TCONS_00019867 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019867
Unique NameTCONS_00019867
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5486

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019867 ID=TCONS_00019867|Name=TCONS_00019867|organism=Clytia hemisphaerica|type=transcript|length=5486bp
GTGATTtatttgattgatattttttatatcaTCTTCCTTTTCCATATCAC
ACATCATGTGTGTGTCTATCATCAAGCATTCAGTGGATTCAAACttgtgt
tttttatttatttcgagATTTCAAGGAAggaataacaaaattttatgATA
TTAAGATATTTTTGTAGCTCAATGATAAATTTGTTTATTAATTCCTCAAG
GGGTGTTGCTGAATCTAAATGATCCACTAAAAATAACTTCATTGGtgtaa
ttgaaaaataaaatctctaATGATAATTTAGCTATGACTGAAGAAAGGAG
AAGGACTTTAagctttctaaaaaaaaaacaaagatctgATGAAAATTTGT
TGATTTATGAAGAAGATAATTGGAAgtttgaagatgaagaagaagaacaa
cCCATACCTAATtCTGCATCATTCTCAGCTAGCACAGGTCAAGTGAAAGT
GAGCATCGAAGAAGAGGAAGAAGGGGAACCGGAACTCTTTGTGGATCCAA
CACTTTCCACATCTAAACAGAAAGCTCATGTGTGGGACCTCGACACTAAA
ACAGGGAGGATAAAGTTCAAAATCCACTTGGTTGTTGATCATTTAGCAGC
AAGATTATTCAGTGTGTTGCTAGTATGTATTGATATCGTGTTGGTGATCA
TAGCTTTGGGTACAGAAGATGATTCTGAgGGTTATTCATATGCGACACTA
GCCATTGTATCATACTTCATGTTGGAATTGATGCTTCGTATCTTTGCATG
GGGGGAGGAATTTTTCCATCATCGCTTGGAGGTGATCGACATGATAATCG
TGGTGCTTAGTTTCATCACCACTATCGTTTTTGAAGTTATCACTATCGAT
CAGCATCTTAAGTTTGGAAAGTTGATCATCGTGTTCCGTCTGCTGAGGAT
TTTGATGTTGTCTCGTATCTGTGTCGGCCGAAAACACCTTGAACGATCCA
CCAGAAATTTGATCTCTCAAAACAAAAGGCGTTACGTGAAGGATGGTTTC
GATCTTGATTTGACTTACATCACAGaccgAATGATTGCCATGTCCTTCCC
ATCGTCAGGAAAAACGTCAATGTATCGAAACCCTATTTCTGAAGTGGCAA
GATTTTTCAACACTAAATATCCTGGTCATTACAAGATTTACAATCTATGC
AGTGAGCGCCATTATGAAACACATTGGTTCAACGACAGTGTGGAAAGGGT
TCTGATTGATGACCATAATGTACCAAGGCTGAGtcaATTGGTACAATTTG
TACACAGTGCAGATGAGTGGATGAAGAAAGATGAACAGAATATGTTGGTC
TTGCATTGCAAAGGAGGAAAAGGTCGCACAGGGACAGCAGTAGCAGCATG
GTTATTATTCTCTGGACAATTCAAATCTGCTGACAAAGCATTGAATTACT
TTGGCATCCGAAGGACAGACGAAGCTAAAGGGAATAAGTACCAAGGTGTT
GAAACGCCGAGTCAGAGTCGATACGTGCGCTACTTAGAGAAGGTGATTTA
CTCTATGAACGGACGTCTACCCCAACCCAAACAATTACGCATCAAAAGTG
TCAAAATAACTGGCTTGAAAACCGTTGGCAATGGGGATGGTAGCGACTTG
AGTGTGGAGATTGTCCAAAATGGTCAGATCATTCATAAAGTGGTGTTCAA
TGAACCAGGAACCAACTTTTTGAAAACGAAGGGGGATTCTTTGAAAGTTA
TCTTCAACGAGAAAGACAACTTGATGGTTGTCGGCGATACAAAAGTTCGA
TTCCATTCTTCAAATACTaGTGTTCCAAAGGATTACGATTTTTGTGCATT
CTTCTTTTGGTTTCACACAAGCTTCATTGAAAATAAAAGGTTTTACGTTG
AGCGAAACGACATAGGGAATTGCCATAAGCGGAAATACTGGAAGACGTAC
ACGGAGAAGTTTTCGGTCACCGTCAAATTTGTTGACCCCGATGAAAGCAA
ATAAACAAGGGAGTATCATTTTAGAGGCAATTTATGGAATTAAATTTAGA
GGACACaccttatatatatttttaaccattttcctGTTATTTTCTGTTTA
TTTTCTGCTATGTTTTTTATTAGAGATAAttttatatgaaaatattttga
tataattGCCCATGCTTTACAAAACAATACGTACCTTGGAGCCTGGATga
gcaagtgaaaaaaagtataaatttatTATCGGAGCCTTTTCTAACGGTAA
GTTTCTAAGTGATTTATTATCAGAACGATCTATACTAGCTATActgatac
acccctgtctcacagcgcCGGTAGAACTCTTTCCCCGGTGGgaattccca
atggggatagaaatattaTTGTTCCAATGCTAGAaaatccatttttggag
tgcaatttttaagcattgaatttcgaatggggatgaagtCAATAGCGCTC
CACATCCCACACATAATCacgattgaaaatttttttctttctctttcccC
ACCGGAGACaagatttttgccaaattttccaggggCTGAgatcccagcgg
gtctgtgacacaggggtgtgtgtactgatctattttttatttcacttttg
cATTAGAGGTTGTATTTTTTTCTGTCAAAAATTGTTCCATTTGAACGATA
TCCTTCCTACATTTTAGAGGAGCTTTTTTTGATTCCCTTTCCTTGGAAAG
TTTCTCTCAATCCTCacttataatattttttatattcatttttgtttttg
ctatCTATCTCTTTGAACACAAACTTAGCACGTGCCCTTTTATTGTCAAA
CTTCTTGGCTTTGCATAACAATTAgacaatttttctaaaatttttcgTCG
