TCONS_00019623 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019623
Unique NameTCONS_00019623
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1014

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019623 ID=TCONS_00019623|Name=TCONS_00019623|organism=Clytia hemisphaerica|type=transcript|length=1014bp
AATAGATTGTTAGATAAAAAAAGATGTCAGTGCtagagaaaaaaggaaaa
ggaaagtTGGATGATACTGTTGTATTGAAATGCAACATCACCGGTTTTGT
GAATATTGATGGACATACTGAATTCAAATTAAAAGTTCAAAGAGGATCAA
ATCCAGATAACAGTTGGGAGGTGATGCATCGATATAATGATTTTGCAGCA
CTGAATACACTACTCACGgCAAACCTTGTTGGTATTGAAGTTCCTTTCCC
ACCAAAGAAGGCATTTGGAAATATGGATAGTGCTTTCTTGCAAGAACGCA
GGTTTGGTTTGCAGACTTTCATGGATCTGGTCTTGTCAAACAGTTTGTTT
TCGCAAAATATTGCTGTAAAAAGATTTCTTGACCCTGGAAACTACTCAGA
TAACATTGATCAGATGGCACAACAACAAGCAGCCATGTTCTTTCGATCAG
AACCAAATTGGGAACTACAGGAAAACATGAAAGAAATAGGTTGGAGGGTA
CGCAAACATTATTTTAGCATCAAATCCAAAGATGGGGCAGCAAAAACGAA
ATATTTACTCAGTTGGGTTGAACATGGACCAGATCTGACGTTGGACCACC
AGACCACATTATTAGGGCTTTTACATCAATTAGTTTCACTACAGCATCCA
TTCATTTATCCAGTCACTTACGCATCGTGCACAGAAAAAGGAGCAACTAT
AGTTCGACAATTTCATAATACTGGCTCTTTGAGAGATGTTATATGCAAGG
CAAAACCACATCATCCCAGACTGAAGAAATATGGAAATTTGAGAATTCGA
ATACCTTTGGAATTCAGTAATATCAAGCGAATTGGTCGGCAAGTTCTAGA
AGCactcaaatttttaaaagacaAAAATTGGCCTTATGgtCATTTGCATG
CTGGAAATGTTGTAGTTGATGGAAATAATTGCAGATTGCTGGATGTAGAA
AATGGAATACTGGGCCTGCCCACACTTTATCGATCTTTTATTATGGAGCT
CAAAGCTGTCAAGG
Run BLAST on NCBI

transcript from alignment at sc0000332:8327..17511-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019623 ID=TCONS_00019623|Name=TCONS_00019623|organism=Clytia hemisphaerica|type=transcript|length=9185bp|location=Sequence derived from alignment at sc0000332:8327..17511- (Clytia hemisphaerica)
AATAGATTGTTAGATAAAAAAAGATGTCAGTGCTAGAGAAAAAAGGAAAA GGAAAGTTGGATGATACTGTTGTATTGAAATGCAACATCACCGGTTTTGT AAATATTGATGGACATACTGTAAGTATACAATTTTCTCATAATTAATGTG GCGGCATTTTTTTATATTTGTATGAAGTGTATCCAAATGTATTAATAGCA TAGTAACTTATTTATGCTTTTGAATTTGAAATACAAAAATGAATTTCCTG CATCTAATAATCCAATCACTAATACTATATGTATTTTTTAGGAATTCAAA TTAAAAGTTCAAAGAGGATCAAATCCAGATAACAGTTGGGAGGTGAGCGA GCCTTTGGTTGATATACTTGTCTTTCTAGATGCTTTGACCTTATTTTCGT TGATCTCCTCAGATTGAGTGCAAGCACCATTAACAAAGGACTAGGAAAAG ATTCGTTATTGACTTTTTAAAACGAAGAATAGAGAATTTATTTTCCTCTT TTAGGTGATGCATCGATATAATGATTTTGCAGCACTGAATACACTACTCA CGGTAAAGATTGTTTCAAATATGCTCCTTCCTTAAAATGATAATGTAATA TCCACCTTTTCATAAATTACATCACAAAAAATCATTTGCCTCATATTGAA ACAATTACCATGGTGATTATGTCCCTTGAGACATTAAATGATTTTTTTAT GAATAAAAAGTAGTTTCAACACAATCCACTGGGAGTTGATCACCATGGCA ATAATTTCAAAACAAGGCAAGTGATGTTTGTGACGTATTTTATGAAAAGA TCTATCATGATTTATACAAAATATTTGTATGAAATGACAAAATGAGCTGA CAGAGCTGTACTTTCTTAAATGTTTTTCTTTTGTCAGGCAAACCTTGTTG