TCONS_00019866 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019866
Unique NameTCONS_00019866
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length118

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019866 ID=TCONS_00019866|Name=TCONS_00019866|organism=Clytia hemisphaerica|type=transcript|length=118bp
ACGAACAAGACGATTGTAGGATAATCATCAGTAAAAGTTATTACAGAACT
GATCCTAACAATAACAATGACAGCAGcaaaaatggTGAGGATCAATTTGA
AGAATTATATATGCCAAC
Run BLAST on NCBI

transcript from alignment at sc0000339:159805..160220+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019866 ID=TCONS_00019866|Name=TCONS_00019866|organism=Clytia hemisphaerica|type=transcript|length=416bp|location=Sequence derived from alignment at sc0000339:159805..160220+ (Clytia hemisphaerica)
ACGAACAAGACGATTGTAGGATAATCATCAGTAAAAGTTATTACAGAACT
GATCCTAACAATAACAATGACAGCAGGTGTATGTCTCTCAGAAATAAAGT
CTTTTCCAAGTGGATCAAAACCTGATTGAAATACTTCAATGAGGGTTTAA
ATTTTGTGGTTGTTGGGGCTCTAGTACTGCACAATTTTAAGATTTCATGG
GGACTTAAAATTGCAGGTGTTAGTATTGCGAGACAATATTATCACAATTT
TGTGGCTTTTTTACTGTCAAATTGTGTATGTCGGTTGTTGGAATATACCC
TATTAGCGCTTATTTTTtcatactttatttttttagccaaaattgagatt
gaaaaacaaattttgactttttagcaaaaatggTGAGGATCAATTTGAAG
AATTATATATGCCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011185XLOC_011185Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019866-exon-sc0000339-1491911889:159805..159880TCONS_00019866-exon-sc0000339-1491911889:159805..159880Clytia hemisphaericaexon
TCONS_00019866-exon-sc0000339-1510915933:159805..159880TCONS_00019866-exon-sc0000339-1510915933:159805..159880Clytia hemisphaericaexon
TCONS_00019866-exon-sc0000339-1575043694:159805..159880TCONS_00019866-exon-sc0000339-1575043694:159805..159880Clytia hemisphaericaexon
TCONS_00019866-exon-sc0000339-1491911889:160179..160220TCONS_00019866-exon-sc0000339-1491911889:160179..160220Clytia hemisphaericaexon
TCONS_00019866-exon-sc0000339-1510915933:160179..160220TCONS_00019866-exon-sc0000339-1510915933:160179..160220Clytia hemisphaericaexon
TCONS_00019866-exon-sc0000339-1575043694:160179..160220TCONS_00019866-exon-sc0000339-1575043694:160179..160220Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000339supercontigsc0000339:159805..160220 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019866 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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