TCONS_00019561 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019561
Unique NameTCONS_00019561
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1918

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019561 ID=TCONS_00019561|Name=TCONS_00019561|organism=Clytia hemisphaerica|type=transcript|length=1918bp
ATTTCTTTAggtgaaaaataaaaagtatgaACAATGTTTGACGCTTATCA
AAGTGGTGAGGATGGCCACCGGAGAATCAAGTACTGAAGACGaattgtca
cgtgatttctcaACATTGAGTACATCCTCCTCTGTTACAAGTTCCATAAG
TAGAAAAAGTAATGCAAGTACGTTAAAAGATGACCAAGATGGTGAAGATT
TATCTCGTCAAGGAACAACAATGTCGGATGAATCAACGTCATCCCGACCG
ACCTCTGGACTATCGNTATCTCGTCAAGGAACGACAATGTCGGATGAATC
AACGTCATCCCGACCGACCTCTGGACTATCGTCGGTAGCTACTGCTTCCC
GACAAAATACGGTTGGTTCGTTAAGAAGTGAGAATAATTCACGACAATCT
CAACGATCGCTTTCTAGAGGAAGCACTATTCGAAATGATGATCCCGAAGT
GAAGAATAATTCGGTTTCACGAGAATCTTCTGTCTTGTCTTCTCGGAATG
GATATGATGACGATTTTCATGACGACGAAGAATCCAGTCCAACTTCGGCA
TCAAGCCGACAACAGTCGTTTGTCGGGAAATCACCAAGTAATGATAATAG
TGATGATACTGAGAGCGAAAGTGAAGATATGGGGAAAATGGAGAAAGAAA
ACagtgttttgattgaaaaagatGGGAAATTTGAGTTAGTCGAAGAACGA
AACTTAACTATCGATCAACGAGAAGCTCTCGGTTTAACGAAACGAGAAAA
ACGAAAACCGAACACGTTGAACATTCCCGCGTCTAGTGGTCGTGTCCGTA
AATCAAGTAACCCGGAGTACGCACATTTGAAATCGGAGTACGGTATGAGT
GAACAACAGAAGGAGATGAAATTTCGACGTGTTTCCGTCATGCAGATGAG
ACGACAGGAGGAGAAGGAACGAATGAAACAAGAAGACGAAGAGAAGAAGA
GAGCAGCTGATAAGTCGTTCCAGCAATGGCTAGCACAAAAGAAAGAGACC
AAAGCAGACAAGAAGCCTGCTACTCCACATCAAcgtaagaaaaagaagac
agtACCTAGTGTACAATTGAGCGAAGAAGAAATGCAGCGGCGGGAGCTTC
AAGACCGCGCGTTCAAACAATGGATAGATGAGAAGGAAGAGCAAACGAAA
GATGAGAAAAAGATGGAGGAAATCAGACTAGCTGAAGAAGCACAAAATTA
TGTTGTCAGAGATCGAAAACAATGTGACAAAGCTTTTAAAGAATggttga
aaaagaagaaagtggAAAGACAATCAACGCCCACTCAAACCACCCGGAAG
AAGTCAACCTACACACCTGCAGGTGTCACGCCAACTGCAACCAAGAAGAA
GTCTTTAGCACCTATATACGCTCCTTCTCTTGAGCAGAGGCGCCCTCGTT
CTTCTGTACGTAGCATGGCGGCGAATGGGATggattgcaaaaatgacgtc
gAAGTAAAGAGGAGAcctaaaacatccaaaataagGATAACAGACAATTT
TGGATATCGACACCCTGCATCAATCGACGACTTCATCGAAAGGAGGAAGT
GATAAGCATCGTTGAGCGATAAATGGTATTAACTTGTTTTTCAATCAAAG
ATTACCGTAACTTTGCTTGACGAACCATTCTCTAGTTGTCACCACCTTTG
CTCCAACGACACAGCAACTGATGTTAGGAACCAAGGTATAATGATGAACA
TTGTAACAGACTTGTAACATTCTGCCTCTCTGATATTGACTAAAATCGAG
ATTTTGCGATTTGGAATGTGGGTTTCAATCAACCATATAAACATGATAAC
TATTGAATCCCTCCATGATGGAATCAGAAAAAAGTCGACGAATCCGGGac
CATTGTGCTTAAACAGCCAGTACTGATTGGACAAGCTGTTCATAATTACT
CTGCGCTACACTTAATTG