GTATTGAAGTTCCTTTCCCACCAAAGAAGGCATTTGGAAATATGGATAGT GCTTTCTTGCAAGAACGCAGGTTTGGTTTGCAGGTTAGAGGCAGATCTTT TTATTTCTGTCTGCTCAAGATAACTACAAATTATTGATTAATAAAACTTG CTTTGAGAGCAATGTAGTGTATTTGATGTCAATTTTGCGGGCATAAATGA AAGCTGAATAATGTCAATTTTTAGTTTTGAGAAGTCAAAATAACATTCAC TGTAGGTTTTAATCCATCCCTTTTTGAACATTTGAGTTAAAAACTTTGCA AAAACTGCTCTGTTGATCTGAATTATGAAAATTCTAGATTTTTGTTTGTA AAAGATAAAATACGTTGATAAGAAAATGGTATTACTGTATTATAGGTAAG TTTAAAAAAGATTTAGCATCTAGAATGATTGCTTTTATAAATATTCAAAC ACATTGATACATTCTATGACTCGTCATTGTGCAAAAATAATAAATCTTTT TATTTAGACTTTCATGGATCTGGTCTTGTCAAACAGTTTGTTTTCGCAAA ATATTGCTGTAAAAAGATTTCTTGACCCTGGAAACTACTCAGATAACATT GATCGTAAGTCAAATTTGTTTCCAGTAGATATATCCACATCTTCCAATTT ATGTTGAACTGTNCTCATTTGAATTAGGGCTGTAGGTTTATTGGACCATT TATAGCCTACCATTATCAACCAAATATTTTAAAATATCCACAAGTTTTGA AGAGCCGGCCATCTGAAATATATTCATAACATTAAATTTATTCTAATGAT AATAGATTGCTAGATAAAAAAGATGTCAGTGCTAGAGAAAAAAGGAAAAG GAAAGTTGGATGATACTGTTGTATTGAAATGCAACATCACCGGTTTTGTG AATATTGATGGACATACTGTAAGTATACAATTTTCTCATAATTAATGTGG CGGCATTTTTTTATATTTGTATGAAGTGTATCCAAATGTATTAATAGCAT AGTAACTTATTTATGCTTTTGAATTTGAAATACAAAAATGAATTTCCTGC ATCTAATAATCCAATCACTAATACTATATGTATTTTTTAGGAATTCAAAT TAAAAGTTCAAAGAGGATCAAATCCAGATAACAGTTGGGAGGTGAGCGAG CCTTTGGTTGATATACTTGTCTTTCTAGATGCTTTGACCTTATTTTCGTT GATCTCCTCAGATTGAGTGCAAGCACCATTAACAAAGGACTAGGAAAAGA TTCGTTATTGACTTTTTAAAACGAAGAATAGAGAATTTATTTTCCTCTTT TAGGTGATGCATCGATATAATGATTTTGCAGCACTGAATACACTACTCAC GGTAAAGATTGTTTCAAATATGCTCCTTCCTTATAAAACGATAATGTAAT AGACCTTTTCATAAATTACATCACAAAAAATCATTTGCCTCATATTGAAA CAGTTACCATGGTGATTATGTCCCTTGAGACATTAATTGATTTTTTTATG AATAAAAAGTAGTTTCAACACAATCCACTGGGAGTTGATCACCATGGCAA TAATTTCAAAACAAGGCAAGTGATGTTTGTGACGTATTTTATGAAAAGAT CTATCATGATTTATACAAAATATTTGTATGAAATGACAAAATGAGCTGAC AGATCTGTACTTTCTTAAATGTTTTTCTTTTGTCAGGCAAACCTTGTTGG TATTGAAGTTCCTTTCCCACCAAAGAAGGCATTTGGAAATATGGATAGTG CTTTCTTGCAAGAACGCAGGTTTGGTTTGCAGGTTAGAGGCAGATCTTTT TATTTCTGTCTGCTCAAGATAACTACAAATTATTGATTAATAAAACTTGC TTTGAGAGCAATGTAGTGTATTTGATGTCAATTTTGCGGGCATAAATGAA AGCTGAATAATGTCAATTTTTAGTTTTGAGAAGTCAAAATAACATTCACT GTAGGTTTTAATCCATCCCTTTTTGAACATTTGAGTTAAAAACTTTGCAA AAACTGCTCTGTTGATCTGAATTATGAAAATTCTAGATTTTTGTTTGTAA AAGATAAAATACGTTGATAAGAAAATGGTATTACTGTATTATAGGTAAGT TCAAAAAAGATTTAGCATCTAGAATGATTGCTTTTATAAATATTCAAACA CATTGATACATTCTATGACTCGTCATTGTGCAAAAATAATAAATCTTTTT ATTTAGACTTTCATGGATCTGGTCTTGTCAAACAGTTTGTTTTCGCAAAA TATTGCTGTAAAAAGATTTCTTGACCCTGGAAACTACTCAGATAACATTG ATCGTAAGTCAAATTTGTTTCCAGTAGATATATCCACATCTTCCAATTTA TGTTGAACTGTGAAAAAGAATGCTGCTTTTATTATTTGATATTTTCGACA TGTTTCAGGCTTGTTCCATTCTCACACCCCTGTCTCACAGCCCCGGTGGA ACTTTTTTCTAAGTGGGGATAAAATTCCTATTGAAATCCCAATGGGGATA