TCONS_00019260 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019260
Unique NameTCONS_00019260
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1970

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019260 ID=TCONS_00019260|Name=TCONS_00019260|organism=Clytia hemisphaerica|type=transcript|length=1970bp
ACAAAATGGCGGCAGAAAATGTTCCAGACAGTCGACGTGGAAAGGCTGAT
CTAATCTGCTCGTATCTCATTCAATCAGTTTTGCTAGTATTGTTTTTCAG
TTGTGAACCCTTCATGCATCAGTTTTGAAAATACTATTACtggtattttt
ttatatttctacAGTGATACTAAACAAAAAAGCTAAATCAACATGGCCGA
TGCTACCTTGGAAGAAGATTTCATTCCAGATTACGAAGAAACCAGTGACA
ATGAAGCAGCTGCAGAAGAAGCTGCTCAAAGTACTGAGCCAGCCAAAAAA
GATGTCAAAGGAACCTATGTCAGTATCCATAGCTCCGGCTTTCGCGATTT
CCTTTTGAAACCAGAGTTGTTGCGCGCAATTGTTGATTGTGGTTTTGAAC
ATCCATCTGAAGTCCAACATGAATGTATCCCTCAAGCAATCCTTGGAATG
GATATTGTCTGTCAAGCCAAAAGTGGTATGGGAAAAACAGCTGTGTTTGT
TTTGGCTACATTGCAACAATTGGAACCTGTTGATGGTCAAGTCAGTGTTC
TTGTCATGTCACATACTCGTGAATTGGCTTTTCAAGTTAGCAAAGAATAT
GAAAGATTCTCCAAGTATTTGAACAACATCAAGGTTGCTGTCTTCTTTGG
TGGATTGAGTGTCAAAAAAGATGAACAAGTCTTGAAAACAAATTGTCCAA
ATATTGTTGTTGGAACACCAGGTCGTATCTTAGCATTGGCTCGTGATAAA
GTCCTCAATTTGAAGCacatcaaacatttcattttgGATGAATGTGACAA
GATGTTGGAGCAACTTGATATGAGAAGAGATGTCCAAGAAATTTTCAGGA
TGACACCACATGAAAAACAAGTCATGATGTTCAGTGCCACCCTCAGTAAA
GAAATGAGAACCGTCTGCAAGAAGTTTATGCAAGATCCAATGGAAGTTTA
CGTTGATGATGAAACAAAATTGACCCTCCATGGTTTGACACAGCATTACT
GCAAACTGAAAGATAGCGAGAAGAACAGAAAATTATTCGATCTTCTTGAT
GCACTTGAATTTAACCAGgTCATCATCTTTGTTAAGTCAGTTCAAAGATG
CAGTGCCTTATCTGGATTGTTAGTCGAACAGAATTTCCCAGCCATCGCCA
TTCATCGATCTATGCCTCAAGAAGAAAGAATCTCGAGATACAGACAATTC
AAAGATTTCCAGAAGAGAATTCTGGTTGCCACCAATTTATTTGGTCGTGG
TATGGATATCGAAAGGGTCAACATCGTCGTCAATTATGACATGCCCGAAG
ATTCAGACACGTATTTGCACAGGGTTGCACGTGCTGGTCGTTTCGGTACT
AAAGGTCTTGCCATTTCCTTCGTCGCTGATGAAGAGGACGCAAAAACTTT
GAACGACGTTCAAGATCGATTTGAAGTGAATGTCAGTGAGCTGCCAGTCG
AAATTGATGTTTCCACGTACATTGAAGGTTATGAAGCACAACGATAACTA
TTCACCATCTGGTGTTCCAAAACGATTAATTTATTAAGATCATAAAATAT
GCGAACACTTGCAGACTTGCATCGGTGAAATCTATCTGAAATTCTATCAT
CGGATGTAAGAACCAGTAGAATGACACGTTAATTTAGGCATATGAATTGT
CGCATTCATGCAATTTATGCATCGGTCAGCAAAATGAGCTGGACAAGAAA
GGCTGTCGACgttgatttattttattttgtaaatatagtaacacatacga
aattttttttcacgaagATTAACTTGGCTCAACTTTTTTAAATCAcaaga
aatgaaagaaatgcgctttgtctttttttccttcctttttaCTGAAAGAA
ATGTTAAGTTCGTGCGTACTCtcaggttccaaataaacggacgttaattt
ttcgaaaattttccaacccctcgGAGCTTATTAGGACCCCTCTTCCCATT
TATTAAGGTATGTgtaaaag
Run BLAST on NCBI

protein sequence of TCONS_00019260-protein

>TCONS_00019260-protein ID=TCONS_00019260-protein|Name=TCONS_00019260-protein|organism=Clytia hemisphaerica|type=polypeptide|length=434bp
MADATLEEDFIPDYEETSDNEAAAEEAAQSTEPAKKDVKGTYVSIHSSGF
RDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIVCQAKSGMGKTA
VFVLATLQQLEPVDGQVSVLVMSHTRELAFQVSKEYERFSKYLNNIKVAV
FFGGLSVKKDEQVLKTNCPNIVVGTPGRILALARDKVLNLKHIKHFILDE
CDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEMRTVCKKFMQDPM
EVYVDDETKLTLHGLTQHYCKLKDSEKNRKLFDLLDALEFNQVIIFVKSV
QRCSALSGLLVEQNFPAIAIHRSMPQEERISRYRQFKDFQKRILVATNLF
GRGMDIERVNIVVNYDMPEDSDTYLHRVARAGRFGTKGLAISFVADEEDA
KTLNDVQDRFEVNVSELPVEIDVSTYIEGYEAQR
Run BLAST on NCBI

transcript from alignment at sc0000323:122977..135215+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019260 ID=TCONS_00019260|Name=TCONS_00019260|organism=Clytia hemisphaerica|type=transcript|length=12239bp|location=Sequence derived from alignment at sc0000323:122977..135215+ (Clytia hemisphaerica)
ACAAAATGGCGGCAGAAAATGTTCCAGACAGTCGACGTGGAAAGGCTGAT
CTAATCTGCTCGTATCTCATTCAATCAGTTTTGCTAGTATTGTTTTTCAG
TTGTGAACCCTTCATGCATCAGTTTTGAAAATACTATTACtggtattttt
ttatatttctacAGTGATACTAAACAAAAAAGCTAAATCAACATGGCCGA
TGCTACCTTGGAAGAAGATTTCATTCCAGATTACGAAGAAACCAGTGACA
ATGAAGCAGCTGCAGAAGAAGCTGCTCAAAGTACTGAGCCAGCCAAAAAA
GATGTCAAAGGAACCTATGTCAGTATCCATAGCTCCGGCTTTCGCGATTT
CCTTTTGAAACCAGAGTTGTTGCGCGCAATTGTTGATTGTGGTTTTGAAC
ATCCATCTGAAGGTATATGTCTttttgaataaacaaaaaatgttctaGTA
TCTGCTAGTATGGccctttaaaacaatactataaGCAGCTATACCGGAGG
Gggagtactagggttggcgaatgaggggtatgtgcggatgggacctccga