Run BLAST on NCBI

protein sequence of TCONS_00019561-protein

>TCONS_00019561-protein ID=TCONS_00019561-protein|Name=TCONS_00019561-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
MATGESSTEDELSRDFSTLSTSSSVTSSISRKSNASTLKDDQDGEDLSRQ
GTTMSDESTSSRPTSGLSXSRQGTTMSDESTSSRPTSGLSSVATASRQNT
VGSLRSENNSRQSQRSLSRGSTIRNDDPEVKNNSVSRESSVLSSRNGYDD
DFHDDEESSPTSASSRQQSFVGKSPSNDNSDDTESESEDMGKMEKENSVL
IEKDGKFELVEERNLTIDQREALGLTKREKRKPNTLNIPASSGRVRKSSN
PEYAHLKSEYGMSEQQKEMKFRRVSVMQMRRQEEKERMKQEDEEKKRAAD
KSFQQWLAQKKETKADKKPATPHQRKKKKTVPSVQLSEEEMQRRELQDRA
FKQWIDEKEEQTKDEKKMEEIRLAEEAQNYVVRDRKQCDKAFKEWLKKKK
VERQSTPTQTTRKKSTYTPAGVTPTATKKKSLAPIYAPSLEQRRPRSSVR
SMAANGMDCKNDVEVKRRPKTSKIRITDNFGYRHPASIDDFIERRK
Run BLAST on NCBI

transcript from alignment at sc0000331:74280..80047+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019561 ID=TCONS_00019561|Name=TCONS_00019561|organism=Clytia hemisphaerica|type=transcript|length=5768bp|location=Sequence derived from alignment at sc0000331:74280..80047+ (Clytia hemisphaerica)
ATTTCTTTAggtgaaaaataaaaagtatgaACAATGTTTGACGCTTATCA
AAGTGGTGAGGATGGCCACCGGAGAATCAAGTACTGAAGACGaattgtca
cgtgatttctcaACATTGAGTACATCCTCCTCTGTTACAAGTTCCATAAG
TAGAAAAAGTAATGCAAGTACGTTAAAAGATGACCAAGATGGTGAAGATT
TATCTCGTCAAGGAACAACAATGTCGGATGAATCAACGTCATCCCGACCG
ACCTCTGGACTATCGNTATCTCGTCAAGGAACGACAATGTCGGATGAATC
AACGTCATCCCGACCGACCTCTGGACTATCGTCGGTAGCTACTGCTTCCC
GACAAAATACGGTTGGTTCGTTAAGAAGTGAGAATAATTCACGACAATCT
CAACGATCGCTTTCTAGAGGAAGCACTATTCGAAATGATGATCCCGAAGT
GAAGAATAATTCGGTTTCACGAGAATCTTCTGTCTTGTCTTCTCGGAATG
GATATGATGACGATTTTCATGACGACGAAGAATCCAGTCCAACTTCGGCA
TCAAGCCGACAACAGTCGTTTGTCGGGAAATCACCAAGTAATGATAATAG
TGATGATACTGAGAGCGAAAGTGAAGATATGGGGAAAATGGAGAAAGAAA
ACagtgttttgattgaaaaagatGGGAAATTTGAGTTAGTCGAAGAACGA
AACTTAACTATCGATCAACGAGAAGCTCTCGGTTTAACGAAACGAGAAAA
ACGAAAACCGAACACGTTGAACATTCCCGCGTCTAGTGGTCGTGTCCGTA
AATCAAGTAACCCGGAGTACGCACATTTGAAATCGGAGTACGGTATGAGT
GAACAACAGAAGGAGATGAAATTTCGACGTGTTTCCGTCATGCAGATGAG
ACGACAGGAGGAGAAGGAACGAATGAAACAAGAAGACGAAGAGAAGAAGA
GAGCAGCTGATAAGTCGTTCCAGGTACACTATCGTATTGTGTGATGTTTT
GGTCAAGGTTTTATATAAACTGGCTTTTGCGGGTTAACTATAATGACTGA
AAAAATTCTCGTCTGgctaaaaaaatttctcaattgTTGGAAAATAATTA
AGTTGAGGTTAGCATAGTTCGCACGTTCGAAAGTGAACTTTTGGTTTGAT
TACTATTTTTCTCATTGCTCACAGGTTGTCGATCATATACAGCCCGTTCT
TTTTGTTGGTTTATTCGTAAGACAGAGAGTAGTTTTTGGTGTTTGGTCTG