GAAATTCCTTTGTTTCAAGGTTAAAAAATTCAGTGGCAATGGTTTTGAAG TGCAATTTTTAAACATTGAATTTCGAATGGGGATGAAATAAAAGTTAATT TCCAATTGGGGCTAAAATTCTAAGGTATTTTCCCACTGAGGACGAAACCT TTCTCAATCTTTCCAGTGGGGCTGGGCTGCCAGCAGGTCTGTGACACAGG GGTATATTCTCAAGAATTTGAGTTCCGTTCTCATATGATATTATCTTTTT GACCAGGTTTTTTCCGTTGGTGGTGGTAGTGTATGCTAAAATTTTGATCT AATATAGACATGCTTTTGTTTCTCAATAGAGATGGCACAACAACAAGCAG CCATGTTCTTTCGATCAGAACCAAATTGGGAACTACAGGAAAACATGAAA GAAATAGGTATGCCTTTTAAGTATACGATAAGAGCTGTTGCTAGGTAGCT AAGTGGGTTGTGTGTCCCTTCCTTGGTCATGGCCAGCTCTGTGTATGAGG ATTGTATTGAATTTTCAAATTGTTTCTCTTCTATCAGATCATTCAATAAA TACTTATTAGAAAGACATAATAGATATTATCAAACTGTAATTCTCATTCT TTCTAAGGTTGGAGGGTACGCAAACATTATTTTAGCATCAAATCCAAAGA NCGTTGAAAATTCTCTCAAAAATGCTGACGTCAGCACAAAATATTGCATT TTTGAAGACGTATCGACCAATTCCGGGGGACTAAGTCCACTAAATGNCTA TCAGATCATTCAATAAATACTTATTAGAAAGACATAATAGATATTATCAA ACTGTAATTCTCATTCTTTCTAAGGTTGGAGGGTACGCAAACATTATTTT AGCATCAAATCCAAAGATGGGGCAGCAAAAACGAAATATTTACTCAGTTG GGTAAGTAAATGGTATCTCCCCATAATGGTATTAGTCCGGCGGCGATCCA GGATCACCCTTACAATTAGTAAATATGGGTTTTTATTTTATTTTCCCATC ATATGGTCCCTTGGGACCCCAAAACCAGNNNNNNNNNNNNNNNNNAGCTA AATGAGAACTTCAAAAATCGACTTTCTAAGGACCCCCAGGCTAAAATGAC CCTACCCCCTTCAAGCCCCCATAAAAAAATTTCCCCAGCTTTGCCACATT GGCAAAAACTGGTTTTGGGGTTCCAAAGGACCATATAATGAGAAAATAAA ATAAAAACCCATATTTACTACTTGTAAGGGTTGATGCAAAAAGGCCCTTT TCGCCGCCCGACTATATTGAGTTGAATCCAAATTTCCAGTTTTTTTTGCA ACATAAGCTGTTAAGATACATTTTTTTTCTCCATGAACCCAAACTTCACG ATAAAGCTACGAAATAATCAAACAATCTCCATTGTATTAATGTTTGATTT TCTCAGTGAGTTACGATAGCTTTGTTTTAGCTACAATCAATGGCTTGATC ATTTCACCACTTATAATTCAGGTTGAACATGGACCAGATCTGACGTTGGA CCACCAGACCACATTATTAGGGCTTTTACATCAATTAGTTTCACTACAGG TTTATTTTACTGATTTTTATTCTCTCAAATTTTGTAGTCATTTTATCAGA TTTTGATTATTACAATTATGTACATATCTGAAATCTTATAATTTGATATC AGTCAAAACAGGCAACAGGAATATTTTCCAATTTCTTTCCAGCATCCATT CATTTATCCAGTCACTTACGCATCGTGCACAGAAAAAGGAGCAACTATAG TTCGACAATTTCATAATACTGGCTCTTTGAGAGATGTTATATGCAAGGTA AAAAAAGTCAATTTGTTTGCTATTGAGGATTTCTTGTATCCCTTCTTAGG AATCATTTTTAGATTCATACGATTTGATTCGTAAGACTCGAGGTAAAAAC TTGTGTTGTCAACTGGAATCGACCATATCAAAATTGACTGATATCAAAAT ATGAGTAGAATCATTATCAAACCATTTGTTGTTGTTTGTTAATTGGTCTA TTGAGTTGAACTCCTAATTTGGGGGCTGCCAGCATTTTTGACCAGTACTG GAGAAAGGTTTTTGGTATTCCTTGAAGAAACTACTGGTATTCAGGTATTT TGTACCCTCTGAAGCCTCCATTTAACTTTTTCATTTAAATGTTATCTATC CAGGCAAAACCACATCATCCCAGACTGAAGAAATATGGAAATTTGAGAAT TCGAATACCTTTGGAATTCAGTAATATCAAGCGAATTGGTCGGCAAGTTC TAGAAGCACTCAAATTTTTAAAAGACAAAAATTGGCCTTATGGTATGACC CCCTTTTACATGATTTTACTATAGACGTGATCAAACAATAGCCTGCCTCC CAGTGTTAAACTACATTCTACAATACTGGGTGTGTTTTAAAAAACACTCT TTTTTTAATTTTCTCTGTTTATTTATTATGAATTTTGAATTTTCTGAACA GCCGTTATTCATGGAACTGATTTTAAAAATTGTTTTATACATGAATTACT GTCGATCAGGAATCTAACAATCTCAACACAACGAGTTTGAAATGTTATTT