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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019664 ID=TCONS_00019664|Name=TCONS_00019664|organism=Clytia hemisphaerica|type=transcript|length=630bp
CTGACAACCAACCAGAACTAAAGCAATGATAAAAAGATACTTCTTTCATA
AGATTTAACattgattttttataaatacATCTCAGCTTACGTAAGTTTTA
AAGTTGACTTATCATTTGGGAAAACTTTCGAGGAGAAGACACACATACAA
GAATTGAAACTTCAAGACAGGGCTGTCACCTAAACAAATATGATTCGAGT
GTTGTCAATCATTTGTGTGGTTGCTATGGTTACCGTAAACCAATCAAATG
CTGATCCAGACCCTTATATGAGTCACTATGGTAACTCTATGTATCACACA
TGCCGGAACAAAGCTAACGCAGAATTTAGTAAATGTTTCAACAAAGCATG
GAAAGAAAGAACAAGTGATTCTCaatttcatctggattttgcgaGTTGTG
GGACCGAAAAGAAAACAAGAATTTCAGAATGTAGAAAATTTCGCCACTAA
ATAAAGGAACCTGGCATATTCAATAAACAATCGCTATGATATGATTTTAT
TTCCAAAGACAGTTTTGTTTTCGAATTatgtaccgggtgcgccacaaaaa
agtttctctctttaaaactaattttctcgaaatctaaaaatgttttaaaa
accgttcctatttcattggaaagaagaaag Run BLAST on NCBI transcript from alignment at sc0000333:52805..54119- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019664 ID=TCONS_00019664|Name=TCONS_00019664|organism=Clytia hemisphaerica|type=transcript|length=1315bp|location=Sequence derived from alignment at sc0000333:52805..54119- (Clytia hemisphaerica)
CTGACAACCAACCAGAACTAAAGCAATGATAAAAAGATACTTCTTTCATA
AGATTTAACATTGATTTTTTATAAATACATCTCAGCTTACGTAAGTTTTA
AAGTTGACTTATCATTTGGGAAAACTTTCGAGGAGAAGACACACATACAA
GAATTGAAACTTCAAGACAGGTAAAGCTTTAAATTAGTCTCCAAAGCGTG
ATTTTGCGGTTTGTACAAAAAAGTACCTTATCTAGGGTAAATAATAGCCG
GGGGCTGGTCCTGGAGTAGGGGTTAGAAAATGTGAAAAATAAACAAACGG
AAAGGTGGTGGTCATCTGCTTCATTACTCTTAGGTGCCAAATAAACGCCG
CCCCCCCCCGCTTGTTAATTTTTACAAGAATATTTTCAGTTGGCAAAAAG
AAGTCCCCTTATTTTGCTCCAAAAAGCCTGATTTTAGCCTATATTTACCT
TATTTTTGGAGGTACAATTTCCAACCCCCCGGCAATTAGGTCCCCCGTTT
ATTAAAATTTCGAAAACTTTCCAACCCCCCGTTTATTTGGCACCTAAGAG
TAGCAGGTGAGAGTAATAAACGAGGCGGTACTAACTGCCAGACTATCCAC
AAAGTGGATCGGCAAAGAATTGTACCCAGTGGTAAAAGATATCCTCGAAA
ATTTCACCCCTATTGAATAATCCTTATCCTCTTATATTGACCATCCCGTT
CAAGGTTTAGAGCTATAAGTAATCATAATATAAAGCCTAACCCGACCTGT
ATTCTCCCTTGGAATCTAGCTCTTCCCTTAAGTCCCTACGACTAAATTAT
CTTCTGGGACAGGGATGCGCTAAGGAGAATAATGACTTTTACTTTATACT
TGTAGGGCTGTCACCTAAACAAATATGATTCGAGTGTTGTCAATCATTTG
TGTGGTTGCTATGGTTACCGTAAACCAATCAAATGCTGATCCAGACCCTT
ATATGAGTCACTATGGTAACTCTATGTATCACACATGCCGGAACAAAGCT
AACGCAGAATTTAGTAAATGTTTCAACAAAGCATGGAAAGAAAGAACAAG
TGATTCTCAATTTCATCTGGATTTTGCGAGTTGTGGGACCGAAAAGAAAA
CAAGAATTTCAGAATGTAGAAAATTTCGCCACTAAATAAAGGAACCTGGC
ATATTCAATAAACAATCGCTATGATATGATTTTATTTCCAAAGACAGTTT
TGTTTTCGAATTATGTACCGGGTGCGCCACAAAAAAGTTTCTCTCTTTAA
AACTAATTTTCTCGAAATCTAAAAATGTTTTAAAAACCGTTCCTATTTCA
TTGGAAAGAAGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019664-exon-sc0000333-1575043694:53950..54119 | TCONS_00019664-exon-sc0000333-1575043694:53950..54119 | Clytia hemisphaerica | exon |
| TCONS_00019664-exon-sc0000333-1575043694:52805..53264 | TCONS_00019664-exon-sc0000333-1575043694:52805..53264 | Clytia hemisphaerica | exon |
| TCONS_00019664-exon-sc0000333-1510915933:53950..54119 | TCONS_00019664-exon-sc0000333-1510915933:53950..54119 | Clytia hemisphaerica | exon |
| TCONS_00019664-exon-sc0000333-1510915933:52805..53264 | TCONS_00019664-exon-sc0000333-1510915933:52805..53264 | Clytia hemisphaerica | exon |
| TCONS_00019664-exon-sc0000333-1491911889:53950..54119 | TCONS_00019664-exon-sc0000333-1491911889:53950..54119 | Clytia hemisphaerica | exon |
| TCONS_00019664-exon-sc0000333-1491911889:52805..53264 | TCONS_00019664-exon-sc0000333-1491911889:52805..53264 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000333 | supercontig | sc0000333:52805..54119 - |
Blast
The following BLAST results are available for this feature:
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