TCONS_00019459 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019459
Unique NameTCONS_00019459
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length833

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019459 ID=TCONS_00019459|Name=TCONS_00019459|organism=Clytia hemisphaerica|type=transcript|length=833bp
ggatgatgatgaaattttcaattttgatatgcAGtattttgctgGGCTCA
GTAGAAAGTCAAGAGCTCAAATTCAAGAAAGACAAGTCATGCTCCACCAA
GATGGCGTCCAAGCTGCGAAGACACAGTATTTTAATCGCAAGCAAGATCT
CAGCCAACCAAGCAAATATCGCTACTTGGCGAGATTGTTTTACCAGCTGT
TCGAATCACGCAAATTGTGCAATGTTTGCACATCACGAAAAAGAGAAACG
CTGTATGTTTTTCAAAGAGATTTTGGTCAATGAAGTGCTTTCAAGACTCA
TTTTTGAGGGATGGAGTCCTGGCAGAATAAACGCCCAAGAAAAAATCATT
TCATACATTTCGGATACCTGTTCTGAGGAGTATTGCCGAGATTCATGTCT
ATCTGGAGTAAGAGAGACTTGCACCCCGTCTTTATACAGACTACCTGAAT
GTACAGCATATGATGGCGTTTTTACTGGCTGCGATCATGCAAGGAAAATA
CTTCAGCAAAATCCATCCATGGGTTTATCATTATCCTCAGCCTCGTTCGA
CCAAACCATCAGGATAAGCATTGGAGGAGGTTCGGTTTATGTCCCCTGTC
AAGAACACGTTGAATATACTCAGATCGTAGCCGGAGATGGTAAATGCATG
GCCGATGATAAAGATAGTTGGTACGGCTTCTATCGACGTGATTGTTATGA
CGGTTATGCCACAACCTACGCTTACAATCGTATAACGCATGTGTTGAAAC
CATTATATCGTTCCTGGCAATTCTTTAAGTAAGCTTTATCATTCCATGCC
TTGTATGAAATGTTTTGAAACCATCATTTTCTT
Run BLAST on NCBI

protein sequence of TCONS_00019459-protein

>TCONS_00019459-protein ID=TCONS_00019459-protein|Name=TCONS_00019459-protein|organism=Clytia hemisphaerica|type=polypeptide|length=259bp
MMMKFSILICSILLGSVESQELKFKKDKSCSTKMASKLRRHSILIASKIS
ANQANIATWRDCFTSCSNHANCAMFAHHEKEKRCMFFKEILVNEVLSRLI
FEGWSPGRINAQEKIISYISDTCSEEYCRDSCLSGVRETCTPSLYRLPEC
TAYDGVFTGCDHARKILQQNPSMGLSLSSASFDQTIRISIGGGSVYVPCQ
EHVEYTQIVAGDGKCMADDKDSWYGFYRRDCYDGYATTYAYNRITHVLKP
LYRSWQFFK
Run BLAST on NCBI

transcript from alignment at sc0000328:152093..160939+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019459 ID=TCONS_00019459|Name=TCONS_00019459|organism=Clytia hemisphaerica|type=transcript|length=8847bp|location=Sequence derived from alignment at sc0000328:152093..160939+ (Clytia hemisphaerica)
ggatgatgatgaaattttcaattttgatatgcAGGTAgatatttgatttg
tttttttactGTTCACTACTTGTACTGACTGAACGCCAATTCAACATTTA
TCAAACGTAAGagatacaaaaacaacaaaaagtttaaaacgtTTTTCTAA
AGGTCGGGATTTCCCCCTTTTTTGGGTCCTTTCAAGGGTATGCAAACCCT
GAAAAGTAAAAATATCGTCTCTCCAAGGGTCCTTTAGCGTAAAAATTTGG
TCACTCATATGGTCGTTTTTCGGAGGccggcccgcacatacccgatattc
tccaaccctagtaccccctttGGGCTTTGAAGTATTCCGATGGATGTAGT
