TCONS_00019781 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00019781
Unique Name	TCONS_00019781
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3813

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000336:178473..196614+

transcript sequence

>TCONS_00019781 ID=TCONS_00019781|Name=TCONS_00019781|organism=Clytia hemisphaerica|type=transcript|length=3813bp
AGACAATTCGAAATATGTAAATGGAAATAAAAACGTGATTTTTTTAACGT
GGACGAAGatcatttcaataaaaatgcCTTTTGGAGGAGTGGATAGTATT
TTTCTTTGCGGGGCTAAAATAGCACGTGACTTCGACGAGCGAGACATCAC
CGCAAGACGTTCTGCACCATCATCAACAAAATCGTCCCGCAAACACAGTA
AAGCTTCATCGATCACTTCTGAAACACCTTTGACACGTTCACAACGCAAA
TCAAGCAATACATCACTGAACGACATTTCACCGCCAGAGAGACCATCATC
AACAAAAGCTTCACAATTAAGAGGAGTTGTTCGAAAACTTTCTTCACAGA
GCGATGAACCGCGCCTTGGCAGCACACCATCGAGTCTAGCGGCCAGTCGT
GAAAGCATTATCGAAGAATGGGAACGATTTGAAAGTTTGGAGAAGAAACA
AGAAATCCAAGCCTTGAAAAATCACATCGCTGAAATTAAGAAAGAAAGCG
ATAGGACTACAgAATTATTGATCAACAAGAAGAACCAATACGAAGAATCG
AAAAGTGAATCTTCCGCCAAAGATGAACAAATCCAACTGCTTCAAAAACA
AATCAACGAACTCAACCAAGTTATTGAAACATTACGAGCCGAGAAAGATG
AACCGAAAGAGAAAGTGTTTATTTCTAAGGAAACCGATTTGGATGTTGGA
GTAGAACCCCAACatgaaattttagcgaaaaaTGAAAGTTTGGTATATCG
TGTCTTAGTCAAAGAATCTACATCTAAAGGAACTGATACTGTAGATCTTC
AAAATATAAACATTGAATGTGTGAACCACAAGGTCTCAATGGAGTTTGTC
TCTCGAGAAACTGACACTTTCGATCTTAACGAAGCTGTTTTGGTACAAGA
ACAATTTGGAAAGCTAGAGGAAGAAGTGTTAGTAACGCGTGATGAGATTA
ATGAGGTCTGTGGTCAGGTTTGTGCTGAGgaagatttgaaaatattacaa
aaggaaTACGATCAACTTTCCTCAAAACATAAAGACACGACGGATAGATA
TGAAAAGCAAATTGAACTTTCCAATACGTTAGAAGGAGAAAATAAAGATC
TAGCCAACGATTTACGGACAACGCGGCAACATTTGGAAGATATGACTTCA
AAACTGAATAACGTTCAACAATTAgtaaatgtaaaaaataaagaaatctt
CGAGCTTTCTTCTTCGGTCAATCTACTACAAAAGGAACTAGACTCTACAA
AAGATTTAGCAGCAGAACAACAGGCTAATGTACGAAACAATAATCTTACC
GAATTTGAAAAACTGCAAAATAAGATGAGTCTTGTGGAGGATGAACTGAT
GCAAAGTCGACAACAAAAGGAATTATGTGAAGATAAAATTGAACAACTTA
TGAATGAAAACGAACTGCTAAAATATGAGAAAATTTCTCTTGAGAAAGTT
ACAGAGGAAGTGTCACTCCAGTCTGCCTATAATCCGCTAGAACCATCAAT
GGGTGAGAAAAGCGATTCGGATTTAGAGCTAGGGCTATTACGACAGCAGC
TTGAAGAACAGCATCTTGAAATGACTAGCCTTGAAACCAATCTTAAATCA
GATGTCAGCGAGTTACGACAAAATGCGGAAAATCAGGAACAATTGATTGC
TAAGCTAGAACATGAAAATCAAAAGCTTTATAAAGAGAAATATGAACTGA
ATGAAAATATCTTGGTGTTGCAAGATCGCATCAACACAATATCTAAGGAA
CACGAGAATCTTTTATCTAATGAAAACGAACATCGTACTTCAATCGAGGA
GGATTTAAACGATTCGATGAGCTTCTCCGAACACGATTCAAAGATCGAAC
