TCONS_00019784 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019784
Unique NameTCONS_00019784
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4049

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019784 ID=TCONS_00019784|Name=TCONS_00019784|organism=Clytia hemisphaerica|type=transcript|length=4049bp
TGTAATCTCGGCGGGACGCCTTTTGACGGATTAAATCTAATGAAAAGAAc
gaaacaaaatcattttttaaagatagCGGTTTCTGATTTCGCATTTCATT
TTCGTGTTGGTTTTCAACTTGTTCGTAACTTGTTAACCCCTTGGAGAGAG
CAATTgaaattatatatattttcaacTGTGTAGAAAATCGttaacattat
ttttttcatatatctGGGAtaagaatttttcataatttgttCGAGTGATA
ATTTTTCGAGCAATTAACAAAATTTACTTATTGAGCTTTATATTTTTGTT
GACATGCCAGCATCACGTAAGAAAGTGAGGCAATTTTTTGCCTGTGGGGC
TAAAATAGCACGTGACTTCGACGAGCGAGACATCACCGCAAGACGTTCTG
CACCATCATCAACAAAATCGTCCCGCAAACACAGTAAAGCTTCATCGATC
ACTTCTGAAACACCTTTGACACGTTCACAACGCAAATCAAGCAATACATC
ACTGAACGACATTTCACCGCCAGAGAGACCATCATCAACAAAAGCTTCAC
AATTAAGAGGAGTTGTTCGAAAACTTTCTTCACAGAGCGATGAACCGCGC
CTTGGCAGCACACCATCGAGTCTAGCGGCCAGTCGTGAAAGCATTATCGA
AGAATGGGAACGATTTGAAAGTTTGGAGAAGAAACAAGAAATCCAAGCCT
TGAAAAATCACATCGCTGAAATTAAGAAAGAAAGCGATAGGACTACAgAA
TTATTGATCAACAAGAAGAACCAATACGAAGAATCGAAAAGTGAATCTTC
CGCCAAAGATGAACAAATCCAACTGCTTCAAAAACAAATCAACGAACTCA
ACCAAGTTATTGAAACATTACGAGCCGAGAAAGATGAACCGAAAGAGAAA
GTGTTTATTTCTAAGGAAACCGATTTGGATGTTGGAGTAGAACCCCAACa
tgaaattttagcgaaaaaTGAAAGTTTGGTATATCGTGTCTTAGTCAAAG
AATCTACATCTAAAGGAACTGATACTGTAGATCTTCAAAATATAAACATT
GAATGTGTGAACCACAAGGTCTCAATGGAGTTTGTCTCTCGAGAAACTGA
CACTTTCGATCTTAACGAAGCTGTTTTGGTACAAGAACAATTTGGAAAGC
TAGAGGAAGAAGTGTTAGTAACGCGTGATGAGATTAATGAGGTCTGTGGT
CAGGTTTGTGCTGAGgaagatttgaaaatattacaaaaggaaTACGATCA
ACTTTCCTCAAAACATAAAGACACGACGGATAGATATGAAAAGCAAATTG
AACTTTCCAATACGTTAGAAGGAGAAAATAAAGATCTAGCCAACGATTTA
CGGACAACGCGGCAACATTTGGAAGATATGACTTCAAAACTGAATAACGT
TCAACAATTAgtaaatgtaaaaaataaagaaatcttCGAGCTTTCTTCTT
CGGTCAATCTACTACAAAAGGAACTAGACTCTACAAAAGATTTAGCAGCA
GAACAACAGGCTAATGTACGAAACAATAATCTTACCGAATTTGAAAAACT
GCAAAATAAGATGAGTCTTGTGGAGGATGAACTGATGCAAAGTCGACAAC
AAAAGGAATTATGTGAAGATAAAATTGAACAACTTATGAATGAAAACGAA
CTGCTAAAATATGAGAAAATTTCTCTTGAGAAAGTTACAGAGGAAGTGTC
ACTCCAGTCTGCCTATAATCCGCTAGAACCATCAATGGGTGAGAAAAGCG
ATTCGGATTTAGAGCTAGGGCTATTACGACAGCAGCTTGAAGAACAGCAT
CTTGAAATGACTAGCCTTGAAACCAATCTTAAATCAGATGTCAGCGAGTT
ACGACAAAATGCGGAAAATCAGGAACAATTGATTGCTAAGCTAGAACATG
AAAATCAAAAGCTTTATAAAGAGAAATATGAACTGAATGAAAATATCTTG