CAGATAGGATTGTTTCACAAACCATCAAAACCGAGACAATTATATATGCT
ATAGAAATGACATTTGGCGCAGAGGTCTAGGAATCATCAGTAAAAAAATG
CATAACCCTTAGAAAAACACAGGAAATACCTTGAGATCAAGTTTTTCTTC
TCCAAGGGTCCCCTTTAGtagcttttttaaagaaaaatgaaaaaatagtt
gGAAAAAAAGTACTATATCCGCAATGAATCATGTGCAGTTTACGGTGCCC
ATGGTCAAATTGTGGACCAGTGGGTTTCACTAGTCCAGTTGTAATCAATA
TCTGTAATTTTTGAGGGACTTCTAATTCTGAACACCGGAATATCACTGGT
CCAGTATTTACCCAATTTACGATTTCACTGGTACACGATCCACCCAAAAC
CCTCAATGGTCCAGCGTTTGCCCTAATATCCATATCCACTGGTCCACAAT
TTGACCATGGGCACCGTAAACTGCACATGATCCTCCGCAATCATGTGTAT
AATGGATTTCAGGGTGTGACCGCCTTCCTGGGTGATTTTTTCTCGTGATA
CAAAATATCTTTCTGAACCTGGCTGGACCTCTGTGCTAAATTTCATCATC
TCTTTACCATTTTTGGActtacctcggaggtcctttaatttaacCTTTGC
CCGTCCGTTcgtaccagcttttctcgagattggctcattagtttttctga
tttttggcacaaagatgcaaaatggcaatgtccaaaatgtgacggagcct
gattttcgaaaaaaaaaaatttccggccgaaaatacaagaaatgtgccgg
aaaaactgttttttgacattttctcgagactttatcattagttttttctg
attttttgctcaaggATGCGTATTAGTAATGCCCAAAACAAGATCGAgtc
agatttttgagaaaatttttttcccgccgaaaatgccggaaatatgccgg
aaatcgccgtttttctggattttcattgtactttttccttataattggtt
gttttttcattcaaaaacattattaatagcagaACAGCCCAACATCacgc
atgtttcaattttcaataaaattgatttttgaagccggaactatttaaaa
atcgccggaacaacctactTTCGCCAAATTTCTCGAGCtgcactttatat
ttttttatgaaattttgcacactgatgcaaaatgacaatacatAAAAtct
gacggagcccgattttcaaaaaaacaaaattttcgaccgaaaatgccgga
aatatgccggaagaactgttttttggcattttctcgagattttatcatta
gttttttttctgattctttgctcaaagatgcggcGTTGACAATGCCCATA
ACATGGGTGAGtcagatttttaagaaaaaattttttccggctgaaaatac
tagaaatatgccggaaatcgtcatttttgcagattttcattggacttttt
cctcatcttttttttttttttcatcatcaagcccatcaagcatgattcaa
ttgtcaataaaacagattttttccctactccccttccctctcccccaatc
aacaatcaatgataaaatttgatgcgTTATGCAATTTCGCTAAAaactat
attttctgactgatggttttcatttttctccttattgctatctaattttc
atcatcaggtaggtccattcagcatttCTCTGGGTAGTTATGTAATTCGC
TACCTTATACCCTTAAGGGaaataattttggcgggaacttattttggcgg
atttggcgaatttagacgaaattacttcccgccaaaattaaatattttgc
tcactagccaaaataattttttttgttttattgccAAAATgaaccctgaa
attcatcaaaggtgctcaaaataaggcaaaatagaacaaatttacgctgt
cattcgccaaaattagttcccgccaaaatttaaaaatttcgccattcgcc
aaaataagttcccgccaaaattaatttcttttagaatttttgcttcccgc
caaaattagttcccgccaaaataagttcccttaaggtaatttgTTATAAC
TTTaagcttaaagggacataaaattagtaaaattagcaaatttgttttga
ttttgtatcccgctgcatacggtttgtttacaaattttgtcaATACTTTT
ACGTCCTTTTAAGTCTCGTTGTTTTTAATCATAATTTTTCAGCCTCGTTT
CTAAAGGTAGTTTATAAGGAATTTTCAGCAAATCTCTTATCTATAAACGA