AACTCTTATCGATTCATAAGAACGAGATGGATATGCTTCAAGAAAAACTG
AATGAAACCGAAAAAGATCATGAAAGCGCATTACGTGAAAAAGACGATTT
GATTTCATGTAAAGAGCAACAAATCTTGTCTTTGCAAATTGATCTTGACG
AGAAATCAAGGGATTTGAAAAGCCTGAATACAGAGTGTTCCCGTTTGCGC
GCGCTCAAAGATAAAGAGCAAGCGACGAGTGACGAACAAGAATCGTATCT
GCTTCAGGAAATCGAACACGTGCAAcacgaatgtaaacaaaagcTACACA
CTATGGAGGAGGATAAGGATCGTCTAACCGCTCTCCTTCAAAAACAATAC
GATGAAAAACTTATCGAAATGGAAGTCgaatttgaacaaaataaatctat
tgAAATTGAAAACGTTCGAGAAGACTTACAAAATGAGATTGACTCTTTAC
TTGCACAAAGAACGGAACTGATGTCAGTTCTTAGTAAAATGGAATCATTG
CTTATTGCAAGAACACCGACGAGCACGACTTCATCGTCCGGTAGAAACGG
GTTCCATTTTGATTTCCCCGATAATGGAAAACTGGAAcggaaatcgaaag
tggaacaTTCGAACGATGATATGCTACTTATGATTTCGAATCTTGAAACT
CAAATGAATGGAACAGATTTAAATAAAACATGGCCATTACTTGAGAACCA
CACTTCTTCGAATCGGAAAGCGCCGCTTTCTCCGAACGGTGTCAAAGCAC
AGTTCGAAAGAGCACGTAGTGACATTTCGTTACAGTTACGAGAACTTGAT
GACATCATGATGAGTGATTCACGTTTACCGAGTTTAAGCGCGTCTGAAAC
GCGTTCACATGCGTCTGAACCGCGTATCGGATCAAGCTTAAATGCTTCTT
TTGATGAACTTTCGTTTGACCACGATGATAGTATTTCCGCTTCTTCACCG
CTTACAAAACAAACGCCCCTTCATTCACCCACTACCACCCACACGCCATC
ACCCTCATTCCGTGATTCAGGGATTTCAACGATAGAACTATCAAACCGTA
ACACGTTTTACGAGAAACAGTTACGAGACTTGTTACGTTCTTTCTTAAGA
TTCGAACTACAATGTCATTTAATTGCGACTGATTTCTCTAACGAAAAATG
GTTTTTAGACTTGCAGAAATGGAAAGATCGCGCCAATAAACGCTTGAAAA
GGCTCGAACAAAGATATTTGAAATATGATAATACTCTTTCGAAATCGATC
ACTTATCGACCGACTGATGAAGAGGTCAGGGAAATTATTGCTGACgtcaa
caaaaaatatgatCGGTTCAAACAGcatgaaatttaaagtttttttcaga
atatatttttaatttagTTCGAACTGTTTGAAAAGTATTTGCATGGGGTC
TCTTCCTTTATATGATTTCATTAATTTTATAGACCATTTCATGCTGCGAA
ATGAATGATGGTTAAACAGGACTGATATCGGTGTTTATTCTTTTCAGAAT
GGTATCTACAAAATAACCATTTGTATAATGCTAAAAGTCCCCTAACGGCA
AACAGCGCTGCATCATAAATACTCAGGGAAAATCAGATCTAGAGCTCTCT
AGTGCCACTGTCTCAGTGCCTCGGTATAAACGTTTTATTCTGGGTCTGTT
TTTAGAGGATTtcaaatagacgatatcggctttccgaattctccccgaat
gattacccatgatgcattgcgcaaaaaattcacggacgatatttACTTTC
CGTGANTCCTGAAAAGAGAAGAGAAACCTCCAGTGCTAGTGCCACTGTCT
CAGTGCCTCGGTATAAACGTTTTATTCTGTGTTCTtccaaaacctttaaa
ataagCAGTTAAGTTTAAATATTCTATGCTCCCTTTACCAATTTGTTGGT
AATGGAATAATACGATTTGTatatttattgtaaatattttgaccttATTA
GGAAAGAGTGCTG

Run BLAST on NCBI

transcript from alignment at sc0000336:178473..196614+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00019781 ID=TCONS_00019781|Name=TCONS_00019781|organism=Clytia hemisphaerica|type=transcript|length=18142bp|location=Sequence derived from alignment at sc0000336:178473..196614+ (Clytia hemisphaerica)
