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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019437 ID=TCONS_00019437|Name=TCONS_00019437|organism=Clytia hemisphaerica|type=transcript|length=1861bp
ACCATCAATATCAAGAGATTATGAAACCAACTCTACTGATCCAATAGTAA
AGAGGAACAGTAATTCTAGCTTTAGCCAATCAAAACTAGACAAGCATTCC
ATAGAAACGGACAACCAACCGTTGTATTGTACATCGGAATGTAGCGACAA
TCGAATGTTCACCTTTATGATCATATTAAGTATTTGTATGGGGCTTTTCG
AATTCTCGTTACCCGGTTTTATAGACGTAAATGTTATGACAGTAACTTCG
AAACATCCGAAAACCAGTTTCGGATTTCAGCGGGTTTTCGGCTCCGCTGG
GTATGCATTTGGTAGTGTTCTTGCAGGCTTTGTTGCAGATCGTTTTCAAC
ATCAAACATTGACTACATTTTCAGCACCTATTTTTGTATCTGTACCGTTT
TTGGTTGCTGGTTTACCGTTTTATGTTATGCTTGCGTTGATGGCCAAGAA
AGTTACCAGCGAGACAAAAGATGATCCAGAAGACTCTGAAGAAGAggata
aatcaactgaaaaatGCAAAGCAGTTTCTGGAATGTGTAAAGCAATGGAA
TCAACACCATCTGTGGACAATAAAGGTTATCAGAAAGAAGACAGTTTTGA
TACCAAATTTGTAAACGAATTATATATCCAGAAAGAAATATTTGGCCAAT
CCAAAAAATCTTCCGAAACAAAAGGATATTCAGAACTAAACTTAAAGGAC
AATGCAGATTTCCCAAATAAAAAACCCTTATCAAAAAGTAAACTAGATAA
CGAGTTCAATGAATCTTGCAATAGTAGTCATAATAATGGTGCGgacaaaa
aaaacgaaaatgatgAAGGTAGTAACAGTACagatcttaaaatttcaaat
ctgtCGAGTTCGAATTCAAATAAGGATAGCACTGAAGACGATGAGAGATC
CACAAGTAAATTAGCCAAGGATTTACATGAATCTGTGAAAATAACGgaca
aaaatgatgaaaattgtgACAATGCAGATCTTAAACACTCAAATCAGTCG
AATaagaaatatataaataacACTGACGATGACAGCTCCACAAGTAATTT
GACGGGTATCGAACTCTTGAAATTAACCACCAAAACATGTCTTCAGCCAT
CCATCTTCGTGCTCTTGCTCACAACTCTAATCAATGGAATCGCACTAAGT
TTTATGAACAGTTTTATGTTCCTACACATGAAAGATGCAATGGGATCTCC
TGATACAGTCCTCGGTTTCAACATCACTTCAATGATTGCCGGAGAAATCA
TATTCTTCCTAATTACCAAAACAATAATCAATAAATTTGGAAGTTTCAAA
TGTTTAGTTGTTTCCTTATTTGGTAATGGTGTTCGATTTATACTAATGGC
GTTCTGTAAAAACCCTTGGTTAACATTGCCCATACAACTGCTTCATGGAG
TCGGGTATGCCTTGTTTTTCGCTTCAACTATAGAAATAGCTTACGAATTC
TCACCACAAGTGATTCGAACGACTATCTTTAGTATAATTGGTAGTCTTTT
CTTTTCTGTGGCAAATGTCATTGGGAATCTACTTGGTGGTTGGATTTATG
AGACTTACAAAGGACTCATCTTGTTTCTCGTGACTGGAATTTTGTGTAGT
GCTTGGAGTATAGTGATTGGGTTTTATTATTTGATGCCAAAGCCGAATAG
AAAATGACACTTTTTAGCAACATTTTCTACAGAATAAtattataaaaaga
atataAGCCGTTGTTCCTGGTGAAGTAGAATTTTGTGTAGTGCTTTGAGT
GCAGTGACGGGATTTACTGATTTAAATTGGTAACAAAgccaaataaaaaa
tgagactTTTTTAGCAACATTTTTTACAAAGAAATACTCACttattttat
ataagaacacg Run BLAST on NCBI protein sequence of TCONS_00019437-protein >TCONS_00019437-protein ID=TCONS_00019437-protein|Name=TCONS_00019437-protein|organism=Clytia hemisphaerica|type=polypeptide|length=551bp
PSISRDYETNSTDPIVKRNSNSSFSQSKLDKHSIETDNQPLYCTSECSDN
RMFTFMIILSICMGLFEFSLPGFIDVNVMTVTSKHPKTSFGFQRVFGSAG
YAFGSVLAGFVADRFQHQTLTTFSAPIFVSVPFLVAGLPFYVMLALMAKK
VTSETKDDPEDSEEEDKSTEKCKAVSGMCKAMESTPSVDNKGYQKEDSFD
TKFVNELYIQKEIFGQSKKSSETKGYSELNLKDNADFPNKKPLSKSKLDN