CCtaataaaaaatgcattttgaCATATTGTATTGGTattatttttagtat
tttgctgGGCTCAGTAGAAAGTCAAGAGCTCAAATTCAAGAAAGACAAGT
CATGCTCCACCAAGATGGCGTCCAAGCTGCGAAGACACAGTATTTTAATC
GCAAGCAAGATCTCAGCCAACCAAGCAAATATCGCTACTTGGCGAGATTG
TTTTACCAGCTGTTCGAATCACGCAAATTGTGCAATGTTTGCACATCACG
AAAAAGAGAAACGCTGTATGTTTTTCAAAGAGATTTTGGTCAATGAAGTG
CTTTCAAGACTCATTTTTGAGGGATGGAGTCCTGGCAGAATAAACGCCCA
AGAAAAAGTATGTTtctgaaaaattcgaaattccTATATCCAGAAGACAA
ATTATATTGACCCCTTGACGAGCTGTCAAACGTGCTAACCGccctggctc
aacttcagtatctttaaTGTCACTTGCTGGCCAAATTGTAaagttgatga
aaaaaaaaagaatttaagcCAAAtgggaccatttttgaagtcttcattTT
GTCCGaaagtttttagcctcgtttcggGGCTAAAACTAGTGGCAACACcc
ttaaaagtcaaaattttgaaaaaatgaaatagtGACTCACATGGATTAGG
CCAAGCATCAAGTGTGCAAACTTTAAgtcaaatcggaccatttttgaagt
ctccagtctgtcccaaagtttttagcctcgtttttgtgctaaaactcgtg
accacgcccttattaaatgaaaattttgaaaaaattaaaaaatcatccCC
AGGGATTCGCTAAAgaatcaagtgtgcaaaatttaaaacaaagtCAATAT
CTCGAACACAAATTTacgtaaataaaaaataaacaagtgatacttttatg
gacctacctggttatgcatttaacaaatataattgatatctacgtgagca
tgaccgttaaacaatcattcagaacagaaatagtgacgatctattaaaat
tagtcgtttgtttcttatgaaaaaaacgtttaaaaaccaaaatttcatgc
tcttgaaataatctttcatattcaagacttcgtgagcaaaaaaaaaacat
ctttctcattaaaaaattgagtaatttggctaagaacattgatgtatgct
tatcaatagtgattcttataaataaagatgcgtttttttagctgaaaagt
tcttattttacaaaaatctgctcgagccatcttttacctactttcatgta
aaaaatcagaaaaaaacaatgatccaatgtttcacaaagtccaaaaaacc
ctttttttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAtc
ttggccaccaccattttgcacctttgtaccaaaaatcaaaagattcctat
gattcaatcctgagaaaagttggtaacagacgaacgaacgaacggacgaa
cggacgaacaaacacaggttaatttataggacctccaccggggtaggtcc
aataaaaattaaatcaaatctTGAACACAGTTTTTCGTATTAAACCCCTC
GGCTAAAAGTTCGATCATTCACACGGGGTCTACGACAGACCGACTCGACA
AACTGTACACTGAAAGTAAAAATAATGGGAATGAGTAGAGATTTGAACCG
GGAACCCTTATGGTGCTGACCCTTGATTCTTTTGAGTTGTGACACCTACG
CTACCACGCGCCTCCTTCCTCCATTATAAACTCGGAGTTCAAATAATAAA
GAAGAGTCTCTTTAAGTCAACCTTCTAGAACTCCTTAATTGGAACAATTT
TTCTCGTCCCTCCAGTTAACATCACCAAACCTAAAACTCCGCAAAtcgaa
atgttcttaactcgaacaaatttgcatCCACCTTTGccggttcgagttat
ggagactgtGAGGTCTTTGATGACTTTGATAATATATGAATAAATTTGGA
GATGAATTTCTCCCAATTCACTGTCTCTGTTCAGTCAGTAGACAATAATT
CACTTCCAGCTCTAGTGAATCGCAATTGAGTCCTCAGGTTCcacatggac
ccgtagctcaatggtagagcaaatgcccACGGACGGCATGGTTGTAAGTT
TgagtctcgccggatccgttggttttccaacggttctggtggcttgTTAG
AAGACAACACGAGAGCAACTATACtcacttcattgtaatacataaggGCG
AAATTCATGATATAAATAAAATGCTTTTCTCTTATTCAGATCATTTCATA
