TCONS_00019390 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019390
Unique NameTCONS_00019390
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2116

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019390 ID=TCONS_00019390|Name=TCONS_00019390|organism=Clytia hemisphaerica|type=transcript|length=2116bp
ATTTAGGGAGCTATGGCCAGGTATTAGCAGATGCCAAGAAAGAACTACGG
TTTCTGCTGGTTTACTTGCACGCTCCCCACCACCAAAGCACTCCTGAATT
TTGCAGGAATGTACTGAGTAATGAAAATTTCCGTGAATACACTATCAATA
GACGTCTTTTGTTTTGGGGCTGCGATATTTCAACTAACGAAGGGCACAGA
GTTTCAAGGGCAATGAGGGAGACAACTTACCCGTTCTTAGCCGTCGTCTG
TTTACGTGAAGGCCGTATGACCGTCGTTTGGCGAATCGAAGGATGTCTTG
ATTTGGATCGTCTGATAGCAGTTTGTGAGCAAGTGTTCAATGATAATGAA
GCAGCTCTTGTCGCTGCACAGGCAGAAAGGAACGAGAGAAACTTCAGTCG
TTCTTTACGAGAAGAACAAGATCAAGATTTTCTGAAATCTCTGGAAGAGG
ACAAGAAGAAGAGCgctttgaagaaagaaaaagaagacgcCATCAAAGAA
GTGGAGAGagtaaagaaagaaaaggaGGACGAACGGCTAAGAAAATTAGA
GGAATTAGCCAATAGACGTCAAGTATGCCGCACGAAATTCGAATCCCTGG
TCGAACCTTCTCAAGGAGATGAGGGTGTGGTCAAACTAAGGATACGTTTA
TCGAATGGTGAAAATATGCAAAGATTCTTCATGAAAAGTGATACATTACA
GctATTATACGATTATGTTCTATCTAACGATGCATCACCGAGTGAATTCC
AACTGCGCACTAGTTTCCCAAGGAATGTTTACCCCTTAGATGAGACGAAC
TGTGAACGGACTTTAGAGTCAATAGGAATAAAAACATCAACACAATTCTT
AGTGGAAGATTTGACTGAAGAAAGCTCTGGTGATGAGGAGGAGGATGACG
AATGAAaagagaaattattttgatgatggTTAGAAATTTATTTAATTACC
TTTTAGAGGTGGAAATTTTGTTGATGGGAATTTAACTTCGCGGATGGCCG
AGAAAGATTTTTTCTGAGGGAATTTCATTTGGCAgatggaaagaaaaata
attttttcggtAATTATTTTGGTGCTCGAAGGATACTTTGGGCCAACAAT
CATCATTAAATAAACAAAATCTATTCCTAGGCTCTGAAATAGCATAAATA
TAGATCCACCAAATTTATATTTGGTcacaattttttcctttttaagaTAC
AAAATTTGGAAAGCAGCGATGTGTAGCTAgtgggaaaatttttataatca
tTCTTCTTTTGTTAAATGTTAAACCCAGTTaaaaagttaaggttcctttt
ataaagaaaaaaattaaagaatttgaaagaaaataacaaaatatattAAA
CTAAGCGCCGGCTTAAAAAGAACCGATAAGTTTTgtgctcttccagaaaa
aaattgaatattgcagTGGAGGATAtaccaattttttggaaatttactcc
cccggacaacagatctcacccccggacaagcatcagttgaacattcaaaa
attcaaatttacccctaaacagagcaagtttgcaaccaaaacaaggcaaa
ttttgcagattttttacTACCCCCCcgaacaaaatatccaatatatcctc
cacccccttgtacaaagattttctggaagagccctttACAAGAATGACTT
CAAACTTTAATCTCTTCGATTTGCGGGTTTATAcgcaattatgaaaaaca
taGCTAGAGATGTAGATTTTACaccaaatttgtttttcttattagttttg
aaaaatgtcttaCAGTTATATTGTGTagttattttattttacaaattacT
CTTTAAATTTTTGACTATAAAAAGTTTAAGCTTGATAGTTGGGTATATCC
ActgttttacaaaaaacaattttcatgcTGTcaatgttaaaggttttgtt
tttaaataagagtgatatcgtttgcttactcatcaattttaatttacaag
cattttcgcattggattgacacggatgtggagcaagattggtcagaaaga
ggaaaagaaaaacgttttttgcttatatcagcataatataacaataggaa
gacactgtcctgatatgaaatatgtgtctgatatgaaacgggaacactta
tgtaaaaagaaaacct
Run BLAST on NCBI

transcript from alignment at sc0000326:309461..317932+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019390 ID=TCONS_00019390|Name=TCONS_00019390|organism=Clytia hemisphaerica|type=transcript|length=8472bp|location=Sequence derived from alignment at sc0000326:309461..317932+ (Clytia hemisphaerica)