AGACAATTCGAAATATGTAAATGGAAATAAAAACGTGATTTTTTTAACGT
GGACGAAGatcatttcaataaaaatgcCTTTTGGAGGAGTGGATAGTATT
TTTCTTTGCGGGTAAGTTCTTAAATGCTGACATCAACAAAAAAATCTCCC
TCACaactttaaatgtttttaatatcatCACTTGTAGAAGTATCTATTAA
AAATGCcaagtttttataattttgttggtccaaaaattataaaatctgCA
AAATATATCAATCCGATTGAGGATAAACTCTAGGCTACCGGACAGTCACT
GGATCGATACGAAATTAGATGAAGTTAAATCAGTTCAAAAAGGCGGAAAT
ATTGCCTAATGTGTTATCTCTTAAACGAATTCCacttaaaaactttagaa
atacgACTTACTACTGTACtgtcttcaaaattttctcacaaAGATTTGAC
ATTCGTTTCATTCATTTGTATTTTGGCCTCaaacattgcaattttttgaa
tGGATGGATACCAGCATCCTGTATAAGCTACACGAAACATttttttgcaa
caaaaaaattaacatatttttaaaagtagtttccgcaaaagtaaaatttt
cgattttttttttatatcctttTCCCGTTTTTCATACAGTCTTGCTAATG
TGTAATCTCGGCGGGACGCCTTTTGACGGATTAAATCTAATGAAAAGAAc
gaaacaaaatcattttttaaagatagCGGTTTCTGATTTCGCATTTCATT
TTCGTGTTGGTTTTCAACTTGTTCGTAACTTGTTAACCCCTTGGAGAGAG
CAATTgaaattatatatattttcaacTGTGTAGAAAATCGTtaacattat
tttttttatatatctgGGAtaagaatttttcataatttgttCGAGTGATA
ATTTTTCGAGCAATTAACAAAATTTACTTATTGAGCTTTATATTTTTGTT
GACATGCCAGCATCACGTAAGAAAGTGAGGCAATTTTTTGCCTGTGGGTA
AGTCTTTTTTTCTCACATACCTGGTAAATCGATTACATTTTactttttcc
cctttttctcaTTTAACTGGAATGAAATTACGTGGAACTGTCATCctgtt
ttttttaaactaaattgTAACTAAAAGATAACCTAGGTGNAgcttttttc
ctaaattttcacagcttaatccatacatgaatggaactattttcaaaaga
gattggttttcaaaatcttgattaagacgttgttaaatcaaaattgtaat
tttgaaaatttctaaattttcagtttggactttgcaatatcgaaaatctt
gaaatatttcataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNTAAATGGAAATAAAAACGTGAATTTTTTAAC
GTGGACGAAGatcatttcaataaaaatgcCTTTTGGAGGAGTGGATAGTA
TTTTTCTTTGCGGGTAAGTTCTTAAATGCTGACATCAACAAAAATTCATA
TTATTATCACCTGTAGAGTTTCTACAAAAAATGCCAAGACTTCTGCTGTA
ATTTTGATGGTACAAAAGTTATAGATTTGGcaaaatacacccctgtatag
AACAAATGAAGATTAACTCTAGGCTACCGTACAGGATACGAAATTAGATG
AagttaaataatttcaaaaaggtGGAAATGTTTCCTAATGTGTTATCTCT
TATACGAATTCCacttaaaaattttagaaatacgACCTATGTACTACTGT
ACTGCCTTCCACATTTTCTCACAACGATTTGATGCTCGTTTCATTCATTT
GTATTTTGGCCTCAAACATTGTAATCTTTGGAATGGATGGATACCTGTAT
AAGCTATATCCTGTATAAGCTAcatgaaacatttttttgcaacaaaaaaa
ttaacatatttttaaaagtagtttccgcaaaagtaaaattttcgatattt
tttttatatcctTTTCCCGTTTTTCATACAGTCTTGCTAATGTGTAATCT
CGGCGGGACGCCTTTTGACGGATTAAATCTAATGAAAAGAAcgaaacaaa
atcattttttaaagatagCGGTTTCTGATTTCGCATTTCATTTTCGTGTT
GGTTTTCAACTTGTTCGTAACTTGTTAACCCCTTGGAGAGAGCAATTgaa
attatatatattttcaacTGTGTAGAAAATCGttaacattatttttttca