CATTTCGGATACCTGTTCTGAGGAGTATTGCCGAGATTCATGTCTATCTG
GAGTAAGAGAGACTTGCACCCCGTCTTTATACAGACTACCTGAATGTACA
GCATATGATGGTAAgagcttttcattttttctttcgaTAGCTtcggaaaa
tggacaaaaagaagaatataacataagaacatgttaagaacatttttagg
cttaaaactcaaaaagttaagaacatccgaccGAAAggattaaaaaattt
tggatgttcttatagataaaacgTGTACGTTTAGCCTTTCGAAGGCagat
agactggagtcgtttataatttATGGTGTATTGGTTGACAATATTAATAC
AATGATTAGACAACTGCGTCAACCTGAACTTGTATCATCTTTTATAAAGg
agaatttttaaaatgataccttaagggaagaaattttggtgagaagaaat
tttcgcggaagataTTTTTCGCGAATTAAGGTCTCGAAAATTTCGTATTT
CGCGGAAGAAGTTTTCACGAATTAATGGCATAAGACTTAATTCGCGGAAA
AAATTACGCGAAAAAGGggcaaattcgccaaaatatctttggcgaaaatt
tcttctcttaaggtaaccATTTCCTTCTTATATATAGGCGTTTTTACTGG
CTGCGATCATGCAAGGAAAATACTTCAGCAAAATCCATCCATGGGTTTAT
CATTATCCTCAGCCTCGTTCGACCAAACCATCAGGATAAGCATTGGAGGA
GGTTCGGTTTATGTCCCCTGTCAAGAACACGTTGGTAAGATAACCAAACG
CTATAAGGGAATGGttagaaagtatctactagggtggGGCTGGAGGATAC
TTTCGAAATATATTCCAAAACAAATTCGCACCCCTCCCTTGATATcctca
aaaaaatattcaagcccTTTTCCCTAACCAGTCATTATATTTTCGACACC
CCCTCTTAATATAGAAGCCCGAGTAAAGACATAAATTTCTTTTGAGACCC
TCCTCTAAGGGTGGTAACAATTtgaaagccccccccccccNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccctagt
agatatTTTCTGACCACTCTCCCTAATTGGAATCTTCAGTAATTCAAACT
GAGACTATGGAGCCCTCAATCGTAAAGTAATGTTACCACtgtactctctg
taattcgaatatttcccTAATTCAGAGAATGTTCTTTTTGGTTCTTTAaa
gatcgaataagagagagtaaattattttttcgaagcCACTTGTTCATAAG
GTTGCTTAGTATTCTAGGTCCATTTCAGAGAAATTTGCGAATAGCCTCTA
TCCCCAACActactcttctgtgcttaattgtagggggtcactttgcaatt
ttcgccACAATTGCATTTTATAATGACCCACCAACGATATTATGAAATTT
TAtgacctttttataaaaaagtgccaaaaccttcattatTAAAAATACCC
CAGAAACACTTAATATTGACCCCCATTTTATGAGTTTTCTCCCCCttgga
ccccttcccactgaaaaaattggccaaaatatcatccccagtgactccag
tggaaaattatacctcaaattttgaaaaaatagctgAATAAGTCAatcat
cactgcaaaaaaatatgctatttttcccatccccactgaatctttttgaa
aacaatggaattcaaatcccaagCCATAAAAAAATTGGGAATATTTGTCC
CATCGAGTTtcggtccgttatttttacccccccccccctccNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNccccccccccctgcttgaaaaaatcctaccggg
tctgtgagaagggggtgttaaaagGAGCTTCATCTATTGACTATACAAAT
ATTTGATAATCCCGGATTTTTAAATCATGGATTTTTGAATCACTAAAAAC
CgcaaattttgttttattgCATTTAGAATATACTCAGATCGTAGCCGGAG
ATGGTAAATGCATGGCCGATGATAAAGATAGTTGGTACGGCTTCTATCGA
CGTGATTGTTATGACGGTTATGCCACAACCTACGCTTACAATCGTATAAC
GCATGTGTTGAAACCATTATATCGTTCCTGGCAATTCTTTAAGTAAGCTT
TATCATTCCATGCCTTGTATGAAATGTTTTGAAACCATCATTTTCTT

Coding sequence (CDS) from alignment at sc0000328:152093..160939+