ACTAGGGGTCCTAGCTccttctgatatagaaatacTAAGATATGTTGTTC
TTTACCCAAAGGAGCTGTTCGAGTCGAAAATAGAGTTATCTTaatacacc
tccttctcacagacccgctgggaacccttcccactggaataATAGGCTAA
TCAAAATACGAAAAAACTCACTAGTCTATTAcattttcgtccgtcgtcgt
gattttgccgatttacttaacctcactatggAATTCAAATCTCAATCCAT
AAAAGGGAATATtgatccccatcgagttttggtccgttatttttacacCC
ATTGGTTGATAAAACttcaccgggtctgtgaaagAAGGGGGTGTCTTAAT
CCGATGGTCCCTTTGGACTATAGCTTTTTTTTATGATAGGATAgaataga
aattaaaaatttaaatattaatATAAATAGAACGCAAAATTGTATCAATG
GTGGGgtaaaaatagaatttcttgatctttgaaaattttatatttgattg
taaattgaaattgtaAAATCTTGTggctaaagatttttttatgaattacg
CAAACATTTGAGCATGTATTAAAATTTCTACTCTATAACAGTAAGGGAGA
GGCCACACCTTTGAACTTCTTTGTAGTACTGAACAGTCGGACAGGACAGA
ATATATGATAGGCATGCAGCAGCCGTTTGAAATCTTGTTCCCAGTTCTCT
ATTCATTTTTTGCGATTGAAAGTTGGTCAATATAACATATTTTCTGTTTC
GATCTTCCTCTTTGATTGAAAGAACATAAAACGAAATTGTAATCCTTTCT
TCCCACACATCAGATGGTCCCAGACAACTTCCTTATAAAAGTTCACGAGG
AGCGGAAACCTCAAATCGCTTACCGAGATAATTCGAACAAACCTTAAGCT
TAAGTAAGAAAACAATCGATCAACGAGGAGAGAAGACAGACAGAGAGTAA
GAAGAGGATGTTGAATGTGACACACAACATGACGACTTGGAGCAACACCA
CCTTACCTCAGGTGAGCGACCGACCTTTGGAGATGATCATCCCACTAATG
TTGTCTTGTGTGGTGGCTGTCCTCGCCAATAGTTTCGTATGCTTTCTCAT
ACTACGTGTTGAAAGATTGAGAAGTGCCACTAACGTTTTTGTATTCAGCC
TATGTTTATGTGACATCCTGTTTGCTGGCGTGCTTCTCCCCATGCATTGT
TTCTACCAACACGACTTGGTGTACCAATTCTTGACGCTCATCACCGTCCT
CATCTATATAGTCAACATGGCGTGCACTACGTTCGAACGCTTGATTTGCA
TCACCAAACCCATGCGCTACTTGACCTATTTGACCAAAACTAAAGCCATT
CGAATCGTTATTACAGCATGGATTTTTCCTGCTTTATATTGCTGCATACC
TTTGTCATGGCATAACAACACACAGATTCTGATCCACAAACTTTATCTTG
TGTTCAGTCTGTTGGTCTTTCTTCTCCTCCCTTTTGTATTCATCGCGTAT
GTTTACATCAGAATTTGTGGCGAGATCAAACGCCTCAACAGACACAACCC
GCACAACTCTTCCTCTCTCAGTGAACAACTACGTTCCTCAAAAAGAAAGT
GCTCTTTAGCCAGCATCACTTCGTGTCTTCTGGTGAAGCGGGACAGTACA
GTAGATAAGGACAAGATTCAAGTGGACTTGTGCACAGACGATCGCTCCTC
AGATTGCACCTCAATCACCTCAACAGAGATTACTAGCACCTCAGATCGAC
GCACAAGTTTCAATAAGAAACCAACAGCCGTGCGCTCCAAGAAAAGCAAA
AAGTCCTCTCGATCTAAGAAGAAGAAAGAGATTCGAGCTTCCTTACCATT
CGCCATAACGACTTTCATGTACATGTTTACGTGGCTCCCCGTTATCTATT
TGACTATTCTCGATACAATCGACAGATTGGATCTAGCACCAATGATCCTA
TTACACTTCTCCATCTTCGCAATTGCACTGAATGCAGTCTGTGTACCCTT
CATCTATGGATTGTTACTTCCAGGCTTCCGATTGACTTTATTCCGTATGT
TCACAAAGCAAAAGTGATTTAGTGAATTTTTTGTGAATTTCATGAGGATg
tttttatttggaatttaaaGAACTAGGTATTTGAATTATTTAAATTGCAT
GCTGAAAATCTTTATATTTANGaggatatttttatttggaatttaaaGAA
CTAGGTATTTGAATTATTTAAATTGCATGCTGAAAATCTTTATATTTAAT
GATTATCTACCATTGTTAAATATTGAAAGAGGTATGCTCAGTCATATACT
ACTCTCAATATAGTTTCAGCgataaaagactttaaaaaaaaattatttgc
aaaCGCTGCTTCGACAGTTGTCGGTTATTTTTTACAAATCATTAGATCAT
TACTTAGTTGAAACcgaaaatatataatttcaaaagAGGCGTAATGCATA
CGCAGAATATGAAAATCTACgttcaaatagaccttttcgaattatcataa
attacgtcacgaacatcaattgcctcgttttgaaattattgccaaggtga
ttaactcccagcggatttcaTTAAAagtactttctattcataaaaaaatc
atttaatgtctcaaggaaTATAattaccatggtaattgtttgaatacgag
gcaagtgatgatGTTCGtggcgtaatttatgaaaat
Run BLAST on NCBI

transcript from alignment at sc0000339:165971..176170+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019867 ID=TCONS_00019867|Name=TCONS_00019867|organism=Clytia hemisphaerica|type=transcript|length=10200bp|location=Sequence derived from alignment at sc0000339:165971..176170+ (Clytia hemisphaerica)
GTGATTtatttgattgatattttttatatcaTCTTCCTTTTCCATATCAC
ACATCATGTGTGTGTCTATCATCAAGCATTCAGTGGATTCAAACttgtgt
tttttatttatttcgagATTTCAAGGAAggaataacaaaattttatgATA
