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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019433 ID=TCONS_00019433|Name=TCONS_00019433|organism=Clytia hemisphaerica|type=transcript|length=713bp
CTCGCATCACAACTTTCAAACCTATCGCTCGAGGAGACGTCAGTTATGAA
CTCAAATGAAGACGCTATCAAAAAACTCGCAGTACTCGTGGCATCCGTTA
ATGATACCATCGACGAAACCCCGATCAGTGGACTGTCATCCATCGCAAGG
ATCGATTCCACCATTTCAGAAATGAAGTCATTTCGCGATGATTTACGACT
TCTGGTAATAGATACCAATCTCGACAATGATCATCAACTCATTAATTCAG
CAAATCAATCAATATCATCAATCAGAGACTATATCCTGTCCGCACGTGAC
CGCCTTCAAAAGCTTCAGTTAGCTCAAACCAAAGAAGCAGCTCAAGAAGC
AACCAGGAAGGAGAGATCAATGGTGTTCACAATTGAGGATATCCAGCAAC
AGCTTATCGAAATAGAAGCTACTTTCACCCAAGACCTTGGTCATACTGAT
GACGAGACACTCACCAGACTCAAAGACCAATCAACAAAAATGACTGATCG
CCTCGAAAAGATATCAGCCAAGTACGAAAAGCTTCTTCAATCTCCAATAA
CTGACAGTGATGCACTACATGACATCAAAACTATCGGTGAACGTTACATG
AAGTTAAACGCACTCAAAACCAAATTCAATGATGGTGTCCATCAAGAATT
TATTAGGAGAGAACTCGATAAAGACCACAGTATGGCGAACATCAAAATCA
AACTCGAAAAATT Run BLAST on NCBI protein sequence of TCONS_00019433-protein >TCONS_00019433-protein ID=TCONS_00019433-protein|Name=TCONS_00019433-protein|organism=Clytia hemisphaerica|type=polypeptide|length=237bp
LASQLSNLSLEETSVMNSNEDAIKKLAVLVASVNDTIDETPISGLSSIAR
IDSTISEMKSFRDDLRLLVIDTNLDNDHQLINSANQSISSIRDYILSARD
RLQKLQLAQTKEAAQEATRKERSMVFTIEDIQQQLIEIEATFTQDLGHTD
DETLTRLKDQSTKMTDRLEKISAKYEKLLQSPITDSDALHDIKTIGERYM
KLNALKTKFNDGVHQEFIRRELDKDHSMANIKIKLEK Run BLAST on NCBI transcript from alignment at sc0000326:55318..56030 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019433 ID=TCONS_00019433|Name=TCONS_00019433|organism=Clytia hemisphaerica|type=transcript|length=713bp|location=Sequence derived from alignment at sc0000326:55318..56030 (Clytia hemisphaerica)
AATTTTTCGAGTTTGATTTTGATGTTCGCCATACTGTGGTCTTTATCGAG
TTCTCTCCTAATAAATTCTTGATGGACACCATCATTGAATTTGGTTTTGA
GTGCGTTTAACTTCATGTAACGTTCACCGATAGTTTTGATGTCATGTAGT
GCATCACTGTCAGTTATTGGAGATTGAAGAAGCTTTTCGTACTTGGCTGA
TATCTTTTCGAGGCGATCAGTCATTTTTGTTGATTGGTCTTTGAGTCTGG
TGAGTGTCTCGTCATCAGTATGACCAAGGTCTTGGGTGAAAGTAGCTTCT
ATTTCGATAAGCTGTTGCTGGATATCCTCAATTGTGAACACCATTGATCT
CTCCTTCCTGGTTGCTTCTTGAGCTGCTTCTTTGGTTTGAGCTAACTGAA
GCTTTTGAAGGCGGTCACGTGCGGACAGGATATAGTCTCTGATTGATGAT
ATTGATTGATTTGCTGAATTAATGAGTTGATGATCATTGTCGAGATTGGT
ATCTATTACCAGAAGTCGTAAATCATCGCGAAATGACTTCATTTCTGAAA
TGGTGGAATCGATCCTTGCGATGGATGACAGTCCACTGATCGGGGTTTCG
TCGATGGTATCATTAACGGATGCCACGAGTACTGCGAGTTTTTTGATAGC
GTCTTCATTTGAGTTCATAACTGACGTCTCCTCGAGCGATAGGTTTGAAA
GTTGTGATGCGAG Coding sequence (CDS) from alignment at sc0000326:55318..56030 >TCONS_00019433 ID=TCONS_00019433|Name=TCONS_00019433|organism=Clytia hemisphaerica|type=CDS|length=711bp|location=Sequence derived from alignment at sc0000326:55318..56030 (Clytia hemisphaerica)
TTTTTCGAGTTTGATTTTGATGTTCGCCATACTGTGGTCTTTATCGAGTT
CTCTCCTAATAAATTCTTGATGGACACCATCATTGAATTTGGTTTTGAGT
GCGTTTAACTTCATGTAACGTTCACCGATAGTTTTGATGTCATGTAGTGC
ATCACTGTCAGTTATTGGAGATTGAAGAAGCTTTTCGTACTTGGCTGATA
TCTTTTCGAGGCGATCAGTCATTTTTGTTGATTGGTCTTTGAGTCTGGTG
AGTGTCTCGTCATCAGTATGACCAAGGTCTTGGGTGAAAGTAGCTTCTAT
TTCGATAAGCTGTTGCTGGATATCCTCAATTGTGAACACCATTGATCTCT
CCTTCCTGGTTGCTTCTTGAGCTGCTTCTTTGGTTTGAGCTAACTGAAGC
TTTTGAAGGCGGTCACGTGCGGACAGGATATAGTCTCTGATTGATGATAT
TGATTGATTTGCTGAATTAATGAGTTGATGATCATTGTCGAGATTGGTAT
CTATTACCAGAAGTCGTAAATCATCGCGAAATGACTTCATTTCTGAAATG
GTGGAATCGATCCTTGCGATGGATGACAGTCCACTGATCGGGGTTTCGTC
GATGGTATCATTAACGGATGCCACGAGTACTGCGAGTTTTTTGATAGCGT
CTTCATTTGAGTTCATAACTGACGTCTCCTCGAGCGATAGGTTTGAAAGT
TGTGATGCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019433-exon-sc0000326-1491911889:55318..56030 | TCONS_00019433-exon-sc0000326-1491911889:55318..56030 | Clytia hemisphaerica | exon |
| TCONS_00019433-exon-sc0000326-1510915933:55318..56030 | TCONS_00019433-exon-sc0000326-1510915933:55318..56030 | Clytia hemisphaerica | exon |
| TCONS_00019433-exon-sc0000326-1575043694:55318..56030 | TCONS_00019433-exon-sc0000326-1575043694:55318..56030 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000326 | supercontig | sc0000326:55318..56030 . |
Blast
The following BLAST results are available for this feature:
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