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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019578 ID=TCONS_00019578|Name=TCONS_00019578|organism=Clytia hemisphaerica|type=transcript|length=2024bp
ATAGAATAACAACTGTCGCAAAACATGTGCTTATTTTGATACATCAGTCG
GGTCGACAGTGGGTGGCTGTGGTTTCGGACAATAAAACGATTCAGGAATG
GATCTACACAAAATCTTGATTTTCTTGGTCATTTCTCTCTCGCTTCAAAT
AATATTGGCCGAAGATGACGATGATTTTGTTAGGAATGGATTTTCAGTTG
GCTTGACCGGAGATTCGATGCCTGAAATCACtacaaatgttaaaagtaaT
CGTTACTCGTTAGAGAAAGGTCCAGTTGCTCAGTATTTGAGTTCAATGTT
GGACGAAAAGCGGAAGAAACAGGCTAGTCGTAAACGCCGTGCAGCTACTA
TAGACCCCATAGCATCATCAAAAAGAATGTATCACTTAGAAGTATTCGTT
GTTGCTGATAATACAATATACAGACGATTTGATAACGATTCACAAAAATT
AACTGACCATATACACGAGATTTTTCATATGGTAGATACAATGTATCGac
ctttaaatttccgtgttacCGTCGTTGGAATAGAAATCTGGTCGGATCAT
GATCAAATAGAATTCTCTTTTACGGAGGAACCTTATATGAATCTTATACG
TTTCAATAGTTACGTCCAGAACCGATCAGAAAATTACATGATGGCTGATC
ATGTACATCTAATAACTGGTAAAGGTTTATTCAAAGGTGGCAACATTGGG
TTATCTCATTTCGCGACAGTTTGTTCACCCGATCATGCAACGGCCTTTAC
AGTAAACTTAATTGCTCCAACTAACTTCACAGCAACCGTTGTGGCTCACG
AAATTGGTCATGATCTTGGTATTTTGCACGATAGACCAGGATGCCAATGT
AATGAACCCATAGAAAATAATACTTGTATAATGTCGACAGCTTCGAAAGG
TTTTGAACCATTACCTCGTTTGTTTACTGACTGTAGTTACAATGATATGG
TGCAATACTATCTATCAACATATAAACCAACATGTTTATTCAATGTACCG
ACAGTTACCACTGACGTTACCTCTGCATGTGGTAATAACATCTTAGATGC
TGGAGAAGAATGTGATTGCGGACATCCTTATTTCTGCACCAATCCTTGCT
GTAATCCAAATACTTGTAAGTTGACTGCTGGTTCTCAATGCTACGAAGGT
GGATGTTGTCATGAATGTAAAATTGCATCCAAGGGTACATGTTGTCGGAC
AATGTTAGATAGCACGTGTGATTTACCAGATGTTTGCGATGGAAGCTCTC
ACGTTTGTAAAGATACATATAAAGAGGATCGGACCCCCTGCGAACAAGGT
GGGATGTGTTATAAAGGACATTGTCAATCACACGCGTCTCAATGTCAAAT
GATTTGGGGAGCCGACACTACTGAAAACGGACACAGTGAATGCTATAATC
TTAACAAGAGAGGTGATTGGTATGGACATTGTGGGTCAAGCCCTGGTGAT
TACAGTGCATGCGCAGATCAAGATGTTAAATGTGGAAAACCTTATTGTGC
AAACACACCTCAAGATTATCCAGTTGTTGGATGGAGGAAAGGTGTAGATG
TGCTGACTGTCAAATATAATGACCAACATACACATCGTTGCCATGTACCA
AGAATCACTTTTGGAAGAAACCAGACTAATGAAACAATGGTGCTTGACGG
TACACCGTGTGGTACAAACAAAATGTGTCAAAATCAGAAATGCATTGAAC
TTtcaaccttccaatcaaaatgTTCTGGCTGTCTGGATTATATTGGTAGT
TGTACAAACGATGGTGTTTGTCGCTGCCATACTGGCGTCACTTCTGATAA
GTGTGAGCAGATACACAGTGACTGCATGGCAGTtaacaataacaacaaca
ataacGACAATAACGGCAACGGCAACGACGGACGACAACTACAACCGATG
ACGGTCTTCTCACTCACAATGTTCTGGATGACTGCCATTGAATTGTTATA
