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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019657 ID=TCONS_00019657|Name=TCONS_00019657|organism=Clytia hemisphaerica|type=transcript|length=1523bp
TGCTAAGAAACTCATTTACGCTTATGCTTCGATaaaatttctaataaaaa
atggaTGATGAAATATCACTTAAAAAACTTATAGGGTTATCATTAATGAC
GTGATCTGAATAGctcttgcaaaaaaaaaacgctCAATACTCTTTATTAG
AGATTTGTCCTAAGATTACTAGTAAGAATTTGTTTGAATTTGTTCTATTC
TTAGCTAGGATATCCTCTTTATTACTAAAACtggtttttcaagttttaga
tGTTTATACTAATGAGTTATATTGATCAAATTTCGAAATTGCTGATTGTC
ACTTTTTAAGTTATTCTGGTAAAACAAGACGAGAATAAAAAGTATTTAAG
GCCGCTGAATTTGTTAATATCTCACTCATACTTCAAAGTCTAAAGTCAAC
CATCATCGACCAAGCGAGTCAAAACCGGGCAGTTCAAAAAGGTGACAGTT
AGGTTTGTAAAGCTCTTCGAACGTTTAAAAGTAGTGAACAAGATATCTAT
TTTATCGATACCTATTCTCAAACGATAATGGCACCACACGAATCAACAAG
AATCGAATCAATTCGACCAATCACTATGGAATCGATTTTATTCGGGGATG
AACTTAACACTGATAGCTTGAAAACGAAAATCGAGGACTACGATTTTTAT
CGATATCTCGTTTCTGATTTTCACGGAATTGCTCGGTGTAAAATTATCAC
TAAATCAGCGTACCCGCGCATGTCAAAAAAGGGGCCTGGAATTGCTTGGA
GGACACCTGTTCTATCGTTCGACAGTTTCAACAATTATGATCTGACACGG
GTTGATGGTAAACGATGCACGGACGCGCGGTTGATCGTTGAACAAAGCGT
CCCCCGTCCGCTACAGTGGGCAGGAAAAGGACACTCAGTTGCAGGTGTTA
TATGTGAAACATGGTGGGGAGTTGATGAACAACCACAAATGGCATGTCCA
CGCTATATGGCCCGACGTCTATGCGAGAAACTTGAATCAGAATTCAAGCT
ACGCATTCTTCACGCTTCAGAAATGGAGTTCACCATCTTCAAAGAAAACA
TGGAACCACTTTTTGAAGAAGGTGGTTTCTACATTTCACAAGAGTTCGCC
AACCATGAAGAAGAGCTTCTCTCTTTATCAACGATGTGCGAGAAAGCAGG
TATCCCAATTGAAACACTTCAAACAGAATATGGACCAGGGCAAATCGAAC
TTGTATTAAAACCAGAATTTGGTGTCGAAGGAGCTGACaatgaatttttg
tttaaaaatgctgccAAAGAAATGCTACAAAAACCAGGACAATATTCGAG
ATGTACTTTCATGTCTAAACCAATCATAGATAAAGTTGgaaacGGGAGCC
ATTACAACCATTCATTATGGAAAGTTAAAGAAAACGGAGACGTCNTTCGA
ACTAAATCGTTGGTTATCTCAACTTGAAAGTCgcataaaatactctctgt
aaaTTTTCGGTCTcttaaaatcgaattagagagagtcaaatGCGTAGCTT
TTtcttcgaaatagtttcaatgA Run BLAST on NCBI transcript from alignment at sc0000333:275684..277676+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019657 ID=TCONS_00019657|Name=TCONS_00019657|organism=Clytia hemisphaerica|type=transcript|length=1993bp|location=Sequence derived from alignment at sc0000333:275684..277676+ (Clytia hemisphaerica)
TGCTAAGAAACTCATTTACGCTTATGCTTCGATaaaatttctaataaaaa
atggaTGATGAAATATCACTTAAAAAACTTATAGGGTTATCATTAATGAC
GTGATCTGAATAGctcttgcaaaaaaaaaacgctCAATACTCTTTATTAG
AGATTTGTCCTAAGATTACTAGTAAGAATTTGTTTGAATTTGTTCTATTC
TTAGCTAGGATATCCTCTTTATTACTAAAACtggtttttcaagttttaga
tGTTTATACTAATGAGTTATATTGATCAAATTTCGAAATTGCTGATTGTC
ACTTTTTAAGTTATTCTGGTAAAACAAGACGAGAATAAAAAGTATTTAAG
GCCGCTGAATTTGTTAATATCTCACTCATACTTCAAAGTCTAAAGTCAAC
CATCATCGACCAAGCGAGTCAAAACCGGGCAGTTCAAAAAGGTGACAGTT
AGGTTTGTAAAGCTCTTCGAACGTTTAAAAGTAGTGAACAAGATATCTAT