aaaccaaccctcagagagactgatttttgctgaaaaggtgacccttagag
agacttttgaatatttttttttcgatttttgaaaaaagttaaaccCTTGG
AGAGACTTTGTTAcaaatttttctctggaaatcagaaattttcctaaaaa
tcctgaattttccgacccttagagagactaatttaaaaatttctgatttt
tccgacccttagggGTCACTCaaatatcgattcttcccacgactaacatC
AAATTGACGTgaaggggtgggtgggttagagtctttgacgctaagaaatt
tcaccagaaatatcgatttttaataCGTTTATTCCGTGActatgttactt
tccatatttcttttcctcctttcaCATACCTAAATATTCGATCGCTTCGC
TATTTTACAGAAactttaaccaaaacaaacggccaGATATTTACGTCTCG
AGTTCCTTTTGTTCAGACTGTCCGCACGACCCTTGAATTTTGCCGATGgt
cagtcttttttttttgtgaaatgcagcttttctgttgattatgattgtgg
agataattaattccagaaactttctgaaaaaagtttagaaattatctcca
ttattttttaaatgtaaactgcctgagcaagccgtagcgaaattaaagat
ggctgacgaaacaacaatgaaagtgaaggagaaaattttcatcgattttt
gataatttttgaactttgacgTTAAGAGGTGTGGGTGGGGGGGTTTCAAa
ttagcgtcaatttgacgttagtcgtgggaagaatcgatatgtgagtgacc
ccttagagaaactttgaaaggtgaaaaaccgacATTTCGCTAAATGCTCA
GAGCGCGACGGcccattttccctttcctatctttcaccttacctgtttat
tctactttctgagacttagtctctcatttctgactgagttttcatacctg
tcaatcattattccatcaatttcgaccaatctaattttcgcaccgagtgg
gattcgaaccaccaccaaagaaagaccatCAGATTCGGAAaccagcgctc
tatccgttgagccatcgccgcacagcaaaatcacgaaattcataacacat
tataccgaactggcaaaatacgggggtaatgttattataatatgggtaaa
agtaccccttttttaaacctgactggaattcgagccgttactagcaaccc
tgcgggacccaaggcgccgagtatgcacccggcacagtgacaagccgttg
ctagcaaccctgaccctgacccaataccccctgaatcacggaatgatgga
taggaaaaattatcggggaaaaaattgcTCTGCGCGGTCTGTGCATATAG
CGAAATctaaaaaccgacccttaccgtccgcacacacctatcatccattt
ttgcttaagtttttctatttctatttggttgagttgtaggaggctttgag
gcctattttcgcaactatagacgctttcaatgagcgcctcatcagcacct
tggactgactacccaattcccctcatatggcatgggttgacccgggcgaa
ggttcattcacttgccaagtgaactgctgcgagtgggaatcgaacctcag
tcgcttgtgcagcaaccaaggttaatgaccactataccCCACTGACCCAT
ACCTCccattgtttgggaggtaaatgAACGCGGTTTCGCCTGCGTGGGGT
TGGGGAAAGTGGGTTTTAAGCTGTTAACTTTTGATAGGGATCTTTTTTTG
GCAAAAGaatttcagggtggtataatatcatgaatagaaagaacatatta
aaatttgaggcaattttgattgataaaactttaagaaaagctgaaaaacc
aactttccccaGCTTTCCCTAGggaaacgcaggcaaaaacggggtTTGTT
tatacctccagagaccaaacgtgGAGAGCATCAATAATAAATAATGCGTA
CGCATCTTGTTTTGGGAATTATGGGAAAGTGTATTGAATTAAAAACGgca
aaaagagtggaatttccaaaGCATTTTGCTATAAGTTCATGGAAGGTGAG
AAACccttttttcctgtttttccttGGGAAAGTTAGTTTTTTAGCTTATT
CATGTTATGTCTatcaaaatcccctcaaattttaataTGTTCTTTCTATT
CATATTACACCACCCTGAAAGTATTTTGCCAATAAAAGATTGCTATCAGA
AGTAAGAAGCTGAAAACCCCTTGAAGGCAAAAACGCTTTCGTTTACCTCC
CAGACAATTTTATACACATTGGTGGAGCACACATTTTCCAAaccatttct
gagaagtttgaataaCAGGAAtggtgttttctttttttatgggaagaaat
taatttcaaaaatttagggtCTGAAGGTCaagattgaaaaatttgtaTCT
CACTCATTTCCAAAAAgtggagataatttctaaactttggCACAAAATTC
TTgcataattttgataatataCCGTAATTTTGTGAAATGCCAACATACCT
TGCAATGctgcaaatagggaaatttcagttggccggtaatttttcgagtg
taaaGAGCAGGGGGTCTGGCGGAAACATCTTTGCAGTTTGATATTACAGA
TTGACTTATTGGATTattagattggctaaacacctattttaatttaaaaa
ctgTTTCTCTTTTAATTTCCAATTTTAGAAGCGCTACTAAGTATTTAACT
AAGCCCTGCTAAGCctctaatcttcaaattttaaccggacaaaatgaaaa
actgtgCTTCATAATGGCTGgtagaaactacaaaatgaccggtaattacc
ggtcaccggctgttatttgcagcactgaagCGACAGATACCTATCAGGTA
GAAATCTGGAGTAATTAGAAAAGTAACTAAATGATATAAATAACAAAATT
AATCTTTGGTTACAGTGATGAAAGAGAATCTAGAACTTGATTTAAGGGGT
ACAATGACCTTTTACAATCTGCTACAAGAATGGGATTCTAGAAAATCATG
CTTACTTGTGATAGTGCTTGTATAACAAAGGGTGCAAGTTTCNtgttatt
tgcagcactgcctTGTTTAATTCCctcatagcaactatctggtcttcTAA
ATGGTTATTACTTCCTGAGCAAGCTGTTTAAAAACAATGGAATAAGACAA
GGTATGTTGGTATTATGCCAGCGGTACttggggttggaataaaaatgtcc
tggtggaatatttttttaaatgaggaTAATATAGCAGAATCAGGGTAAAA
GAggaacttttaaaactttttcccaaaaattaataagcaggggggtatgt
cctgggtggaaaattttataaaagGGACCCTTATTAGGTACCCAACAGTA
GTACATAGTGGCAAAAAACCTGCTGTCTTCAAATATTCAATAGCCATACT
CCATGGTTTCTgccccccttaaaataaggaGGAGTAAAAGAATTGCCTTT
TGAAAAAGGGgggtttttgtaatttttttaaaaataaggggGGGGTTATC
AAGGGCTGCAAGAATctatcaaaacaagaaaaaagggttttattgataat
atttctttatgtAATATCTTCTTTCCCGTTTTCGTGTTCACAACCTGCAT
CCTCTCGTCCCTCTCTCTATTGTAAAAAAGTGTTTGCTGAAGGGGATTAA
AAAATCTAActggtttttttattttaagggggGGCATTCTGTACtggtaa
tttttgtttgatttaggGGGCAGTTTTCTTTAAGggcaaaacactttttt
tttctctgcTGGCGAGAGAGACAGATTACACATACACATCTCTTTGccat
ttgtttttgtttttcaaaaaaacttaagCTAAAAATGTGAAAAGTCAGGA