CTAAATCAACATCAGCTTTATGTTATTATTTTTAGGTCATTTGCATGCTG GAAATGTTGTAGTTGATGGAAATAATTGCAGGTGATTTTTCGTTCGAACC AATAGTTTAAAGCAATTTTCACATTATAAGCAAATAGGTTGCCAAAGCTT TAAATTAGCCAATTAAGCCTTTGATCCAATAAGCGTAAATATGGTATAAT ATTAGGGATGTTCAAAGCTAATTTTTCAAAAAACTACCCCTGACCCGAAA GTTGGAGTTGCTTATAAAACAAATGCTTAATGATGATAGATGATAGATAC TTCTTTTAGCTCTTGAATTGATTTCATTTTAAAGTAATGAATGAAAATAC CAGGTCCTATTAAATTTGTAGGAAATGCAGCTAGCCACTATTGACAATTA TGAAAACTGCGAAAGCCAGTTTTTGATTTTTTTTGCTGGTGAAATTCCAT GTTCAAAATTCAAATAACACAGGGATCCCACTCCTCCTAAAATTCCTAAA ATAAGTCAAAACTCCTAAAATCCTCCTAAAATGCAGCAAATTCTCCTAAA TTCCTAAAATCTGAAAACTTTATCAAGCACGGTAGCTGATTTTGTTTGTA TATTTGTATAATCAGACAAGAAACTAAGATTTTTCCTCAATAAAGTCAAA ACAAACTAGGAGCAAGCTACCTGACCTTGAAACAACATGTTTAAAATATA TTTTTGCACTGAAATATTTGAAACAAAATAATGTCAAATTTGTACCGTGG TTTCGTAAGCAAGGCAAACTGTATTCAAAGTACCATAGAAGTGGATGTGT TAGGTATTAGAGCTTAAGTTTTTGTGGATTTGGTACTGTGGCAGAAGGTA TCAGTCAGAGCTAAGTCACTTTTTGATATTTTATTTTGTCTTTGAAATAT TAGTTCAAATCTGTGATGGACGGAACGTCCCGTTATAGCAGGGGGGGTGA AGCAGTTAGTACAAGACATCATGCCTACTAACTGCTTTCTCGGAAGAAGT TAGTAACACCACCACCTTGGTACACTTAGTACAGTTAGTANNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNCAGTTAGTACTAACTGAATTTAGCCTTGAAAAAGGC TTTTGACCTTCATAAATTCAATAAAATCAAATAAAATCAAATTTAATATC TTAAAAATGATTCAATATCCATAGCTTTCAATAGGAAAAAACAACATTTT AGAAAATCAAATTTCTTTTGCAACCAGCAAATTGTTTTTAAGATTTAAAA AAAAAATTTCGAAAATTTGAAAAAAAAATGTACTTCCCAAAAAAATTTTT TGGTAAAATATGGTCTTTTTTTTTTAATTTTCTCACAAAATCCTATTTTT TACACAATTAGTACCAAAATTTGGCAAATTTTTAGCAGGGGACCACCCTT TTTTGCAGTTAGTACATCTGAGTACTAATTGATTTTATCCAATTCATATG GCACACCACCACGGTACTAACCGGCATGATGTCTTGTACTAACTGCTTCA CCCCCCCCTGGTTATAGTTATAACTGAAAATATGTGACGGACAGGACACA ATTTTGTTGTTTTCGAAGCAAAATTTAGTATTCAAAGCTTCTTACAGGAA AAATTAATCAAAATCTTTACAGTTTTCTCCACTATTTGGTCACATCTTGA TGGGAGAGTACTCAAAATACAAAAATACATCCTCAGAACATACAATTTCT TAAATAAATAAGCATCTTGTGCCGAATTCACCTTTGAAAACAAAAAATTA TGTCCCGTCCGTCACACATTTTCAGTTATAACTCAAATTTGGCTCAAGAA AACAGCCTGAAATTTTCAAATCATATACTTACATTATAGAGTAATACTTT TAAATAAAATTGACTAAAATTTAGAAAGCCAAATTTAAAATTGAGTGGAT AAAAGACAAGCATATGAGTGACGGATGGGACGTCCCGTCCGTCACAGATT TTTGCTAATATTTCAAAGACGAAACAAGTATCAAAAATGACTTAGTCCTG ACTGATACCTTCTGCCACAGTACCAAATCCACAAACACTCAAGTTCTAAT ACCTAACACATCTACTTCTATGGCAATTTGAAGACAGTTCAAAACCACGG TACAGATTTGGTGCAATTTACCCCTATGTTTATTGAAGGAGTGCAGACTT TATTCAACAAAGAGAACTCAAATGTTTTAAGGTTTGATGGTTTGCGCCCT CATCTTTGAATTTTTTACTTGAGCATAAGCTTTGTTACAACACAATGCCT TTCCCTGTTAATGAAAAGAAATATGAACGCTGACAACTATTTTCTAACTG CATTACAAAATGTTCTAAATAATCTGCTTTAATGTTTTGCCATTCTATTT CATCCGCTTTAATTCATTTTGCTCTTTTTTAGTAAACAGAATATAAAAGC AGTAAATGTGCCTGATTATTTATATTCAAAATAAGTTGATAGTGTGCTTT AGTTTGTTTTTGAGGCTCAACTATTATGACTAGTTTTATTGTGTTTGTGG