TACGATGATTTCATGAGCAAGATGTACCTGATGTGCATTATAAATGATAA
TAGATGTAATAAAGTCAAATTTTG Run BLAST on NCBI protein sequence of TCONS_00019578-protein >TCONS_00019578-protein ID=TCONS_00019578-protein|Name=TCONS_00019578-protein|organism=Clytia hemisphaerica|type=polypeptide|length=622bp
MDLHKILIFLVISLSLQIILAEDDDDFVRNGFSVGLTGDSMPEITTNVKS
NRYSLEKGPVAQYLSSMLDEKRKKQASRKRRAATIDPIASSKRMYHLEVF
VVADNTIYRRFDNDSQKLTDHIHEIFHMVDTMYRPLNFRVTVVGIEIWSD
HDQIEFSFTEEPYMNLIRFNSYVQNRSENYMMADHVHLITGKGLFKGGNI
GLSHFATVCSPDHATAFTVNLIAPTNFTATVVAHEIGHDLGILHDRPGCQ
CNEPIENNTCIMSTASKGFEPLPRLFTDCSYNDMVQYYLSTYKPTCLFNV
PTVTTDVTSACGNNILDAGEECDCGHPYFCTNPCCNPNTCKLTAGSQCYE
GGCCHECKIASKGTCCRTMLDSTCDLPDVCDGSSHVCKDTYKEDRTPCEQ
GGMCYKGHCQSHASQCQMIWGADTTENGHSECYNLNKRGDWYGHCGSSPG
DYSACADQDVKCGKPYCANTPQDYPVVGWRKGVDVLTVKYNDQHTHRCHV
PRITFGRNQTNETMVLDGTPCGTNKMCQNQKCIELSTFQSKCSGCLDYIG
SCTNDGVCRCHTGVTSDKCEQIHSDCMAVNNNNNNNDNNGNGNDGRQLQP
MTVFSLTMFWMTAIELLYTMIS Run BLAST on NCBI transcript from alignment at sc0000331:47672..50366- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019578 ID=TCONS_00019578|Name=TCONS_00019578|organism=Clytia hemisphaerica|type=transcript|length=2695bp|location=Sequence derived from alignment at sc0000331:47672..50366- (Clytia hemisphaerica)
ATAGAATAACAACTGTCGCAAAACATGTGCTTATTTTGATACATCAGTCG
GGTCGACAGTGGGTGGCTGTGGTTTCGGACAATAAAACGATTCAGGAATG
GATCTACACAAAATCTTGATTTTCTTGGTCATTTCTCTCTCGCTTCAAAT
AATATTGGCCGAAGATGACGATGATTTTGTTAGGAATGGATTTTCAGTTG
GCTTGACCGGAGATTCGATGCCTGAAATCACTACAAATGTTAAAAGTAAT
CGTTACTCGTTAGAGAAAGGTCCAGTTGCTCAGTATTTGAGTTCAATGTT
GGACGAAAAGCGGAAGAAACAGGCTAGTCGTAAACGCCGTGCAGCTACTA
TAGACCCCATAGCATCATCAAAAAGAATGTATCACTTAGAAGTATTCGTT
GTTGCTGATAATACAATATACAGACGATTTGATAACGATTCACAAAAATT
AACTGACCATATACACGAGATTTTTCATATGGTAGATACAATGTATCGAC
CTTTAAATTTCCGTGTTACCGTCGTTGGAATAGAAATCTGGTCGGATCAT
GATCAAATAGAATTCTCTTTTACGGAGGAACCTTATATGAATCTTATACG
TTTCAATAGTTACGTCCAGAACCGATCAGAAAATTACATGATGGCTGATC
ATGTACATCTAATAACTGGTAAAGGTTTATTCAAAGGTGGCAACATTGGG
TTATCTCATTTCGCGACAGTTTGTTCACCCGATCATGCAACGGCCTTTAC
AGTAAACTTAATTGCTCCAACTAACTTCACAGCAACCGTTGTGGCTCACG
AAATTGGTCATGATCTTGGTATTTTGCACGATAGACCAGGATGCCAATGT
AATGAACCCATAGAAAATAATACTTGTATAATGTCGACAGCTTCGAAAGG
TTTTGAACCATTACCTCGTTTGTTTACTGACTGTAGTTACAATGATATGG
TGCAATACTATCTATCAACATATAAACCAACATGTTTATTCAATGTACCG