tatatctGGGAtaagaatttttcataatttgttCGAGTGATAATTTTTCG
AGCAATTAACAAAATTTACTTATTGAGCTTTATATTTTTGTTGACATGCC
AGCATCACGTAAGAAAGTGAGGCAATTTTTTGCCTGTGGGTAAGTCTTTT
TTTCTCACATACCTGGTAAATCGATTACATTTTactttttcccctttttc
tcaTTTAACTGGAATGAAATTACGTGGAACTGTCATCctgttttttttaa
actaaattgTAACTAAAAGATAACCTAggtgaattttttcaaaaactggt
ATCCTGGGTCCTTGAAGTCTTTGGAATTAAATCCTAAAAAGGAGATATTC
ATTATACCAGACTGTTGAGTTTCACTACCTTGTATTATAAACATGATCAT
ATAGTTTTGGAGGAGTTTTTTACCAGAGGAAAGTACCGTCATGTATGTAA
AGGAATTTTTTtaactacagtatatggcccccaaaacggagacggccccc
aaaacggaggttttcattaaaatgaagaatttgacttgtagatttatcag
aattaaacgatttttgtttattttgaaagaatgatggttatacttaaaaa
tgagcatgtttttgctggtttNgatcataaattttacatccatcgggtcg
taaatttaagggaaaacacaaatatgttcatagtttttccccctattacc
actgggcttaaaaaatttgattttaactacacctccgttttgggggcccc
aaacctgcattttgacaaccaggggtatactgtaaaaattttatcaaata
aatttatgtgaaaattttgaaaaagaacttacAGGAAATAAAgaagagat
gttaaaggttttcatgcagcaaaaatttttgtaaaatctcttttcctctc
gatttgagagaaatttcaaatttgatcgccgttttgggggccacatactg
tagagTATATCCAGCCACGATTGAAAACTACCTAAGTTCATCAAGTAAAT
TAAAAACTTGTCTGCGTGGTAAATATTGCACGATTAAGTTCTTTTATACA
ATCACAGTACTAAACTTTCCAGTCATCGAAATCGGATTATGATCTGATTC
ATATTAAATCGATTCGACCTTCATCGagaaataaaatctaatacttTTTT
TGACACTAATCTTTTTACATGATTATTATAGGGCTCTTTTTtcattaaac
attttttaagtGAAATATCAGCAGTGTGATACATCAGATCATTTTACCAA
GTAATGAGAAATCTTAACAACCGTCGGTATTTTTGCCTCATGTTAAGATA
GCATAGGCTGCGCACATCTCTGAAATTCATTTCGATATAGGGGGtacgta
tcgtgtataaaattcccatcCGAGAGTCACCCCAAATTTTGGTCATTTCA
TTTCTATATAAGACATATATgactttttcgttttttgagtAAAGTAAAGA
CACACAGAAAGTGTAACGTTCATTCAGCCTGTTCGTTAAAATATACCCCT
CAAAATGCATGCAGCCCAACGATGCCGCTTTTTTAGACGACCGGAACGGC
GATttcactacctcggccgctggtctacaTGCACCTGTACCACATTTTCC
CTCTATGTACAGAATACAATGTATATCACTTGTTCAACATAAATATTTGC
ATCACGTTATTTGACTTAGGTTCTCAATCCAATTTTCCGTTCAgctttct
catcaaaaaatacCTTAGTAGGAGTTTAACTGTTGTGAGTAGCGTGATTA
TAACGTAGCttataacttgaaaaaaatctatCTAATTTCAACAGTTCCAG
GTCTCCATAGCtattatcaaaaatcaaaaaacatatTGATTTTCATTCTC
CATTTTTAGGGCTAAAATAGCACGTGACTTCGACGAGCGAGACATCACCG
CAAGACGTTCTGCACCATCATCAACAAAATCGTCCCGCAAACACAGTAAA
GCTTCATCGATCACTTCTGAAACACCTTTGACACGTTCACAACGCAAATC
AAGCAATACATCACTGAACGACATTTCACCGCCAGAGAGACCATCATCAA
CAAAAGCTTCACAATTAAGAGGAGTTGTTCGAAAACTTTCTTCACAGGTA
TAAATTAAATAcctttatcatttttaatttatgcaataCTAGTAAATTGG
CcattaaaagtaatttttaggCAGCGCAGGGAAGGAAATACCGATGTTAT
TTTCTTAGCTAAATATCAATTGGGATAGAAAATTAGGGCAAAAAGGCGAT