ATTTAGGGAGCTATGGCCAGGTACCGAACTCACATTCAATCTCGTCCCGT GTATCCAAGCCTTTATTTAGGGAGCTATGGCCAGGTACCGAACTCACATT CAatctcgtccccgtgtatccaaGCCTTTTTTTAGGGAGCTATGGCCAGG TACCAAACTCACATTCAATCTCGTCCCGTGTATCCAAGCCTTTATTTAGG GAGCTATGGCCAGGTGCCGAACTCACATTCAATCTAGTCCCCGTGTATCC AAGCCTTTATTTAGGGAGCTATGGCCAGGTACTGAACCCACATTCAATCT CGTCCCGTGTATCCAAGGCTTTATTTAGGGAGCTATGGCAAGGTACCAAA CTCACATTCAATCTCGTCCCGTGTATCTAAGGCTTTATTTAGGGAGCTAT GGCCAGGTACCGAACTCACATTCAATCTAGTCCCCGTGTATCCAAGCCTT TATTTAGGGAGCTATGGCCAGGTACTGAACTCACATTCAATCTCGTCCCG TGTATCCAAGCCTTTATTTAGGGAGCTATGGCCAGGTACCGAACTCACAT TCAATCTCGTCCCGTGTATCCAAGGCTTTATTTAGGGAGCTATGGCCAGG TACCGAACTCACATTCAATCTCGTCCCGTGTATCCAAGGCTTTATTTAGG GAGCTATGGCCAGGTACCAAACTCACATTCAatctcgtccccgtgtatcc aaGCCTTTATTTAGGGAGCTATGGCCAGGTACTGAACTCACATTCAATCT CGTCCCGTGTATCCAAGCCTTTATTTAGGGAGCTATTGCCAGGTACCGAA CTCACATTCAatctcgtccccgtgtatccaaGGCTTTATTTAGGGAGCTA TGGCCAGGTACCGAACTCACATTCAATCTCGTCCCGTGTATCCAAACCTT TATTTAGGGAGCTATGGCCAGGTACCAAACTCACATTCAATCTCGTCCCG TGTATccaaggctttatttacgttattgATTGACACCAGagaattatcta gcgctatcagggACCAAGGTTGACTCATATGTTATGATTCTGAATCATTC GTATAAGGCCAGTGCAGAAAAGTGTCCAGTTAGACAAAGAAGATTTGGAT CGACACAGTTTAGCTTTTTTATTAAGTATCACCCAATTTATCCATTCTTG TGATAATGTagtaatattttgaatattagAGCAGGCATAGAGTGGGCAGA AAGAAATTCATTGCAGAGGGCAGAGGGCAGTGCtttgaatttaaaaagtc aactttctacccactttaattcacaatcaGAATAAGCAGGGCTCCGACTT ATATCTTCTACTTCTTCACCAACCTAACTTCTTATGACCATTTCAATAAC TTGAATTTGTCATATTTTATCagtttataaaattttcaattcactATTTT CACAACTGATGATTGCAGAAACATGAACCTCAGAGTCTTGTGACAAATTG TATCTACATCTTCTACTTTTTCTAGGTATTAGCAGATGCCAAGAAAGAAC TACGGTTTCTGCTGGTTTACTTGCACGCTCCCCACCACCAAAGCACTCCT GAATTTTGCAGGTAAGTACGAGAACACCATTTTTATTCACCAACTTATCT GTACAAACAACATTGAGAACATGTATGTAACTTAAGATTGAGCCGTTTGG GCTATTGTAAACCGAAGGAACTCATACGAAAAACACATTTAATTTGCTTT TTGATTCCCCAAATAGTTTCAAAAAACAACTATGAATACATaaacagttg acgctctctaatgtGAGTTTCAACCTACCTACCTAGGTCGGGCGCCAGTC CTGACCAAAAGTTTCAAAGGTAGCTGGATTTTAATCGAATAAGGaagtgt atcgaatagtagagcatATTTTATGATAATTTCATGCAGGCGGAGATtct caatattatcgaataatataAACATGGAATTTTAAAACTCTACGTTTTTC AATTTCTATAGGAATGTACTGAGTAATGAAAATTTCCGTGAATACACTAT CAATAGACGTCTTTTGTTTTGGGGCTGCGATATTTCAACTAACGAAGGGC ACAGAGGTAATtacgttgtttttttaagaacatccaaaatttttgaagac ttcggatgctccaaattttttgagtttttttaagccTACGAATGTTCtaa acatattcttattttcaccattttttgagtatttctgGCCGTTTCTCTAA AAAatagtgttttagagtccggaTAGCCTTAAAATTATCTTTAACTTGTT cgtaatattttggccatcggaGACTTATTATTCTCAATAGTTTGTTATTA GTTAAAAAAACTCGAAAGTTTATCTGTGATTTTTAtcaagaaatagaaga aaaactaactttccctaagaaatcgagtgtttaAGAGTCCAGAAagcctt aatatgttcttaacttgttcttaatattatgGCCATCGAAGATGTAGTTT TTCTTAGTTAAAAAAATACGTGTATTCGTTCAGGTTTTTGAAGTGAATAA GAAAACTCGTTTATCTGTGATTTTTtatcaagaaataaagaactaactta TACAATTGCTACACCGTGTTTCATGCTGGTGCAATCTTCGGCCAATACAG