TTAAGATATTTTTGTAGCTCAATGATAAATTTGTTTATTAATTCCTCAAG
GGGTGTTGCTGAATCTAAATGATCCACTAAAAATAACTTCATTGGtgtaa
ttgaaaaataaaatctctaATGATAATTTAGCTATGACTGAAGAAAGGAG
AAGGACTTTAagctttctaaaaaaaaaacaaagatctgATGAAAATTTGT
TGATTTATGAAGAAGATAATTGGAAgtttgaagatgaagaagaagaacaa
cCCATACCTAATGTAAATATATTATTTCTTAACTTCCAACCTTTATATTT
GTTTCAAAACCTAGGAGTCCCAAGCCCTACTAACATCTTTTAGAACAGCC
TACTAACAAATTCAATTAAATTTTAGCATGGTTCTGTAGATTCGAGTGTA
ACATCAAATCAAGAAAGTTTGGCAGGCGATTCTATTCAAAAAGAAAGTGA
TGTGGAGAATGATAATGATGTAAATAAACTTATTTTGAAAGCAGAATATT
TCAGAACTCATTTTAAGCATGTTTGCAATGACCAGTTGATCAATTACTAA
CAAAATATGATAATTTTTAACCTTTCTTAAAGCACTAATAACAGAAATTT
CACATGCGTGTTTATTATCTTATTCCCTTAAAATCTGAATgcttaaaaaa
tcattttcgatttcagtCTGCATCATTCTCAGCTAGCACAGGTCAAGTGA
AAGTGAGCATCGAAGAANTCGTGTTTATTATCTTATTCCCTTAAAATctg
aatgcttaaaaatcattttcgatttcagtCTGCATCATTCTCAGCTAGCA
CAGGTCAAGTGAAAGTGAGCATCGAAGAAGAGGAAGAAGGGGAACCGGAA
CTCTTTGTGGATCCAACACTTTCCACATCTAAACAGAAAGCTCATGTGTG
GGACCTCGACACTAAAACAGGGTATGCCCATCACTTAGTCATATTGATAA
ACTAGCTAGCTATAGAAATACAAAGAACTAAAGTTTCTGGTCAGTAGTAA
ATAAACACTGGAGTTCAGNCCATCACTTAGTCATATTGATAAACTAGCTA
GCTATAGAAATACAAAGAACTAAAGTTTCTGGTCAGTAGTAAATAAACAC
TGGAGTTCAgtaaatatattttcttaaaaaacgtCACTTTACAAAATTAT
AAACTgttcaaatttgaatttcagGAGGATAAAGTTCAAAATCCACTTGG
TTGTTGATCATTTAGCAGCAAGGTAGGTTTACTTCGTATCTTTCCCTGGA
ATCTTCTGAGCCTTATATCCAGCTAACTACCACCGAATAACGTAGAACTT
CTATTAAGAATACTTTTTACCTTTTCACTAGATTATTCAGTGTGTTGCTA
GTATGTATTGATATCGTGTTGGTGATCATAGCTTTGGGTACAGAAGATGA
TTCTGAggtaaaaaaagaatatttcttgcgtgtaaaaatgcactgaccAC
TATTTTATTCATTCGACAAGCtttcatcttttaaaaattcttttgtacAG
CTTTGTGCTTTATGTTATGTTTGATATTGAATCCGAATGAAGGATGAGAT
TATTCTTTTTCAGGGTTATTCATATGCGACACTAGCCATTGTATCATACT
TCATGTTGGAATTGATGCTTCGTATCTTTGCATGGGGGTATTCAATAATG
TTTTCCTTTTGATATTTTTTGAATTTGAAAAGGTTAAACAAATAGTGCTT
GAATAAAGGTTTTTTGAAAAGGTATGTAAACAGGTGATATAAATAAACAA
TTCATATGGTAAAATGTCCCTTCTTTTTCAGGGAGGAATTTTTCCATCAT
CGCTTGGAGGTGATCGACATGATAATCGTGGTGCTTAGTTTCATCACCAC
TATCGTTTTTGAAGTTATCACTATCGATCAGCATCTTAAGTTTGGAAAGT
AAGAGAAAACCTTTCCAATCGTATGTGGATTTTGATTATTAACAACGCCC
TAATAATATCTAAAACTAGGTGAAGGTTCTTGTTAACAGTAAAAAGTGCT
CTCCCAGAAAGAGCCTTATAGCAACATCAAAACTTCTGGAGTTCTATTTA
TAGCAATACCTTCAAAATTTGTTCTTCCTTCTTTCTATGATGTTCTTAAA
CTCTCCATTTTCTATAACATTTGTAAATACAATCAAGGGATGATATTTTA
TAATCTTCTCTTTTATAGGTTGATCATCGTGTTCCGTCTGCTGAGGATTT
TGATGTTGTCTCGTATCTGTGTCGGCCGAAAACACCTTGAACGATCCACC
AGAAATTTGGTATCTTGATTAATATCACCattatttagatatttttttaa
tttagtggCCAGCGACCACTATACTGTCATTAGCTTGACCATTTTCTTGA
TAATGAacctttgtttaaaaaaaacttaaaccTTTGTTTAGATCTCTCAA
AACAAAAGGCGTTACGTGAAGGATGGTTTCGATCTTGATTTGACTTACAT
CACAGGTGAGAAAACTTGACCTTCATCTTCACTCACCACCGAATCTATCA
ACGGCAACTTATCCACATATATCTTGTCATTCTTGTAATGAGCACGGGTG
GATTCGATTTGATTTNATCTTCACTCACCACCGAATCTATCAACGGCAAC
TTATCCACATATATCTTGTCATTCTTGTAATGAGCACGGGTGGATTCGAT
TTGATttgatcttttaatttttcagaccgAATGATTGCCATGTCCTTCCC
ATCGTCAGGAAAAACGTCAATGTATCGAAACCCTATTTCTGTACGTCaac
tttttatttctattcggatactggttttatttttacacccctTCTGACAG
ACCCACTGGTACactttcccactggaaaatttggccaaatcATCGTCCAC
GGTAAAATCATCCTCcagtttttgtccccactgataataatcaaataaac
caatcctcactgccaaatatttacttttttcccatccccactgaattttc
tgactaaaaaaaaactaaagaaatgaaaaatatggaATATCAATTTACAT
CGAGTTTTCTGTTAttcttatccccactggctgaaaaaaatcctatCGGG
TTTTTGAGAAGGGGGTGACTTATTTAGAGACTTTGAaaaccttaagggaa
gaaattttggcgtaAAGAAAGTTTGGCAGATTTGGCGGTTTTGGTCAAAA
