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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019258 ID=TCONS_00019258|Name=TCONS_00019258|organism=Clytia hemisphaerica|type=transcript|length=2144bp
GGAACTTCAGGTTCGGAGCCAAATTAaggtttcttatagaaaaaacgtgt
attttattttctagatttttaaattttgatatttagaaaacTGATACGAG
AAACAAAATGGCAAATTCAAGGACAGTTAGATGTGTCAAATGGCTTGTCT
TTGTATTTAATCTTCTTTTCTTTCTTTCTGGTTGTTGTTTGATTGGATTT
GGAGTTTGGTTGAACGTTGCTAGAGATGATTGGCAAGGTATTTCAGAGTA
TGCTTACATGTCCATCGCTAATATCTGCTTGGCCACTGGAATCATTATTG
TACTTGTTGCTTTTGTGGGATGCTGTGGAGCCATAACCGAAAATAAAATC
ATGCTTCTCCTGttctttattttcctGTTGGTCATATTTTTGATGGAAAT
CGGATCTGCAATTTCTGCCTACATATGGCGTGAGAAGATCAACGAGGAAC
TGAAAGATCAACTTGAGCAACGAATTCCTGAGCGTTATTATACTGAAACC
GCTGTTGAACTTGCTGTCAACAAAATCCAATCCCATTTCAAATGTTGCGG
CTTGTATAACAGCTCTGATTGGGGAAAAACTACTGCGAGTACGAacGAGC
CAATGATTGACCAGAGTTGTTGTATTCAAGACAGCGCCCATTCCAATTAC
AATTCCAACTGCGTTTCAAGACCCTGGGGAAGCATTCAAGCCGATGATGA
AAAGTTGCTGAAAGAATATTACGAGGATGGTTGTTATGACAAGATCAAGG
ActtcatcaaagaaaacatgTGGTTGTCTGTGCTCTTTGGATTTATCTTT
GCTTTCATACAGATCATTGGTATGGTATTGTCAATGTTTTTGTATTGCGT
GTTAAGAAGAAACGAAATGGTTTATTGATGATTTTGAATCACTACAATTT
TAATGTAACGTAAACAAGCTTGAGATCTGGACCTTGCCCACTTGAGAGCT
GATATGAAGGGCCATAACTTGGGAAAAATATGGTAGCtgcaaaaatgatc
agtcaAAATGTTTGATTCTTGGGGTGGTCTTGGTTAAAATTTCATCgttt
attacacgttttttacaagaacatccaaattttttgaagtcttatgcttt
ttgtttttatataaaaaaacgtgtacaaaaaACATGTCACATTGATTTTG
GACATTGAACTGATGTGACAGTATTTATCGCCGAATGTGACAAAAATGAA
CATTTTATGATTATGATACATTTTATTTAATTAAAAGTaagtttaagttt
tttttctttgtttctgtAATTAGTGATTGCGtatttaacatattttatga
ttttataagATTTTATATTAAATTTACCTTTGGAAAGGCGATTTGATCAG
GTTTTGGATTTAGTTCCACAATTGTCCTTTACGAGTTAGAAAATACTACC
GTGAGTATCAGAGCGTATATAGTAAATTTAGATTCTATTCAGTGCGCGTT
CAGTGACAACAAaaaaacgccaaaatttgttagaatggctatttatgctt
caatttacattaaaatatcatttttcagtagtaaactgtaaatgaatgat
aaaaaattaacgccaCTTTCAAGTAAAATTTGCTAAGTTTTGGCCCTTTT
AACATCGGCCCTTTTAACAttggcccttattacgccaagagCCTAAGAGC
TaagagcctaaaaataacgccaataagggccggtgtaaaaagggcctaTA
AGGTAATTGTAATGTGAACAAAACATGTGCGATAAAATCCTTATAGTTTG
TCTTTGCATGCTAAATTTCAGTGAAAGTTAAAATGTGGTGAGCGCTCACA
GTAAAAAATTGCCAGATTCATTttagaatatatttttattGGATATACTT
GAATTTGTTGGATATCAAAATTTCTCTGAAAGAGAATAAGACACGCTGCA
TGTCCTCATAATTTATCAACAACAAGGTGTTTTTGCTGACctaagatttt
gcttggctggaaTATTAAGATATATTTAGGTCATGGTTGTTTTCATTAAT
CATCTCGTGAAAATTTGAGCATTTTAACGTCACATTTGAACTATTTTTAG
TTTGTAATTAACTCCTGgtacaataaaaaagaaaaaagaaaatattgctA
GAGTAtgaaatcaatttttcattcgcaaataaaccaatcctcac Run BLAST on NCBI protein sequence of TCONS_00019258-protein >TCONS_00019258-protein ID=TCONS_00019258-protein|Name=TCONS_00019258-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