GTGTATTGTAGATTTATAGGGGTTAGGAGATTGTACTAGGTAACCCGGCG AAGCCCATAAAGCCCATACACTGCATTGCCTGGAGATTGCGCCAGCATGA AGCACCGTGTAGCAATTGTTagttacagttgacgctctctaattcgatct tcaaggggaattggattttcatcaaagGGAgattatcgaataagggagcg tcgtttattaGAGTTTtctgttgacggggactttaaatttcatcgaataa gggagcctatcgaatagtagaacgtcgaattagagagcgtcaactgtagt tctTGATATTTCGCTCGAATTTTTTTCGAGAATTTTACTTAGAAAACTGT TCCGAAATATCACACCAACTTTATCACACTGGGAGTAATCTTGGGGATAC TGGATGATGGgatattcaataaaaaaacaCAGATCTGTTAATTAGGACGG ACATTTACCTACTAGAAGAATAATCTTTCTTTACTTCTCTTTTCAGTTTC AAGGGCAATGAGGGAGACAACTTACCCGTTCTTAGCCGTCGTCTGTTTAC GTGAAGGCCGTATGACCGTCGTTTGGCGAATCGAAGGtaaaaatgtcttt ttcttGCAATGTTATAATTTCATCTGTTATGTAgtcttttcaattttatt ttaagagTTTATTTTACAGTATGAGTctccttaaaggttttgtttttaaa taaaagtgatatcaTTTACttactaatcaattttaattcgccaacttttt cacattggattgatacGGATgtagagcaagattggtcagatgaaaagaaa aaccttttttggcTTGTATCAGCATAATTTAACAATAGGTGgacactgtc ccgatatgaaatatgtgtctgatatgaaacgggaacacttatgtaaacct ttaactcgaaccttaATAACTCGAtcgtctataactcgaacaaattttct cgTCCctaacaataccttataaaccttactccacatcttgaaatttcctt aactcgaacaaatttggtTTCTCCGTTCGAATTCGAGTTTTAGAGACTGC ACTGTATTGTCAATTTTATTCACAAGTAGGGGTCGATTTTCCTGGTTCAA ATAGAATAAATTTGAAATACTGAGTATAGAGGTTATTCGGTTTGGTTTCA AAAGTGACGTAACTTGCCATTGTGTGGTGAGAAAACATTCAAATTATAAT ACCCGACTCGAAAGTGAAAAGATTCTTACTTAATTGCGGTTCTTTTCCAG GATGTCTTGATTTGGATCGTCTGATAGCAGTTTGTGAGCAAGTGTTCAAT GATAATGAAGCAGCTCTTGTCGCTGCACAGGCAGAAAGGTAAAAgatcta tttttttttcgttaaCAAATCTTTTATAAAAGAATAAATACGGTTCGTAG CGTGGAAGGTCATTACACAAGATAAATTTTCAACCATAATTGGGGAATGT CTACGTTTAATTGAACCGGATACTATCAAATGCATGGGTCGTGGCGACTC TAGGTCCCTACTGGTGGTATTCAGTCAAAGTGTGACGTAACGTACCCCTT TTTCTGGAATGGACGAAATAcagaatgtcccaaaaaagcggagaaatttt tatataaaataaaatcctcaaaacttctCTGGACACACTGTACCATTTTT TGGAATGTCCGAAATACACCGTTCAATGTCTTATCGGCCGATTACCGACT GGTATGTAATGGATTTGAAAGAATCTAGGCTATATCGAGTTCGACTGTCT GTTTTAAAAATTCTTCTACGAGAAGGGTgaataatataaataaaaaacat aagcTAAAAAGATGTTGAGTGCTTCGTAGGGAAAAAAGGGTCATTAGCCT GCCTTTGATAAACCATTTGTTAAAATTGTATGTTTATTTTTGTCTTCAGA AATGAGAAGGAGTCGATCCTTTACGGGGAAAGCAAGATCAATGAAATGAA GCCTTTCCCCTTAGTCACATGAGTTAAGAAAGGGACTTTGGGTCATTAGC CTGCCTTTGTTAAACCATTTGTTAAAATGTGTACGTTAATTTTCCCCTTC AGGAACGAGAGAAACTTCAGTCGTTCTTTACGAGAAGAACAAGATCAAGA TTTTCTGAAATCTCTGGAAGAGGACAAGAAGAAGAGCgctttgaagaaag aaaaagaagacgcCATCAAAGAAGTGGAGAGagtaaagaaagaaaaggaG GACGAACGGCTAAGAAAATTAGAGGTAAAATAAATTAGAGTCTACAGTAC TTCTGGCTaaaccattgatttcaaagccccgaaggggctagatccGAAGC TCCAAGATGGGAAATGAAGTCACATATTTTCCATCCAGAACACGTGACCC GtgtgttttttcaaacaaaatttctaaatacgGGCCAAAACTTAAGACtt ccactttttcttgcttgagaaaggttaaagattcgcaCCTATCCCCTTCG GGGCGTCAAACTCAATAGGCTAAACTTTGCTATTTGATGACGCTGAATAA GAGCATTTGACGAGGGCGCTATTTTGGAGAAAGAAcacgaaaattctaaa taataataaaaatgcttggatttaaTAAGAGACTAacactaaaaacagat ttggaaCATACATTGCCATTTCCATTTTTTACCTTCCAACTAGAATCTGG