TTTATCGATACCTATTCTCAAACGATAATGGCACCACACGAATCAACAAG
AATCGAATCAATTCGACCAATCACTATGGAATCGATTTTATTCGGGGATG
AACTTAACACTGATAGCTTGAAAACGAAAATCGAGGACTACGATTTTTAT
CGATATCTCGTTTCTGATTTTCACGGAATTGCTCGGTGTAAAATTATCAC
TAAATCAGCGTACCCGCGCATGTCAAAAAAGGGGCCTGGAATTGCTTGGA
GGACACCTGTTCTATCGTTCGACAGTTTCAACAATTATGATCTGACACGG
GTTGATGGTAAACGATGCACGGACGCGCGGTTGATCGTTGAACAAAGCGT
CCCCCGTCCGCTACAGTGGGCAGGAAAAGGACACTCAGTTGCAGGTGTTA
TATGTGAAACATGGTGGGGAGTTGATGAACAACCACAAATGGCATGTCCA
CGCTATATGGCCCGACGTCTATGCGAGAAACTTGAATCAGAATTCAAGCT
ACGCATTCTTCACGCTTCAGAAATGGAGTTCACCATCTTCAAAGAAAACA
TGGAACCACTTTTTGAAGAAGGTGGTTTCTACATTTCACAAGAGTTCGCC
AACCATGAAGAAGAGCTTCTCTCTTTATCAACGATGTGCGAGAAAGCAGG
TATCCCAATTGAAACACTTCAAACAGAATATGGACCAGGGCAAATCGAAC
TTGTATTAAAACCAGAATTTGGTGTCGAAGGAGCTGACaatgaatttttg
tttaaaaatgctgccAAAGAAATGCTACAAAAACCAGGACAATATTCGAG
ATGTACTTTCATGTCTAAACCAATCATAGATAAAGTTGGTAAGTTAcatc
ttatttttctttaactttATGTAATCGGAATAGTAtccaagctggcacac
aacgttgtttcaacgtttatctaacgttcacaacgtctatataacgttag
atgaacgttgaaagaacgttctTTGCCAGCTGGGTACAATCCTTTATCGG
GGAATTTTTATTCATCTCGCCAATTTTTCTAATTTGGCTACGCCGTTGGG
AAAACAAAAACGAGCAGTCTTTTTTACAAAGTCAACGAAAACAGGAAAAA
CTTGGTGAGATTTCACTAGGATTTCAACTAGGAAATAAGAACCTGGAAAT
AAGAACCTTACTTTCTTTACTTTTCTCGATTAACTATTCCGATTGGGTTA
CGTTTTCTAGAAAACGGGAATAAGAACTAGTCGACCAAGGACAGAGAATC
CCACTCTACTTTCcttacttttatttattaacTATTCCGATcgggtttgg
ttttataggaaacGGGAGCCATTACAACCATTCATTATGGAAAGTTAAAG
AAAACGGAGACGTCNTTCGAACTAAATCGTTGGTTATCTCAACTTGAAAG
TCgcataaaatactctctgtaaaTTTTCGGTCTcttaaaatcgaattaga
gagagtcaaatGCGTAGCTTTTtcttcgaaatagtttcaatgA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019657-exon-sc0000333-1491911889:275684..277021 | TCONS_00019657-exon-sc0000333-1491911889:275684..277021 | Clytia hemisphaerica | exon |
| TCONS_00019657-exon-sc0000333-1510915933:275684..277021 | TCONS_00019657-exon-sc0000333-1510915933:275684..277021 | Clytia hemisphaerica | exon |
| TCONS_00019657-exon-sc0000333-1575043694:275684..277021 | TCONS_00019657-exon-sc0000333-1575043694:275684..277021 | Clytia hemisphaerica | exon |
| TCONS_00019657-exon-sc0000333-1491911889:277492..277676 | TCONS_00019657-exon-sc0000333-1491911889:277492..277676 | Clytia hemisphaerica | exon |
| TCONS_00019657-exon-sc0000333-1510915933:277492..277676 | TCONS_00019657-exon-sc0000333-1510915933:277492..277676 | Clytia hemisphaerica | exon |
| TCONS_00019657-exon-sc0000333-1575043694:277492..277676 | TCONS_00019657-exon-sc0000333-1575043694:277492..277676 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000333 | supercontig | sc0000333:275684..277676 + |
Blast
The following BLAST results are available for this feature:
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