AAAGTAGCACTTTCTCTGTACTGTATCCCACGataaaaataagtcaaaac
aAATGAGTGGTCCGCAAAATAGTCAGATTTTCAGTTCTTCCAAGTTCCTA
AATTTAAGAAAGGGAGTAGCcatgtttttaagaaaaaatatttacagcTA
TTGTGCCATGCACAGAATGAAtggatgaattttgaaattaaaaaaatcat
ttttcaaaaattttgtaacaATTAATTTCTTCTATTTCCCCTTCTAGTCC
AACATGAATGTATCCCTCAAGCAATCCTTGGAATGGATATTGTCTGTCAA
GCCAAAAGTGGTATGGGAAAAACAGCTGTGTTTGTTTTGGCTACATTGCA
ACAATTGGAACCTGTTGATGGTCAAGTCAGTGTTCTTGTCATGTCACATA
CTCGTGAATTGGCTTTTCAAGTTAGCAAAGAATATGAAAGATTCTCCAAG
TATTTGAACAACATCAAGGTTGCTGTCTTCTTTGGTGGATTGAGTGTCAA
AAAAGATGAACAAGTCTTGAAAACAAATTGTCCAAATATTGTTGTTGGAA
CACCAGGTCGTATCTTAGCATTGGCTCGTGATAAAGTCCTCAATTTGAAG
CacatcaaacatttcattttgGATGAATGTGACAAGATGNCAAAGTCCTC
AATTTGAAGCAtatcaaacatttcattttgGATGAATGTGACAAGATGTT
GGAGCAACTTGGTAAGAATTAAAGCTGCCATTTTATTGTTTAACATAAAT
AGTTCAATTTAACTGTTGAACTAAGACATTGCAATCTGATCGACTAAGag
agaagaaatattttttgaaaaatcaattttcacgtTGCTCAGACTGCTTA
TCGCAGTCGTTTGAAACCATCTTTTTTTATTCAGGGAccaatatttttgc
tttcaatttaaGCTTTGGACATATggattcagaaaaaaacaagacTTGAG
AGATTTTCTTTTATGAACGTCATTTTCTAATTTCAGATATGAGAAGAGAT
GTCCAAGAAATTTTCAGGATGACACCACATGAAAAACAAGTCATGATGTT
CAGTGCCACCCTCAGTAAAGAAATGAGAACCGTCTGCAAGAAGTTTATGC
AAGATGTAATTATTCCTTGTTGTCATTGTGTAGTTCACTCCATGTTGTTC
CATCAAGTCATCACTTCATATTTCATCCCTGTCATTTATTCTATTCTCAT
ATTCATTATTTCATTTTGTTGTTCATGCATTCCTGTGAACAATATTCATC
ACTCCATTTTGCTGTTCATACGTTTTCATGAACAGCCTTCATTGGTATAC
ATTTGATCATCGTCAAAATTCCATACTTTCCATTTTCATACCATAATGCC
ATATCATTAAACCACGCTCATCTATCACATTGTTGCGGTCGATACCATTG
AGAAGACTCCTGGCAGAACAAGATTGAATATTATTCAAAGATGCTCTTct
caagaagttgattttcctGCTATCAGTTGGTGGCAGAAGTATCCTCTTCA
TAGAATCACTCAATGTTCCTTTTGGTAAAACTATGGCCTGGCTTGGAAAA
GTGAAATTAGTCATTCTACAATAccatattttgaccagttaacttaatat
agctttttaaaatTTGCCTATTTTAATCTTCTTGTACCTTTGAACTGAAA
GCACAAAATCCCGAAAGTCACGTATGACAACCCTGACAACCTTATTGTGT
CAGgagcaatttttaattttactttttttgtgtAGCCAATGGAAGTTTAC
GTTGATGATGAAACAAAATTGACCCTCCATGGTTTGACACAGCATTACTG
CAAACTGAAAGATAGCGAGAAGAACAGAAAATTATTCGATCTTCTTGATG
CACTTGAATTTAACCAGGTAAGAAATATAATCATCTAAACAGCTTTTCAG
CTACTATTAAAAGAGAATAACCATTTTTGCAGGCTTGTCAAAGAAGCTCT
TTATTGTGGGAGGAATCGATGATTTTTTTGCTTAGAAGTACTCTAAGATT
TAAACGAAGCAGTGCTTAAATTTATCTCGTTCATGTGGTGTGATGTTTCT
AGTTTAGAGACAGGTAAATCATTTCTGTTTTGCCAGTAGGAGGGGTTTTG
GTTTGAGGCAATCCATATAGCACCTACACAGTGAAGGGAGAGAGAGGGGA
GTTTAGCAAAAGTATATAATCTCCATTGTTTATTGTTCTCTTCGCACAAG
GGCTTAGGGTGgcaaaaatctggaaaatttttgcATAATATGCACTTTGT
GGATAACCCCTTCGACGGGCTGCAACACTGGATATAGCATTAACGATGAA
GTGTCGATTTTTTAAGACcggttttgaatttgttttaggTCATCATCTTT
GTTAAGTCAGTTCAAAGATGCAGTGCCTTATCTGGATTGTTAGTCGAACA
GAATTTCCCAGCCATCGCCATTCATCGATCTATGCCTCAAGAAGAAAGGt
ataaatttttgcttttttcgatGATTTGTAGAGAAGTAATTAACGCTAAA
CATAAAGATCTATCTATATTCTTCGCCACGGCATGACATCANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
tctaactgaaagctgacaggatgaaatattttacctccctccctccctgc
agttatggttgtaggcgatcctcacttatttatactaatattgtaGTTAT
CAGGATAAACTTTCCCCAAAACTTCTTATTCTTATTATAATTtcatgcca
aacttatatctaacgactcacacttacttctaagccgtctgactacttga
ttggtttctacccctaatgtaggtcataggcaaatggaaagttaaacata
tgtaatatattgcatcttcatattaccgtaaagaaattttgttttgttcc
tcgaattagtatattttttttgtttttagctgggatctgggagtctgggc
tgaaggtgggaattttaggataagatgggacctgaattttcaggtgggac
ctggaacccccttgcacactatgacACTGGAGAAAAAGATTGATACTTGA
TtatacttgaaattttgatgttattgttatttttcaagTATATACTGGAA
ATGAAAATCTCTAGTACTGGAATATACTTGATTTTATCATTCATGATGCC
GCGGAGGTCAAATCCTGGATTGATGTCCAGCGCGGGATAACTCGCCACCC
TTTTTCTTTATATTGTTTGTGAATATCCTTTTTCGTCGAGTCAATTTTAG
TCGAGTATGTACTTGAATTAGCAGTGGGCTATagagacttttttttcaaa
attaagtttgcataattttttttggtaggTTGGGACTCAAATAACATAAA
TCTAagatatttttggatatttccaaaAANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAcctaaaatctgtt
ctatttgtgctacaaacctcaaattaggcttaaaatgttccttgggaaaA
AGCAGGAATCGAATATAGCAATTACATACCTCTACAAAATAAACtctata
aaattcaaaaattagctATTTAGGCCAAAATGGACCGTGTCTTCCCGGTT
TCCGTCCATTTTGACCTGGaaacctaatttttttaattttatatacatGG
TTAGAGGTACATAATTGCTACATTCTTATCctgcttttttccaaggaaca
ttttaagcctaNgatccttggaaaaaagtaggattagaatgtaacaatta
tatacctctgccatatatataaacttaaaaagttaggtttttcggccaaa
attgacaaaaattgcgaaaaaacagggttttgtctggaaaaaaatctaaa