TCCGCCTAAATTTATATTACTGCATTTAATTTATTCTGCTAAttgtgtgc
tatttcaggccttaaaacaggtttttccttATTTAATGGCGGTTTTTGAG
CAAAAAGTTTCCTTCATCCGCCAAActaaatcctcgccaaatttaatttt
tcaagccatCCGCCAAACTGAAAAAACGTCTTCGGCGATTCCCTAAATca
aattcccgcaaaaatttcttcccttaataAGGTATTTCAACCATCAAGAA
TATTTTCTATGTCTCGTCTGATAAACTTTTTCCAATACCACTTCTTTCAG
GAAGTGGCAAGATTTTTCAACACTAAATATCCTGGTCATTACAAGATTTA
CAATCTATGCAGTAAGTAACTGTTATTAATATTCTTCTCCGAGAAATCGA
TTGTACANTAAGATTTACAATCTGTGCAGTAAGTAACTGTTATTAATATT
CTTCTCCGAGAAATCGATTGTACaaagtgaaataaaatatttcagttttc
tTTTTCCCGACTTTGTTCTTTTAATATCAGGTGAGCGCCATTATGAAACA
CATTGGTTCAACGACAGTGTGGAAAGGGTTCTGATTGATGACCATAATGT
ACCAAGGCTGAGGTAACAAACATTTAATAGCCTTTATTAAATCTTCATTG
TAGAATGtcacatatttatttttgaaattttattttcagtcaATTGGTAC
AATTTGTACACAGTGCAGATGAGTGGATGAAGAAAGATGAACAGAATATG
TTGGTCTTGCATTGCAAAGGAGGAAAAGGTACCTAATTGTTCAATGTTTG
GGAACCGTATGATAATGCGCTCTTAATATTTCTATATAACATAATACAAT
TTACATTTTTCATCCTTCAGGTCGCACAGGGACAGCAGTAGCAGCATGGT
TATTATTCTCTGGACAATTCAAATCTGCTGACGTaagcaattttcttttt
aaaagaatcagtcaacaacttttttgaattttgctgCATTCGTAAAAATg
ttcttcttctcttttttcaGAAAGCATTGAATTACTTTGGCATCCGAAGG
ACAGACGAAGCTAAAGGGAATAAGTACCAAGGTGTTGAAACGCCGAGTCA
GGTGAGTTGAATCGtttctttttgtttgaagttaTAGCCAAGACAAACGT
TTTTGTGTACTTCACAGAGACAAATCTCAAAACTTATAAGTTAAACAATG
ATTTGGCCAGGGTGCTTTTTAGTCAACTTGGTTATGTTCTTCGTTATGTA
TCTTCTTCGCACTACTgtaaattttttcttcattccACATTAGAGTCGAT
ACGTGCGCTACTTAGAGAAGGTGATTTACTCTATGAACGGACGTCTACCC
CAACCCAAACAATTACGCATCAAAAGTGTCAAAATAACTGGCTTGAAAAG
TAAGCTCTTCTGTCTTTTGTTCTTCCTGCATTTGTCTTTCCCAAAAAATT
TAACCCGAGCTTATCGAATCTCAACAATGTTCCCAGCTTCTTGCTGCTTG
CTGATGGGCGCCATATAACACTTAGTAACGTAACAAAGCCTGCATGGGAA
CGAGGGTAATGGAATCCTCATTATTTGAAGTTTCGAAAACTTTGTCCAAC
CGACGAAGCTAGATTGGCCTAATAAAATGTCCCTGGAAGGTGAAaacttt
tcaatgattttcatattttattctTTGTGAACTGTAGCCGTTGGCAATGG
GGATGGTAGCGACTTGAGTGTGGAGATTGTCCAAAATGGTCAGATCATTC
ATAAAGTGGTGTTCAATGAACCAGGAACCAACTTTTTGAAAACGAAGGGG
GATTCTTTGAAAGTTATCTTCAACGAGAAAGACAACTTGATGGTTGTCGG
CGATACAAAAGTTCGATTCCATTCTTCAAATACTGTAAGTGTCTTTGTCT
TTGAATcaagtcaaaagttatgatcaattgaataaaaaagttactttcag
aaagtgctcgaaatcgatgaaaatcgacctatcagatttttattttaaga
ttggcaatcgcaatagcctccacatgattaagagcattttgtAGTAATTT
AAGACATACATTTTTAACtaagcaaaaaagtatactGCAACAATTCGTGT
ACTCAAACATGTAAGGAAATACTTTTTGAAGTTCAAAATTAAGTAAAGCa
cgattgacgtcaaaatgtGTCCAAAACGTAACAGATTCCACAggatttca
aactttaaatNCAAAAGTTATgatcaattgaataaaaaagttactttcag
aaagtgctcgaaatcgatgaaaatcgacctatcagatttttattttaaga
ttggcaatcgcaatagcctccacatgattaagagcattttgtAGTAATTT
AAGACATACATTTTTAACtaagcaaaaaagtatactGCAACAATTCGTGT
ACTCAAACATGTAAGGAAATACTTTTTGAAGTTCAAAATTAAGTAAAGCa
cgattgacgtcaaaatgtGTCCAAAACGTAACAGATTCCACAggatttca
aactttaaatgaCCATATCTTTTTGTGTGTTTGAGTATAAGACTTGTCGT
ATAatacttttttgctcagaatttcatgttcTATCCGATGGTATCAGTCA
TATTTCCGTTTGATTTGACTTTAAGGGTCGCCCCCCTACTAAATGAATTA
TTAcaaattttcgcaaattttcctcgCTTCTTGAttaactttcgttttca
tgAGAACAGCAGAGTTTAAAAGAATGTAGGTACCTGGATTTATAAACGTT
CAGATTCATGAATTGTGGGCCATTGTGAGTCGAATGAGCAAGCCTTAATA
TTAATTCAAATGACTGATTTGTTccatcattttcgatttttcagaGTGTT
CCAAAGGATTACGATTTTTGTGCATTCTTCTTTTGGTTTCACACAAGCTT
CATTGAAAATAAAAGGTATCAACGTCTGACCATTTTTTCTTCTAGTTGAT
GAAGCTAACAAATCATAAGAATTGAGATACCATTATATAAAAGCCCAAAT
TAATATAGGTTGCTGGCTTCCACTAACGCATTCGTGCTTCTTTACTATCA
GCGGTTTtttagaggtctgtgattccgGCTAAAATTATTAATGATCTTAT
AAGTTTTCGCGTAAAAGCTTTTTATGTCAATTAGTGGAATACAGGCTCAT
