TCONS_00019546 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019546
Unique NameTCONS_00019546
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length119

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019546 ID=TCONS_00019546|Name=TCONS_00019546|organism=Clytia hemisphaerica|type=transcript|length=119bp
GTCAAAAGAGAAGTTGTTTATTGGGATCGTGAAGATtgtgattttttatt
atcaaactGTCAACGGATTCACTCGTCGGAACATTTAAAAGTCTTCATGA
GAATTTTATCATTagcaaa
Run BLAST on NCBI

transcript from alignment at sc0000329:134021..134139

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019546 ID=TCONS_00019546|Name=TCONS_00019546|organism=Clytia hemisphaerica|type=transcript|length=119bp|location=Sequence derived from alignment at sc0000329:134021..134139 (Clytia hemisphaerica)
tttgctAATGATAAAATTCTCATGAAGACTTTTAAATGTTCCGACGAGTG
AATCCGTTGACagtttgataataaaaaatcacaATCTTCACGATCCCAAT
AAACAACTTCTCTTTTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010988XLOC_010988Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019546-exon-sc0000329-1491911889:134021..134139TCONS_00019546-exon-sc0000329-1491911889:134021..134139Clytia hemisphaericaexon
TCONS_00019546-exon-sc0000329-1510915933:134021..134139TCONS_00019546-exon-sc0000329-1510915933:134021..134139Clytia hemisphaericaexon
TCONS_00019546-exon-sc0000329-1575043694:134021..134139TCONS_00019546-exon-sc0000329-1575043694:134021..134139Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000329supercontigsc0000329:134021..134139 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019546 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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