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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019294 ID=TCONS_00019294|Name=TCONS_00019294|organism=Clytia hemisphaerica|type=transcript|length=764bp
CATACATGAATTAAAAAGATATGTTTTATTTGAATGAATTTATAAGATGC
TAAAATTAGTATttagttaatatttttgtagaGTTTGTCTTTTGTTATGC
TGAATTTTGATAGGAATAGAAATCACTTGTGAGAAGAAAGGCCTAAGACT
TCactcttttgaaattttgttaacattaaattttcttttgatgctAATAA
AATTCAGTCCTGGTAAAACGGACTAAACAATATTGTTCAATGTTTCGAAA
AGCATTTCTTGATTATGTGCTTCTTTCCTTTATTAATGAAGCATTTATTA
GAGTCGataagattttttaagaattttttttagaatttttaagtTATTGA
AATAAACTTGTGTTATTTTATTATTCTAGTTTTGTATTATTTCTTTATTT
ACTGATTTGATTTTTTCATTTAGAATGTCTTATTTTAGTCAAAACTTATA
TTCTGAAACCtactgtaaaaatataaatgaattGATACTTTTCATGCACC
ACAGAATgataatgaacaatgattaaaaatgatatttaaCTTTAATAGAA
TAACAAAtaaatatggacaaaagtgatatTATTGTTGGTGTTTGTAATGG
TGAATTTGgatcaaatttattttaaagtcGTCATTCGGTATGATGTCACC
CTCGACAGAAACGTATGAATAATACCTTGTCAATTATGAATCATATTTTG
GATATTGAATTGCATTATAATCcttTACACTTGGATGCACATTCATTTGT
CACGAAAACTCCNN Run BLAST on NCBI transcript from alignment at sc0000323:389111..390221- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019294 ID=TCONS_00019294|Name=TCONS_00019294|organism=Clytia hemisphaerica|type=transcript|length=1111bp|location=Sequence derived from alignment at sc0000323:389111..390221- (Clytia hemisphaerica)
CATACATGAATTAAAAAGATATGTTTTATTTGAATGAATTTATAAGATGC
TAAAATTAGTATTTAGTTAATATTTTTGTAGAGTTTGTCTTTTGTTATGC
TGAATTTTGATAGGAATAGAAATCACTTGTGAGAAGAAAGGCCTAAGACT
TCACTCTTTTGAAATTTTGTTAACATTAAATTTTCTTTTGATGCTAATAA
AATTCAGTCCTGGTAAAACGGACTAAACAATATTGTTCAATGTTTCGAAA
AGCATTTCTTGATTATGTGCTTCTTTCCTTTATTAATGAAGCATTTATTA
GAGTCGATAAGATTTTTTAAGAATTTTTTTTAGAATTTTTAAGTTATTGA
AATAAACTTGTGTTATTTTATTATTCTAGTTTTGTATTATTTCTTTATTT
ACTGATTTGATTTTTTCATTTAGAATGTCTTATTTTAGTCAAAACTTATA
TTCTGAAACCTACTGTAAAAATATAAATGAATTGATACTTTTCATGCACC
ACAGAATGATAATGAACAATGATTAAAAATGATATTTAACTTTAATAGAA
TAACAAATAAATATGGACAAAAGTGATATTATTGTTGGTGTTTGTAATGG
TGAATTTGGATCAAATTTATTTTAAAGTCGTCATTCGGTATGATGTCACC
CTCGACAGAAACGTATGAATAATACCTTGTCAATTATGAATCATATTTTG
GATATTGAATTGCATTATAATCGTGAGTATAACAAAATTTAACTATTCAA
TTTCTAGTCATCTTTTTTCACTATGAAGAAATTGGAAAAATGGTTTTGAA
ATTCATAAGGGTATAAGGTTCCTTATTGTTCCGAACATACATCTTGAAAT
TTCTGTCTGCCACTTTTGATAATTATACAAATTAAATCTTAGCTTAGTTG
GGAAAGTAATCGCCCGCCAAGCGAGAGGTCGTAAGTTCAATCCCCACTCG
ATTTGTTACCTTTGAGAGAATTGGGAAGTACATTAGTGCGGAATCTATCG
ACTCTTATAAACGTTTATTTTCTTTTATCAAAAATCCTCTAATTTCATTG
TTTTTTTTTTCATTTTAAGCTTTACACTTGGATGCACATTCATTTGTCAC
GAAAACTCCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019294-exon-sc0000323-1575043694:389500..390221 | TCONS_00019294-exon-sc0000323-1575043694:389500..390221 | Clytia hemisphaerica | exon |
| TCONS_00019294-exon-sc0000323-1575043694:389111..389152 | TCONS_00019294-exon-sc0000323-1575043694:389111..389152 | Clytia hemisphaerica | exon |
| TCONS_00019294-exon-sc0000323-1510915933:389500..390221 | TCONS_00019294-exon-sc0000323-1510915933:389500..390221 | Clytia hemisphaerica | exon |
| TCONS_00019294-exon-sc0000323-1510915933:389111..389152 | TCONS_00019294-exon-sc0000323-1510915933:389111..389152 | Clytia hemisphaerica | exon |
| TCONS_00019294-exon-sc0000323-1491911889:389500..390221 | TCONS_00019294-exon-sc0000323-1491911889:389500..390221 | Clytia hemisphaerica | exon |
| TCONS_00019294-exon-sc0000323-1491911889:389111..389152 | TCONS_00019294-exon-sc0000323-1491911889:389111..389152 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000323 | supercontig | sc0000323:389111..390221 - |
Blast
The following BLAST results are available for this feature:
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