GTGTTGCAAGATCGCATCAACACAATATCTAAGGAACACGAGAATCTTTT
ATCTAATGAAAACGAACATCGTACTTCAATCGAGGAGGATTTAAACGATT
CGATGAGCTTCTCCGAACACGATTCAAAGATCGAACAACTCTTATCGATT
CATAAGAACGAGATGGATATGCTTCAAGAAAAACTGAATGAAACCGAAAA
AGATCATGAAAGCGCATTACGTGAAAAAGACGATTTGATTTCATGTAAAG
AGCAACAAATCTTGTCTTTGCAAATTGATCTTGACGAGAAATCAAGGGAT
TTGAAAAGCCTGAATACAGAGTGTTCCCGTTTGCGCGCGCTCAAAGATAA
AGAGCAAGCGACGAGTGACGAACAAGAATCGTATCTGCTTCAGGAAATCG
AACACGTGCAAcacgaatgtaaacaaaagcTACACACTATGGAGGAGGAT
AAGGATCGTCTAACCGCTCTCCTTCAAAAACAATACGATGAAAAACTTAT
CGAAATGGAAGTCgaatttgaacaaaataaatctattgAAATTGAAAACG
TTCGAGAAGACTTACAAAATGAGATTGACTCTTTACTTGCACAAAGAACG
GAACTGATGTCAGTTCTTAGTAAAATGGAATCATTGCTTATTGCAAGAAC
ACCGACGAGCACGACTTCATCGTCCGGTAGAAACGGGTTCCATTTTGATT
TCCCCGATAATGGAAAACTGGAAcggaaatcgaaagtggaacaTTCGAAC
GATGATATGCTACTTATGATTTCGAATCTTGAAACTCAAATGAATGGAAC
AGATTTAAATAAAACATGGCCATTACTTGAGAACCACACTTCTTCGAATC
GGAAAGCGCCGCTTTCTCCGAACGGTGTCAAAGCACAGTTCGAAAGAGCA
CGTAGTGACATTTCGTTACAGTTACGAGAACTTGATGACATCATGATGAG
TGATTCACGTTTACCGAGTTTAAGCGCGTCTGAAACGCGTTCACATGCGT
CTGAACCGCGTATCGGATCAAGCTTAAATGCTTCTTTTGATGAACTTTCG
TTTGACCACGATGATAGTATTTCCGCTTCTTCACCGCTTACAAAACAAAC
GCCCCTTCATTCACCCACTACCACCCACACGCCATCACCCTCATTCCGTG
ATTCAGGGATTTCAACGATAGAACTATCAAACCGTAACACGTTTTACGAG
AAACAGTTACGAGACTTGTTACGTTCTTTCTTAAGATTCGAACTACAATG
TCATTTAATTGCGACTGATTTCTCTAACGAAAAATGGTTTTTAGACTTGC
AGAAATGGAAAGATCGCGCCAATAAACGCTTGAAAAGGCTCGAACAAAGA
TATTTGAAATATGATAATACTCTTTCGAAATCGATCACTTATCGACCGAC
TGATGAAGAGGTCAGGGAAATTATTGCTGACgtcaacaaaaaatatgatC
GGTTCAAACAGcatgaaatttaaagtttttttcagaatatatttttaatt
tagTTCGAACTGTTTGAAAAGTATTTGCATGGGGTCTCTTCCTTTATATG
ATTTCATTAATTTTATAGACCATTTCATGCTGCGAAATGAATGATGGTTA
AACAGGACTGATATCGGTGTTTATTCTTTTCAGAATGGTATCTACAAAAT
AACCATTTGTATAATGCTAAAAGTCCCCTAACGGCAAACAGCGCTGCATC
ATAAATACTCAGGGAAAATCAGATCTAGAGCTCTCTAGTGCCACTGTCTC
AGTGCCTCGGTATAAACGTTTTATTCTGGGTCTGTTTTTAGAGGATTtca
aatagacgatatcggctttccgaattctccccgaatgattacccatgatg
cattgcgcaaaaaattcacggacgatatttACTTTCCGTGANTCCTGAAA
AGAGAAGAGAAACCTCCAGTGCTAGTGCCACTGTCTCAGTGCCTCGGTAT
AAACGTTTTATTCTGTGTTCTtccaaaacctttaaaataagCAGTTAAGT
TTAAATATTCTATGCTCCCTTTACCAATTTGTTGGTAATGGAATAATACG
ATTTGTatatttattgtaaatattttgaccttATTAGGAAAGAGTGCTG
Run BLAST on NCBI

transcript from alignment at sc0000336:180565..196614+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019784 ID=TCONS_00019784|Name=TCONS_00019784|organism=Clytia hemisphaerica|type=transcript|length=16050bp|location=Sequence derived from alignment at sc0000336:180565..196614+ (Clytia hemisphaerica)