ATGGCTTAATTTGCTTAGTACTCATTGGTTTCCAAGTCTATTTTTTTTTG TATCTATTCAATTTTTGGAAGATCTCAAGATGAGTTTTTTGGTAACTAGC CTTCTGTTGAAATATCTATTGTTACTTTGAATAAAATCAGTCTATATTGC TCAGATTACATCTCAAATTTGTCCCTAGTTTTTCTAATTCAAGTTGCCTT TTGTTAATATTTTTGATCTTGTAAGTTAGCAGTAAGTATGACTGGTAATT TAGCCATATTGAGAGAATTTCTTTTAGAACGAACAATACTTTACGTAAAG TAATTTTATTTTTGTTACATTATTTTAGTCTTCCTGTGGGTGATTTTTTC TGATTGCTGACTTCAGGTCGATTTTAGAAATTTATTTCTTAAATTTTCCT AAAATCCTCCTAAAAAATTGAAAATTCTCCTAAAAATCTCCTAAAATTTG GCCAAAGTCCTCCTAAAATTTGTCCTAAAATTAAGATATTCAGGCGTGGG ATCCCTGAATAACATATTTGAGTCAAAAATTTATTTTATTTTTTTCTGCT TGAAGATTGCTGGATGTAGAAAATGGAATACTGGGCCTGCCCACACTTTA TCGATCTTTTATTATGGAGCTCAAAGCTGTCAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011038XLOC_011038Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019623-exon-sc0000332-1575043694:17426..17511TCONS_00019623-exon-sc0000332-1575043694:17426..17511Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:15694..15726TCONS_00019623-exon-sc0000332-1575043694:15694..15726Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:15471..15521TCONS_00019623-exon-sc0000332-1575043694:15471..15521Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:15261..15308TCONS_00019623-exon-sc0000332-1575043694:15261..15308Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:14830..14925TCONS_00019623-exon-sc0000332-1575043694:14830..14925Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:14309..14405TCONS_00019623-exon-sc0000332-1575043694:14309..14405Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:13705..13782TCONS_00019623-exon-sc0000332-1575043694:13705..13782Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:13487..13504TCONS_00019623-exon-sc0000332-1575043694:13487..13504Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:13211..13269TCONS_00019623-exon-sc0000332-1575043694:13211..13269Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:12563..12640TCONS_00019623-exon-sc0000332-1575043694:12563..12640Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:12315..12419TCONS_00019623-exon-sc0000332-1575043694:12315..12419Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:11820..11958TCONS_00019623-exon-sc0000332-1575043694:11820..11958Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:11481..11526TCONS_00019623-exon-sc0000332-1575043694:11481..11526Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1575043694:8327..8406TCONS_00019623-exon-sc0000332-1575043694:8327..8406Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:17426..17511TCONS_00019623-exon-sc0000332-1510915933:17426..17511Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