TTTAGGTATTATTAAGGCTaaatagtctagcaagctagacgactaattca
gacatacagtatgtggcccccaaaacggcgatcaaatttgaaatttctct
caaatctagaggaaaagagattttacaaaaatttttgttgcatgaaaacc
tttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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acatatttgtgttttcccttaaatttacgacccaatggatgtaaaattta
tgatttttatgaaatatttcaagattttcgatattgcaaagtccaaactt
aaaaataagaaattttcaaaatgacaattttgatttaacaccgtcttaat
taagtttttgaaaacaaatctcttttgaaaatagttccattcatgtatgg
aataagctgtgaaaattttagaaaaaaagcttcactgaaactgaaaatat
taagctttaaagatatttttctcctatattttgcaaaaaatgacagaata
tgccgtttttgctgattcagcgaaaaaatttatatataatgttaattttt
tgttataaaagtAGTATGTATATGATAGTTCTACTCCAGCATGCTCAAAG
TGAgtgactcaatgtgtgaaaaacgactcaatgtgtgaaaaatgactcaa
tgtgtgaaaaacgactcaatgtgtgaaaaacgactcaatgtgtgaaaaac
aacTCAATGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNGTCTTTTCGCAATCGTCACATTCATA
CATCGTCGCCCTTGGTTTTAAACATTATGAAGAAATGGAATCTTTTCTTG
CCAATTTATAGGCCAAATGCAAGAGGAATCTGATGTAGGGTTTCTCTTTA
GGATCTTGGATTCttgttcttcaattgaatacgctcgtgtcttttttttc
ttttctttacaatcGATTTTGGGACTAAGCTAGCATGATCTTAATTTACA
TTTCCTAGTCTATTTTATTAATCATTTTGGGACTATcgcctaatctttgt
ttggggttacctaatccctattaaagattacctaatccctctttgggatt
acctaatctaaGGGAATCCTTTTTGAGATCACCTAATCcatgtttaagat
tacctaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNAGtcatttttcacacattgagtcgtttttcacacattg
agtcacTCACTTTGAGCATGCTGGAGTAGAACTATCATATACATACTact
tataaactattaactcagggtgaaggaatagaattccaagattttttgct
ttttctcatatttagaattttcggttttgtcaatgctgattcaagggctc
caaaatactggttgaccttcaagatgctatatcttttacccagcctctaa
agtcacagatgtatttgcattttctgaacggcattaggtgtagaaaNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAGGAGCTAGaatgagttatatgcaatttttatctaattt
tggtgttaaaatatttcttttagacGCAAAtgtgttattttgaatctgtc
tcaaaccatcaaaaacatgctcattttttagtataaccatcattctttta
aaataaacaaaaatcgtttaattctgataaatctacaagtcagaatcttc
attttaatgaaaacctccgttttgggggccgtcNaaatcgtttaattctg
ataaatctacaagtcagaatcttcattttaatgaaaacgtCCGTTTTGGG
GgtcgtctccgttttgggggccatatactgtagtagAAATAacgcaaaaa
gtaatggaggtagcaattttagtcgtctagaaatcttctccaaacaaaag
aaaagtgtcaatattacaattataatttttacccactcaaaaaaattctt
gaaaaaagatGTGTGTGGATTTTTGTGTTATAAGTTTTCcattttgagtt
gattttgttgtgaGAGTTTGtcgttgcttgataaattgttttctcgctac
gcaagtttctgcgtagctagccgggtaTTTaaaaggctggaacaccggat
tcttccagtcgtttatacaactttattattagtattagtattattagtat