TGTAATCTCGGCGGGACGCCTTTTGACGGATTAAATCTAATGAAAAGAAc
gaaacaaaatcattttttaaagatagCGGTTTCTGATTTCGCATTTCATT
TTCGTGTTGGTTTTCAACTTGTTCGTAACTTGTTAACCCCTTGGAGAGAG
CAATTgaaattatatatattttcaacTGTGTAGAAAATCGttaacattat
ttttttcatatatctGGGAtaagaatttttcataatttgttCGAGTGATA
ATTTTTCGAGCAATTAACAAAATTTACTTATTGAGCTTTATATTTTTGTT
GACATGCCAGCATCACGTAAGAAAGTGAGGCAATTTTTTGCCTGTGGGTA
AGTCTTTTTTTCTCACATACCTGGTAAATCGATTACATTTTactttttcc
cctttttctcaTTTAACTGGAATGAAATTACGTGGAACTGTCATCctgtt
ttttttaaactaaattgTAACTAAAAGATAACCTAggtgaattttttcaa
aaactggtATCCTGGGTCCTTGAAGTCTTTGGAATTAAATCCTAAAAAGG
AGATATTCATTATACCAGACTGTTGAGTTTCACTACCTTGTATTATAAAC
ATGATCATATAGTTTTGGAGGAGTTTTTTACCAGAGGAAAGTACCGTCAT
GTATGTAAAGGAATTTTTTtaactacagtatatggcccccaaaacggaga
cggcccccaaaacggaggttttcattaaaatgaagaatttgacttgtaga
tttatcagaattaaacgatttttgtttattttgaaagaatgatggttata
cttaaaaatgagcatgtttttgctggtttNgatcataaattttacatcca
tcgggtcgtaaatttaagggaaaacacaaatatgttcatagtttttcccc
ctattaccactgggcttaaaaaatttgattttaactacacctccgttttg
ggggccccaaacctgcattttgacaaccaggggtatactgtaaaaatttt
atcaaataaatttatgtgaaaattttgaaaaagaacttacAGGAAATAAA
gaagagatgttaaaggttttcatgcagcaaaaatttttgtaaaatctctt
ttcctctcgatttgagagaaatttcaaatttgatcgccgttttgggggcc
acatactgtagagTATATCCAGCCACGATTGAAAACTACCTAAGTTCATC
AAGTAAATTAAAAACTTGTCTGCGTGGTAAATATTGCACGATTAAGTTCT
TTTATACAATCACAGTACTAAACTTTCCAGTCATCGAAATCGGATTATGA
TCTGATTCATATTAAATCGATTCGACCTTCATCGagaaataaaatctaat
acttTTTTTGACACTAATCTTTTTACATGATTATTATAGGGCTCTTTTTt
cattaaacattttttaagtGAAATATCAGCAGTGTGATACATCAGATCAT
TTTACCAAGTAATGAGAAATCTTAACAACCGTCGGTATTTTTGCCTCATG
TTAAGATAGCATAGGCTGCGCACATCTCTGAAATTCATTTCGATATAGGG
GGtacgtatcgtgtataaaattcccatcCGAGAGTCACCCCAAATTTTGG
TCATTTCATTTCTATATAAGACATATATgactttttcgttttttgagtAA
AGTAAAGACACACAGAAAGTGTAACGTTCATTCAGCCTGTTCGTTAAAAT
ATACCCCTCAAAATGCATGCAGCCCAACGATGCCGCTTTTTTAGACGACC
GGAACGGCGATttcactacctcggccgctggtctacaTGCACCTGTACCA
CATTTTCCCTCTATGTACAGAATACAATGTATATCACTTGTTCAACATAA
ATATTTGCATCACGTTATTTGACTTAGGTTCTCAATCCAATTTTCCGTTC
AgctttctcatcaaaaaatacCTTAGTAGGAGTTTAACTGTTGTGAGTAG
CGTGATTATAACGTAGCttataacttgaaaaaaatctatCTAATTTCAAC
AGTTCCAGGTCTCCATAGCtattatcaaaaatcaaaaaacatatTGATTT
TCATTCTCCATTTTTAGGGCTAAAATAGCACGTGACTTCGACGAGCGAGA
CATCACCGCAAGACGTTCTGCACCATCATCAACAAAATCGTCCCGCAAAC