CAGACTGTTTTACAGCCTCTCTTAAGCCAAAGCTTCAAATGGAGAACTAC CTTAGGCAACCGGGCTACTTAATTTCGcaatccagtctatcaaaaagcct tAAGTAGACGTAGACCCCGGGCTAGGGGTCAGATTTCCCTCCTTACAATC TCTACCAATCTCTATAATGGTCAtatcttttctcttttctttgtGTTTCA TTAGCAGATATTTCTAATTAAATCTGTATGGTAATAtgtattttcttctt ctttttttcaatcagGAATTAGCCAATAGACGTCAAGTATGCCGCACGAA ATTCGAATCCCTGGTCGAACCTTCTCAAGGAGATGAGGGTGTGGTCAAAC TAAGGATACGTTTATCGAATGGTGAAAATATGCAAAGATTCTTCATGAAA AGTGATACATTACAGGTAGGTTTTTTGTTTGTATGTTCCATTCTTTTTCA TAACATGTGTCttcaatgtcttctgacattacatcacggacccaacagct gatttgttgtaagtgacgtaaaaagagtcaatacgtcactttcaaccaat cagctgttgggtccgtggcagacattgcaatggtgcatatcattgATATG TagtttccgccattatggaagcgaGGGTTTGATTTCCATAACGGCGGAAA ATAAGTAACTAAACAAACAGGCCACTACAGTGGATTCTCCATAACTCGAT CGCGCACtggaaaacaaatttgtggTGACCTCTGAACTGTCATAGATGGA TCTAGGGTTTATCTTTCACATGGATATTttagtaatctaggacttttgca gatgaaattgagtttttataattgttcatttgaagtaataacattgacgc gttctttagaaaaataacaaaattgattttttactggttaacgaccaacc aaatcaaattagagcttttgattgttttcatggTCGCAGCCAGCCgcctc ggctatctatgaacagACGAAATGATGGGAAGAGCAGGAACTTGAACCGG GAACCTTAGCCTGGTTACAGGAACCTCTTGTACGACCATTCACCTTATCt tgtgtttttgtttattttttagctATTATACGATTATGTTCTATCTAACG ATGCATCACCGAGTGAATTCCAACTGCGCACTAGTTTCCCAAGGAATGTA TACCCCTTAGATGAGACGAACTGTGAACGGACTTTAGAGTCAATAGGAAT AAAAACATCAACACAATTCTTAGTGGAAGATTTGACTGAAGAAAGCTCTG GTGATGAGGAGGAGGATGACGAATGAAaagagaaattattttgatgatgg TTAGAAATTTATTTAATTACCTTTTAGAGGTGGAAATTTTGTTGATGGGA ATTTAACTTCGCGGATGGCCGAGAAAGATTTTTTCTGAGGGAATTTCATT TGGCAgatggaaagaaaaataattttttcggtAATTATTTTGGTGCTCGA AGGATACTTTGGGCCAACAATCATCATTAAATAAACAAAATCTATTCCTA GGCTCTGAAATAGCATAAATATAGATCCACCAAATTTATATTTGGTcaca attttttcctttttaagaTACAAAATTTGGAAAGCAGCGATGTGTAGCTA GTGGGAAAGTTTTTATAATCATTCTTCTTTTGTTAAATGTTAAACCCAGT Taaaaagttaaggttccttttataaagaaaaaaattaaagaatttgaaag aaaataacaaaatatattAAACTAAGCGCCGGCTTAAAAAGAACCGATAA GTTTTGTGCTCTTCCAGNGACCATTCACCTTATCttgtgtttttgtttat tttttagctATTATACGATTATGTTCTATCTAACGATGCATCACCGAGTG AATTCCAACTGCGCACTAGTTTCCCAAGGAATGTTTACCCCTTAGATGAG ACGAACTGTGAACGGACTTTAGAGTCAATAGGAATAAAAACATCAACACA ATTCTTAGTGGAAGATTTGACTGAAGAAAGCTCTGGTGATGAGGAGGAGG ATGACGAATGAAaagagaaattattttgatgatggTTAGAAATTTATTTA ATTACCTTTTAGAGGTGGAAATTTTGTTGATGGGAATTTAACTTCGCGGA TGGCCGAGAAAGATTTTTTCTGAGGGAATTTCATTTGGCAgatggaaaga aaaataattttttcggtAATTATTTTGGTGCTCGAAGGATACTTTGGGCC AACAATCATCATTAAATAAACAAAATCTATTCCTAGGCTCTGAAATAGCA TAAATATAGATCCACCAAATTTATATTTGGTcacaattttttccttttta agaTACAAAATTTGGAAAGCAGCGATGTGTAGCTAgtgggaaaattttta taatcatTCTTCTTTTGTTAAATGTTAAACCCAGTTaaaaagttaaggtt ccttttataaagaaaaaaattaaagaatttgaaagaaaataacaaaatat attAAACTAAGCGCCGGCTTAAAAAGAACCGATAAGTTTTgtgctcttcc agaaaaaaattgaatattgcagTGGAGGATAtaccaattttttggaaatt tactcccccggacaacagatctcacccccggacaagcatcagttgaacat tcaaaaattcaaatttacccctaaacagagcaagtttgcaaccaaaacaa