:15694..15726TCONS_00019623-exon-sc0000332-1510915933:15694..15726Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:15471..15521TCONS_00019623-exon-sc0000332-1510915933:15471..15521Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:15261..15308TCONS_00019623-exon-sc0000332-1510915933:15261..15308Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:14830..14925TCONS_00019623-exon-sc0000332-1510915933:14830..14925Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:14309..14405TCONS_00019623-exon-sc0000332-1510915933:14309..14405Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:13705..13782TCONS_00019623-exon-sc0000332-1510915933:13705..13782Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:13487..13504TCONS_00019623-exon-sc0000332-1510915933:13487..13504Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:13211..13269TCONS_00019623-exon-sc0000332-1510915933:13211..13269Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:12563..12640TCONS_00019623-exon-sc0000332-1510915933:12563..12640Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:12315..12419TCONS_00019623-exon-sc0000332-1510915933:12315..12419Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:11820..11958TCONS_00019623-exon-sc0000332-1510915933:11820..11958Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:11481..11526TCONS_00019623-exon-sc0000332-1510915933:11481..11526Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1510915933:8327..8406TCONS_00019623-exon-sc0000332-1510915933:8327..8406Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:17426..17511TCONS_00019623-exon-sc0000332-1491911889:17426..17511Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:15694..15726TCONS_00019623-exon-sc0000332-1491911889:15694..15726Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:15471..15521TCONS_00019623-exon-sc0000332-1491911889:15471..15521Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:15261..15308TCONS_00019623-exon-sc0000332-1491911889:15261..15308Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:14830..14925TCONS_00019623-exon-sc0000332-1491911889:14830..14925Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:14309..14405TCONS_00019623-exon-sc0000332-1491911889:14309..14405Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:13705..13782TCONS_00019623-exon-sc0000332-1491911889:13705..13782Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:13487..13504TCONS_00019623-exon-sc0000332-1491911889:13487..13504Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:13211..13269TCONS_00019623-exon-sc0000332-1491911889:13211