tacacgcattataaacgactcaaGTCTAAGGCTAAAAGGATAATTTAGGC
AAGATTTAGGGCAATaaattatcctaaatattctTAACACCATTCTTTGG
CTAGAGTCAAATTCAAACTAGACTCGTAATACATACGTCTAAAgccataa
aatggcattttagTGAAAGTATTGAGCTGTTGATGCTCtgaaatgacatt
cttaggttTAGTAGTCAAATCCATGGTGgtggtattcttagcatattctt
aattttttggccaatttcattatggacattcttataaatataTTCTTATG
AATAGAGCGTGTATTGGGCAAATTATTTAACGTAACAGATTCCCTATGTA
CAAGGAATAATATTACAAGTTTAACTTTAATGTATTTCATTACGGTCCAG
CATATCTTTTTTGTTCATTACAGAGCGATGAACCGCGCCTTGGCAGCACA
CCATCGAGTCTAGCGGCCAGTCGTGAAAGCATTATCGAAGAATGGGAACG
ATTTGAAAGTTTGGAGAAGAAACAAGAAATCCAAGCCTTGAAAAATCACA
TCGCTGAAATTAAGAAAGAAAGCGATAGGACTACAGTATGTTTTTTAGCT
TAGCTTTCTGATACCGTTGTTTAGTATGATTGCAACTGTATGTGCCCGAT
TTTTATTTGTCTCCTTTAGTCTAACATTAAAACTGATCAACATCAAATTA
TATCAAAATTGTCTGCCTATCCAAAGTGTCTGTCTTTTGCGAGTACTCAA
GTAAGACGGGTGTATGTTGTCATAATAGAGAAACTACTCGAACCCAGCTT
TTTATGCGAgcgaaccattgagtttaaagcccgaagggctagagttcaat
ctctaatctttctcagacaagaaaaagtgaagcctaaaAAAAtgcgacag
attgaatctaacaattcttttgtttacgattaatattttttttcgaaatt
tagcggtaaattttagtttcaatctgtcatttgtgtaaaaaccaggcgag
tcgctcaaggccgcgcaactttggtaggatttgttggcttcaaaccCTAC
CAAGCAGATtaacttctagcccttcgggcttatacttcattggagCGAAC
ACTAAATAGAAAGCTGACGttttaattttgattatttcaggAATTATTGA
TCAACAAGAAGAACCAATACGAAGAATCGAAAAGTGAATCTTCCGCCAAA
GATGAACAAATCCAACTGCTTCAAAAACAAATCAACGAACTCAACCAAGT
TATTGAAACATTACGAGCCGAGAAAGATGAACCGAAAGAGAAAGTGTTTA
TTTCTAAGGAAACCGATTTGGATGTTGGAGTAGAACCCCAACatgaaatt
ttagcgaaaaaTGAAAGTTTGGTATATCGTGTCTTAGTCAAAGAATCTAC
ATCTAAAGGAACTGATACTGTAGATCTTCAAAATATAAACATTGAATGTG
TGAACCACAAGGTCTCAATGGAGTTTGTCTCTCGAGAAACTGACACTTTC
GATCTTAACGAAGCTGTTTTGGTACAAGAACAATTTGGAAAGCTAGAGGA
AGAAGTGTTAGTAACGCGTGATGAGATTAATGAGGTCTGTGGTCAGGTTT
GTGCTGAGgaagatttgaaaatattacaaaaggaaTACGATCAACTTTCC
TCAAAACATAAAGACACGACGGATAGATATGAAAAGCAAATTGAACTTTC
CAATACGTTAGAAGGAGAAAATAAAGATCTAGCCAACGATTTACGGACAA
CGCGGCAACATTTGGAAGATATGACTTCAAAACTGAATAACGTTCAACAA
TTAgtaaatgtaaaaaataaagaaatcttCGAGCTTTCTTCTTCGGTCAA
TCTACTACAAAAGGAACTAGACTCTACAAAAGATTTAGCAGCAGAACAAC
AGGCTAATGTACGAAACAATAATCTTACCGAATTTGAAAAACTGCAAAAT
AAGATGAGTCTTGTGGAGGATGAACTGATGCAAAGTCGACAACAAAAGGA
ATTATGTGAAGATAAAATTGAACAACTTATGAATGAAAACGAACTGCTAA
AATATGAGAAAATTTCTCTTGAGAAAGTTACAGAGGAAGTGTCACTCCAG
TCTGCCTATAATCCGCTAGAACCATCAATGGGTGAGAAAAGCGATTCGGA
TTTAGAGCTAGGGCTATTACGACAGCAGCTTGAAGAACAGCATCTTGAAA
TGACTAGCCTTGAAACCAATCTTAAATCAGATGTCAGCGAGTTACGACAA