ggcaaattttgcagattttttacTACCCCCCcgaacaaaatatccaatat atcctccacccccttgtacaaagattttctggaagagccctttACAAGAA TGACTTCAAACTTTAATCTCTTCGATTTGCGGGTTTATAcgcaattatga aaaacataGCTAGAGATGTAGATTTTACaccaaatttgtttttcttatta gttttgaaaaatgtcttaCAGTTATATTGTGTagttattttattttacaa attacTCTTTAAATTTTTGACTATAAAAAGTTTAAGCTTGATAGTTGGGT ATATCCActgttttacaaaaaacaattttcatgcTGTcaatgttaaaggt tttgtttttaaataagagtgatatcgtttgcttactcatcaattttaatt tacaagcattttcgcattggattgacacggatgtggagcaagattggtca gaaagaggaaaagaaaaacgttttttgcttatatcagcataatataacaa taggaagacactgtcctgatatgaaatatgtgtctgatatgaaacgggaa cacttatgtaaaaagaaaacct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010896XLOC_010896Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019390-exon-sc0000326-1491911889:309461..309480TCONS_00019390-exon-sc0000326-1491911889:309461..309480Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1510915933:309461..309480TCONS_00019390-exon-sc0000326-1510915933:309461..309480Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1575043694:309461..309480TCONS_00019390-exon-sc0000326-1575043694:309461..309480Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1491911889:310936..311021TCONS_00019390-exon-sc0000326-1491911889:310936..311021Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1510915933:310936..311021TCONS_00019390-exon-sc0000326-1510915933:310936..311021Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1575043694:310936..311021TCONS_00019390-exon-sc0000326-1575043694:310936..311021Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1491911889:311422..311516TCONS_00019390-exon-sc0000326-1491911889:311422..311516Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1510915933:311422..311516TCONS_00019390-exon-sc0000326-1510915933:311422..311516Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1575043694:311422..311516TCONS_00019390-exon-sc0000326-1575043694:311422..311516Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1491911889:312557..312646TCONS_00019390-exon-sc0000326-1491911889:312557..312646Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1510915933:312557..312646TCONS_00019390-exon-sc0000326-1510915933:312557..312646Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1575043694:312557..312646TCONS_00019390-exon-sc0000326-1575043694:312557..312646Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1491911889:313311..313398TCONS_00019390-exon-sc0000326-1491911889:313311..313398Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1510915933:313311..313398TCONS_00019390-exon-sc0000326-1510915933:313311..313398Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1575043694:313311..313398TCONS_00019390-exon-sc0000326-1575043694:313311..313398Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