TATCGAAAAACGCTCGATTNCAAAATCTTTTTATGTCAATTAGTGGAATA
CAGGTTCATTATCGAAAAACGCTCTTTAATCAATAAGATTTTTATTTCTT
AAGGTTTTACGTTGAGCGAAACGACATAGGGAATTGCCATAAGCGGAAAT
ACTGGAAGACGTACACGGAGAAGTTTTCGGTCACCGTCAAATTTGTTGAC
CCCGATGAAAGCAAATAAACAAGGGAGTATCATTTTAGAGGCAATTTATG
GAATTAAATTTAGAGGACACaccttatatatatttttaaccattttcctG
TTATTTTCTGTTTATTTTCTGCTATGTTTTTTATTAGAGATAAttttata
tgaaaatattttgatataattGCCCATGCTTTACAAAACAATACGTACCT
TGGAGCCTGGATgagcaagtgaaaaaaagtataaatttatTATCGGAGCC
TTTTCTAACGGTAAGTTTCTAAGTGATTTATTATCAGAACGATCTATACT
AGCTATActgatacacccctgtctcacagcgcCGGTAGAACTCTTTCCCC
GGTGGgaattcccaatggggatagaaatattaTTGTTCCAATGCTAGAaa
atccatttttggagtgcaatttttaagcattgaatttcgaatggggatga
agtCAATAGCGCTCCACATCCCACACATAATCacgattgaaaattttttt
ctttctctttcccCACCGGAGACaagatttttgccaaattttccaggggC
TGAgatcccagcgggtctgtgacacaggggtgtgtgtactgatctatttt
ttatttcacttttgcATTAGAGGTTGTATTTTTTTCTGTCAAAAATTGTT
CCATTTGAACGATATCCTTCCTACATTTTAGAGGAGCTTTTTTTGATTCC
CTTTCCTTGGAAAGTTTCTCTCAATCCTCacttataatattttttatatt
catttttgtttttgctatCTATCTCTTTGAACACAAACTTAGCACGTGCC
CTTTTATTGTCAAACTTCTTGGCTTTGCATAACAATTAgacaatttttct
aaaatttttcgTCGACTAGGGGTCCTAGCTccttctgatatagaaatacT
AAGATATGTTGTTCTTTACCCAAAGGAGCTGTTCGAGTCGAAAATAGAGT
TATCTTaatacacctccttctcacagacccgctgggaacccttcccactg
gaataATAGGCTAATCAAAATACGAAAAAACTCACTAGTCTATTAcattt
tcgtccgtcgtcgtgattttgccgatttacttaacctcactatggAATTC
AAATCTCAATCCATAAAAGGGAATATtgatccccatcgagttttggtccg
ttatttttacacCCATTGGTTGATAAAACttcaccgggtctgtgaaagAA
GGGGGTGTCTTAATCCGATGGTCCCTTTGGACTATAGCTTTTTTTTATGA
TAGGATAgaatagaaattaaaaatttaaatattaatATAAATAGAACGCA
AAATTGTATCAATGGTGGGgtaaaaatagaatttcttgatctttgaaaat
tttatatttgattgtaaattgaaattgtaAAATCTTGTggctaaagattt
ttttatgaattacgCAAACATTTGAGCATGTATTAAAATTTCTACTCTAT
AACAGTAAGGGAGAGGCCACACCTTTGAACTTCTTTGTAGTACTGAACAG
TCGGACAGGACAGAATATATGATAGGCATGCAGCAGCCGTTTGAAATCTT
GTTCCCAGTTCTCTATTCATTTTTTGCGATTGAAAGTTGGTCAATATAAC
ATATTTTCTGTTTCGATCTTCCTCTTTGATTGAAAGAACATAAAACGAAA
TTGTAATCCTTTCTTCCCACACATCAGATGGTCCCAGACAACTTCCTTAT
AAAAGTTCACGAGGAGCGGAAACCTCAAATCGCTTACCGAGATAATTCGA
ACAAACCTTAAGCTTAAGTAAGAAAACAATCGATCAACGAGGAGAGAAGA
CAGACAGAGAGTAAGAAGAGGATGTTGAATGTGACACACAACATGACGAC
TTGGAGCAACACCACCTTACCTCAGGTGAGCGACCGACCTTTGGAGATGA
TCATCCCACTAATGTTGTCTTGTGTGGTGGCTGTCCTCGCCAATAGTTTC
GTATGCTTTCTCATACTACGTGTTGAAAGATTGAGAAGTGCCACTAACGT
TTTTGTATTCAGCCTATGTTTATGTGACATCCTGTTTGCTGGCGTGCTTC
TCCCCATGCATTGTTTCTACCAACACGACTTGGTGTACCAATTCTTGACG
CTCATCACCGTCCTCATCTATATAGTCAACATGGCGTGCACTACGTTCGA
ACGCTTGATTTGCATCACCAAACCCATGCGCTACTTGACCTATTTGACCA
AAACTAAAGCCATTCGAATCGTTATTACAGCATGGATTTTTCCTGCTTTA
TATTGCTGCATACCTTTGTCATGGCATAACAACACACAGATTCTGATCCA
CAAACTTTATCTTGTGTTCAGTCTGTTGGTCTTTCTTCTCCTCCCTTTTG
TATTCATCGCGTATGTTTACATCAGAATTTGTGGCGAGATCAAACGCCTC
AACAGACACAACCCGCACAACTCTTCCTCTCTCAGTGAACAACTACGTTC
CTCAAAAAGAAAGTGCTCTTTAGCCAGCATCACTTCGTGTCTTCTGGTGA
AGCGGGACAGTACAGTAGATAAGGACAAGATTCAAGTGGACTTGTGCACA
GACGATCGCTCCTCAGATTGCACCTCAATCACCTCAACAGAGATTACTAG
CACCTCAGATCGACGCACAAGTTTCAATAAGAAACCAACAGCCGTGCGCT
CCAAGAAAAGCAAAAAGTCCTCTCGATCTAAGAAGAAGAAAGAGATTCGA
GCTTCCTTACCATTCGCCATAACGACTTTCATGTACATGTTTACGTGGCT
CCCCGTTATCTATTTGACTATTCTCGATACAATCGACAGATTGGATCTAG
CACCAATGATCCTATTACACTTCTCCATCTTCGCAATTGCACTGAATGCA
GTCTGTGTACCCTTCATCTATGGATTGTTACTTCCAGGCTTCCGATTGAC