CTCGAGCTAGCAATAAACTAATTTTAAATTCTCCTTTTATTCTTCCAGCA
ATGGCTAGCACAAAAGAAAGAGACCAAAGCAGACAAGAAGCCTGCTACTC
CACATCAAcgtaagaaaaagaagacagtACCTAGTGTACAATTGAGCGAA
GAAGAAATGCAGCGGCGGGAGCTTCAAGACCGCGCGTTCAAACAATGGAT
AGATGAGAAGGAAGAGCAAACGAAAGATGAGAAAAAGATGGAGGAAATCA
GACTAGCTGAAGAAGCACAAAATTATGTTGTCAGAGATCGAAAACAATGT
GACAAAGCTTTTAAAGAGTGAggattttgtttatgttgatcTCAGCCTTT
TATTTTNGGCTGATAAATCGTTCAAGGTACACTATCGTATTGTGTGATGT
TTTGGTCAAGGTTTTATATAAACTGGCTTTTGCGGGTTAACTATAATGAC
TGAAAAAATTCTCGTCTAgctaaaaaaatttctcaattgTTGGAAAATAA
TTAAGTTGAGGTTAGCATAGTTCGCACGTTCGAAAGTGAACTTTTGGTTT
CTTTGATTACTATTTTTCTCATTGCTCACATGGGTCACAGGTTGTCGATC
ATATACAGCCCGTTCTTTTTGTTGGTTTATTCGTTAGACAAAAAGTAGTT
TTTGGTGTTTGGTCTGCTCGAGCTAGCAATAAACTAATTTTAAATTCTCC
TTTTATTTTTCCAGCAATGGCTAGCACAAAAGAAAGAGACCAAAGCAGAC
AAGAAGCCTGCTACTCCACATCAAcgtaagaaaaagaagacagtACCTAG
TGTACAATTGAGCGAAGAAGAAATGCAGCGGCGGGAGCTTCAAGACCGCG
CGTTCAAACAATGGATAGATGAGAAGGAAGAGCAAACGAAAGATGAGAAA
AAGATGGAGGAAATCAGACTAGCTGAAGAAGCACAAAATTATGTTGTCAG
AGATCGAAAACAATGTGACAAAGCTTTTAAAGAGTGAggattttgtttat
gttgatcTCAgccttttattttttgaaatctttcctGCAAATCTTTCTGG
CTTAATCATATTTAAGATACCAGCTTGTCCAACAGTAAAGAAAATAATAA
GCGACTTTTATGATTTTCCGCCTATCATTATGTTGGAGACAGAAATTGAC
CTTGAAGCACTGCAGAGGTTCACGAGGGAATTTCCTTTCTCTATCAAGCA
AGAAAAGTAAAACCTTATGTTGAcagaataaataatttttttttgattaa
atAGTAATTTACCTTTACTTGTCTTAGATggttgaaaaagaagaaagtgg
AAAGACAATCAACGCCCACTCAAACCACCCGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGCTGATAAATCGTTCAAGGTACACTAT
CGTATTGTGTGATGTTTTGGTCAAGGTTTTATATAAACTGGCTTTTGCGG
GTTAACTATAATGACTGAAAAAATTCTCGTCTAgctaaaaaaatttctca
attgTTGGAAAATAATTAAGTTGAGGTTAGCATAGTTCGCACGTTCGAAA
GTGAACTTTTGGTTTCTTTGATTACTATTTTTCTCATTGCTCACATGGGT
CACAGGTTGTCGATCATATACAGCCCGTTCTTTTTGTTGGTTTATTCGTT
AGACAAAAAGTAGTTTTTGGTGTTTGGTCTGCTCGAGCTAGCAATAAACT
AATTTTAAATTCTCCTTTTATTTTTCCAGCAATGGCTAGCACAAAAGAAA
GAGACCAAAGCAGACAAGAAGCCTGCTACTCCACATCAAcgtaagaaaaa
gaagacagtACCTAGTGTACAATTGAGCGAAGAAGAAATGCAGCGGCGGG
AGCTTCAAGACCGCGCGTTCAAACAATGGATAGATGAGAAGGAAGAGCAA
ACGAAAGATGAGAAAAAGATGGAGGAAATCAGACTAGCTGAAGAAGCACA
AAATTATGTTGTCAGAGATCGAAAACAATGTGACAAAGCTTTTAAAGAGT
GAggattttgtttatgttgatcTCAgccttttattttttgaaatctttcc
tGCAAATCTTTCTGGCTTAATCATATTTAAGATACCAGCTTGTCCAACAG
TAAAGAAAATAATAAGCGACTTTTATGATTTTCCGCCTATCATTATGTTG
GAGACAGAAATTGACCTTGAAGCACTGCAGAGGTTCACGAGGGAATTTCC