ACAGTTACCACTGACGTTACCTCTGCATGTGGTAATAACATCTTAGATGC
TGGAGAAGAATGTGATTGCGGACATCCTTATTTCTGCACCAATCCTTGCT
GTAATCCAAATACTTGTAAGTTGACTGCTGGTTCTCAATGCTACGAAGGT
GGATGTTGTCATGAATGTAAAATTGCATCCAAGGGTACATGTTGTCGGAC
AATGTTAGATAGCACGTGTGATTTACCAGATGTTTGCGATGGAAGCTCTC
ACGTTTGTAAAGATACATATAAAGAGGATCGGACCCCCTGCGAACAAGGT
GGGATGTGTTATAAAGGACATTGTCAATCACACGCGTCTCAATGTCAAAT
GATTTGGGGAGCCGACACTACTGAAAACGGACACAGTGAATGCTATAATC
TTAACAAGAGAGGTTAGTATGTAAAGATAGAAGGGAAAAGAAGATAGCTA
GGTATTTATATCAGTCAGGCGCAATCAAACAAAATTTTAGTCTACGCAAA
TAAACAACTCTAGGCTTTCTTGCCTTTTCAGAGTTTTATGCTTAGAGCAA
AGGAGATACAGCTTTCAAAATTGATTTTGATGATATAGATGAAAGCCCAC
TTTTCAATTAATACCATGATTAGAATTTGAATGTTAAAAAGTTTAAGTGA
GAGAAAAGAAAGCGGTTGAAATCATTTAACATTTCGATACAATATTGCAG
GTGATTGGTATGGACATTGTGGGTCAAGCCCTGGTGATTACAGTGCATGC
GCAGATCAAGATGTTAAATGTGGAAAACCTTATTGTGCAAACACACCTCA
AGATTATCCAGTTGTTGGATGGAGGAAAGGTGTAGATGTGCTGACTGTCA
AATATAATGACCAACATACACATCGTTGCCATGTACCAAGAATCACTTTT
GGAAGAAACCAGACTAATGAAAGTAAGAAGGATTTTGTTTTCAAAAAGCC
TAAGATGTCTTTTACCAGAGATTTTATAAGGATTTCTTCCCTTCGAGAAC
AAATTTTCAACTGAAATGAATGGAATGGAACAAATGGAATCAAATTCAAT
TTCGCAGTTTTCTGGCTTTCTTTTTTTATATTTCAAATCACGAAATGGTC
TTCAGTAATGGTCCATCTGCAAAGTCTAAAATATGCTGTAGATGTTGATT
AAGATGGGAATCCACAGGCACATGTCTAGATTTTAGAAAGAGNTAATGCG
ATTGAGATTGAGATGAGAATCCACAGGCACATTTCTAGATTTTTCAAAGA
AAAAGCCCACAAGTGCACTAATTTCACCATATATTTCAATCAATTCTTTT
TTCAGCAATGGTGCTTGACGGTACACCGTGTGGTACAAACAAAATGTGTC
AAAATCAGAAATGCATTGAACTTTCAACCTTCCAATCAAAATGTTCTGGC
TGTCTGGATTATATTGGTAGTTGTACAAACGATGGTGTTTGTCGCTGCCA
TACTGGCGTCACTTCTGATAAGTGTGAGCAGATACACAGTGACTGCATGG
CAGTTAACAATAACAACAACAATAACGACAATAACGGCAACGGCAACGAC
GGACGACAACTACAACCGATGACGGTCTTCTCACTCACAATGTTCTGGAT
GACTGCCATTGAATTGTTATATACGATGATTTCATGAGCAAGATGTACCT
GATGTGCATTATAAATGATAATAGATGTAATAAAGTCAAATTTTG Coding sequence (CDS) from alignment at sc0000331:47672..50366- >TCONS_00019578 ID=TCONS_00019578|Name=TCONS_00019578|organism=Clytia hemisphaerica|type=CDS|length=5607bp|location=Sequence derived from alignment at sc0000331:47672..50366- (Clytia hemisphaerica)
CAATGGTGCTTGACGGTACACCGTGTGGTACAAACAAAATGTGTCAAAAT
CAGAAATGCATTGAACTTTCAACCTTCCAATCAAAATGTTCTGGCTGTCT
GGATTATATTGGTAGTTGTACAAACGATGGTGTTTGTCGCTGCCATACTG
GCGTCACTTCTGATAAGTGTGAGCAGATACACAGTGACTGCATGGCAGTT