TTTATTCCGTATGTTCACAAAGCAAAAGTGATTTAGTGAATTTTTTGTGA
ATTTCATGAGGATgtttttatttggaatttaaaGAACTAGGTATTTGAAT
TATTTAAATTGCATGCTGAAAATCTTTATATTTANGaggatatttttatt
tggaatttaaaGAACTAGGTATTTGAATTATTTAAATTGCATGCTGAAAA
TCTTTATATTTAATGATTATCTACCATTGTTAAATATTGAAAGAGGTATG
CTCAGTCATATACTACTCTCAATATAGTTTCAGCgataaaagactttaaa
aaaaaattatttgcaaaCGCTGCTTCGACAGTTGTCGGTTATTTTTTACA
AATCATTAGATCATTACTTAGTTGAAACcgaaaatatataatttcaaaag
AGGCGTAATGCATACGCAGAATATGAAAATCTACgttcaaatagaccttt
tcgaattatcataaattacgtcacgaacatcaattgcctcgttttgaaat
tattgccaaggtgattaactcccagcggatttcaTTAAAagtactttcta
ttcataaaaaaatcatttaatgtctcaaggaaTATAattaccatggtaat
tgtttgaatacgaggcaagtgatgatGTTCGtggcgtaatttatgaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011186XLOC_011186Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019867-exon-sc0000339-1491911889:165971..166382TCONS_00019867-exon-sc0000339-1491911889:165971..166382Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:165971..166382TCONS_00019867-exon-sc0000339-1510915933:165971..166382Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:165971..166382TCONS_00019867-exon-sc0000339-1575043694:165971..166382Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:166899..167041TCONS_00019867-exon-sc0000339-1491911889:166899..167041Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:166899..167041TCONS_00019867-exon-sc0000339-1510915933:166899..167041Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:166899..167041TCONS_00019867-exon-sc0000339-1575043694:166899..167041Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:167295..167342TCONS_00019867-exon-sc0000339-1491911889:167295..167342Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:167295..167342TCONS_00019867-exon-sc0000339-1510915933:167295..167342Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:167295..167342TCONS_00019867-exon-sc0000339-1575043694:167295..167342Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:167452..167527TCONS_00019867-exon-sc0000339-1491911889:167452..167527Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:167452..167527TCONS_00019867-exon-sc0000339-1510915933:167452..167527Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:167452..167527TCONS_00019867-exon-sc0000339-1575043694:167452..167527Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:167684..167757TCONS_00019867-exon-sc0000339-1491911889:167684..167757Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:167684..167757TCONS_00019867-exon-sc0000339-1510915933:167684..167757Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:167684..167757TCONS_00019867-exon-sc0000339-1575043694:167684..167757Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:167902..168018TCONS_00019867-exon-sc0000339-1491911889:167902..168018Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:167902..168018TCONS_00019867-exon-sc0000339-1510915933:167902..168018Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:167902..168018TCONS_00019867-exon-sc0000339-1575043694:167902..168018Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:168289..168379TCONS_00019867-exon-sc0000339-1491911889:168289..168379Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:168289..168379TCONS_00019867-exon-sc0000339-1510915933:168289..168379Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:168289..168379TCONS_00019867-exon-sc0000339-1575043694:168289..168379Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:168512..168575TCONS_00019867-exon-sc0000339-1491911889:168512..168575Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:168512..168575TCONS_00019867-exon-sc0000339-1510915933:168512..168575Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:168512..168575TCONS_00019867-exon-sc0000339-1575043694:168512..168575Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:168796..168860TCONS_00019867-exon-sc0000339-1491911889:168796..168860Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:168796..168860TCONS_00019867-exon-sc0000339-1510915933:168796..168860Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:168796..168860TCONS_00019867-exon-sc0000339-1575043694:168796..168860Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:169571..169631TCONS_00019867-exon-sc0000339-1491911889:169571..169631Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:169571..169631TCONS_00019867-exon-sc0000339-1510915933:169571..169631Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:169571..169631TCONS_00019867-exon-sc0000339-1575043694:169571..169631Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:169801..169882TCONS_00019867-exon-sc0000339-1491911889:169801..169882Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:169801..169882TCONS_00019867-exon-sc0000339-1510915933:169801..169882Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:169801..169882TCONS_00019867-exon-sc0000339-1575043694:169801..169882Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:169960..170048TCONS_00019867-exon-sc0000339-1491911889:169960..170048Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:169960..170048TCONS_00019867-exon-sc0000339-1510915933:169960..170048Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:169960..170048TCONS_00019867-exon-sc0000339-1575043694:169960..170048Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:170141..170202TCONS_00019867-exon-sc0000339-1491911889:170141..170202Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:170141..170202TCONS_00019867-exon-sc0000339-1510915933:170141..170202Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:170141..170202TCONS_00019867-exon-sc0000339-1575043694:170141..170202Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:170291..170371TCONS_00019867-exon-sc0000339-1491911889:170291..170371Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:170291..170371TCONS_00019867-exon-sc0000339-1510915933:170291..170371Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:170291..170371TCONS_00019867-exon-sc0000339-1575043694:170291..170371Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:170564..170669TCONS_00019867-exon-sc0000339-1491911889:170564..170669Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:170564..170669TCONS_00019867-exon-sc0000339-1510915933:170564..170669Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:170564..170669TCONS_00019867-exon-sc0000339-1575043694:170564..170669Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:170958..171154TCONS_00019867-exon-sc0000339-1491911889:170958..171154Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:170958..171154TCONS_00019867-exon-sc0000339-1510915933:170958..171154Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:170958..171154TCONS_00019867-exon-sc0000339-1575043694:170958..171154Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:172115..172185TCONS_00019867-exon-sc0000339-1491911889:172115..172185Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:172115..172185TCONS_00019867-exon-sc0000339-1510915933:172115..172185Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:172115..172185TCONS_00019867-exon-sc0000339-1575043694:172115..172185Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1491911889:172524..176170TCONS_00019867-exon-sc0000339-1491911889:172524..176170Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1510915933:172524..176170TCONS_00019867-exon-sc0000339-1510915933:172524..176170Clytia hemisphaericaexon
TCONS_00019867-exon-sc0000339-1575043694:172524..176170TCONS_00019867-exon-sc0000339-1575043694:172524..176170Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000339supercontigsc0000339:165971..176170 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.271322	0	0	0	0.103415	0.110744	0	2.24349e-10	2.07338e-08	0.704108	0.117396	0	0	0.0783807	0	0.159253	0.15061	6.91947e-10	0	0	0.893328	0.814557	0	0.128335	2.96288e-08	0.406002
Blast
[Close]
BLAST of TCONS_00019867 vs. Swiss-Prot (Human)
Match: TPTE2 (Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 OS=Homo sapiens GN=TPTE2 PE=1 SV=2)

HSP 1 Score: 335.495 bits (859), Expect = 3.515e-100
Identity = 182/424 (42.92%), Postives = 271/424 (63.92%), Query Frame = 2 
Query:  683 YSYATLAIVSYFMLELMLRIFAWG-EEFFHHRLEVIDMIIVVLSXXXXXXXXXXXXDQHL-----KFGKLIIVFRLLRILMLSRICVGRKHLERSTRNLISQNKRRYVKDGFDLDLTYITDRMIAMSFPSSGKTSMYRNPISEVARFFNTKYPGHYKIYNLCSERHYETHWFNDSVERVLIDDHNVPRLSQLVQFVHSADEWMKKDEQNMLVLHCKGGKGRTGTAVAAWLLFSGQFKSADKALNYFGIRRTDEAKGNKYQGVETPSQSRYVRYLEKVIYSMNGRLPQPKQLRIKSVKITGLKTVGNGDGSDLSVEIVQNGQIIHKVVFNEP--GTNFLKTKGDSLKVIFNEKDNLMVVGDTKVRFHSSNTSVPKDYDFCAFFFWFHTSFIENKRFYVERNDIGNCHKRKYWKTYTEKFSVTVKF 1930
            Y   +LAI  +F+++++LR+F  G +++F     ++D  I+V+  +  +++     D  L     ++  L+ + RL+ ++ +  +   ++ LE+  R L+S+NKRRY +DGFDLDLTY+T+R+IAMSFPSSG+ S YRNPI EV RF + K+  HY++YNLCSER Y+   F++ V R++IDDHNVP L ++V F    +EWM +D +N++ +HCKGGKGRTGT V A L+ S  F +A+++L YFG RRT++   NK+QGVETPSQ+RYV Y  +V +  N  LP  + L IK   I  ++    GD  DL V++V       KVVF+    G   +    ++ K++ N  D   +  D KV+F SSN  +PK YD C FFFWF+TSFI+N R  + RN++ N HK+K WK Y  +F+V + F
Sbjct:  108 YRSISLAIGLFFLMDVLLRVFVEGRQQYFSDLFNILDTAIIVIPLLVDVIYIFF--DIKLLRNIPRWTHLVRLLRLIILIRIFHLLHQKRQLEKLMRRLVSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIEEVVRFLDKKHRNHYRVYNLCSERAYDPKHFHNRVSRIMIDDHNVPTLHEMVVFTKEVNEWMAQDLENIVAIHCKGGKGRTGTMVCALLIASEIFLTAEESLYYFGERRTNKTHSNKFQGVETPSQNRYVGYFAQVKHLYNWNLPPRRILFIKRFIIYSIR----GDVCDLKVQVVMEK----KVVFSSTSLGNCSILHDIETDKILINVYDGPPLYDDVKVQFFSSN--LPKYYDNCPFFFWFNTSFIQNNRLCLPRNELDNPHKQKAWKIYPPEFAVEILF 519
The following BLAST results are available for this feature:
BLAST of TCONS_00019867 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TPTE23.515e-10042.92Phosphatidylinositol 3,4,5-trisphosphate 3-phospha... [more]
back to top