MANSRTVRCVKWLVFVFNLLFFLSGCCLIGFGVWLNVARDDWQGISEYAY
MSIANICLATGIIIVLVAFVGCCGAITENKIMLLLFFIFLLVIFLMEIGS
AISAYIWREKINEELKDQLEQRIPERYYTETAVELAVNKIQSHFKCCGLY
NSSDWGKTTASTNEPMIDQSCCIQDSAHSNYNSNCVSRPWGSIQADDEKL
LKEYYEDGCYDKIKDFIKENMWLSVLFGFIFAFIQIIGMVLSMFLYCVLR
RNEMVY Run BLAST on NCBI transcript from alignment at sc0000323:17836..25518+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019258 ID=TCONS_00019258|Name=TCONS_00019258|organism=Clytia hemisphaerica|type=transcript|length=7683bp|location=Sequence derived from alignment at sc0000323:17836..25518+ (Clytia hemisphaerica)
GGAACTTCAGGTTCGGAGCCAAATTAaggtttcttatagaaaaaacgtgt
attttattttctagatttttaaattttgatatttagaaaacTGATACGAG
AAACAAAATGGCAAATTCAAGGACAGTTAGATGTGTCAAATGGCTTGTCT
TTGTATTTAATCTTCTTTTCTTTGTAAgtatacactttttttctttatga
GACTCAATATTCACTCAAtattgctaaaaaattaagaatatgctaagaat
caTGGAATTGGAAACTGAACCTAAAGAACGCCATTTTCAGGGCAATATCC
CCGTAAATCATCCCCTAGCAATgctaaaatctttcaaaaaattcatgTTA
CATTTAGCCTCAGTTTAGTTCCTAACTAACGGTATGACCTCGTAAGAATA
CTTTAGAATTTTCCCCTAAAAGGTTAAAGATATCGGAAAAAACAacatct
tattaaaaaaaacgtgtaaaaaagCATTCATCAAGGTTCGCTAACAGGTC
AACACCTTTCTCCCCCTATTTTCTGAATAAAAACTTATTAATTGCGTTAA
AATGTTAAATAGCATAACGGAAAAAGATCTTGGTGAAAACGTGGGCAACG
TCTAATGGGTctttaaagtttgaagtttGACATATAGTATCACCCTCATT
CATTTCGACAggctgaaattatttttttccttctttccgCTTTTAGGAGT
TTCGGATAACACCCATAATTTACAGATATGtgttttttgtaagattttaa
aTCAATTAGAACAGCCAGTGGGATAGCGGACTGAAACACGATAGGGATTG
Atattacaatatttttttcatgactggggatttcaattcttttgttttca
aggtaaaaaattcagtggggatgggaaaaatagtaaatattttacagtga
ggaatttttttatttgattattttcagtggggacaaaaacagaacaataa
ttttccactgtggacgatattttagccaattttttcagtgagaaggggtc
ccagtgggtctgtgagaaggggtgtattaGATGTTTTTTATCTGTAGGAG
TATCAAAACTATAGCTTACGCTTACGTTTACTGAGCTTGTCGGGAAGAAT
GTTGATatacgtgttttttataagaacaaactatataagaacatagactt
cgatggccaaaattttaaaagcaagttaagaacatttttaggcttagaac
tcaaaaagttaagaacactaaaaagcttcaaaaaatttggatgttctcat
aaaaaaaactgtAAATTGTTTATTGAGCTTGTCCGGAAGAAATTCATTAT
CGTTTCGTCAATCGTCCCTCTTCAATCGAAACCAAAACTGTTTCATCAAT
ATATATTATTTTCCACCTTAAaattcttacgcgcacggtaaacctctgag
gGCGAGATGAAAATAGGAAGAAGAGGAAAATAGTCAATCTATAATAAGAA
CTTTTTGTCGAAAATTGAACACGCCCTACTTTTAAACACAATCacaaaaa
cacccccttctcacagacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaacttagtcggcc
ttaattattagtcggccctaattttagtcacctcgtcaaaatttagtcac
taagggccgactaataactaagttttggccatttctaaattgttagtcgg
cccaaattttagtcggccctaattttagtcaccaagccaaaatttagtca
cttagggcacTTTCAGAGTTGTGgatttagggggggggttcaaAAGTTGC