atctgttctgtttgtgctacaagcctcaaattagggtcaaaatattcgtt
ggaaaaaagtaggattagaatgtaaNacatattttatgttttatttcCAG
GCAAAAACAAGTGTCTTCCTGGTTTCGGTCCATTTCGGCCTAAATagcta
atttttgaattttatagaGTTTATTTTGTAGAGGTATGTAATTGCTACAT
TTGATTCCTACTTtttcccaaggaacattttaagcctaatttgaggtttg
tagcacaaatagaacagattttaggttttatttccagGCAAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGCctaaatacttaattttttaaatttatatatatggta
gaggtatatatttgttacattctaatcctactttcctCCAAGGAATATAT
TAAGCATAATTTGAGGTTCATAGCAccaacagaacagattttagattttt
tttcctaggcaaacccttttttccccagtttcggtcaattttggcccaat
ttccaaattttttgaagtttacatATATGGTAgaagtatataattgttac
attctaatcctacttttttccaacgaaTATTTTGACCCTAATTTGAGGTT
CATAGCAcaaacagaacagattttagatttttttccaggcaaaaccctgt
ttttcgcaattttggtcaattttggccgaaaaacctaattttttaaattt
atatatatggcagaggtatataattgttacattctaacccttcttttttc
caaggatcattttgagcctaatttgatggttgtagcaccaacacagcagg
ttttagattttttttccaagcaaaatggcCCGAAAATGGCTCATTTTGGG
CGGAGAACcgccattttttggaaatatccaaaaatatcttagatttatgt
tatttgggtcccaaccaaccaaaaaaaattatgcaaacttaattttgaaa
aaaaggtctCTATAGCCCACTGCTACTTGAATATACTCATTTTTCTTAGT
CCAAGatacttgaaaattttgaaaaatggaaaaaatgtgtgaaaatgTAC
TTGATTATACTGGAAATTGGATTCCCGAAATCGCTGGCCACCCTGTGTAG
AGAAGTAATTAACGCCAAACATAAAGATCTATatacagggtgtctacggg
accttgaaaaccttgaaaatgaaccacccaaccttgaaaaccttgaaaac
tatcaattttctgggaaaagccttgaaaaccttgaaaaatcNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgttaa
aaaccttgaaaagcactatccagacattcgaaaagtaagaataagtaaaa
aaccgcctgcggcgctaaacctTTATAACATTTAGAGAACTCCTCCATAT
TCCCCTGTTTCTGTTGCGATTCTGTCGCAACGAATGCAacatattctttt
atcattagctgagtttttgtcactaattttccgtttgcatgagccctaag
aaatcgaaggttccccaattttcaaatcgcttcagggtgtcttggaataa
tggccattcatcaataaaattttgaggattccttaaaacaactcttttgg
caattgatttttgtaaaaaacaaaatcaaaaacaaggcgttttttagcca
tttgaataagtcaaaatcaaaattttctctcgtcggcgcaaaccatggtt
gcgcctcttCGGGCAGTGTAAACAATTGGTTttgcttctaattctttatt
tctacagttgggagactagggagctggagtttttctttttctggtattgt
tctcgagagggagataggaatttaactgtggaagtaattccccgggcacc
aaaagcgagtaaattttatttgctgtcctctatttttctttcacctacca
ctctgaaaaaaaataaaaaattcctgtaaagagccatgtcaaaaaacctt
gaaaagtgccaaagtttttgccaaaaaaccttgaaaaaccactttaaaat
gaccaaaaaaaccttgaaaaccttgaaaatcccgaaaaaaaatccgtaga
caccctgatATAGCAACATGTTACATAGCCCGTATCTCCATCTAACACCT
TGAGTGTTTTAACTCCTGTTAactcttaaatttttttaatgtgtCCAACA
ATTCTTCTCGACAGAATCTCGAGATACAGACAATTCAAAGATTTCCAGAA
GAGAATTCTGGTTGCCACCAATTTATTTGGTCGTGGTATGGATATCGAAA
GGGTCAACATCGTCGTCAATTATGACATGCCCGAAGATTCAGACACGTAT
TTGCACAGGGTAAGTGAACTTAAATTCACCACTGATAGGAGATTGACCTA
TCTTAGCACAACATACTCCATATAGTGATTTTACGCTATATACGTAAGAA
GAAACTacttaaagttgaaaagttggAATTTATGGATTGGGATAACAGAT
TTTGAATCCGTTATTTTCGATTGAAAACTGCTTCATCCTATTTTCAACTT
CCAAAAAAACTAAAAGGCTACGTCTGTCACTATCTCATTCTAGAAGACGG
TTCTACTTTAAAGTTACTCATTactcatttttcatttctcagGTTGCACG
TGCTGGTCGTTTCGGTACTAAAGGTCTTGCCATTTCCTTCGTCGCTGATG
AAGAGGACGCAAAAACTTTGAACGACGTTCAAGATCGATTTGAAGTGAAT
GTCAGTGAGCTGCCAGTCGAAATTGATGTTTCCACGTACATTGAAGGTTA
TGAAGCACAACGATAACTATTCACCATCTGGTGTTCCAAAACGATTAATT
TATTAAGATCATAAAATATGCGAACACTTGCAGACTTGCATCGGTGAAAT
CTATCTGAAATTCTATCATCGGATGTAAGAACCAGTAGAATGACACGTTA
ATTTAGGCATATGAATTGTCGCATTCATGCAATTTATGCATCGGTCAGCA
AAATGAGCTGGACAAGAAAGGCTGTCGACgttgatttattttattttgta
aatatagtaacacatacgaaattttttttcacgaagATTAACTTGGCTCA
ACTTTTTTAAATCAcaagaaatgaaagaaatgcgctttgtctttttttcc
ttcctttttaCTGAAAGAAATGTTAAGTTCGTGCGTACTCtcaggttcca
aataaacggacgttaatttttcgaaaattttccaacccctcgGAGCTTAT
TAGGACCCCTCTTCCCATTTATTAAGGTATGTgtaaaag

Coding sequence (CDS) from alignment at sc0000323:122977..135215+

>TCONS_00019260 ID=TCONS_00019260|Name=TCONS_00019260|organism=Clytia hemisphaerica|type=CDS|length=10440bp|location=Sequence derived from alignment at sc0000323:122977..135215+ (Clytia hemisphaerica)
ATGGCCGATGCTACCTTGGAAGAAGATTTCATTCCAGATTACGAAGAAAC
CAGTGACAATGAAGCAGCTGCAGAAGAAGCTGCTCAAAGTACTGAGCCAG
CCAAAAAAGATGTCAAAGGAACCTATGTCAGTATCCATAGCTCCGGCTTT
CGCGATTTCCTTTTGAAACCAGAGTTGTTGCGCGCAATTGTTGATTGTGG
TTTTGAACATCCATCTGAAGTCCAACATGAATGTATCCCTCAAGCAATCC
TTGGAATGGATATTGTCTGTCAAGCCAAAAGTGGTATGGGAAAAACAGCT