AACAATAACAACAACAATAACGACAATAACGGCAACGGCAACGACGGACG
ACAACTACAACCGATGACGGTCTTCTCACTCACAATGTTCTGGATGACTG
CCATTGAATTGTTATATACGATGATTTCATGAGTGATTGGTATGGACATT
GTGGGTCAAGCCCTGGTGATTACAGTGCATGCGCAGATCAAGATGTTAAA
TGTGGAAAACCTTATTGTGCAAACACACCTCAAGATTATCCAGTTGTTGG
ATGGAGGAAAGGTGTAGATGTGCTGACTGTCAAATATAATGACCAACATA
CACATCGTTGCCATGTACCAAGAATCACTTTTGGAAGAAACCAGACTAAT
GAAAATGGATCTACACAAAATCTTGATTTTCTTGGTCATTTCTCTCTCGC
TTCAAATAATATTGGCCGAAGATGACGATGATTTTGTTAGGAATGGATTT
TCAGTTGGCTTGACCGGAGATTCGATGCCTGAAATCACTACAAATGTTAA
AAGTAATCGTTACTCGTTAGAGAAAGGTCCAGTTGCTCAGTATTTGAGTT
CAATGTTGGACGAAAAGCGGAAGAAACAGGCTAGTCGTAAACGCCGTGCA
GCTACTATAGACCCCATAGCATCATCAAAAAGAATGTATCACTTAGAAGT
ATTCGTTGTTGCTGATAATACAATATACAGACGATTTGATAACGATTCAC
AAAAATTAACTGACCATATACACGAGATTTTTCATATGGTAGATACAATG
TATCGACCTTTAAATTTCCGTGTTACCGTCGTTGGAATAGAAATCTGGTC
GGATCATGATCAAATAGAATTCTCTTTTACGGAGGAACCTTATATGAATC
TTATACGTTTCAATAGTTACGTCCAGAACCGATCAGAAAATTACATGATG
GCTGATCATGTACATCTAATAACTGGTAAAGGTTTATTCAAAGGTGGCAA
CATTGGGTTATCTCATTTCGCGACAGTTTGTTCACCCGATCATGCAACGG
CCTTTACAGTAAACTTAATTGCTCCAACTAACTTCACAGCAACCGTTGTG
GCTCACGAAATTGGTCATGATCTTGGTATTTTGCACGATAGACCAGGATG
CCAATGTAATGAACCCATAGAAAATAATACTTGTATAATGTCGACAGCTT
CGAAAGGTTTTGAACCATTACCTCGTTTGTTTACTGACTGTAGTTACAAT
GATATGGTGCAATACTATCTATCAACATATAAACCAACATGTTTATTCAA
TGTACCGACAGTTACCACTGACGTTACCTCTGCATGTGGTAATAACATCT
TAGATGCTGGAGAAGAATGTGATTGCGGACATCCTTATTTCTGCACCAAT
CCTTGCTGTAATCCAAATACTTGTAAGTTGACTGCTGGTTCTCAATGCTA
CGAAGGTGGATGTTGTCATGAATGTAAAATTGCATCCAAGGGTACATGTT
GTCGGACAATGTTAGATAGCACGTGTGATTTACCAGATGTTTGCGATGGA
AGCTCTCACGTTTGTAAAGATACATATAAAGAGGATCGGACCCCCTGCGA
ACAAGGTGGGATGTGTTATAAAGGACATTGTCAATCACACGCGTCTCAAT
GTCAAATGATTTGGGGAGCCGACACTACTGAAAACGGACACAGTGAATGC
TATAATCTTAACAAGAGAGCAATGGTGCTTGACGGTACACCGTGTGGTAC
AAACAAAATGTGTCAAAATCAGAAATGCATTGAACTTTCAACCTTCCAAT
CAAAATGTTCTGGCTGTCTGGATTATATTGGTAGTTGTACAAACGATGGT
GTTTGTCGCTGCCATACTGGCGTCACTTCTGATAAGTGTGAGCAGATACA
CAGTGACTGCATGGCAGTTAACAATAACAACAACAATAACGACAATAACG
GCAACGGCAACGACGGACGACAACTACAACCGATGACGGTCTTCTCACTC
ACAATGTTCTGGATGACTGCCATTGAATTGTTATATACGATGATTTCATG
AGTGATTGGTATGGACATTGTGGGTCAAGCCCTGGTGATTACAGTGCATG
CGCAGATCAAGATGTTAAATGTGGAAAACCTTATTGTGCAAACACACCTC
AAGATTATCCAGTTGTTGGATGGAGGAAAGGTGTAGATGTGCTGACTGTC
AAATATAATGACCAACATACACATCGTTGCCATGTACCAAGAATCACTTT