ACAGTAAAGCTTCATCGATCACTTCTGAAACACCTTTGACACGTTCACAA
CGCAAATCAAGCAATACATCACTGAACGACATTTCACCGCCAGAGAGACC
ATCATCAACAAAAGCTTCACAATTAAGAGGAGTTGTTCGAAAACTTTCTT
CACAGGTATAAATTAAATAcctttatcatttttaatttatgcaataCTAG
TAAATTGGCcattaaaagtaatttttaggCAGCGCAGGGAAGGAAATACC
GATGTTATTTTCTTAGCTAAATATCAATTGGGATAGAAAATTAGGGCAAA
AAGGCGATTTTAGGTATTATTAAGGCTaaatagtctagcaagctagacga
ctaattcagacatacagtatgtggcccccaaaacggcgatcaaatttgaa
atttctctcaaatctagaggaaaagagattttacaaaaatttttgttgca
tgaaaacctttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNtgaacatatttgtgttttcccttaaatttacgacccaatggatgt
aaaatttatgatttttatgaaatatttcaagattttcgatattgcaaagt
ccaaacttaaaaataagaaattttcaaaatgacaattttgatttaacacc
gtcttaattaagtttttgaaaacaaatctcttttgaaaatagttccattc
atgtatggaataagctgtgaaaattttagaaaaaaagcttcactgaaact
gaaaatattaagctttaaagatatttttctcctatattttgcaaaaaatg
acagaatatgccgtttttgctgattcagcgaaaaaatttatatataatgt
taattttttgttataaaagtAGTATGTATATGATAGTTCTACTCCAGCAT
GCTCAAAGTGAgtgactcaatgtgtgaaaaacgactcaatgtgtgaaaaa
tgactcaatgtgtgaaaaacgactcaatgtgtgaaaaacgactcaatgtg
tgaaaaacaacTCAATGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTTTTCGCAATCGTCA
CATTCATACATCGTCGCCCTTGGTTTTAAACATTATGAAGAAATGGAATC
TTTTCTTGCCAATTTATAGGCCAAATGCAAGAGGAATCTGATGTAGGGTT
TCTCTTTAGGATCTTGGATTCttgttcttcaattgaatacgctcgtgtct
tttttttcttttctttacaatcGATTTTGGGACTAAGCTAGCATGATCTT
AATTTACATTTCCTAGTCTATTTTATTAATCATTTTGGGACTATcgccta
atctttgtttggggttacctaatccctattaaagattacctaatccctct
ttgggattacctaatctaaGGGAATCCTTTTTGAGATCACCTAATCcatg
tttaagattacctaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAGtcatttttcacacattgagtcgtttttc
acacattgagtcacTCACTTTGAGCATGCTGGAGTAGAACTATCATATAC
ATACTacttataaactattaactcagggtgaaggaatagaattccaagat
tttttgctttttctcatatttagaattttcggttttgtcaatgctgattc
aagggctccaaaatactggttgaccttcaagatgctatatcttttaccca
gcctctaaagtcacagatgtatttgcattttctgaacggcattaggtgta
gaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAGGAGCTAGaatgagttatatgcaattttta
tctaattttggtgttaaaatatttcttttagacGCAAAtgtgttattttg
aatctgtctcaaaccatcaaaaacatgctcattttttagtataaccatca
ttcttttaaaataaacaaaaatcgtttaattctgataaatctacaagtca
gaatcttcattttaatgaaaacctccgttttgggggccgtcNaaatcgtt
taattctgataaatctacaagtcagaatcttcattttaatgaaaacgtCC
GTTTTGGGGgtcgtctccgttttgggggccatatactgtagtagAAATAa
cgcaaaaagtaatggaggtagcaattttagtcgtctagaaatcttctcca
aacaaaagaaaagtgtcaatattacaattataatttttacccactcaaaa