TTTCTCTATCAAGCAAGAAAAGTAAAACCTTATGTTGAcagaataaataa
tttttttttgattaaatAGTAATTTACCTTTACTTGTCTTAGATggttga
aaaagaagaaagtggAAAGACAATCAACGCCCACTCAAACCACCCGGAAG
AAGTCAACCTACACACCTGCAGGTGTCACGCCAACTGCAACCAAGAAGAA
GTCTTTAGCACCTATATACGCTCCTTCTCTTGAGCAGAGGCGCCCTCGTT
CTTCTGTACGTAGCATGGCGGCGAATGGGATggattgcaaaaatgacgtc
gAAGTAAAGAGGAGAcctaaaacatccaaaataagGTATTTCTTAATTGC
TGATAGTTTGTCTTTTATTAATGCCTTTTATCATCCCGAACTCAATTTTA
ATCGTTCTAAAGTTCTTTTTTTGTGAACGCTCTCCTCTTTAACTCTTACT
TGGCATTATGTTAGGATAACAGACAATTTTGGATATCGACACCCTGCATC
AATCGACGACTTCATCGAAAGGAGGAAGTGATAAGCATCGTTGAGCGATA
AATGGTATTAACTTGTTTTTCAATCAAAGATTACCGTAACTTTGCTTGAC
GAACCATTCTCTAGTTGTCACCACCTTTGCTCCAACGACACAGCAACTGA
TGTTAGGAACCAAGGTATAATGATGAACATTGTAACAGACTTGTAACATT
CTGCCTCTCTGATATTGACTAAAATCGAGATTTTGCGATTTGGAATGTGG
GTTTCAATCAACCATATAAACATGATAACTATTGAATCCCTCCATGATGG
AATCAGAAAAAAGTCGACGAATCCGGGGTAGGTCTCTATATTTTCAAGGG
AGAGTATCTTTAAAGTTTACCGAAATTCCAAGAATCTCTGAAATTTCGAA
GAAAATAAAAGGGAGAATATCttaaaagtttgttaaaattCCAGGAAGCT
GAAGTTCCTGAATAAATCAAGGCATGACAAGTTAAAAGTTTTATCGATTC
AGCTTTTTCCATCAAAGTTTTACATACAGACTTAATTACCTAACACTTAG
GAATAAACTGTATACTGCTCTTTTTAACATGTTATACAtttattttagtt
cgaatttaTTTTGCTACATTATTTTAGGATAGggactttttttgattttg
atttttttctcgataatCAAACCATTTCTTCTCATCCaaaattgtaaata
aaaaattactaaaaacaAAGAATCTTTATTTATATCTTATATCAAAGATA
ATTAGATTTTCTCAAATGATTTTAATTGTAAATTTTATTCTTTTACTAAA
GATAATATTTTTAATCCATCATGGTTATTTtcctgaaaatcaaaatttca
tgacATTTTTTAAAACCAGTCTCCTTGAAATCTTgagaatttttcacaaa
aatgcacATTtggtctgtttttttttaattctaactGATCAGTTTATAAT
ATCACCAACATTTCAGATTAGTCAGGGATATAAATCCCAACTAAAAGCTC
TTTGGAaacattttgaaggaaaaaacaCTTGCGTCACTTGCGTCTTTACC
AAAAGAATTGTCAAGCTGTTCTATTTCTGATTGCTCTTAACTTCTTAACG
ACTTTAATTAACCTGTGATTAAACTTTCAGACATTTGAGTAATTAAATAG
CCTATTTTAAGGCTGACAAACACCTTAGAAACTCGTTTGTGATTGGTTAG
TAATAGGTCATGAATCAATTTAGTAAGGATTGGGATGAGGGGGACTCTAG
GTAAAAGGATCTATCGGTAAGACAATTCAACCCCTTTAATTCAATTTGCT
TGTTTTAAATAAATATTCGTTaagatatatttttatttagatatatttca
ttcattttagtttaattgcAATAGGTGACTTAAATTCCAAATTGTGGACG
AGTTAATCCAGAAGAAAAATGTCTTCTATAATTGCTGGACTACAATATGT
TGTTATTGTCGTTGGTATTGTATTCTCCAGACATGATGCCAGCTTCTTTA
CGGTTGGCTGCTCCCATTAAAATCGACTTTTGATAGGGTAATAATTCATA
ATGACATATATGTCTAACAATTCTCTTTTTAGGATAAGATTTACTGATAA
ACTAGGATTTCAGTTGTCTTGATTCAAGACCGGTCGTTTGTGGATATAAC
AAGAATCTAAAATTTCGAAAGgtctaaatattttaaatttttatttagac
CATTGTGCTTAAACAGCCAGTACTGATTGGACAAGCTGTTCATAATTACT