TGGAAGAAACCAGACTAATGAAAATGGATCTACACAAAATCTTGATTTTC
TTGGTCATTTCTCTCTCGCTTCAAATAATATTGGCCGAAGATGACGATGA
TTTTGTTAGGAATGGATTTTCAGTTGGCTTGACCGGAGATTCGATGCCTG
AAATCACTACAAATGTTAAAAGTAATCGTTACTCGTTAGAGAAAGGTCCA
GTTGCTCAGTATTTGAGTTCAATGTTGGACGAAAAGCGGAAGAAACAGGC
TAGTCGTAAACGCCGTGCAGCTACTATAGACCCCATAGCATCATCAAAAA
GAATGTATCACTTAGAAGTATTCGTTGTTGCTGATAATACAATATACAGA
CGATTTGATAACGATTCACAAAAATTAACTGACCATATACACGAGATTTT
TCATATGGTAGATACAATGTATCGACCTTTAAATTTCCGTGTTACCGTCG
TTGGAATAGAAATCTGGTCGGATCATGATCAAATAGAATTCTCTTTTACG
GAGGAACCTTATATGAATCTTATACGTTTCAATAGTTACGTCCAGAACCG
ATCAGAAAATTACATGATGGCTGATCATGTACATCTAATAACTGGTAAAG
GTTTATTCAAAGGTGGCAACATTGGGTTATCTCATTTCGCGACAGTTTGT
TCACCCGATCATGCAACGGCCTTTACAGTAAACTTAATTGCTCCAACTAA
CTTCACAGCAACCGTTGTGGCTCACGAAATTGGTCATGATCTTGGTATTT
TGCACGATAGACCAGGATGCCAATGTAATGAACCCATAGAAAATAATACT
TGTATAATGTCGACAGCTTCGAAAGGTTTTGAACCATTACCTCGTTTGTT
TACTGACTGTAGTTACAATGATATGGTGCAATACTATCTATCAACATATA
AACCAACATGTTTATTCAATGTACCGACAGTTACCACTGACGTTACCTCT
GCATGTGGTAATAACATCTTAGATGCTGGAGAAGAATGTGATTGCGGACA
TCCTTATTTCTGCACCAATCCTTGCTGTAATCCAAATACTTGTAAGTTGA
CTGCTGGTTCTCAATGCTACGAAGGTGGATGTTGTCATGAATGTAAAATT
GCATCCAAGGGTACATGTTGTCGGACAATGTTAGATAGCACGTGTGATTT
ACCAGATGTTTGCGATGGAAGCTCTCACGTTTGTAAAGATACATATAAAG
AGGATCGGACCCCCTGCGAACAAGGTGGGATGTGTTATAAAGGACATTGT
CAATCACACGCGTCTCAATGTCAAATGATTTGGGGAGCCGACACTACTGA
AAACGGACACAGTGAATGCTATAATCTTAACAAGAGAGCAATGGTGCTTG
ACGGTACACCGTGTGGTACAAACAAAATGTGTCAAAATCAGAAATGCATT
GAACTTTCAACCTTCCAATCAAAATGTTCTGGCTGTCTGGATTATATTGG
TAGTTGTACAAACGATGGTGTTTGTCGCTGCCATACTGGCGTCACTTCTG
ATAAGTGTGAGCAGATACACAGTGACTGCATGGCAGTTAACAATAACAAC
AACAATAACGACAATAACGGCAACGGCAACGACGGACGACAACTACAACC
GATGACGGTCTTCTCACTCACAATGTTCTGGATGACTGCCATTGAATTGT
TATATACGATGATTTCATGAGTGATTGGTATGGACATTGTGGGTCAAGCC
CTGGTGATTACAGTGCATGCGCAGATCAAGATGTTAAATGTGGAAAACCT
TATTGTGCAAACACACCTCAAGATTATCCAGTTGTTGGATGGAGGAAAGG
TGTAGATGTGCTGACTGTCAAATATAATGACCAACATACACATCGTTGCC
ATGTACCAAGAATCACTTTTGGAAGAAACCAGACTAATGAAAATGGATCT
ACACAAAATCTTGATTTTCTTGGTCATTTCTCTCTCGCTTCAAATAATAT
TGGCCGAAGATGACGATGATTTTGTTAGGAATGGATTTTCAGTTGGCTTG
ACCGGAGATTCGATGCCTGAAATCACTACAAATGTTAAAAGTAATCGTTA
CTCGTTAGAGAAAGGTCCAGTTGCTCAGTATTTGAGTTCAATGTTGGACG
AAAAGCGGAAGAAACAGGCTAGTCGTAAACGCCGTGCAGCTACTATAGAC