aaattcttgaaaaaagatGTGTGTGGATTTTTGTGTTATAAGTTTTCcat
tttgagttgattttgttgtgaGAGTTTGtcgttgcttgataaattgtttt
ctcgctacgcaagtttctgcgtagctagccgggtaTTTaaaaggctggaa
caccggattcttccagtcgtttatacaactttattattagtattagtatt
attagtattacacgcattataaacgactcaaGTCTAAGGCTAAAAGGATA
ATTTAGGCAAGATTTAGGGCAATaaattatcctaaatattctTAACACCA
TTCTTTGGCTAGAGTCAAATTCAAACTAGACTCGTAATACATACGTCTAA
AgccataaaatggcattttagTGAAAGTATTGAGCTGTTGATGCTCtgaa
atgacattcttaggttTAGTAGTCAAATCCATGGTGgtggtattcttagc
atattcttaattttttggccaatttcattatggacattcttataaatata
TTCTTATGAATAGAGCGTGTATTGGGCAAATTATTTAACGTAACAGATTC
CCTATGTACAAGGAATAATATTACAAGTTTAACTTTAATGTATTTCATTA
CGGTCCAGCATATCTTTTTTGTTCATTACAGAGCGATGAACCGCGCCTTG
GCAGCACACCATCGAGTCTAGCGGCCAGTCGTGAAAGCATTATCGAAGAA
TGGGAACGATTTGAAAGTTTGGAGAAGAAACAAGAAATCCAAGCCTTGAA
AAATCACATCGCTGAAATTAAGAAAGAAAGCGATAGGACTACAGTATGTT
TTTTAGCTTAGCTTTCTGATACCGTTGTTTAGTATGATTGCAACTGTATG
TGCCCGATTTTTATTTGTCTCCTTTAGTCTAACATTAAAACTGATCAACA
TCAAATTATATCAAAATTGTCTGCCTATCCAAAGTGTCTGTCTTTTGCGA
GTACTCAAGTAAGACGGGTGTATGTTGTCATAATAGAGAAACTACTCGAA
CCCAGCTTTTTATGCGAgcgaaccattgagtttaaagcccgaagggctag
agttcaatctctaatctttctcagacaagaaaaagtgaagcctaaaAAAA
tgcgacagattgaatctaacaattcttttgtttacgattaatattttttt
tcgaaatttagcggtaaattttagtttcaatctgtcatttgtgtaaaaac
caggcgagtcgctcaaggccgcgcaactttggtaggatttgttggcttca
aaccCTACCAAGCAGATtaacttctagcccttcgggcttatacttcattg
gagCGAACACTAAATAGAAAGCTGACGttttaattttgattatttcaggA
ATTATTGATCAACAAGAAGAACCAATACGAAGAATCGAAAAGTGAATCTT
CCGCCAAAGATGAACAAATCCAACTGCTTCAAAAACAAATCAACGAACTC
AACCAAGTTATTGAAACATTACGAGCCGAGAAAGATGAACCGAAAGAGAA
AGTGTTTATTTCTAAGGAAACCGATTTGGATGTTGGAGTAGAACCCCAAC
atgaaattttagcgaaaaaTGAAAGTTTGGTATATCGTGTCTTAGTCAAA
GAATCTACATCTAAAGGAACTGATACTGTAGATCTTCAAAATATAAACAT
TGAATGTGTGAACCACAAGGTCTCAATGGAGTTTGTCTCTCGAGAAACTG
ACACTTTCGATCTTAACGAAGCTGTTTTGGTACAAGAACAATTTGGAAAG
CTAGAGGAAGAAGTGTTAGTAACGCGTGATGAGATTAATGAGGTCTGTGG
TCAGGTTTGTGCTGAGgaagatttgaaaatattacaaaaggaaTACGATC
AACTTTCCTCAAAACATAAAGACACGACGGATAGATATGAAAAGCAAATT
GAACTTTCCAATACGTTAGAAGGAGAAAATAAAGATCTAGCCAACGATTT
ACGGACAACGCGGCAACATTTGGAAGATATGACTTCAAAACTGAATAACG
TTCAACAATTAgtaaatgtaaaaaataaagaaatcttCGAGCTTTCTTCT
TCGGTCAATCTACTACAAAAGGAACTAGACTCTACAAAAGATTTAGCAGC
AGAACAACAGGCTAATGTACGAAACAATAATCTTACCGAATTTGAAAAAC
TGCAAAATAAGATGAGTCTTGTGGAGGATGAACTGATGCAAAGTCGACAA
CAAAAGGAATTATGTGAAGATAAAATTGAACAACTTATGAATGAAAACGA