EFNESCNSSHNNGADKKNENDEGSNSTDLKISNLSSSNSNKDSTEDDERS
TSKLAKDLHESVKITDKNDENCDNADLKHSNQSNKKYINNTDDDSSTSNL
TGIELLKLTTKTCLQPSIFVLLLTTLINGIALSFMNSFMFLHMKDAMGSP
DTVLGFNITSMIAGEIIFFLITKTIINKFGSFKCLVVSLFGNGVRFILMA
FCKNPWLTLPIQLLHGVGYALFFASTIEIAYEFSPQVIRTTIFSIIGSLF
FSVANVIGNLLGGWIYETYKGLILFLVTGILCSAWSIVIGFYYLMPKPNR
K Run BLAST on NCBI transcript from alignment at sc0000326:128633..130493 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019437 ID=TCONS_00019437|Name=TCONS_00019437|organism=Clytia hemisphaerica|type=transcript|length=1861bp|location=Sequence derived from alignment at sc0000326:128633..130493 (Clytia hemisphaerica)
cgtgttcttatataaaataaGTGAGTATTTCTTTGTAAAAAATGTTGCTA
AAAAagtctcattttttatttggcTTTGTTACCAATTTAAATCAGTAAAT
CCCGTCACTGCACTCAAAGCACTACACAAAATTCTACTTCACCAGGAACA
ACGGCTtatattctttttataataTTATTCTGTAGAAAATGTTGCTAAAA
AGTGTCATTTTCTATTCGGCTTTGGCATCAAATAATAAAACCCAATCACT
ATACTCCAAGCACTACACAAAATTCCAGTCACGAGAAACAAGATGAGTCC
TTTGTAAGTCTCATAAATCCAACCACCAAGTAGATTCCCAATGACATTTG
CCACAGAAAAGAAAAGACTACCAATTATACTAAAGATAGTCGTTCGAATC
ACTTGTGGTGAGAATTCGTAAGCTATTTCTATAGTTGAAGCGAAAAACAA
GGCATACCCGACTCCATGAAGCAGTTGTATGGGCAATGTTAACCAAGGGT
TTTTACAGAACGCCATTAGTATAAATCGAACACCATTACCAAATAAGGAA
ACAACTAAACATTTGAAACTTCCAAATTTATTGATTATTGTTTTGGTAAT
TAGGAAGAATATGATTTCTCCGGCAATCATTGAAGTGATGTTGAAACCGA
GGACTGTATCAGGAGATCCCATTGCATCTTTCATGTGTAGGAACATAAAA
CTGTTCATAAAACTTAGTGCGATTCCATTGATTAGAGTTGTGAGCAAGAG
CACGAAGATGGATGGCTGAAGACATGTTTTGGTGGTTAATTTCAAGAGTT
CGATACCCGTCAAATTACTTGTGGAGCTGTCATCGTCAGTgttatttata
tatttcttATTCGACTGATTTGAGTGTTTAAGATCTGCATTGTcacaatt
ttcatcatttttgtcCGTTATTTTCACAGATTCATGTAAATCCTTGGCTA
ATTTACTTGTGGATCTCTCATCGTCTTCAGTGCTATCCTTATTTGAATTC
GAACTCGacagatttgaaattttaagatctGTACTGTTACTACCTTcatc
attttcgttttttttgtcCGCACCATTATTATGACTACTATTGCAAGATT
CATTGAACTCGTTATCTAGTTTACTTTTTGATAAGGGTTTTTTATTTGGG
AAATCTGCATTGTCCTTTAAGTTTAGTTCTGAATATCCTTTTGTTTCGGA
AGATTTTTTGGATTGGCCAAATATTTCTTTCTGGATATATAATTCGTTTA
CAAATTTGGTATCAAAACTGTCTTCTTTCTGATAACCTTTATTGTCCACA
GATGGTGTTGATTCCATTGCTTTACACATTCCAGAAACTGCTTTGCattt
ttcagttgatttatccTCTTCTTCAGAGTCTTCTGGATCATCTTTTGTCT
CGCTGGTAACTTTCTTGGCCATCAACGCAAGCATAACATAAAACGGTAAA
CCAGCAACCAAAAACGGTACAGATACAAAAATAGGTGCTGAAAATGTAGT
CAATGTTTGATGTTGAAAACGATCTGCAACAAAGCCTGCAAGAACACTAC
CAAATGCATACCCAGCGGAGCCGAAAACCCGCTGAAATCCGAAACTGGTT
TTCGGATGTTTCGAAGTTACTGTCATAACATTTACGTCTATAAAACCGGG
TAACGAGAATTCGAAAAGCCCCATACAAATACTTAATATGATCATAAAGG
TGAACATTCGATTGTCGCTACATTCCGATGTACAATACAACGGTTGGTTG
TCCGTTTCTATGGAATGCTTGTCTAGTTTTGATTGGCTAAAGCTAGAATT
ACTGTTCCTCTTTACTATTGGATCAGTAGAGTTGGTTTCATAATCTCTTG
