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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019579 ID=TCONS_00019579|Name=TCONS_00019579|organism=Clytia hemisphaerica|type=transcript|length=900bp
GGAACGACTTATCAGCTGCTCTCTTCTTCTCTTCGTCTTCTTGTTTCATT
CGTTCCTTCTCCTCCTGTCGTCTCATCTGCATGACGGAAACACGTCGAAA
TTTCATCTCCTTCTGTTGTTCACTCATACCGTACTCCGATTTCAAATGTG
CGTACTCCGGGTTACTTGATTTACGGACACGACCACTAGACGCGGGAATG
TTCAACGTGTTCGGTTTTCGTTTTTCTCGTTTCGTTAAACCGAGAGCTTC
TCGTTGATCGATAGTTAAGTTTCGTTCTTCGACTAACTCAAATTTCCCat
ctttttcaatcaaaacactGTTTTCTTTCTCCATTTTCCCCATATCTTCA
CTTTCGCTCTCAGTATCATCACTATTATCATTACTTGGTGATTTCCCGAC
AAACGACTGTTGTCGGCTTGATGCCGAAGTTGGACTGGATTCTTCGTCGT
CATGAAAATCGTCATCATATCCATTCCGAGAAGACAAGACAGAAGATTCT
CGTGAAACCGAATTATTCTTCACTTCGGGATCATCATTTCGAATAGTGCT
TCCTCTAGAAAGCGATCGTTGAGATTGTCGTGAATTATTCTCACTTCTTA
ACGAACCAACCGTATTTTGTCGGGAAGCAGTAGCTACCGACGATAGTCCA
GAGGTCGGTCGGGATGACGTTGATTCATCCGACATTGTTGTTCCTTGACG
AGATAAATCTTCACCATCTTGGTCATCTTTTAACGTACTTGCATTACTTT
TTCTACTTATGGAACTTGTAACAGAGGAGGATGTACTCAATGTtgagaaa
tcacgtgacaattCGTCTTCAGTACTTGATTCTCCGGTGGCCATCCTCAC
CACTTTGATAAGCGTCAAACATTGTtcatactttttatttttcaccTAAA Run BLAST on NCBI transcript from alignment at sc0000331:74285..75250- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019579 ID=TCONS_00019579|Name=TCONS_00019579|organism=Clytia hemisphaerica|type=transcript|length=966bp|location=Sequence derived from alignment at sc0000331:74285..75250- (Clytia hemisphaerica)
GGAACGACTTATCAGCTGCTCTCTTCTTCTCTTCGTCTTCTTGTTTCATT
CGTTCCTTCTCCTCCTGTCGTCTCATCTGCATGACGGAAACACGTCGAAA
TTTCATCTCCTTCTGTTGTTCACTCATACCGTACTCCGATTTCAAATGTG
CGTACTCCGGGTTACTTGATTTACGGACACGACCACTAGACGCGGGAATG
TTCAACGTGTTCGGTTTTCGTTTTTCTCGTTTCGTTAAACCGAGAGCTTC
TCGTTGATCGATAGTTAAGTTTCGTTCTTCGACTAACTCAAATTTCCCAT
CTTTTTCAATCAAAACACTGTTTTCTTTCTCCATTTTCCCCATATCTTCA
CTTTCGCTCTCAGTATCATCACTATTATCATTACTTGGTGATTTCCCGAC
AAACGACTGTTGTCGGCTTGATGCCGAAGTTGGACTGGATTCTTCGTCGT
CATGAAAATCGTCATCATATCCATTCCGAGAAGACAAGACAGAAGATTCT
CGTGAAACCGAATTATTCTTCACTTCGGGATCATCATTTCGAATAGTGCT
TCCTCTAGAAAGCGATCGTTGAGATTGTCGTGAATTATTCTCACTTCTTA
ACGAACCAACCGTATTTTGTCGGGAAGCAGTAGCTACCGACGATAGTCCA
GAGGTCGGTCGGGATGACGTTGATTCATCCGACATTGTCGTTCCTTGACG
AGATANCGATAGTCCAGAGGTCGGTCGGGATGACGTTGATTCATCCGACA
TTGTTGTTCCTTGACGAGATAAATCTTCACCATCTTGGTCATCTTTTAAC
GTACTTGCATTACTTTTTCTACTTATGGAACTTGTAACAGAGGAGGATGT
ACTCAATGTTGAGAAATCACGTGACAATTCGTCTTCAGTACTTGATTCTC
CGGTGGCCATCCTCACCACTTTGATAAGCGTCAAACATTGTTCATACTTT
TTATTTTTCACCTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019579-exon-sc0000331-1575043694:74568..75250 | TCONS_00019579-exon-sc0000331-1575043694:74568..75250 | Clytia hemisphaerica | exon |
| TCONS_00019579-exon-sc0000331-1575043694:74285..74501 | TCONS_00019579-exon-sc0000331-1575043694:74285..74501 | Clytia hemisphaerica | exon |
| TCONS_00019579-exon-sc0000331-1510915933:74568..75250 | TCONS_00019579-exon-sc0000331-1510915933:74568..75250 | Clytia hemisphaerica | exon |
| TCONS_00019579-exon-sc0000331-1510915933:74285..74501 | TCONS_00019579-exon-sc0000331-1510915933:74285..74501 | Clytia hemisphaerica | exon |
| TCONS_00019579-exon-sc0000331-1491911889:74568..75250 | TCONS_00019579-exon-sc0000331-1491911889:74568..75250 | Clytia hemisphaerica | exon |
| TCONS_00019579-exon-sc0000331-1491911889:74285..74501 | TCONS_00019579-exon-sc0000331-1491911889:74285..74501 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000331 | supercontig | sc0000331:74285..75250 - |
Blast
The following BLAST results are available for this feature:
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