CTGCGCTACACTTAATTG

Coding sequence (CDS) from alignment at sc0000331:74280..80047+

>TCONS_00019561 ID=TCONS_00019561|Name=TCONS_00019561|organism=Clytia hemisphaerica|type=CDS|length=5964bp|location=Sequence derived from alignment at sc0000331:74280..80047+ (Clytia hemisphaerica)
ATGGCCACCGGAGAATCAAGTACTGAAGACGaattgtcacgtgatttctc
aACATTGAGTACATCCTCCTCTGTTACAAGTTCCATAAGTAGAAAAAGTA
ATGCAAGTACGTTAAAAGATGACCAAGATGGTGAAGATTTATCTCGTCAA
GGAACAACAATGTCGGATGAATCAACGTCATCCCGACCGACCTCTGGACT
ATCGNTATCTCGTCAAGGAACGACAATGTCGGATGAATCAACGTCATCCC
GACCGACCTCTGGACTATCGTCGGTAGCTACTGCTTCCCGACAAAATACG
GTTGGTTCGTTAAGAAGTGAGAATAATTCACGACAATCTCAACGATCGCT
TTCTAGAGGAAGCACTATTCGAAATGATGATCCCGAAGTGAAGAATAATT
CGGTTTCACGAGAATCTTCTGTCTTGTCTTCTCGGAATGGATATGATGAC
GATTTTCATGACGACGAAGAATCCAGTCCAACTTCGGCATCAAGCCGACA
ACAGTCGTTTGTCGGGAAATCACCAAGTAATGATAATAGTGATGATACTG
AGAGCGAAAGTGAAGATATGGGGAAAATGGAGAAAGAAAACagtgttttg
attgaaaaagatGGGAAATTTGAGTTAGTCGAAGAACGAAACTTAACTAT
CGATCAACGAGAAGCTCTCGGTTTAACGAAACGAGAAAAACGAAAACCGA
ACACGTTGAACATTCCCGCGTCTAGTGGTCGTGTCCGTAAATCAAGTAAC
CCGGAGTACGCACATTTGAAATCGGAGTACGGTATGAGTGAACAACAGAA
GGAGATGAAATTTCGACGTGTTTCCGTCATGCAGATGAGACGACAGGAGG
AGAAGGAACGAATGAAACAAGAAGACGAAGAGAAGAAGAGAGCAGCTGAT
AAGTCGTTCCAGCAATGGCTAGCACAAAAGAAAGAGACCAAAGCAGACAA
GAAGCCTGCTACTCCACATCAAcgtaagaaaaagaagacagtACCTAGTG
TACAATTGAGCGAAGAAGAAATGCAGCGGCGGGAGCTTCAAGACCGCGCG
TTCAAACAATGGATAGATGAGAAGGAAGAGCAAACGAAAGATGAGAAAAA
GATGGAGGAAATCAGACTAGCTGAAGAAGCACAAAATTATGTTGTCAGAG
ATCGAAAACAATGTGACAAAGCTTTTAAAGAATggttgaaaaagaagaaa
gtggAAAGACAATCAACGCCCACTCAAACCACCCGGAAGAAGTCAACCTA
CACACCTGCAGGTGTCACGCCAACTGCAACCAAGAAGAAGTCTTTAGCAC
CTATATACGCTCCTTCTCTTGAGCAGAGGCGCCCTCGTTCTTCTGTACGT
AGCATGGCGGCGAATGGGATggattgcaaaaatgacgtcgAAGTAAAGAG
GAGAcctaaaacatccaaaataagGATAACAGACAATTTTGGATATCGAC
ACCCTGCATCAATCGACGACTTCATCGAAAGGAGGAAGTGAATGGCCACC
GGAGAATCAAGTACTGAAGACGaattgtcacgtgatttctcaACATTGAG
TACATCCTCCTCTGTTACAAGTTCCATAAGTAGAAAAAGTAATGCAAGTA
CGTTAAAAGATGACCAAGATGGTGAAGATTTATCTCGTCAAGGAACAACA
ATGTCGGATGAATCAACGTCATCCCGACCGACCTCTGGACTATCGNTATC
TCGTCAAGGAACGACAATGTCGGATGAATCAACGTCATCCCGACCGACCT
CTGGACTATCGTCGGTAGCTACTGCTTCCCGACAAAATACGGTTGGTTCG
TTAAGAAGTGAGAATAATTCACGACAATCTCAACGATCGCTTTCTAGAGG
AAGCACTATTCGAAATGATGATCCCGAAGTGAAGAATAATTCGGTTTCAC
GAGAATCTTCTGTCTTGTCTTCTCGGAATGGATATGATGACGATTTTCAT
