TCONS_00019434 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019434
Unique NameTCONS_00019434
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length178

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019434 ID=TCONS_00019434|Name=TCONS_00019434|organism=Clytia hemisphaerica|type=transcript|length=178bp
gtaaaaatattaattttcattgtatgtgaatttcaaggttttgtagagat
gaactttcattttcaaggtatTTGAGAGGATTAGATGTGAAGGAAGTCTC
TAACCTTCTTTTTGATCGTATATTCAGATAATGGTCTAAGATCAGTCTTT
GTATGTAATAATAGTTGGTTCCAATTTA
Run BLAST on NCBI

transcript from alignment at sc0000326:59078..59255

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019434 ID=TCONS_00019434|Name=TCONS_00019434|organism=Clytia hemisphaerica|type=transcript|length=178bp|location=Sequence derived from alignment at sc0000326:59078..59255 (Clytia hemisphaerica)
TAAATTGGAACCAACTATTATTACATACAAAGACTGATCTTAGACCATTA
TCTGAATATACGATCAAAAAGAAGGTTAGAGACTTCCTTCACATCTAATC
CTCTCAAataccttgaaaatgaaagttcatctctacaaaaccttgaaatt
cacatacaatgaaaattaatatttttac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010921XLOC_010921Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019434-exon-sc0000326-1491911889:59078..59255TCONS_00019434-exon-sc0000326-1491911889:59078..59255Clytia hemisphaericaexon
TCONS_00019434-exon-sc0000326-1510915933:59078..59255TCONS_00019434-exon-sc0000326-1510915933:59078..59255Clytia hemisphaericaexon
TCONS_00019434-exon-sc0000326-1575043694:59078..59255TCONS_00019434-exon-sc0000326-1575043694:59078..59255Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000326supercontigsc0000326:59078..59255 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019434 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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