GATATTCACAGTATGTTTCTCAAAATTGGAAAAGTACATCGACATATGGA
TTTAAAACTCCCGTTATTCAGGTCGCAACTTTCCCATAACTCTCAAATGT
TATTTTACTTTCATACCAGCTTTCTGGTTGTTGTTTGATTGGATTTGGAG
TTTGGTTGAACGTTGCTAGAGATGATTGGCAAGGTATTTCAGAGTATGCT
TACATGTCCATCGCTAATATCTGCTTGGCCACTGGAATCATTATTGTACT
TGTTGCTTTTGTGGGATGCTGTGGAGCCATAACCGAAAATAAAATCATGC
TTCTCCTGGTACGTGTCGACCTCATTTCCATGCCTACTCTCTTATCTTTC
TTTGCGAGTGTTTAATAAAGATTACCGCCGGAGgagggcactcgattcaa
aaacgaccgtgAGAACAGCCCAGAATTAGGCCTTTAAAATCAGACCCTTA
cggtgcagagaaaattttgagcGAATTTTACACCTTTAGAGagcattttt
ctcatttttgccGATTTCAACCCTTACATTGCAcggaaaatataccctta
agggccgcacgtatgataggtcatttaccttgagtgccccctgGTATTCa
caaaatattttgtaataAACGATCTCGTATTATCggttttttatgcttac
tgatagcacaAAATAGTGCCCTGTGAGAATGGGAACTCGCCTACAGCAGA
GGATATTTTCTCGCATCAATTAATATCATCAGTATCCTTATCTTCTTCTT
TTGTTCTAAAGAGAAGGGTTCGAAATTTATtgtacttgaagaaaaattta
tttgggagagatttttttaatgttgaaaattcTCTTCAttttagttcttt
attttcctGTTGGTCATATTTTTGATGGAAATCGGATCTGCAATTTCTGC
CTACATATGGCGTGAGAAGGTAATATATTTATAAGtcttttgacatattt
tttctAGAAGAGGAGCATTCGAAATCATTATTCTCTATGATGGAATCATA
TGGGCCTTATGGATGTTTCATGGACGTTATTTTGACTTTctttgtaaaat
gtttttttgttgaaGTTTTGCAACAtgtgtaaaaatgtaaaaacgagtat
ttaaaaacaaattaagagTGGTCAGAAAAGGGTCGACTTAAGGCTCTaac
ataggcggttttagaccgcacatcgaacttatcagaggaagagatttgta
attgtaattttattgtcttttaacgagcgttacACTCTTTctcatgtttc
cgacgtacttgctctgtTCTTTTAAATCCGCCATTGCATAATTATAAGCC
ATAATTAAAAGCGCGTATAGTTGTTTTCCTGTGAAATTTCCCCTTcaatg
taaaatcaaaaatttaaagcATGAGTAGTGAGACCTCTGTCTGGCTTTAT
CCTACCAACTTCTTCATCTTGACTCTCGAATAGATTGGGGTCAGTGATAA
AATGTGGAAAAGTTTACAAATTAAATTACTGTAACCCATTAAGTGCTTCT
GGCATCATAcggacacccctgtctcacagctccgttggaactttttccca
cggTGGAGATGAAAATCTCCATCGAagttttttccattgaattttaaatg
tGGATGAAAAAAGCCTACTTCCCAGTGGTGCTGGAATTGTAAGGTATTTT
TCACGCCGGGACGGGATTTAGGTCAAATTTTACATTAGGATTAGGGGCCC
ACCGGACACATGGGTGTTTTTAAAAACTCTTTTCTTTCATAGATCAACGA
GGAACTGAAAGATCAACTTGAGCAACGAATTCCTGAGCGTTATTATACTG
AAACCGCTGTTGAACTTGCTGTCAACAAAATCCAATCCCATTTCAAATGT
TGCGGCTTGTATAACAGCTCTGATTGGGGAAAAACTACTGCGAGTACGAG
TAAGTGACTTAGTAAAAGTGTCCGGGGCACTTAGCTTAATGGTCTGACAG
AGAACCGTACTGCTAGAGTTGGCTCCGTCAGAAACAAAtatttgatagaa
tttgaaccCTGACAGAGGAAATTATGAACCTATcaaacaccaaattttga
acTTGATGGACGAATTTAGACCAGAGATTACGTTTTTGAAATTTACAAGA
GTTGCCAAATATTTAACTTGAAAGCCCCTCCTCCCCATCATTCTAAGACA
TTCTAAAATACAAACAACAGAAAGATATAAGGTATCATCTAATTTTAAAT
GAATGGTATTCATTCGATTGACCAaatcaaattttgacttttaaatggAA
AGGAATAATCTAATACCATCACATCATCAAACACTCCCAAAAAGATTAAG
ACGACACCACCGAAAAAGCTCATTATAAAacgtcttcttcattttcagac
GAGCCAATGATTGACCAGAGTTGTTGTATTCAAGACAGCGCCCATTCCAA
TTACAATTCCAACTGCGTTTCAAGACCCTGGGGAAGCATTCAAGCCGATG