1491911889:314113..314284TCONS_00019390-exon-sc0000326-1491911889:314113..314284Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1510915933:314113..314284TCONS_00019390-exon-sc0000326-1510915933:314113..314284Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1575043694:314113..314284TCONS_00019390-exon-sc0000326-1575043694:314113..314284Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1491911889:314976..315125TCONS_00019390-exon-sc0000326-1491911889:314976..315125Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1510915933:314976..315125TCONS_00019390-exon-sc0000326-1510915933:314976..315125Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1575043694:314976..315125TCONS_00019390-exon-sc0000326-1575043694:314976..315125Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1491911889:316518..317932TCONS_00019390-exon-sc0000326-1491911889:316518..317932Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1510915933:316518..317932TCONS_00019390-exon-sc0000326-1510915933:316518..317932Clytia hemisphaericaexon
TCONS_00019390-exon-sc0000326-1575043694:316518..317932TCONS_00019390-exon-sc0000326-1575043694:316518..317932Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000326supercontigsc0000326:309461..317932 +
Expression
No biomaterial libraries express this feature.
Blast
BLAST of TCONS_00019390 vs. Swiss-Prot (Human)
Match: FAF2 (FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 3.970e-41
Identity = 113/291 (38.83%), Postives = 165/291 (56.70%), Query Frame = 3
Query:    6 GSYGQVLADAKKELRFLLVYLHAPHHQSTPEFCRNVLSNENFREYTINRRLLFWGCDISTNEGHRVSRAMRETTYPFLAVVCLREGRMTVVWRIEGCLDLDRLIAVCEQVFNDNEAALVAAQAERNERNFSRSLREEQDQDFLXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXXXXXXANRRQVCRTKFESLVE-----PSQGDEGVVKLRIRLSNGENMQRFFMKSDTLQLLYDYVLSNDASPSEFQLRTSFPRNVYPL---DETNCERTLESIGIKTSTQFLV 854
            G+Y Q L DAK+ELRFLLVYLH   HQ + EFCRN L         IN R+LFW C  +  EG+RVS+A+RE TYPFLA++ L++ RMTVV R+EG +  D LI     + + N+  LV+ + ER ERN ++ LR++QD+ +L SL  D++K   K       +E    K+ KE+E  ++      RRQ  + + E  +E     PS  D   VK+  +L N   ++R F  S +L +++D++ S   SP +FQ+  +FPR V P    +E     TL+  G+  +    V
Sbjct:  157 GTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVIS-LINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLASLRADQEKERKK-------REERERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPESVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCIPSEEWPNPPTLQEAGLSHTEVLFV 439          
The following BLAST results are available for this feature:
BLAST of TCONS_00019390 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FAF23.970e-4138.83FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE... [more]
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