GTGTTTGTTTTGGCTACATTGCAACAATTGGAACCTGTTGATGGTCAAGT
CAGTGTTCTTGTCATGTCACATACTCGTGAATTGGCTTTTCAAGTTAGCA
AAGAATATGAAAGATTCTCCAAGTATTTGAACAACATCAAGGTTGCTGTC
TTCTTTGGTGGATTGAGTGTCAAAAAAGATGAACAAGTCTTGAAAACAAA
TTGTCCAAATATTGTTGTTGGAACACCAGGTCGTATCTTAGCATTGGCTC
GTGATAAAGTCCTCAATTTGAAGCacatcaaacatttcattttgGATGAA
TGTGACAAGATGTTGGAGCAACTTGATATGAGAAGAGATGTCCAAGAAAT
TTTCAGGATGACACCACATGAAAAACAAGTCATGATGTTCAGTGCCACCC
TCAGTAAAGAAATGAGAACCGTCTGCAAGAAGTTTATGCAAGATCCAATG
GAAGTTTACGTTGATGATGAAACAAAATTGACCCTCCATGGTTTGACACA
GCATTACTGCAAACTGAAAGATAGCGAGAAGAACAGAAAATTATTCGATC
TTCTTGATGCACTTGAATTTAACCAGgTCATCATCTTTGTTAAGTCAGTT
CAAAGATGCAGTGCCTTATCTGGATTGTTAGTCGAACAGAATTTCCCAGC
CATCGCCATTCATCGATCTATGCCTCAAGAAGAAAGAATCTCGAGATACA
GACAATTCAAAGATTTCCAGAAGAGAATTCTGGTTGCCACCAATTTATTT
GGTCGTGGTATGGATATCGAAAGGGTCAACATCGTCGTCAATTATGACAT
GCCCGAAGATTCAGACACGTATTTGCACAGGGTTGCACGTGCTGGTCGTT
TCGGTACTAAAGGTCTTGCCATTTCCTTCGTCGCTGATGAAGAGGACGCA
AAAACTTTGAACGACGTTCAAGATCGATTTGAAGTGAATGTCAGTGAGCT
GCCAGTCGAAATTGATGTTTCCACGTACATTGAAGGTTATGAAGCACAAC
GATAAATGGCCGATGCTACCTTGGAAGAAGATTTCATTCCAGATTACGAA
GAAACCAGTGACAATGAAGCAGCTGCAGAAGAAGCTGCTCAAAGTACTGA
GCCAGCCAAAAAAGATGTCAAAGGAACCTATGTCAGTATCCATAGCTCCG
GCTTTCGCGATTTCCTTTTGAAACCAGAGTTGTTGCGCGCAATTGTTGAT
TGTGGTTTTGAACATCCATCTGAAGTCCAACATGAATGTATCCCTCAAGC
AATCCTTGGAATGGATATTGTCTGTCAAGCCAAAAGTGGTATGGGAAAAA
CAGCTGTGTTTGTTTTGGCTACATTGCAACAATTGGAACCTGTTGATGGT
CAAGTCAGTGTTCTTGTCATGTCACATACTCGTGAATTGGCTTTTCAAGT
TAGCAAAGAATATGAAAGATTCTCCAAGTATTTGAACAACATCAAGGTTG
CTGTCTTCTTTGGTGGATTGAGTGTCAAAAAAGATGAACAAGTCTTGAAA
ACAAATTGTCCAAATATTGTTGTTGGAACACCAGGTCGTATCTTAGCATT
GGCTCGTGATAAAGTCCTCAATTTGAAGCacatcaaacatttcattttgG
ATGAATGTGACAAGATGTTGGAGCAACTTGATATGAGAAGAGATGTCCAA
GAAATTTTCAGGATGACACCACATGAAAAACAAGTCATGATGTTCAGTGC
CACCCTCAGTAAAGAAATGAGAACCGTCTGCAAGAAGTTTATGCAAGATC
CAATGGAAGTTTACGTTGATGATGAAACAAAATTGACCCTCCATGGTTTG
ACACAGCATTACTGCAAACTGAAAGATAGCGAGAAGAACAGAAAATTATT
CGATCTTCTTGATGCACTTGAATTTAACCAGgTCATCATCTTTGTTAAGT
CAGTTCAAAGATGCAGTGCCTTATCTGGATTGTTAGTCGAACAGAATTTC
CCAGCCATCGCCATTCATCGATCTATGCCTCAAGAAGAAAGAATCTCGAG
ATACAGACAATTCAAAGATTTCCAGAAGAGAATTCTGGTTGCCACCAATT
TATTTGGTCGTGGTATGGATATCGAAAGGGTCAACATCGTCGTCAATTAT
GACATGCCCGAAGATTCAGACACGTATTTGCACAGGGTTGCACGTGCTGG
TCGTTTCGGTACTAAAGGTCTTGCCATTTCCTTCGTCGCTGATGAAGAGG
ACGCAAAAACTTTGAACGACGTTCAAGATCGATTTGAAGTGAATGTCAGT
GAGCTGCCAGTCGAAATTGATGTTTCCACGTACATTGAAGGTTATGAAGC
ACAACGATAAATGGCCGATGCTACCTTGGAAGAAGATTTCATTCCAGATT
ACGAAGAAACCAGTGACAATGAAGCAGCTGCAGAAGAAGCTGCTCAAAGT
ACTGAGCCAGCCAAAAAAGATGTCAAAGGAACCTATGTCAGTATCCATAG
CTCCGGCTTTCGCGATTTCCTTTTGAAACCAGAGTTGTTGCGCGCAATTG
TTGATTGTGGTTTTGAACATCCATCTGAAGTCCAACATGAATGTATCCCT
CAAGCAATCCTTGGAATGGATATTGTCTGTCAAGCCAAAAGTGGTATGGG
AAAAACAGCTGTGTTTGTTTTGGCTACATTGCAACAATTGGAACCTGTTG
ATGGTCAAGTCAGTGTTCTTGTCATGTCACATACTCGTGAATTGGCTTTT
CAAGTTAGCAAAGAATATGAAAGATTCTCCAAGTATTTGAACAACATCAA
GGTTGCTGTCTTCTTTGGTGGATTGAGTGTCAAAAAAGATGAACAAGTCT
TGAAAACAAATTGTCCAAATATTGTTGTTGGAACACCAGGTCGTATCTTA
GCATTGGCTCGTGATAAAGTCCTCAATTTGAAGCacatcaaacatttcat
tttgGATGAATGTGACAAGATGTTGGAGCAACTTGATATGAGAAGAGATG
TCCAAGAAATTTTCAGGATGACACCACATGAAAAACAAGTCATGATGTTC
AGTGCCACCCTCAGTAAAGAAATGAGAACCGTCTGCAAGAAGTTTATGCA
AGATCCAATGGAAGTTTACGTTGATGATGAAACAAAATTGACCCTCCATG
GTTTGACACAGCATTACTGCAAACTGAAAGATAGCGAGAAGAACAGAAAA
TTATTCGATCTTCTTGATGCACTTGAATTTAACCAGgTCATCATCTTTGT
TAAGTCAGTTCAAAGATGCAGTGCCTTATCTGGATTGTTAGTCGAACAGA
ATTTCCCAGCCATCGCCATTCATCGATCTATGCCTCAAGAAGAAAGAATC
TCGAGATACAGACAATTCAAAGATTTCCAGAAGAGAATTCTGGTTGCCAC
CAATTTATTTGGTCGTGGTATGGATATCGAAAGGGTCAACATCGTCGTCA
ATTATGACATGCCCGAAGATTCAGACACGTATTTGCACAGGGTTGCACGT
GCTGGTCGTTTCGGTACTAAAGGTCTTGCCATTTCCTTCGTCGCTGATGA
AGAGGACGCAAAAACTTTGAACGACGTTCAAGATCGATTTGAAGTGAATG
TCAGTGAGCTGCCAGTCGAAATTGATGTTTCCACGTACATTGAAGGTTAT
GAAGCACAACGATAAATGGCCGATGCTACCTTGGAAGAAGATTTCATTCC
AGATTACGAAGAAACCAGTGACAATGAAGCAGCTGCAGAAGAAGCTGCTC
AAAGTACTGAGCCAGCCAAAAAAGATGTCAAAGGAACCTATGTCAGTATC
CATAGCTCCGGCTTTCGCGATTTCCTTTTGAAACCAGAGTTGTTGCGCGC