ATGAAAAGTTGCTGAAAGAATATTACGAGGATGTAAGTTAAAAGTCATGA
TAAAGTACGACCTGTGCCTGGGTAAATGTAAAGAAAACTAAATCCTCATG
ATTTATtgtatatttcaaattttataaccTAAGAGcttgatttcttattt
ttttaattttattgccTCAGGGATTGATAGCCCATTGATTGAACGAATAA
TTCCCACAGCCGCTCCAAACTTACTTAGAAAGAcgattttatttgatttt
tacttacatgaaatattttcattttctttcgaTCACATCCTAATTTGGGA
CCAATCGATTACTTTTTGAGACAGtcaaatgaaatattttaaactatTAG
CCTTTTAGTCTATTAAGTCTTTTGAGATAATCTCCCAATGCCAGGTGCCA
ATTGACAAAAAACAGTAATGAGGAGGTTGCATAAATGGCAGTTTATATGA
GCCAAGGACCACTTTTCTGGACCAATTTATCCAGAAATTTCGGGAACCTC
CATCTTATCTCATTATATATATTTCGGCATTCAATTTTAGGGTTGTTATG
ACAAGATCAAGGActtcatcaaagaaaacatgTGGTTGTCTGTGCTCTTT
GGATTTATCTTTGCTTTCATACAGGTAAAGAAATTAAAGTATtattaaat
tttataaaaattcttaGGTCTGTTCAAAACTCTGGTTTGCATGATTTGGT
TCTTTTGGTCAAACTTTACTTTGACCAGATTGTAGTCGACATCTTACAAA
ATATTAGATATATTCGAGATGCAGAAGTGCTTACATGATAACTCCTCAGA
GCCTCCCTTACCCAAAGGGGAGATACGATACTGGTACTATATCTCGTCAA
AATAACCACAGTCCGTAACTCCGTATAGAAACctgctgggaccccagccc
cactggaaaatttggctaaaaactTGTCCCCGATGGAATTTCAGCCTTAC
Tgggaattgactttgatttcatcttcatatgaaattcaatgtttaaaaat
tgcactccccGATGGACTTTTTAACAttggagcaatagaatttctatccc
cactgaggaaaaaagtttcaccggtgTGTATAGAAACCCCGGTCTTGAAG
CGTTTGATTTCCTTCTATTGTTTATGACTTGAATAACTTTTGCTGctaaa
ttagtttgttttgcttactttttgatcatgtgatcaaGTTCTGAACCAAT
CCCAGGAGGAGGATTTGGAAAACATAGTCAAAAACTGTTCAATGCTANCA
AGTTCTGAACCAATCCCAGGAGGAGAATTTGGAAAACGTAGTCAAAAACT
GTTCAATGCTGTTGTTATCTTTTGTCATTAACAACTTACTATATTTTTTA
GATCATTGGTATGGTATTGTCAATGTTTTTGTATTGCGTGTTAAGAAGAA
ACGAAATGGTTTATTGATGATTTTGAATCACTACAATTTTAATGTAACGT
AAACAAGCTTGAGATCTGGACCTTGCCCACTTGAGAGCTGATATGAAGGG
CCATAACTTGGGAAAAATATGGTAGCtgcaaaaatgatcagtcaAAATGT
TTGATTCTTGGGGTGGTCTTGGTTAAAATTTCATCgtttattacacgttt
tttacaagaacatccaaattttttgaagtcttatgctttttgtttttata
taaaaaaacgtgtacaaaaaACATGTCACATTGATTTTGGACATTGAACT
GATGTGACAGTATTTATCGCCGAATGTGACAAAAATGAACATTTTATGAT
TATGATACATTTTATTTAATTAAAAGTaagtttaagttttttttctttgt
ttctgtAATTAGTGATTGCGtatttaacatattttatgattttataagAT
TTTATATTAAATTTACCTTTGGAAAGGCGATTTGATCAGGTTTTGGATTT
AGTTCCACAATTGTCCTTTACGAGTTAGAAAATACTACCGTGAGTATCAG
AGCGTATATAGTAAATTTAGATTCTATTCAGTGCGCGTTCAGTGACAACA
Aaaaaacgccaaaatttgttagaatggctatttatgcttcaatttacatt
aaaatatcatttttcagtagtaaactgtaaatgaatgataaaaaattaac
gccaCTTTCAAGTAAAATTTGCTAAGTTTTGGCCCTTTTAACATCGGCCC
TTTTAACAttggcccttattacgccaagagCCTAAGAGCTaagagcctaa
aaataacgccaataagggccggtgtaaaaagggcctaTAAGGTAATTGTA
ATGTGAACAAAACATGTGCGATAAAATCCTTATAGTTTGTCTTTGCATGC
TAAATTTCAGTGAAAGTTAAAATGTGGTGAGCGCTCACAGTAAAAAATTG
CCAGATTCATTttagaatatatttttattGGATATACTTGAATTTGTTGG
ATATCAAAATTTCTCTGAAAGAGAATAAGACACGCTGCATGTCCTCATAA
TTTATCAACAACAAGGTGTTTTTGCTGACctaagattttgcttggctgga