GACGACGAAGAATCCAGTCCAACTTCGGCATCAAGCCGACAACAGTCGTT
TGTCGGGAAATCACCAAGTAATGATAATAGTGATGATACTGAGAGCGAAA
GTGAAGATATGGGGAAAATGGAGAAAGAAAACagtgttttgattgaaaaa
gatGGGAAATTTGAGTTAGTCGAAGAACGAAACTTAACTATCGATCAACG
AGAAGCTCTCGGTTTAACGAAACGAGAAAAACGAAAACCGAACACGTTGA
ACATTCCCGCGTCTAGTGGTCGTGTCCGTAAATCAAGTAACCCGGAGTAC
GCACATTTGAAATCGGAGTACGGTATGAGTGAACAACAGAAGGAGATGAA
ATTTCGACGTGTTTCCGTCATGCAGATGAGACGACAGGAGGAGAAGGAAC
GAATGAAACAAGAAGACGAAGAGAAGAAGAGAGCAGCTGATAAGTCGTTC
CAGCAATGGCTAGCACAAAAGAAAGAGACCAAAGCAGACAAGAAGCCTGC
TACTCCACATCAAcgtaagaaaaagaagacagtACCTAGTGTACAATTGA
GCGAAGAAGAAATGCAGCGGCGGGAGCTTCAAGACCGCGCGTTCAAACAA
TGGATAGATGAGAAGGAAGAGCAAACGAAAGATGAGAAAAAGATGGAGGA
AATCAGACTAGCTGAAGAAGCACAAAATTATGTTGTCAGAGATCGAAAAC
AATGTGACAAAGCTTTTAAAGAATggttgaaaaagaagaaagtggAAAGA
CAATCAACGCCCACTCAAACCACCCGGAAGAAGTCAACCTACACACCTGC
AGGTGTCACGCCAACTGCAACCAAGAAGAAGTCTTTAGCACCTATATACG
CTCCTTCTCTTGAGCAGAGGCGCCCTCGTTCTTCTGTACGTAGCATGGCG
GCGAATGGGATggattgcaaaaatgacgtcgAAGTAAAGAGGAGAcctaa
aacatccaaaataagGATAACAGACAATTTTGGATATCGACACCCTGCAT
CAATCGACGACTTCATCGAAAGGAGGAAGTGAATGGCCACCGGAGAATCA
AGTACTGAAGACGaattgtcacgtgatttctcaACATTGAGTACATCCTC
CTCTGTTACAAGTTCCATAAGTAGAAAAAGTAATGCAAGTACGTTAAAAG
ATGACCAAGATGGTGAAGATTTATCTCGTCAAGGAACAACAATGTCGGAT
GAATCAACGTCATCCCGACCGACCTCTGGACTATCGNTATCTCGTCAAGG
AACGACAATGTCGGATGAATCAACGTCATCCCGACCGACCTCTGGACTAT
CGTCGGTAGCTACTGCTTCCCGACAAAATACGGTTGGTTCGTTAAGAAGT
GAGAATAATTCACGACAATCTCAACGATCGCTTTCTAGAGGAAGCACTAT
TCGAAATGATGATCCCGAAGTGAAGAATAATTCGGTTTCACGAGAATCTT
CTGTCTTGTCTTCTCGGAATGGATATGATGACGATTTTCATGACGACGAA
GAATCCAGTCCAACTTCGGCATCAAGCCGACAACAGTCGTTTGTCGGGAA
ATCACCAAGTAATGATAATAGTGATGATACTGAGAGCGAAAGTGAAGATA
TGGGGAAAATGGAGAAAGAAAACagtgttttgattgaaaaagatGGGAAA
TTTGAGTTAGTCGAAGAACGAAACTTAACTATCGATCAACGAGAAGCTCT
CGGTTTAACGAAACGAGAAAAACGAAAACCGAACACGTTGAACATTCCCG
CGTCTAGTGGTCGTGTCCGTAAATCAAGTAACCCGGAGTACGCACATTTG
AAATCGGAGTACGGTATGAGTGAACAACAGAAGGAGATGAAATTTCGACG
TGTTTCCGTCATGCAGATGAGACGACAGGAGGAGAAGGAACGAATGAAAC
AAGAAGACGAAGAGAAGAAGAGAGCAGCTGATAAGTCGTTCCAGCAATGG
CTAGCACAAAAGAAAGAGACCAAAGCAGACAAGAAGCCTGCTACTCCACA
TCAAcgtaagaaaaagaagacagtACCTAGTGTACAATTGAGCGAAGAAG
AAATGCAGCGGCGGGAGCTTCAAGACCGCGCGTTCAAACAATGGATAGAT
GAGAAGGAAGAGCAAACGAAAGATGAGAAAAAGATGGAGGAAATCAGACT
AGCTGAAGAAGCACAAAATTATGTTGTCAGAGATCGAAAACAATGTGACA
AAGCTTTTAAAGAATggttgaaaaagaagaaagtggAAAGACAATCAACG