>TCONS_00019459 ID=TCONS_00019459|Name=TCONS_00019459|organism=Clytia hemisphaerica|type=CDS|length=3900bp|location=Sequence derived from alignment at sc0000328:152093..160939+ (Clytia hemisphaerica)
atgatgatgaaattttcaattttgatatgcAGtattttgctgGGCTCAGT
AGAAAGTCAAGAGCTCAAATTCAAGAAAGACAAGTCATGCTCCACCAAGA
TGGCGTCCAAGCTGCGAAGACACAGTATTTTAATCGCAAGCAAGATCTCA
GCCAACCAAGCAAATATCGCTACTTGGCGAGATTGTTTTACCAGCTGTTC
GAATCACGCAAATTGTGCAATGTTTGCACATCACGAAAAAGAGAAACGCT
GTATGTTTTTCAAAGAGATTTTGGTCAATGAAGTGCTTTCAAGACTCATT
TTTGAGGGATGGAGTCCTGGCAGAATAAACGCCCAAGAAAAAATCATTTC
ATACATTTCGGATACCTGTTCTGAGGAGTATTGCCGAGATTCATGTCTAT
CTGGAGTAAGAGAGACTTGCACCCCGTCTTTATACAGACTACCTGAATGT
ACAGCATATGATGGCGTTTTTACTGGCTGCGATCATGCAAGGAAAATACT
TCAGCAAAATCCATCCATGGGTTTATCATTATCCTCAGCCTCGTTCGACC
AAACCATCAGGATAAGCATTGGAGGAGGTTCGGTTTATGTCCCCTGTCAA
GAACACGTTGAATATACTCAGATCGTAGCCGGAGATGGTAAATGCATGGC
CGATGATAAAGATAGTTGGTACGGCTTCTATCGACGTGATTGTTATGACG
GTTATGCCACAACCTACGCTTACAATCGTATAACGCATGTGTTGAAACCA
TTATATCGTTCCTGGCAATTCTTTAAGTAAatgatgatgaaattttcaat
tttgatatgcAGtattttgctgGGCTCAGTAGAAAGTCAAGAGCTCAAAT
TCAAGAAAGACAAGTCATGCTCCACCAAGATGGCGTCCAAGCTGCGAAGA
CACAGTATTTTAATCGCAAGCAAGATCTCAGCCAACCAAGCAAATATCGC
TACTTGGCGAGATTGTTTTACCAGCTGTTCGAATCACGCAAATTGTGCAA
TGTTTGCACATCACGAAAAAGAGAAACGCTGTATGTTTTTCAAAGAGATT
TTGGTCAATGAAGTGCTTTCAAGACTCATTTTTGAGGGATGGAGTCCTGG
CAGAATAAACGCCCAAGAAAAAATCATTTCATACATTTCGGATACCTGTT
CTGAGGAGTATTGCCGAGATTCATGTCTATCTGGAGTAAGAGAGACTTGC
ACCCCGTCTTTATACAGACTACCTGAATGTACAGCATATGATGGCGTTTT
TACTGGCTGCGATCATGCAAGGAAAATACTTCAGCAAAATCCATCCATGG
GTTTATCATTATCCTCAGCCTCGTTCGACCAAACCATCAGGATAAGCATT
GGAGGAGGTTCGGTTTATGTCCCCTGTCAAGAACACGTTGAATATACTCA
GATCGTAGCCGGAGATGGTAAATGCATGGCCGATGATAAAGATAGTTGGT
ACGGCTTCTATCGACGTGATTGTTATGACGGTTATGCCACAACCTACGCT
TACAATCGTATAACGCATGTGTTGAAACCATTATATCGTTCCTGGCAATT
CTTTAAGTAAatgatgatgaaattttcaattttgatatgcAGtattttgc
tgGGCTCAGTAGAAAGTCAAGAGCTCAAATTCAAGAAAGACAAGTCATGC
TCCACCAAGATGGCGTCCAAGCTGCGAAGACACAGTATTTTAATCGCAAG
CAAGATCTCAGCCAACCAAGCAAATATCGCTACTTGGCGAGATTGTTTTA
CCAGCTGTTCGAATCACGCAAATTGTGCAATGTTTGCACATCACGAAAAA
GAGAAACGCTGTATGTTTTTCAAAGAGATTTTGGTCAATGAAGTGCTTTC
AAGACTCATTTTTGAGGGATGGAGTCCTGGCAGAATAAACGCCCAAGAAA
AAATCATTTCATACATTTCGGATACCTGTTCTGAGGAGTATTGCCGAGAT
TCATGTCTATCTGGAGTAAGAGAGACTTGCACCCCGTCTTTATACAGACT
ACCTGAATGTACAGCATATGATGGCGTTTTTACTGGCTGCGATCATGCAA