aTATTAAGATATATTTAGGTCATGGTTGTTTTCATTAATCATCTCGTGAA
AATTTGAGCATTTTAACGTCACATTTGAACTATTTTTAGTTTGTAATTAA
CTCCTGgtacaataaaaaagaaaaaagaaaatattgctAGAGTAtgaaat
caatttttcattcgcaaataaaccaatcctcac Coding sequence (CDS) from alignment at sc0000323:17836..25518+ >TCONS_00019258 ID=TCONS_00019258|Name=TCONS_00019258|organism=Clytia hemisphaerica|type=CDS|length=5397bp|location=Sequence derived from alignment at sc0000323:17836..25518+ (Clytia hemisphaerica)
ATGGCAAATTCAAGGACAGTTAGATGTGTCAAATGGCTTGTCTTTGTATT
TAATCTTCTTTTCTTTCTTTCTGGTTGTTGTTTGATTGGATTTGGAGTTT
GGTTGAACGTTGCTAGAGATGATTGGCAAGGTATTTCAGAGTATGCTTAC
ATGTCCATCGCTAATATCTGCTTGGCCACTGGAATCATTATTGTACTTGT
TGCTTTTGTGGGATGCTGTGGAGCCATAACCGAAAATAAAATCATGCTTC
TCCTGttctttattttcctGTTGGTCATATTTTTGATGGAAATCGGATCT
GCAATTTCTGCCTACATATGGCGTGAGAAGATCAACGAGGAACTGAAAGA
TCAACTTGAGCAACGAATTCCTGAGCGTTATTATACTGAAACCGCTGTTG
AACTTGCTGTCAACAAAATCCAATCCCATTTCAAATGTTGCGGCTTGTAT
AACAGCTCTGATTGGGGAAAAACTACTGCGAGTACGAacGAGCCAATGAT
TGACCAGAGTTGTTGTATTCAAGACAGCGCCCATTCCAATTACAATTCCA
ACTGCGTTTCAAGACCCTGGGGAAGCATTCAAGCCGATGATGAAAAGTTG
CTGAAAGAATATTACGAGGATGGTTGTTATGACAAGATCAAGGActtcat
caaagaaaacatgTGGTTGTCTGTGCTCTTTGGATTTATCTTTGCTTTCA
TACAGATCATTGGTATGGTATTGTCAATGTTTTTGTATTGCGTGTTAAGA
AGAAACGAAATGGTTTATTGAATGGCAAATTCAAGGACAGTTAGATGTGT
CAAATGGCTTGTCTTTGTATTTAATCTTCTTTTCTTTCTTTCTGGTTGTT
GTTTGATTGGATTTGGAGTTTGGTTGAACGTTGCTAGAGATGATTGGCAA
GGTATTTCAGAGTATGCTTACATGTCCATCGCTAATATCTGCTTGGCCAC
TGGAATCATTATTGTACTTGTTGCTTTTGTGGGATGCTGTGGAGCCATAA
CCGAAAATAAAATCATGCTTCTCCTGttctttattttcctGTTGGTCATA
TTTTTGATGGAAATCGGATCTGCAATTTCTGCCTACATATGGCGTGAGAA
GATCAACGAGGAACTGAAAGATCAACTTGAGCAACGAATTCCTGAGCGTT
ATTATACTGAAACCGCTGTTGAACTTGCTGTCAACAAAATCCAATCCCAT
TTCAAATGTTGCGGCTTGTATAACAGCTCTGATTGGGGAAAAACTACTGC
GAGTACGAacGAGCCAATGATTGACCAGAGTTGTTGTATTCAAGACAGCG
CCCATTCCAATTACAATTCCAACTGCGTTTCAAGACCCTGGGGAAGCATT
CAAGCCGATGATGAAAAGTTGCTGAAAGAATATTACGAGGATGGTTGTTA
TGACAAGATCAAGGActtcatcaaagaaaacatgTGGTTGTCTGTGCTCT
TTGGATTTATCTTTGCTTTCATACAGATCATTGGTATGGTATTGTCAATG
TTTTTGTATTGCGTGTTAAGAAGAAACGAAATGGTTTATTGAATGGCAAA
TTCAAGGACAGTTAGATGTGTCAAATGGCTTGTCTTTGTATTTAATCTTC
TTTTCTTTCTTTCTGGTTGTTGTTTGATTGGATTTGGAGTTTGGTTGAAC
GTTGCTAGAGATGATTGGCAAGGTATTTCAGAGTATGCTTACATGTCCAT
CGCTAATATCTGCTTGGCCACTGGAATCATTATTGTACTTGTTGCTTTTG
TGGGATGCTGTGGAGCCATAACCGAAAATAAAATCATGCTTCTCCTGttc
tttattttcctGTTGGTCATATTTTTGATGGAAATCGGATCTGCAATTTC
TGCCTACATATGGCGTGAGAAGATCAACGAGGAACTGAAAGATCAACTTG
AGCAACGAATTCCTGAGCGTTATTATACTGAAACCGCTGTTGAACTTGCT
GTCAACAAAATCCAATCCCATTTCAAATGTTGCGGCTTGTATAACAGCTC