CCCATAGCATCATCAAAAAGAATGTATCACTTAGAAGTATTCGTTGTTGC
TGATAATACAATATACAGACGATTTGATAACGATTCACAAAAATTAACTG
ACCATATACACGAGATTTTTCATATGGTAGATACAATGTATCGACCTTTA
AATTTCCGTGTTACCGTCGTTGGAATAGAAATCTGGTCGGATCATGATCA
AATAGAATTCTCTTTTACGGAGGAACCTTATATGAATCTTATACGTTTCA
ATAGTTACGTCCAGAACCGATCAGAAAATTACATGATGGCTGATCATGTA
CATCTAATAACTGGTAAAGGTTTATTCAAAGGTGGCAACATTGGGTTATC
TCATTTCGCGACAGTTTGTTCACCCGATCATGCAACGGCCTTTACAGTAA
ACTTAATTGCTCCAACTAACTTCACAGCAACCGTTGTGGCTCACGAAATT
GGTCATGATCTTGGTATTTTGCACGATAGACCAGGATGCCAATGTAATGA
ACCCATAGAAAATAATACTTGTATAATGTCGACAGCTTCGAAAGGTTTTG
AACCATTACCTCGTTTGTTTACTGACTGTAGTTACAATGATATGGTGCAA
TACTATCTATCAACATATAAACCAACATGTTTATTCAATGTACCGACAGT
TACCACTGACGTTACCTCTGCATGTGGTAATAACATCTTAGATGCTGGAG
AAGAATGTGATTGCGGACATCCTTATTTCTGCACCAATCCTTGCTGTAAT
CCAAATACTTGTAAGTTGACTGCTGGTTCTCAATGCTACGAAGGTGGATG
TTGTCATGAATGTAAAATTGCATCCAAGGGTACATGTTGTCGGACAATGT
TAGATAGCACGTGTGATTTACCAGATGTTTGCGATGGAAGCTCTCACGTT
TGTAAAGATACATATAAAGAGGATCGGACCCCCTGCGAACAAGGTGGGAT
GTGTTATAAAGGACATTGTCAATCACACGCGTCTCAATGTCAAATGATTT
GGGGAGCCGACACTACTGAAAACGGACACAGTGAATGCTATAATCTTAAC
AAGAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019578-exon-sc0000331-1575043694:48955..50366 | TCONS_00019578-exon-sc0000331-1575043694:48955..50366 | Clytia hemisphaerica | exon |
| TCONS_00019578-exon-sc0000331-1575043694:48445..48666 | TCONS_00019578-exon-sc0000331-1575043694:48445..48666 | Clytia hemisphaerica | exon |
| TCONS_00019578-exon-sc0000331-1575043694:47672..48061 | TCONS_00019578-exon-sc0000331-1575043694:47672..48061 | Clytia hemisphaerica | exon |
| TCONS_00019578-exon-sc0000331-1510915933:48955..50366 | TCONS_00019578-exon-sc0000331-1510915933:48955..50366 | Clytia hemisphaerica | exon |
| TCONS_00019578-exon-sc0000331-1510915933:48445..48666 | TCONS_00019578-exon-sc0000331-1510915933:48445..48666 | Clytia hemisphaerica | exon |
| TCONS_00019578-exon-sc0000331-1510915933:47672..48061 | TCONS_00019578-exon-sc0000331-1510915933:47672..48061 | Clytia hemisphaerica | exon |
| TCONS_00019578-exon-sc0000331-1491911889:48955..50366 | TCONS_00019578-exon-sc0000331-1491911889:48955..50366 | Clytia hemisphaerica | exon |
| TCONS_00019578-exon-sc0000331-1491911889:48445..48666 | TCONS_00019578-exon-sc0000331-1491911889:48445..48666 | Clytia hemisphaerica | exon |