..13269Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:12563..12640TCONS_00019623-exon-sc0000332-1491911889:12563..12640Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:12315..12419TCONS_00019623-exon-sc0000332-1491911889:12315..12419Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:11820..11958TCONS_00019623-exon-sc0000332-1491911889:11820..11958Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:11481..11526TCONS_00019623-exon-sc0000332-1491911889:11481..11526Clytia hemisphaericaexon
TCONS_00019623-exon-sc0000332-1491911889:8327..8406TCONS_00019623-exon-sc0000332-1491911889:8327..8406Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000332supercontigsc0000332:8327..17511 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.97358 1.5843 0 0 0.968506 1.10467 6.6733e-09 1.70865 1.81838 0.00141385 3.21245 2.14996 0 0.165307 2.77428 3.77574 1.16455 4.70847 0 3.35814 3.87488 4.98869 0.580359 3.59023 2.87599 6.31306e-09 9.75781 0.609773 3.49588 2.98389
Blast
BLAST of TCONS_00019623 vs. Swiss-Prot (Human)
Match: PXK (PX domain-containing protein kinase-like protein OS=Homo sapiens GN=PXK PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 2.303e-91
Identity = 154/331 (46.53%), Postives = 215/331 (64.95%), Query Frame = 3
Query:   24 MSVLEKKGKGK--LDDTVVLKCNITGFVNIDGHTEFKLKVQRGSNPDNSWEVMHRYNDFXXXXXXXXXXXVGIEVPFPPKKAFGNMDSAFLQERRFGLQTFMDLVLSNSLFSQNIAVKRFLDPGNYSDNIDXXXXXXXXXFFRSEPNWELQENMKEIGWRVRKHYFSIKSKDGAAKTKYLLSWVEHGPDXXXXXXXXXXXXXXXXXXXXXPFIYPVTYASCTEKGATIVRQFHNTGSLRDVICKAKPHHPRLKKYGNLRIRIPLEFSNIKRIGRQVLEALKFLKDKNWPYGHLHAGNVVVDGNNCRLLDVENGILGLPTLYRSFIMELKAV 1010
            M+ +EK   GK  LDDTV L   I    ++  HTE+ ++VQRG + +NSW+++ RY+DF  LN  L     G+ +P PPKK  GNMD  F+ ER+ GLQ +++++ +N + S    VK+FLDP NYS N  ++A QQ +MFFRSEP WE+ E +K+IGWR+RK YF +K K+   K + +LSW + GPD  L  +     +      L  P+IY VT+A+  E  A ++R F+  G+L+D+I KAKP  P LKKY N +    LE   IK  GRQ+LE LKFL DK +PYGHLHA NV++DG+ CRLLD+EN +LGLP+ YRS+  + + +
Sbjct:    1 MAFMEKPPAGKVLLDDTVPLTAAIEASQSLQSHTEYIIRVQRGISVENSWQIVRRYSDFDLLNNSLQI--AGLSLPLPPKKLIGNMDREFIAERQKGLQNYLNVITTNHILSNCELVKKFLDPNNYSANYTEIALQQVSMFFRSEPKWEVVEPLKDIGWRIRKKYFLMKIKN-QPKERLVLSWADLGPDKYLSDKDFQCLIKLLPSCLH-PYIYRVTFATANESSALLIRMFNEKGTLKDLIYKAKPKDPFLKKYCNPKKIQGLELQQIKTYGRQILEVLKFLHDKGFPYGHLHASNVMLDGDTCRLLDLENSLLGLPSFYRSYFSQFRKI 327          
The following BLAST results are available for this feature:
BLAST of TCONS_00019623 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PXK2.303e-9146.53PX domain-containing protein kinase-like protein O... [more]
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