TGATTGGGGAAAAACTACTGCGAGTACGAacGAGCCAATGATTGACCAGA
GTTGTTGTATTCAAGACAGCGCCCATTCCAATTACAATTCCAACTGCGTT
TCAAGACCCTGGGGAAGCATTCAAGCCGATGATGAAAAGTTGCTGAAAGA
ATATTACGAGGATGGTTGTTATGACAAGATCAAGGActtcatcaaagaaa
acatgTGGTTGTCTGTGCTCTTTGGATTTATCTTTGCTTTCATACAGATC
ATTGGTATGGTATTGTCAATGTTTTTGTATTGCGTGTTAAGAAGAAACGA
AATGGTTTATTGAATGGCAAATTCAAGGACAGTTAGATGTGTCAAATGGC
TTGTCTTTGTATTTAATCTTCTTTTCTTTCTTTCTGGTTGTTGTTTGATT
GGATTTGGAGTTTGGTTGAACGTTGCTAGAGATGATTGGCAAGGTATTTC
AGAGTATGCTTACATGTCCATCGCTAATATCTGCTTGGCCACTGGAATCA
TTATTGTACTTGTTGCTTTTGTGGGATGCTGTGGAGCCATAACCGAAAAT
AAAATCATGCTTCTCCTGttctttattttcctGTTGGTCATATTTTTGAT
GGAAATCGGATCTGCAATTTCTGCCTACATATGGCGTGAGAAGATCAACG
AGGAACTGAAAGATCAACTTGAGCAACGAATTCCTGAGCGTTATTATACT
GAAACCGCTGTTGAACTTGCTGTCAACAAAATCCAATCCCATTTCAAATG
TTGCGGCTTGTATAACAGCTCTGATTGGGGAAAAACTACTGCGAGTACGA
acGAGCCAATGATTGACCAGAGTTGTTGTATTCAAGACAGCGCCCATTCC
AATTACAATTCCAACTGCGTTTCAAGACCCTGGGGAAGCATTCAAGCCGA
TGATGAAAAGTTGCTGAAAGAATATTACGAGGATGGTTGTTATGACAAGA
TCAAGGActtcatcaaagaaaacatgTGGTTGTCTGTGCTCTTTGGATTT
ATCTTTGCTTTCATACAGATCATTGGTATGGTATTGTCAATGTTTTTGTA
TTGCGTGTTAAGAAGAAACGAAATGGTTTATTGAATGGCAAATTCAAGGA
CAGTTAGATGTGTCAAATGGCTTGTCTTTGTATTTAATCTTCTTTTCTTT
CTTTCTGGTTGTTGTTTGATTGGATTTGGAGTTTGGTTGAACGTTGCTAG
AGATGATTGGCAAGGTATTTCAGAGTATGCTTACATGTCCATCGCTAATA
TCTGCTTGGCCACTGGAATCATTATTGTACTTGTTGCTTTTGTGGGATGC
TGTGGAGCCATAACCGAAAATAAAATCATGCTTCTCCTGttctttatttt
cctGTTGGTCATATTTTTGATGGAAATCGGATCTGCAATTTCTGCCTACA
TATGGCGTGAGAAGATCAACGAGGAACTGAAAGATCAACTTGAGCAACGA
ATTCCTGAGCGTTATTATACTGAAACCGCTGTTGAACTTGCTGTCAACAA
AATCCAATCCCATTTCAAATGTTGCGGCTTGTATAACAGCTCTGATTGGG
GAAAAACTACTGCGAGTACGAacGAGCCAATGATTGACCAGAGTTGTTGT
ATTCAAGACAGCGCCCATTCCAATTACAATTCCAACTGCGTTTCAAGACC
CTGGGGAAGCATTCAAGCCGATGATGAAAAGTTGCTGAAAGAATATTACG
AGGATGGTTGTTATGACAAGATCAAGGActtcatcaaagaaaacatgTGG
TTGTCTGTGCTCTTTGGATTTATCTTTGCTTTCATACAGATCATTGGTAT
GGTATTGTCAATGTTTTTGTATTGCGTGTTAAGAAGAAACGAAATGGTTT
ATTGAATGGCAAATTCAAGGACAGTTAGATGTGTCAAATGGCTTGTCTTT
GTATTTAATCTTCTTTTCTTTCTTTCTGGTTGTTGTTTGATTGGATTTGG
AGTTTGGTTGAACGTTGCTAGAGATGATTGGCAAGGTATTTCAGAGTATG
CTTACATGTCCATCGCTAATATCTGCTTGGCCACTGGAATCATTATTGTA
CTTGTTGCTTTTGTGGGATGCTGTGGAGCCATAACCGAAAATAAAATCAT
GCTTCTCCTGttctttattttcctGTTGGTCATATTTTTGATGGAAATCG
GATCTGCAATTTCTGCCTACATATGGCGTGAGAAGATCAACGAGGAACTG
AAAGATCAACTTGAGCAACGAATTCCTGAGCGTTATTATACTGAAACCGC
TGTTGAACTTGCTGTCAACAAAATCCAATCCCATTTCAAATGTTGCGGCT
TGTATAACAGCTCTGATTGGGGAAAAACTACTGCGAGTACGAacGAGCCA
ATGATTGACCAGAGTTGTTGTATTCAAGACAGCGCCCATTCCAATTACAA
TTCCAACTGCGTTTCAAGACCCTGGGGAAGCATTCAAGCCGATGATGAAA