GGAAAATACTTCAGCAAAATCCATCCATGGGTTTATCATTATCCTCAGCC
TCGTTCGACCAAACCATCAGGATAAGCATTGGAGGAGGTTCGGTTTATGT
CCCCTGTCAAGAACACGTTGAATATACTCAGATCGTAGCCGGAGATGGTA
AATGCATGGCCGATGATAAAGATAGTTGGTACGGCTTCTATCGACGTGAT
TGTTATGACGGTTATGCCACAACCTACGCTTACAATCGTATAACGCATGT
GTTGAAACCATTATATCGTTCCTGGCAATTCTTTAAGTAAatgatgatga
aattttcaattttgatatgcAGtattttgctgGGCTCAGTAGAAAGTCAA
GAGCTCAAATTCAAGAAAGACAAGTCATGCTCCACCAAGATGGCGTCCAA
GCTGCGAAGACACAGTATTTTAATCGCAAGCAAGATCTCAGCCAACCAAG
CAAATATCGCTACTTGGCGAGATTGTTTTACCAGCTGTTCGAATCACGCA
AATTGTGCAATGTTTGCACATCACGAAAAAGAGAAACGCTGTATGTTTTT
CAAAGAGATTTTGGTCAATGAAGTGCTTTCAAGACTCATTTTTGAGGGAT
GGAGTCCTGGCAGAATAAACGCCCAAGAAAAAATCATTTCATACATTTCG
GATACCTGTTCTGAGGAGTATTGCCGAGATTCATGTCTATCTGGAGTAAG
AGAGACTTGCACCCCGTCTTTATACAGACTACCTGAATGTACAGCATATG
ATGGCGTTTTTACTGGCTGCGATCATGCAAGGAAAATACTTCAGCAAAAT
CCATCCATGGGTTTATCATTATCCTCAGCCTCGTTCGACCAAACCATCAG
GATAAGCATTGGAGGAGGTTCGGTTTATGTCCCCTGTCAAGAACACGTTG
AATATACTCAGATCGTAGCCGGAGATGGTAAATGCATGGCCGATGATAAA
GATAGTTGGTACGGCTTCTATCGACGTGATTGTTATGACGGTTATGCCAC
AACCTACGCTTACAATCGTATAACGCATGTGTTGAAACCATTATATCGTT
CCTGGCAATTCTTTAAGTAAatgatgatgaaattttcaattttgatatgc
AGtattttgctgGGCTCAGTAGAAAGTCAAGAGCTCAAATTCAAGAAAGA
CAAGTCATGCTCCACCAAGATGGCGTCCAAGCTGCGAAGACACAGTATTT
TAATCGCAAGCAAGATCTCAGCCAACCAAGCAAATATCGCTACTTGGCGA
GATTGTTTTACCAGCTGTTCGAATCACGCAAATTGTGCAATGTTTGCACA
TCACGAAAAAGAGAAACGCTGTATGTTTTTCAAAGAGATTTTGGTCAATG
AAGTGCTTTCAAGACTCATTTTTGAGGGATGGAGTCCTGGCAGAATAAAC
GCCCAAGAAAAAATCATTTCATACATTTCGGATACCTGTTCTGAGGAGTA
TTGCCGAGATTCATGTCTATCTGGAGTAAGAGAGACTTGCACCCCGTCTT
TATACAGACTACCTGAATGTACAGCATATGATGGCGTTTTTACTGGCTGC
GATCATGCAAGGAAAATACTTCAGCAAAATCCATCCATGGGTTTATCATT
ATCCTCAGCCTCGTTCGACCAAACCATCAGGATAAGCATTGGAGGAGGTT
CGGTTTATGTCCCCTGTCAAGAACACGTTGAATATACTCAGATCGTAGCC
GGAGATGGTAAATGCATGGCCGATGATAAAGATAGTTGGTACGGCTTCTA
TCGACGTGATTGTTATGACGGTTATGCCACAACCTACGCTTACAATCGTA
TAACGCATGTGTTGAAACCATTATATCGTTCCTGGCAATTCTTTAAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010939XLOC_010939Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019459-exon-sc0000328-1491911889:152093..152126TCONS_00019459-exon-sc0000328-1491911889:152093..152126Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1510915933:152093..152126TCONS_00019459-exon-sc0000328-1510915933:152093..152126Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1575043