ACTGCTAAAATATGAGAAAATTTCTCTTGAGAAAGTTACAGAGGAAGTGT
CACTCCAGTCTGCCTATAATCCGCTAGAACCATCAATGGGTGAGAAAAGC
GATTCGGATTTAGAGCTAGGGCTATTACGACAGCAGCTTGAAGAACAGCA
TCTTGAAATGACTAGCCTTGAAACCAATCTTAAATCAGATGTCAGCGAGT
TACGACAAAATGCGGAAAATCAGGAACAATTGATTGCTAAGCTAGAACAT
GAAAATCAAAAGCTTTATAAAGAGAAATATGAACTGAATGAAAATATCTT
GGTGTTGCAAGATCGCATCAACACAATATCTAAGGAACACGAGAATCTTT
TATCTAATGAAAACGAACATCGTACTTCAATCGAGGAGGATTTAAACGAT
TCGATGAGCTTCTCCGAACACGATTCAAAGATCGAACAACTCTTATCGAT
TCATAAGAACGAGATGGATATGCTTCAAGAAAAACTGAATGAAACCGAAA
AAGATCATGAAAGCGCATTACGTGAAAAAGACGATTTGATTTCATGTAAA
GAGCAACAAATCTTGTCTTTGCAAATTGATCTTGACGAGAAATCAAGGGA
TTTGAAAAGCCTGAATACAGAGTGTTCCCGTTTGCGCGCGCTCAAAGATA
AAGAGCAAGCGACGAGTGACGAACAAGAATCGTATCTGCTTCAGGAAATC
GAACACGTGCAAcacgaatgtaaacaaaagcTACACACTATGGAGGAGGA
TAAGGATCGTCTAACCGCTCTCCTTCAAAAACAATACGATGAAAAACTTA
TCGAAATGGAAGTCgaatttgaacaaaataaatctattgAAATTGAAAAC
GTTCGAGAAGACTTACAAAATGAGATTGACTCTTTACTTGCACAAAGAAC
GGAACTGATGTCAGTTCTTAGTAAAATGGAATCATTGCTTATTGCAAGAA
CACCGACGAGCACGACTTCATCGTCCGGTAGAAACGGGTTCCATTTTGAT
TTCCCCGATAATGGAAAACTGGAAcggaaatcgaaagtggaacaTTCGAA
CGATGATATGCTACTTATGATTTCGAATCTTGAAACTCAAATGAATGGAA
CAGATTTAAATAAAACATGGCCATTACTTGAGAACCACACTTCTTCGAAT
CGGAAAGCGCCGCTTTCTCCGAACGGTGTCAAAGCACAGTTCGAAAGAGC
ACGTAGTGACATTTCGTTACAGTTACGAGAACTTGATGACATCATGATGA
GTGATTCACGTTTACCGAGTTTAAGCGCGTCTGAAACGCGTTCACATGCG
TCTGAACCGCGTATCGGATCAAGCTTAAATGCTTCTTTTGATGAACTTTC
GTTTGACCACGATGATAGTATTTCCGCTTCTTCACCGCTTACAAAACAAA
CGCCCCTTCATTCACCCACTACCACCCACACGCCATCACCCTCATTCCGT
GATTCAGGGATTTCAACGATAGAACTATCAAACCGTAACACGTTTTACGA
GAAACAGTTACGAGACTTGTTACGTTCTTTCTTAAGATTCGAACTACAAT
GTCATTTAATTGCGACTGATTTCTCTAACGAAAAATGGTTTTTAGACTTG
CAGAAATGGAAAGATCGCGCCAATAAACGCTTGAAAAGGCTCGAACAAAG
ATATTTGAAATATGATAATACTCTTTCGAAATCGATCACTTATCGACCGA
CTGATGAAGAGGTCAGGGAAATTATTGCTGACgtcaacaaaaaatatgat
CGGTTCAAACAGcatgaaatttaaagtttttttcagaatatatttttaat
ttagTTCGAACTGTTTGAAAAGTATTTGCATGGGGTCTCTTCCTTTATAT
GATTTCATTAATTTTATAGACCATTTCATGCTGCGAAATGAATGATGGTT
AAACAGGACTGATATCGGTGTTTATTCTTTTCAGAATGGTATCTACAAAA
TAACCATTTGTATAATGCTAAAAGTCCCCTAACGGCAAACAGCGCTGCAT
CATAAATACTCAGGGAAAATCAGATCTAGAGCTCTCTAGTGCCACTGTCT
CAGTGCCTCGGTATAAACGTTTTATTCTGGGTCTGTTTTTAGAGGATTtc
aaatagacgatatcggctttccgaattctccccgaatgattacccatgat
gcattgcgcaaaaaattcacggacgatatttACTTTCCGTGANTCCTGAA
AAGAGAAGAGAAACCTCCAGTGCTAGTGCCACTGTCTCAGTGCCTCGGTA
