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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019609 ID=TCONS_00019609|Name=TCONS_00019609|organism=Clytia hemisphaerica|type=transcript|length=742bp
TGTTTCAGCGTGATATTAGGAGACGTTGAATTGATGGTTTGCGGTTCCGT
ATTCGAGCGTACAATGTTCGTTCGGAGAACAGTAGCGGCGTTAGGTAAGG
AGACTGTCATTCCTTGAGTGATAGTAATATTTGGAGCAACAGGGATCAAC
TTAGTATTTACATTTTGGTGAGTGGTGAAAACAGACGAAACGTTTTGTCC
CGTATGATTTAAAGTCACTACCGTTGGTGTATTTACCAAGTGGCTACCAG
CTGATATCAGATCGTTTAAAGAATGACATAAGTTCACGCCCGTGGCGTTC
GTATTCCCAACACCCAACATTTTGCGTTGAGGCTGATTCAAATTGTTAGC
CGTTTTGGTTAAGTCTATATTATTTTCGATTTGGATAGGTGACGTTGAGC
TGGATAAGAATTCATCGATAACTGAAACGTCTAACGGTGATGTTTTGAGG
CGATTCGCTTGTTGCTGTTGACTTATAGAGTTACACTGCTGTAGTAACGT
AGCGTTCTTTAAGTTCGTATTACTGAAAGGATCTACTATATTTATATCTG
ATGAATTACGCCGTTTCGACGCCGTAGTTTCGTTGTTGGTTGACGTTGAA
ATCCCTTGGACTTCATTCAAAGAATAATGACGTTTTAAGTTTGTTTTATT
AGAAGTACGACTATTAGATGTTGtgttgtttttatgtttatgcATGATGC
CGTTCTGTAAAGGGTCTTGAACGATGGATGGCTTTAAAcctg Run BLAST on NCBI transcript from alignment at sc0000332:38930..39726+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019609 ID=TCONS_00019609|Name=TCONS_00019609|organism=Clytia hemisphaerica|type=transcript|length=797bp|location=Sequence derived from alignment at sc0000332:38930..39726+ (Clytia hemisphaerica)
TGTTTCAGCGTGATATTAGGAGACGTTGAATTGATGGTTTGCGGTTCCGT
ATTCGAGCGTACAATGTTCGTTCGGAGAACAGTAGCGGCGTTAGGTAAGG
AGACTGTCATTCCTTGAGTGATAGTAATATTTGGAGCAACAGGGATCAAC
TTAGTATTTACATTTTGGTGAGTGGTGAAAACAGATGAAACGTTTTGTCC
ANAACTTAGTATTTACATTTTGGTGAGTGGTGAAAACAGACGAAACGTTT
TGTCCCGTATGATTTAAAGTCACTACCGTTGGTGTATTTACCAAGTGGCT
ACCAGCTGATATCAGATCGTTTAAAGAATGACATAAGTTCACGCCCGTGG
CGTTCGTATTCCCAACACCCAACATTTTGCGTTGAGGCTGATTCAAATTG
TTAGCCGTTTTGGTTAAGTCTATATTATTTTCGATTTGGATAGGTGACGT
TGAGCTGGATAAGAATTCATCGATAACTGAAACGTCTAACGGTGATGTTT
TGAGGCGATTCGCTTGTTGCTGTTGACTTATAGAGTTACACTGCTGTAGT
AACGTAGCGTTCTTTAAGTTCGTATTACTGAAAGGATCTACTATATTTAT
ATCTGATGAATTACGCCGTTTCGACGCCGTAGTTTCGTTGTTGGTTGACG
TTGAAATCCCTTGGACTTCATTCAAAGAATAATGACGTTTTAAGTTTGTT
TTATTAGAAGTACGACTATTAGATGTTGtgttgtttttatgtttatgcAT
GATGCCGTTCTGTAAAGGGTCTTGAACGATGGATGGCTTTAAAcctg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019609-exon-sc0000332-1491911889:38930..39090 | TCONS_00019609-exon-sc0000332-1491911889:38930..39090 | Clytia hemisphaerica | exon |
| TCONS_00019609-exon-sc0000332-1510915933:38930..39090 | TCONS_00019609-exon-sc0000332-1510915933:38930..39090 | Clytia hemisphaerica | exon |
| TCONS_00019609-exon-sc0000332-1575043694:38930..39090 | TCONS_00019609-exon-sc0000332-1575043694:38930..39090 | Clytia hemisphaerica | exon |
| TCONS_00019609-exon-sc0000332-1491911889:39146..39726 | TCONS_00019609-exon-sc0000332-1491911889:39146..39726 | Clytia hemisphaerica | exon |
| TCONS_00019609-exon-sc0000332-1510915933:39146..39726 | TCONS_00019609-exon-sc0000332-1510915933:39146..39726 | Clytia hemisphaerica | exon |
| TCONS_00019609-exon-sc0000332-1575043694:39146..39726 | TCONS_00019609-exon-sc0000332-1575043694:39146..39726 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000332 | supercontig | sc0000332:38930..39726 + |
Blast
The following BLAST results are available for this feature:
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