AATTGTTGATTGTGGTTTTGAACATCCATCTGAAGTCCAACATGAATGTA
TCCCTCAAGCAATCCTTGGAATGGATATTGTCTGTCAAGCCAAAAGTGGT
ATGGGAAAAACAGCTGTGTTTGTTTTGGCTACATTGCAACAATTGGAACC
TGTTGATGGTCAAGTCAGTGTTCTTGTCATGTCACATACTCGTGAATTGG
CTTTTCAAGTTAGCAAAGAATATGAAAGATTCTCCAAGTATTTGAACAAC
ATCAAGGTTGCTGTCTTCTTTGGTGGATTGAGTGTCAAAAAAGATGAACA
AGTCTTGAAAACAAATTGTCCAAATATTGTTGTTGGAACACCAGGTCGTA
TCTTAGCATTGGCTCGTGATAAAGTCCTCAATTTGAAGCacatcaaacat
ttcattttgGATGAATGTGACAAGATGTTGGAGCAACTTGATATGAGAAG
AGATGTCCAAGAAATTTTCAGGATGACACCACATGAAAAACAAGTCATGA
TGTTCAGTGCCACCCTCAGTAAAGAAATGAGAACCGTCTGCAAGAAGTTT
ATGCAAGATCCAATGGAAGTTTACGTTGATGATGAAACAAAATTGACCCT
CCATGGTTTGACACAGCATTACTGCAAACTGAAAGATAGCGAGAAGAACA
GAAAATTATTCGATCTTCTTGATGCACTTGAATTTAACCAGgTCATCATC
TTTGTTAAGTCAGTTCAAAGATGCAGTGCCTTATCTGGATTGTTAGTCGA
ACAGAATTTCCCAGCCATCGCCATTCATCGATCTATGCCTCAAGAAGAAA
GAATCTCGAGATACAGACAATTCAAAGATTTCCAGAAGAGAATTCTGGTT
GCCACCAATTTATTTGGTCGTGGTATGGATATCGAAAGGGTCAACATCGT
CGTCAATTATGACATGCCCGAAGATTCAGACACGTATTTGCACAGGGTTG
CACGTGCTGGTCGTTTCGGTACTAAAGGTCTTGCCATTTCCTTCGTCGCT
GATGAAGAGGACGCAAAAACTTTGAACGACGTTCAAGATCGATTTGAAGT
GAATGTCAGTGAGCTGCCAGTCGAAATTGATGTTTCCACGTACATTGAAG
GTTATGAAGCACAACGATAAATGGCCGATGCTACCTTGGAAGAAGATTTC
ATTCCAGATTACGAAGAAACCAGTGACAATGAAGCAGCTGCAGAAGAAGC
TGCTCAAAGTACTGAGCCAGCCAAAAAAGATGTCAAAGGAACCTATGTCA
GTATCCATAGCTCCGGCTTTCGCGATTTCCTTTTGAAACCAGAGTTGTTG
CGCGCAATTGTTGATTGTGGTTTTGAACATCCATCTGAAGTCCAACATGA
ATGTATCCCTCAAGCAATCCTTGGAATGGATATTGTCTGTCAAGCCAAAA
GTGGTATGGGAAAAACAGCTGTGTTTGTTTTGGCTACATTGCAACAATTG
GAACCTGTTGATGGTCAAGTCAGTGTTCTTGTCATGTCACATACTCGTGA
ATTGGCTTTTCAAGTTAGCAAAGAATATGAAAGATTCTCCAAGTATTTGA
ACAACATCAAGGTTGCTGTCTTCTTTGGTGGATTGAGTGTCAAAAAAGAT
GAACAAGTCTTGAAAACAAATTGTCCAAATATTGTTGTTGGAACACCAGG
TCGTATCTTAGCATTGGCTCGTGATAAAGTCCTCAATTTGAAGCacatca
aacatttcattttgGATGAATGTGACAAGATGTTGGAGCAACTTGATATG
AGAAGAGATGTCCAAGAAATTTTCAGGATGACACCACATGAAAAACAAGT
CATGATGTTCAGTGCCACCCTCAGTAAAGAAATGAGAACCGTCTGCAAGA
AGTTTATGCAAGATCCAATGGAAGTTTACGTTGATGATGAAACAAAATTG
ACCCTCCATGGTTTGACACAGCATTACTGCAAACTGAAAGATAGCGAGAA
GAACAGAAAATTATTCGATCTTCTTGATGCACTTGAATTTAACCAGgTCA
TCATCTTTGTTAAGTCAGTTCAAAGATGCAGTGCCTTATCTGGATTGTTA
GTCGAACAGAATTTCCCAGCCATCGCCATTCATCGATCTATGCCTCAAGA
AGAAAGAATCTCGAGATACAGACAATTCAAAGATTTCCAGAAGAGAATTC
TGGTTGCCACCAATTTATTTGGTCGTGGTATGGATATCGAAAGGGTCAAC
ATCGTCGTCAATTATGACATGCCCGAAGATTCAGACACGTATTTGCACAG
GGTTGCACGTGCTGGTCGTTTCGGTACTAAAGGTCTTGCCATTTCCTTCG
TCGCTGATGAAGAGGACGCAAAAACTTTGAACGACGTTCAAGATCGATTT
GAAGTGAATGTCAGTGAGCTGCCAGTCGAAATTGATGTTTCCACGTACAT
TGAAGGTTATGAAGCACAACGATAAATGGCCGATGCTACCTTGGAAGAAG
ATTTCATTCCAGATTACGAAGAAACCAGTGACAATGAAGCAGCTGCAGAA
GAAGCTGCTCAAAGTACTGAGCCAGCCAAAAAAGATGTCAAAGGAACCTA
TGTCAGTATCCATAGCTCCGGCTTTCGCGATTTCCTTTTGAAACCAGAGT
TGTTGCGCGCAATTGTTGATTGTGGTTTTGAACATCCATCTGAAGTCCAA
CATGAATGTATCCCTCAAGCAATCCTTGGAATGGATATTGTCTGTCAAGC
CAAAAGTGGTATGGGAAAAACAGCTGTGTTTGTTTTGGCTACATTGCAAC
AATTGGAACCTGTTGATGGTCAAGTCAGTGTTCTTGTCATGTCACATACT
CGTGAATTGGCTTTTCAAGTTAGCAAAGAATATGAAAGATTCTCCAAGTA
TTTGAACAACATCAAGGTTGCTGTCTTCTTTGGTGGATTGAGTGTCAAAA
AAGATGAACAAGTCTTGAAAACAAATTGTCCAAATATTGTTGTTGGAACA
CCAGGTCGTATCTTAGCATTGGCTCGTGATAAAGTCCTCAATTTGAAGCa
catcaaacatttcattttgGATGAATGTGACAAGATGTTGGAGCAACTTG
ATATGAGAAGAGATGTCCAAGAAATTTTCAGGATGACACCACATGAAAAA
CAAGTCATGATGTTCAGTGCCACCCTCAGTAAAGAAATGAGAACCGTCTG
CAAGAAGTTTATGCAAGATCCAATGGAAGTTTACGTTGATGATGAAACAA
AATTGACCCTCCATGGTTTGACACAGCATTACTGCAAACTGAAAGATAGC
GAGAAGAACAGAAAATTATTCGATCTTCTTGATGCACTTGAATTTAACCA
GgTCATCATCTTTGTTAAGTCAGTTCAAAGATGCAGTGCCTTATCTGGAT
TGTTAGTCGAACAGAATTTCCCAGCCATCGCCATTCATCGATCTATGCCT
CAAGAAGAAAGAATCTCGAGATACAGACAATTCAAAGATTTCCAGAAGAG
AATTCTGGTTGCCACCAATTTATTTGGTCGTGGTATGGATATCGAAAGGG
TCAACATCGTCGTCAATTATGACATGCCCGAAGATTCAGACACGTATTTG
CACAGGGTTGCACGTGCTGGTCGTTTCGGTACTAAAGGTCTTGCCATTTC
CTTCGTCGCTGATGAAGAGGACGCAAAAACTTTGAACGACGTTCAAGATC
GATTTGAAGTGAATGTCAGTGAGCTGCCAGTCGAAATTGATGTTTCCACG
TACATTGAAGGTTATGAAGCACAACGATAAATGGCCGATGCTACCTTGGA
AGAAGATTTCATTCCAGATTACGAAGAAACCAGTGACAATGAAGCAGCTG
CAGAAGAAGCTGCTCAAAGTACTGAGCCAGCCAAAAAAGATGTCAAAGGA