CCCACTCAAACCACCCGGAAGAAGTCAACCTACACACCTGCAGGTGTCAC
GCCAACTGCAACCAAGAAGAAGTCTTTAGCACCTATATACGCTCCTTCTC
TTGAGCAGAGGCGCCCTCGTTCTTCTGTACGTAGCATGGCGGCGAATGGG
ATggattgcaaaaatgacgtcgAAGTAAAGAGGAGAcctaaaacatccaa
aataagGATAACAGACAATTTTGGATATCGACACCCTGCATCAATCGACG
ACTTCATCGAAAGGAGGAAGTGAATGGCCACCGGAGAATCAAGTACTGAA
GACGaattgtcacgtgatttctcaACATTGAGTACATCCTCCTCTGTTAC
AAGTTCCATAAGTAGAAAAAGTAATGCAAGTACGTTAAAAGATGACCAAG
ATGGTGAAGATTTATCTCGTCAAGGAACAACAATGTCGGATGAATCAACG
TCATCCCGACCGACCTCTGGACTATCGNTATCTCGTCAAGGAACGACAAT
GTCGGATGAATCAACGTCATCCCGACCGACCTCTGGACTATCGTCGGTAG
CTACTGCTTCCCGACAAAATACGGTTGGTTCGTTAAGAAGTGAGAATAAT
TCACGACAATCTCAACGATCGCTTTCTAGAGGAAGCACTATTCGAAATGA
TGATCCCGAAGTGAAGAATAATTCGGTTTCACGAGAATCTTCTGTCTTGT
CTTCTCGGAATGGATATGATGACGATTTTCATGACGACGAAGAATCCAGT
CCAACTTCGGCATCAAGCCGACAACAGTCGTTTGTCGGGAAATCACCAAG
TAATGATAATAGTGATGATACTGAGAGCGAAAGTGAAGATATGGGGAAAA
TGGAGAAAGAAAACagtgttttgattgaaaaagatGGGAAATTTGAGTTA
GTCGAAGAACGAAACTTAACTATCGATCAACGAGAAGCTCTCGGTTTAAC
GAAACGAGAAAAACGAAAACCGAACACGTTGAACATTCCCGCGTCTAGTG
GTCGTGTCCGTAAATCAAGTAACCCGGAGTACGCACATTTGAAATCGGAG
TACGGTATGAGTGAACAACAGAAGGAGATGAAATTTCGACGTGTTTCCGT
CATGCAGATGAGACGACAGGAGGAGAAGGAACGAATGAAACAAGAAGACG
AAGAGAAGAAGAGAGCAGCTGATAAGTCGTTCCAGCAATGGCTAGCACAA
AAGAAAGAGACCAAAGCAGACAAGAAGCCTGCTACTCCACATCAAcgtaa
gaaaaagaagacagtACCTAGTGTACAATTGAGCGAAGAAGAAATGCAGC
GGCGGGAGCTTCAAGACCGCGCGTTCAAACAATGGATAGATGAGAAGGAA
GAGCAAACGAAAGATGAGAAAAAGATGGAGGAAATCAGACTAGCTGAAGA
AGCACAAAATTATGTTGTCAGAGATCGAAAACAATGTGACAAAGCTTTTA
AAGAATggttgaaaaagaagaaagtggAAAGACAATCAACGCCCACTCAA
ACCACCCGGAAGAAGTCAACCTACACACCTGCAGGTGTCACGCCAACTGC
AACCAAGAAGAAGTCTTTAGCACCTATATACGCTCCTTCTCTTGAGCAGA
GGCGCCCTCGTTCTTCTGTACGTAGCATGGCGGCGAATGGGATggattgc
aaaaatgacgtcgAAGTAAAGAGGAGAcctaaaacatccaaaataagGAT
AACAGACAATTTTGGATATCGACACCCTGCATCAATCGACGACTTCATCG
AAAGGAGGAAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010996XLOC_010996Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019561-exon-sc0000331-1491911889:74280..75252TCONS_00019561-exon-sc0000331-1491911889:74280..75252Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1510915933:74280..75252TCONS_00019561-exon-sc0000331-1510915933:74280..75252Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1575043694:74280..75252TCONS_00019561-exon-sc0000331-1575043