AGTTGCTGAAAGAATATTACGAGGATGGTTGTTATGACAAGATCAAGGAc
ttcatcaaagaaaacatgTGGTTGTCTGTGCTCTTTGGATTTATCTTTGC
TTTCATACAGATCATTGGTATGGTATTGTCAATGTTTTTGTATTGCGTGT
TAAGAAGAAACGAAATGGTTTATTGAATGGCAAATTCAAGGACAGTTAGA
TGTGTCAAATGGCTTGTCTTTGTATTTAATCTTCTTTTCTTTCTTTCTGG
TTGTTGTTTGATTGGATTTGGAGTTTGGTTGAACGTTGCTAGAGATGATT
GGCAAGGTATTTCAGAGTATGCTTACATGTCCATCGCTAATATCTGCTTG
GCCACTGGAATCATTATTGTACTTGTTGCTTTTGTGGGATGCTGTGGAGC
CATAACCGAAAATAAAATCATGCTTCTCCTGttctttattttcctGTTGG
TCATATTTTTGATGGAAATCGGATCTGCAATTTCTGCCTACATATGGCGT
GAGAAGATCAACGAGGAACTGAAAGATCAACTTGAGCAACGAATTCCTGA
GCGTTATTATACTGAAACCGCTGTTGAACTTGCTGTCAACAAAATCCAAT
CCCATTTCAAATGTTGCGGCTTGTATAACAGCTCTGATTGGGGAAAAACT
ACTGCGAGTACGAacGAGCCAATGATTGACCAGAGTTGTTGTATTCAAGA
CAGCGCCCATTCCAATTACAATTCCAACTGCGTTTCAAGACCCTGGGGAA
GCATTCAAGCCGATGATGAAAAGTTGCTGAAAGAATATTACGAGGATGGT
TGTTATGACAAGATCAAGGActtcatcaaagaaaacatgTGGTTGTCTGT
GCTCTTTGGATTTATCTTTGCTTTCATACAGATCATTGGTATGGTATTGT
CAATGTTTTTGTATTGCGTGTTAAGAAGAAACGAAATGGTTTATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019258-exon-sc0000323-1491911889:17836..18008 | TCONS_00019258-exon-sc0000323-1491911889:17836..18008 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1510915933:17836..18008 | TCONS_00019258-exon-sc0000323-1510915933:17836..18008 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1575043694:17836..18008 | TCONS_00019258-exon-sc0000323-1575043694:17836..18008 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1491911889:20505..20693 | TCONS_00019258-exon-sc0000323-1491911889:20505..20693 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1510915933:20505..20693 | TCONS_00019258-exon-sc0000323-1510915933:20505..20693 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1575043694:20505..20693 | TCONS_00019258-exon-sc0000323-1575043694:20505..20693 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1491911889:21230..21304 | TCONS_00019258-exon-sc0000323-1491911889:21230..21304 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1510915933:21230..21304 | TCONS_00019258-exon-sc0000323-1510915933:21230..21304 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1575043694:21230..21304 | TCONS_00019258-exon-sc0000323-1575043694:21230..21304 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1491911889:22128..22284 | TCONS_00019258-exon-sc0000323-1491911889:22128..22284 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1510915933:22128..22284 | TCONS_00019258-exon-sc0000323-1510915933:22128..22284 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1575043694:22128..22284 | TCONS_00019258-exon-sc0000323-1575043694:22128..22284 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1491911889:22734..22867 | TCONS_00019258-exon-sc0000323-1491911889:22734..22867 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1510915933:22734..22867 | TCONS_00019258-exon-sc0000323-1510915933:22734..22867 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1575043694:22734..22867 | TCONS_00019258-exon-sc0000323-1575043694:22734..22867 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1491911889:23376..23459 | TCONS_00019258-exon-sc0000323-1491911889:23376..23459 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1510915933:23376..23459 | TCONS_00019258-exon-sc0000323-1510915933:23376..23459 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1575043694:23376..23459 | TCONS_00019258-exon-sc0000323-1575043694:23376..23459 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1491911889:24187..25518 | TCONS_00019258-exon-sc0000323-1491911889:24187..25518 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1510915933:24187..25518 | TCONS_00019258-exon-sc0000323-1510915933:24187..25518 | Clytia hemisphaerica | exon |
| TCONS_00019258-exon-sc0000323-1575043694:24187..25518 | TCONS_00019258-exon-sc0000323-1575043694:24187..25518 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000323 | supercontig | sc0000323:17836..25518 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
Blast
BLAST of TCONS_00019258 vs. Swiss-Prot (Human)
Match: TSN9 (Tetraspanin-9 OS=Homo sapiens GN=TSPAN9 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.586e-18 Identity = 84/251 (33.47%), Postives = 136/251 (54.18%), Query Frame = 3
Query: 132 CVKWXXXXXXXXXXXSGCCLIGFGVWLNVARDDWQGISE-YAYMSIANICLATGIIIVLVAFVGCCGAITENKXXXXXXXXXXXXXXXXXXGSAISAYIWREKINEELKDQLEQRIPERYYTETAVEL--AVNKIQSHFKCCGLYNSSDWGKTTASTNEPMIDQSCCIQDSAHSNYNSNCVSRPWGSIQADDEKLLKEYYEDGCYDKIKDFIKENMWLSVLXXXXXXXXXXXXMVLSMFLYCVLRRNEMVY 875
C+K+++F+FNL+F+L GC L+G G+WL+V++ ++ S + +S AN+ +A G I+++ F+GC GAI ENK +LL FFI LLVI L E+ I +++ +K+NE K L++ + Y+TE V L A N IQ+ +CCG+ + +DW P CC+++S N+ + GCY+K+K + +N + G +QI+GM SM L+ + R Y
Sbjct: 8 CLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILLILFFVYMDKVNENAKKDLKEGL-LLYHTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVP---DRCCMENSQGCGRNAT-----------------TPLWRTGCYEKVKMWFDDNKHVLGTVGMCILIMQILGMAFSMTLFQHIHRTGKKY 237
The following BLAST results are available for this feature:
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