ACCTATGTCAGTATCCATAGCTCCGGCTTTCGCGATTTCCTTTTGAAACC
AGAGTTGTTGCGCGCAATTGTTGATTGTGGTTTTGAACATCCATCTGAAG
TCCAACATGAATGTATCCCTCAAGCAATCCTTGGAATGGATATTGTCTGT
CAAGCCAAAAGTGGTATGGGAAAAACAGCTGTGTTTGTTTTGGCTACATT
GCAACAATTGGAACCTGTTGATGGTCAAGTCAGTGTTCTTGTCATGTCAC
ATACTCGTGAATTGGCTTTTCAAGTTAGCAAAGAATATGAAAGATTCTCC
AAGTATTTGAACAACATCAAGGTTGCTGTCTTCTTTGGTGGATTGAGTGT
CAAAAAAGATGAACAAGTCTTGAAAACAAATTGTCCAAATATTGTTGTTG
GAACACCAGGTCGTATCTTAGCATTGGCTCGTGATAAAGTCCTCAATTTG
AAGCacatcaaacatttcattttgGATGAATGTGACAAGATGTTGGAGCA
ACTTGATATGAGAAGAGATGTCCAAGAAATTTTCAGGATGACACCACATG
AAAAACAAGTCATGATGTTCAGTGCCACCCTCAGTAAAGAAATGAGAACC
GTCTGCAAGAAGTTTATGCAAGATCCAATGGAAGTTTACGTTGATGATGA
AACAAAATTGACCCTCCATGGTTTGACACAGCATTACTGCAAACTGAAAG
ATAGCGAGAAGAACAGAAAATTATTCGATCTTCTTGATGCACTTGAATTT
AACCAGgTCATCATCTTTGTTAAGTCAGTTCAAAGATGCAGTGCCTTATC
TGGATTGTTAGTCGAACAGAATTTCCCAGCCATCGCCATTCATCGATCTA
TGCCTCAAGAAGAAAGAATCTCGAGATACAGACAATTCAAAGATTTCCAG
AAGAGAATTCTGGTTGCCACCAATTTATTTGGTCGTGGTATGGATATCGA
AAGGGTCAACATCGTCGTCAATTATGACATGCCCGAAGATTCAGACACGT
ATTTGCACAGGGTTGCACGTGCTGGTCGTTTCGGTACTAAAGGTCTTGCC
ATTTCCTTCGTCGCTGATGAAGAGGACGCAAAAACTTTGAACGACGTTCA
AGATCGATTTGAAGTGAATGTCAGTGAGCTGCCAGTCGAAATTGATGTTT
CCACGTACATTGAAGGTTATGAAGCACAACGATAAATGGCCGATGCTACC
TTGGAAGAAGATTTCATTCCAGATTACGAAGAAACCAGTGACAATGAAGC
AGCTGCAGAAGAAGCTGCTCAAAGTACTGAGCCAGCCAAAAAAGATGTCA
AAGGAACCTATGTCAGTATCCATAGCTCCGGCTTTCGCGATTTCCTTTTG
AAACCAGAGTTGTTGCGCGCAATTGTTGATTGTGGTTTTGAACATCCATC
TGAAGTCCAACATGAATGTATCCCTCAAGCAATCCTTGGAATGGATATTG
TCTGTCAAGCCAAAAGTGGTATGGGAAAAACAGCTGTGTTTGTTTTGGCT
ACATTGCAACAATTGGAACCTGTTGATGGTCAAGTCAGTGTTCTTGTCAT
GTCACATACTCGTGAATTGGCTTTTCAAGTTAGCAAAGAATATGAAAGAT
TCTCCAAGTATTTGAACAACATCAAGGTTGCTGTCTTCTTTGGTGGATTG
AGTGTCAAAAAAGATGAACAAGTCTTGAAAACAAATTGTCCAAATATTGT
TGTTGGAACACCAGGTCGTATCTTAGCATTGGCTCGTGATAAAGTCCTCA
ATTTGAAGCacatcaaacatttcattttgGATGAATGTGACAAGATGTTG
GAGCAACTTGATATGAGAAGAGATGTCCAAGAAATTTTCAGGATGACACC
ACATGAAAAACAAGTCATGATGTTCAGTGCCACCCTCAGTAAAGAAATGA
GAACCGTCTGCAAGAAGTTTATGCAAGATCCAATGGAAGTTTACGTTGAT
GATGAAACAAAATTGACCCTCCATGGTTTGACACAGCATTACTGCAAACT
GAAAGATAGCGAGAAGAACAGAAAATTATTCGATCTTCTTGATGCACTTG
AATTTAACCAGgTCATCATCTTTGTTAAGTCAGTTCAAAGATGCAGTGCC
TTATCTGGATTGTTAGTCGAACAGAATTTCCCAGCCATCGCCATTCATCG
ATCTATGCCTCAAGAAGAAAGAATCTCGAGATACAGACAATTCAAAGATT
TCCAGAAGAGAATTCTGGTTGCCACCAATTTATTTGGTCGTGGTATGGAT
ATCGAAAGGGTCAACATCGTCGTCAATTATGACATGCCCGAAGATTCAGA
CACGTATTTGCACAGGGTTGCACGTGCTGGTCGTTTCGGTACTAAAGGTC
TTGCCATTTCCTTCGTCGCTGATGAAGAGGACGCAAAAACTTTGAACGAC
GTTCAAGATCGATTTGAAGTGAATGTCAGTGAGCTGCCAGTCGAAATTGA
TGTTTCCACGTACATTGAAGGTTATGAAGCACAACGATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010813XLOC_010813Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019260-exon-sc0000323-1491911889:122977..123388TCONS_00019260-exon-sc0000323-1491911889:122977..123388Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1510915933:122977..123388TCONS_00019260-exon-sc0000323-1510915933:122977..123388Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1575043694:122977..123388TCONS_00019260-exon-sc0000323-1575043694:122977..123388Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1491911889:127624..127986TCONS_00019260-exon-sc0000323-1491911889:127624..127986Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1510915933:127624..127986TCONS_00019260-exon-sc0000323-1510915933:127624..127986Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1575043694:127624..127986TCONS_00019260-exon-sc0000323-1575043694:127624..127986Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1491911889:128046..128087TCONS_00019260-exon-sc0000323-1491911889:128046..128087Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1510915933:128046..128087TCONS_00019260-exon-sc0000323-1510915933:128046..128087Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1575043694:128046..128087TCONS_00019260-exon-sc0000323-1575043694:128046..128087Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1491911889:128363..128