694:74280..75252Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1491911889:75578..75846TCONS_00019561-exon-sc0000331-1491911889:75578..75846Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1510915933:75578..75846TCONS_00019561-exon-sc0000331-1510915933:75578..75846Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1575043694:75578..75846TCONS_00019561-exon-sc0000331-1575043694:75578..75846Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1491911889:77872..78114TCONS_00019561-exon-sc0000331-1491911889:77872..78114Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1510915933:77872..78114TCONS_00019561-exon-sc0000331-1510915933:77872..78114Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1575043694:77872..78114TCONS_00019561-exon-sc0000331-1575043694:77872..78114Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1491911889:78244..78606TCONS_00019561-exon-sc0000331-1491911889:78244..78606Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1510915933:78244..78606TCONS_00019561-exon-sc0000331-1510915933:78244..78606Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1575043694:78244..78606TCONS_00019561-exon-sc0000331-1575043694:78244..78606Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1491911889:79978..80047TCONS_00019561-exon-sc0000331-1491911889:79978..80047Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1510915933:79978..80047TCONS_00019561-exon-sc0000331-1510915933:79978..80047Clytia hemisphaericaexon
TCONS_00019561-exon-sc0000331-1575043694:79978..80047TCONS_00019561-exon-sc0000331-1575043694:79978..80047Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019561-proteinTCONS_00019561-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000331supercontigsc0000331:74280..80047 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.06949e-07	0.861651	2.75464e-08	5.7245e-05	1.00503e-09	0	2.74527e-10	5.99803e-10	1.3834e-05	0.000212943	3.43662	4.13241e-05	1.87456e-06	1.02454e-06	9.50477e-08	1.51262e-07	6.47579e-10	4.67494e-07	1.69948e-08	1.7843e-06	0.0621242	0.00936471	0.0492118	2.83353e-05	1.70172	0	0.00210338	3.89898e-05	0.00167866	0.0763405
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019561 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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