694:152093..152126TCONS_00019459-exon-sc0000328-1575043694:152093..152126Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1491911889:154740..155049TCONS_00019459-exon-sc0000328-1491911889:154740..155049Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1510915933:154740..155049TCONS_00019459-exon-sc0000328-1510915933:154740..155049Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1575043694:154740..155049TCONS_00019459-exon-sc0000328-1575043694:154740..155049Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1491911889:157582..157702TCONS_00019459-exon-sc0000328-1491911889:157582..157702Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1510915933:157582..157702TCONS_00019459-exon-sc0000328-1510915933:157582..157702Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1575043694:157582..157702TCONS_00019459-exon-sc0000328-1575043694:157582..157702Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1491911889:158230..158376TCONS_00019459-exon-sc0000328-1491911889:158230..158376Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1510915933:158230..158376TCONS_00019459-exon-sc0000328-1510915933:158230..158376Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1575043694:158230..158376TCONS_00019459-exon-sc0000328-1575043694:158230..158376Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1491911889:160719..160939TCONS_00019459-exon-sc0000328-1491911889:160719..160939Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1510915933:160719..160939TCONS_00019459-exon-sc0000328-1510915933:160719..160939Clytia hemisphaericaexon
TCONS_00019459-exon-sc0000328-1575043694:160719..160939TCONS_00019459-exon-sc0000328-1575043694:160719..160939Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019459-proteinTCONS_00019459-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000328supercontigsc0000328:152093..160939 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.113711	0.388101	0.514996	0.881726	0.153345	0	0	0.0684321	0.0479109	0.0664099	0.28801	0.378654	4.1594	2.66497	1.48508	1.81482	0.426811	0.841922	4.24933	5.8342	0.054971	0.402194	0.391135	0.592665	0.354786	0.381356	0.07796	0.249603	0	0.064294
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019459 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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