| TCONS_00019578-exon-sc0000331-1491911889:47672..48061 | TCONS_00019578-exon-sc0000331-1491911889:47672..48061 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000331 | supercontig | sc0000331:47672..50366 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008237 | metallopeptidase activity |
| GO:0004222 | metalloendopeptidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0004222 |
metalloendopeptidase activity |
| molecular_function |
GO:0008237 |
metallopeptidase activity |
Blast
BLAST of TCONS_00019578 vs. Swiss-Prot (Human)
Match: ADAM7 (Disintegrin and metalloproteinase domain-containing protein 7 OS=Homo sapiens GN=ADAM7 PE=1 SV=3) HSP 1 Score: 231.876 bits (590), Expect = 2.180e-65 Identity = 156/445 (35.06%), Postives = 239/445 (53.71%), Query Frame = 2
Query: 383 HLEVFVVADNTIYRRFDNDSQKLTDHIHEIFHMVDTMYRPLNFRVTVVGIEIWSDHDQIEFSFTEEPYMNLIRFNSYVQNRSENYMMADHVHLITGKGLFKGGNIGLSHFATVCSPDHATAFTVNLIAPTNFTATVVAHEIGHDLGILHDRPGCQCNEPIENNTCIMSTASKGFEPLPRL-FTDCSYNDMVQYYLSTYKPTCLFNVP-TVTTDVTSACGNNILDAGEECDCGHPYFXXXXXXXXXXXKLTAGSQCYEGGCCHECKIASKGTCCRTMLDSTCDLPDVCDGSSHVC-KDTYKEDRTPCEQG-GMCYKGHCQSHASQCQMIWGADTTENGHSECYNLNKRGDWYGHCGSSPGDYSACADQDVKCGKPYCANTPQDYPVVGWRKGVDVLTVKYNDQHTHRCHVPRITFGRNQTNETMVLDGTPCGTNKMCQNQKCIELS 1705
++E+F+VAD+T+YRR + KL + I + + V+ +Y+ LN VT+VGIEIW+ D+IE E L+RF+ + + + DHV L++GK L+ G+S+ +C P ++T+ +L+ TN A +AH++GH+LG+ HD C C + C+M + +P L F+ CS N Q YL YKPTC+ N+P CGN LD GEECDCG CTNPCC+ +TC L G C EG CC C+I G+ CR D CD P++C G S C KD ++ + PC+ G C+ G C + QC ++ + E+ H CY +N +G+ +G+C + + C ++DV+CGK YC + ++G K + + N T +C I + T+ +V GT CG +C N +C+ +
Sbjct: 200 YVELFIVADDTVYRRNGHPHNKLRNRIWGMVNFVNMIYKTLNIHVTLVGIEIWTHEDKIELYSNIE--TTLLRFSFWQEKILKTRKDFDHVVLLSGKWLYSHVQ-GISYPGGMCLPYYSTSIIKDLLPDTNIIANRMAHQLGHNLGMQHDEFPCTC----PSGKCVMDSDGS----IPALKFSKCSQNQYHQ-YLKDYKPTCMLNIPFPYNFHDFQFCGNKKLDEGEECDCGPAQECTNPCCDAHTCVLKPGFTCAEGECCESCQIKKAGSICRPAKDE-CDFPEMCTGHSPACPKDQFRVNGFPCKNSEGYCFMGKCPTREDQCSELFDDEAIES-HDICYKMNTKGNKFGYCKNKENRFLPCEEKDVRCGKIYCTGG-ELSSLLGEDKTYHLKDPQKNA--TVKCKT--IFLYHDSTDIGLVASGTKCGEGMVCNNGECLNME 625
The following BLAST results are available for this feature:
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