AATGCGGAAAATCAGGAACAATTGATTGCTAAGCTAGAACATGAAAATCA
AAAGCTTTATAAAGAGAAATATGAACTGAATGAAAATATCTTGGTGTTGC
AAGATCGCATCAACACAATATCTAAGGAACACGAGAATCTTTTATCTAAT
GAAAACGAACATCGTACTTCAATCGAGGAGGATTTAAACGATTCGATGAG
CTTCTCCGAACACGATTCAAAGATCGAACAACTCTTATCGATTCATAAGA
ACGAGATGGATATGCTTCAAGAAAAACTGAATGAAACCGAAAAAGATCAT
GAAAGCGCATTACGTGAAAAAGACGATTTGATTTCATGTAAAGAGCAACA
AATCTTGTCTTTGCAAATTGATCTTGACGAGAAATCAAGGGATTTGAAAA
GCCTGAATACAGAGTGTTCCCGTTTGCGCGCGCTCAAAGATAAAGAGCAA
GCGACGAGTGACGAACAAGAATCGTATCTGCTTCAGGAAATCGAACACGT
GCAAcacgaatgtaaacaaaagcTACACACTATGGAGGAGGATAAGGATC
GTCTAACCGCTCTCCTTCAAAAACAATACGATGAAAAACTTATCGAAATG
GAAGTCgaatttgaacaaaataaatctattgAAATTGAAAACGTTCGAGA
AGACTTACAAAATGAGATTGACTCTTTACTTGCACAAAGAACGGAACTGA
TGTCAGTTCTTAGTAAAATGGAATCATTGCTTATTGCAAGAACACCGACG
AGCACGACTTCATCGTCCGGTAGAAACGGGTTCCATTTTGATTTCCCCGA
TAATGGAAAACTGGAAcggaaatcgaaagtggaacaTTCGAACGATGATA
TGCTACTTATGATTTCGAATCTTGAAACTCAAATGAATGGAACAGATTTA
AATAAAACATGGCCATTACTTGAGAACCACACTTCTTCGAATCGGAAAGC
GCCGCTTTCTCCGAACGGTGTCAAAGCACAGTTCGAAAGAGCACGTAGTG
ACATTTCGTTACAGTTACGAGAACTTGATGACATCATGATGAGTGATTCA
CGTTTACCGAGTTTAAGCGCGTCTGAAACGCGTTCACATGCGTCTGAACC
GCGTATCGGATCAAGCTTAAATGCTTCTTTTGATGAACTTTCGTTTGACC
ACGATGATAGTATTTCCGCTTCTTCACCGCTTACAAAACAAACGCCCCTT
CATTCACCCACTACCACCCACACGCCATCACCCTCATTCCGTGATTCAGG
GATTTCAACGATAGAACTATCAAACCGTAACACGTTTTACGAGAAACAGT
TACGAGACTTGTTACGTTCTTTCTTAAGATTCGAACTACAATGTCATTTA
ATTGCGACTGATTTCTCTAACGAAAAATGGTTTTTAGACTTGCAGAAATG
GAAAGATCGCGCCAATAAACGCTTGAAAAGGCTCGAACAAAGATATTTGA
AATATGATAATACTCTTTCGAAATCGATCACTTATCGACCGACTGATGAA
GAGGTCAGGGAAATTATTGCTGACgtcaacaaaaaatatgatCGGTTCAA
ACAGcatgaaatttaaagtttttttcagaatatatttttaatttagTTCG
AACTGTTTGAAAAGTATTTGCATGGGGTCTCTTCCTTTATATGATTTCAT
TAATTTTATAGACCATTTCATGCTGCGAAATGAATGATGGTTAAACAGGA
CTGATATCGGTGTTTATTCTTTTCAGAATGGTATCTACAAAATAACCATT
TGTATAATGCTAAAAGTCCCCTAACGGCAAACAGCGCTGCATCATAAATA
CTCAGGGAAAATCAGATCTAGAGCTCTCTAGTGCCACTGTCTCAGTGCCT
CGGTATAAACGTTTTATTCTGGGTCTGTTTTTAGAGGATTtcaaatagac
gatatcggctttccgaattctccccgaatgattacccatgatgcattgcg
caaaaaattcacggacgatatttACTTTCCGTGANTCCTGAAAAGAGAAG
AGAAACCTCCAGTGCTAGTGCCACTGTCTCAGTGCCTCGGTATAAACGTT
TTATTCTGTGTTCTtccaaaacctttaaaataagCAGTTAAGTTTAAATA
TTCTATGCTCCCTTTACCAATTTGTTGGTAATGGAATAATACGATTTGTa