481TCONS_00019260-exon-sc0000323-1491911889:128363..128481Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1510915933:128363..128481TCONS_00019260-exon-sc0000323-1510915933:128363..128481Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1575043694:128363..128481TCONS_00019260-exon-sc0000323-1575043694:128363..128481Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1491911889:129112..129243TCONS_00019260-exon-sc0000323-1491911889:129112..129243Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1510915933:129112..129243TCONS_00019260-exon-sc0000323-1510915933:129112..129243Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1575043694:129112..129243TCONS_00019260-exon-sc0000323-1575043694:129112..129243Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1491911889:129715..129824TCONS_00019260-exon-sc0000323-1491911889:129715..129824Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1510915933:129715..129824TCONS_00019260-exon-sc0000323-1510915933:129715..129824Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1575043694:129715..129824TCONS_00019260-exon-sc0000323-1575043694:129715..129824Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1491911889:134141..134285TCONS_00019260-exon-sc0000323-1491911889:134141..134285Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1510915933:134141..134285TCONS_00019260-exon-sc0000323-1510915933:134141..134285Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1575043694:134141..134285TCONS_00019260-exon-sc0000323-1575043694:134141..134285Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1491911889:134569..135215TCONS_00019260-exon-sc0000323-1491911889:134569..135215Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1510915933:134569..135215TCONS_00019260-exon-sc0000323-1510915933:134569..135215Clytia hemisphaericaexon
TCONS_00019260-exon-sc0000323-1575043694:134569..135215TCONS_00019260-exon-sc0000323-1575043694:134569..135215Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019260-proteinTCONS_00019260-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000323supercontigsc0000323:122977..135215 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
401.942	400.42	657.905	636.364	908.443	750.772	564.577	577.765	285.578	310.743	257.509	263.771	251.799	239.253	294.292	304.526	389.835	384.702	80.5682	102.135	264.41	267.327	317.344	301.677	313.533	358.028	160.895	139.322	188.798	205.836
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
Blast
[Close]
BLAST of TCONS_00019260 vs. Swiss-Prot (Human)
Match: DX39B (Spliceosome RNA helicase DDX39B OS=Homo sapiens GN=DDX39B PE=1 SV=1)

HSP 1 Score: 742.265 bits (1915), Expect = 0.000e+0
Identity = 351/394 (89.09%), Postives = 377/394 (95.69%), Query Frame = 1 
Query:  295 KKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIVCQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMSHTRELAFQVSKEYERFSKYLNNIKVAVFFGGLSVKKDEQVLKTNCPNIVVGTPGRILALARDKVLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEMRTVCKKFMQDPMEVYVDDETKLTLHGLTQHYCKLKDSEKNRKLFDLLDALEFNQVIIFVKSVQRCSALSGLLVEQNFPAIAIHRSMPQEERISRYRQFKDFQKRILVATNLFGRGMDIERVNIVVNYDMPEDSDTYLHRVARAGRFGTKGLAISFVADEEDAKTLNDVQDRFEVNVSELPVEIDVSTYIE 1476
            KKDVKG+YVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVLATLQQLEPV GQVSVLVM HTRELAFQ+SKEYERFSKY+ N+KVAVFFGGLS+KKDE+VLK NCP+IVVGTPGRILALAR+K LNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKE+R VC+KFMQDPME++VDDETKLTLHGL Q+Y KLKD+EKNRKLFDLLD LEFNQV+IFVKSVQRC AL+ LLVEQNFPAIAIHR MPQEER+SRY+QFKDFQ+RILVATNLFGRGMDIERVNI  NYDMPEDSDTYLHRVARAGRFGTKGLAI+FV+DE DAK LNDVQDRFEVN+SELP EID+S+YIE
Sbjct:   32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIE 425
The following BLAST results are available for this feature:
BLAST of TCONS_00019260 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DX39B0.000e+089.09Spliceosome RNA helicase DDX39B OS=Homo sapiens GN... [more]
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