TAAACGTTTTATTCTGTGTTCTtccaaaacctttaaaataagCAGTTAAG
TTTAAATATTCTATGCTCCCTTTACCAATTTGTTGGTAATGGAATAATAC
GATTTGTatatttattgtaaatattttgaccttATTAGGAAAGAGTGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011125XLOC_011125Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019784-exon-sc0000336-1491911889:180565..180911TCONS_00019784-exon-sc0000336-1491911889:180565..180911Clytia hemisphaericaexon
TCONS_00019784-exon-sc0000336-1510915933:180565..180911TCONS_00019784-exon-sc0000336-1510915933:180565..180911Clytia hemisphaericaexon
TCONS_00019784-exon-sc0000336-1575043694:180565..180911TCONS_00019784-exon-sc0000336-1575043694:180565..180911Clytia hemisphaericaexon
TCONS_00019784-exon-sc0000336-1491911889:182632..182869TCONS_00019784-exon-sc0000336-1491911889:182632..182869Clytia hemisphaericaexon
TCONS_00019784-exon-sc0000336-1510915933:182632..182869TCONS_00019784-exon-sc0000336-1510915933:182632..182869Clytia hemisphaericaexon
TCONS_00019784-exon-sc0000336-1575043694:182632..182869TCONS_00019784-exon-sc0000336-1575043694:182632..182869Clytia hemisphaericaexon
TCONS_00019784-exon-sc0000336-1491911889:192596..192757TCONS_00019784-exon-sc0000336-1491911889:192596..192757Clytia hemisphaericaexon
TCONS_00019784-exon-sc0000336-1510915933:192596..192757TCONS_00019784-exon-sc0000336-1510915933:192596..192757Clytia hemisphaericaexon
TCONS_00019784-exon-sc0000336-1575043694:192596..192757TCONS_00019784-exon-sc0000336-1575043694:192596..192757Clytia hemisphaericaexon
TCONS_00019784-exon-sc0000336-1491911889:193313..196614TCONS_00019784-exon-sc0000336-1491911889:193313..196614Clytia hemisphaericaexon
TCONS_00019784-exon-sc0000336-1510915933:193313..196614TCONS_00019784-exon-sc0000336-1510915933:193313..196614Clytia hemisphaericaexon
TCONS_00019784-exon-sc0000336-1575043694:193313..196614TCONS_00019784-exon-sc0000336-1575043694:193313..196614Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000336supercontigsc0000336:180565..196614 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.206134	0.159428	0	0	0	0	0.128502	0.372387	0.52576	0.265374	0.0913088	0.568103	0.928715	0.340481	0.277859	0.812495	0	0.161453	1.5717	0.562306	0.604914	0.9755	0.322326	0.525226	3.72689	2.2137	0.458669	0.0891755
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019784 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top