIKLPSGKFDHKTTFQKDF--TGYPGHAGRQPI-IPKGPTLSMGAGKFSDETTTRRDYT--PKDARPEKSA---RPPQYVLHNTDPFDHKTTFQHNFPWPKGHPAESCKPQQMVRRSSMPLDGLTTHNMTYKPWEVAKTKGWKPKSGWVPPQDPFDAKTTFQHDYDGKSSSPARSMRPYYNRMEPGEFADRTTHKDAFKPWEVNARQSCKP 1286
C+CE+C+CGRHHC H P +K PC LSEY E Y + +Y P++ KP ++ +P++ T ++ H + K + ++V N D ++Y+ DY ++ P +P S P S TYK PW P + +R + + S +FD++TT Q D+ G +P+ +PK + D T + Y P + R A RP + PF+ TT + ++ G PA+S KP MP T Y+ W + + P + +VPP+D D TT Q Y +PA+S RP + G F +T KD +K W + KP
Sbjct: 5 CICELCSCGRHHCPHLPTKIYDKTEKPCLLSEYTENYPFYHSYLPRESFKPRREYQKGPIPMEGLTTSRRDFGPHKVAPVKVHQYDQFVPSEENMDLLTTYKKDYNPYPVCRVD----PIKPRDSKYPCSDKMECLPTYKADYLPWNQPRREPLRLEHKYQPASVRFDNRTTHQDDYPIKGLVKTISCKPLAMPK-----LCNIPLEDVTNYKMSYVAHPVEKRFVHEAEKFRPCEI------PFESLTTQKQSYRGLMGEPAKSLKPLARPPGLDMPFCNTTEFRDKYQAWPMPRMFSKAPIT-YVPPEDRMDLLTTVQAHYTCPKGAPAQSCRPALQIKKCGRFEGSSTTKDDYKQWSSMRTEPVKP 357
The following BLAST results are available for this feature:
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