ATATTGATGGT Coding sequence (CDS) from alignment at sc0000326:128633..130493 >TCONS_00019437 ID=TCONS_00019437|Name=TCONS_00019437|organism=Clytia hemisphaerica|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0000326:128633..130493 (Clytia hemisphaerica)
TCATTTTCTATTCGGCTTTGGCATCAAATAATAAAACCCAATCACTATAC
TCCAAGCACTACACAAAATTCCAGTCACGAGAAACAAGATGAGTCCTTTG
TAAGTCTCATAAATCCAACCACCAAGTAGATTCCCAATGACATTTGCCAC
AGAAAAGAAAAGACTACCAATTATACTAAAGATAGTCGTTCGAATCACTT
GTGGTGAGAATTCGTAAGCTATTTCTATAGTTGAAGCGAAAAACAAGGCA
TACCCGACTCCATGAAGCAGTTGTATGGGCAATGTTAACCAAGGGTTTTT
ACAGAACGCCATTAGTATAAATCGAACACCATTACCAAATAAGGAAACAA
CTAAACATTTGAAACTTCCAAATTTATTGATTATTGTTTTGGTAATTAGG
AAGAATATGATTTCTCCGGCAATCATTGAAGTGATGTTGAAACCGAGGAC
TGTATCAGGAGATCCCATTGCATCTTTCATGTGTAGGAACATAAAACTGT
TCATAAAACTTAGTGCGATTCCATTGATTAGAGTTGTGAGCAAGAGCACG
AAGATGGATGGCTGAAGACATGTTTTGGTGGTTAATTTCAAGAGTTCGAT
ACCCGTCAAATTACTTGTGGAGCTGTCATCGTCAGTgttatttatatatt
tcttATTCGACTGATTTGAGTGTTTAAGATCTGCATTGTcacaattttca
tcatttttgtcCGTTATTTTCACAGATTCATGTAAATCCTTGGCTAATTT
ACTTGTGGATCTCTCATCGTCTTCAGTGCTATCCTTATTTGAATTCGAAC
TCGacagatttgaaattttaagatctGTACTGTTACTACCTTcatcattt
tcgttttttttgtcCGCACCATTATTATGACTACTATTGCAAGATTCATT
GAACTCGTTATCTAGTTTACTTTTTGATAAGGGTTTTTTATTTGGGAAAT
CTGCATTGTCCTTTAAGTTTAGTTCTGAATATCCTTTTGTTTCGGAAGAT
TTTTTGGATTGGCCAAATATTTCTTTCTGGATATATAATTCGTTTACAAA
TTTGGTATCAAAACTGTCTTCTTTCTGATAACCTTTATTGTCCACAGATG
GTGTTGATTCCATTGCTTTACACATTCCAGAAACTGCTTTGCatttttca
gttgatttatccTCTTCTTCAGAGTCTTCTGGATCATCTTTTGTCTCGCT
GGTAACTTTCTTGGCCATCAACGCAAGCATAACATAAAACGGTAAACCAG
CAACCAAAAACGGTACAGATACAAAAATAGGTGCTGAAAATGTAGTCAAT
GTTTGATGTTGAAAACGATCTGCAACAAAGCCTGCAAGAACACTACCAAA
TGCATACCCAGCGGAGCCGAAAACCCGCTGAAATCCGAAACTGGTTTTCG
GATGTTTCGAAGTTACTGTCATAACATTTACGTCTATAAAACCGGGTAAC
GAGAATTCGAAAAGCCCCATACAAATACTTAATATGATCATAAAGGTGAA
CATTCGATTGTCGCTACATTCCGATGTACAATACAACGGTTGGTTGTCCG
TTTCTATGGAATGCTTGTCTAGTTTTGATTGGCTAAAGCTAGAATTACTG
TTCCTCTTTACTATTGGATCAGTAGAGTTGGTTTCATAATCTCTTGATAT
TGATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019437-exon-sc0000326-1491911889:128633..130493 | TCONS_00019437-exon-sc0000326-1491911889:128633..130493 | Clytia hemisphaerica | exon |
| TCONS_00019437-exon-sc0000326-1510915933:128633..130493 | TCONS_00019437-exon-sc0000326-1510915933:128633..130493 | Clytia hemisphaerica | exon |
| TCONS_00019437-exon-sc0000326-1575043694:128633..130493 | TCONS_00019437-exon-sc0000326-1575043694:128633..130493 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000326 | supercontig | sc0000326:128633..130493 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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