tatttattgtaaatattttgaccttATTAGGAAAGAGTGCTG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_011125	XLOC_011125	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00019781-exon-sc0000336-1491911889:178473..178583	TCONS_00019781-exon-sc0000336-1491911889:178473..178583	Clytia hemisphaerica	exon
TCONS_00019781-exon-sc0000336-1510915933:178473..178583	TCONS_00019781-exon-sc0000336-1510915933:178473..178583	Clytia hemisphaerica	exon
TCONS_00019781-exon-sc0000336-1575043694:178473..178583	TCONS_00019781-exon-sc0000336-1575043694:178473..178583	Clytia hemisphaerica	exon
TCONS_00019781-exon-sc0000336-1491911889:182632..182869	TCONS_00019781-exon-sc0000336-1491911889:182632..182869	Clytia hemisphaerica	exon
TCONS_00019781-exon-sc0000336-1510915933:182632..182869	TCONS_00019781-exon-sc0000336-1510915933:182632..182869	Clytia hemisphaerica	exon
TCONS_00019781-exon-sc0000336-1575043694:182632..182869	TCONS_00019781-exon-sc0000336-1575043694:182632..182869	Clytia hemisphaerica	exon
TCONS_00019781-exon-sc0000336-1491911889:192596..192757	TCONS_00019781-exon-sc0000336-1491911889:192596..192757	Clytia hemisphaerica	exon
TCONS_00019781-exon-sc0000336-1510915933:192596..192757	TCONS_00019781-exon-sc0000336-1510915933:192596..192757	Clytia hemisphaerica	exon
TCONS_00019781-exon-sc0000336-1575043694:192596..192757	TCONS_00019781-exon-sc0000336-1575043694:192596..192757	Clytia hemisphaerica	exon
TCONS_00019781-exon-sc0000336-1491911889:193313..196614	TCONS_00019781-exon-sc0000336-1491911889:193313..196614	Clytia hemisphaerica	exon
TCONS_00019781-exon-sc0000336-1510915933:193313..196614	TCONS_00019781-exon-sc0000336-1510915933:193313..196614	Clytia hemisphaerica	exon
TCONS_00019781-exon-sc0000336-1575043694:193313..196614	TCONS_00019781-exon-sc0000336-1575043694:193313..196614	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000336	supercontig	sc0000336:178473..196614 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.37375	0	0	0	3.40982	0.0795566	3.98364	13.81	1.84491	5.34695	0.0238393	0.722455	5.27133	2.60168	3.27075	2.91048	3.42399	8.62372	1.67585	2.82092	2.24546	1.22903e-06	0.000710321	2.83123	1.68186	0.425962	17.6328	23.7584	0.00168528	0.0127422

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00019781 vs. Swiss-Prot (Human)

BLAST of TCONS_00019781 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00019781 (transcript) - C. hemisphaerica