TCONS_00019870 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019870
Unique NameTCONS_00019870
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5467

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019870 ID=TCONS_00019870|Name=TCONS_00019870|organism=Clytia hemisphaerica|type=transcript|length=5467bp
tcgagATTTCAAGGAAggaataacaaaattttatgATATTAAGATATTTT
TGTAGCTCAATGATAAATTTGTTTATTAATTCCTCAAGGGGTGTTGCTGA
ATCTAAATGATCCACTAAAAATAACTTCATTGGtgtaattgaaaaataaa
atctctaATGATAATTTAGCTATGACTGAAGAAAGGAGAAGGACTTTAag
ctttctaaaaaaaaaacaaagatctgATGAAAATTTGTTGATTTATGAAG
AAGATAATTGGAAgtttgaagatgaagaagaagaacaacCCATACCTAAT
CATGGTTCTGTAGATTCGAGTGTAACATCAAATCAAGAAAGTTTGGCAGG
CGATTCTATTCAAAAAGAAAGTGATGTGGAGAATGATAATGATtCTGCAT
CATTCTCAGCTAGCACAGGTCAAGTGAAAGTGAGCATCGAAGAAGAGGAA
GAAGGGGAACCGGAACTCTTTGTGGATCCAACACTTTCCACATCTAAACA
GAAAGCTCATGTGTGGGACCTCGACACTAAAACAGGGAGGATAAAGTTCA
AAATCCACTTGGTTGTTGATCATTTAGCAGCAAGATTATTCAGTGTGTTG
CTAGTATGTATTGATATCGTGTTGGTGATCATAGCTTTGGGTACAGAAGA
TGATTCTGAgGGTTATTCATATGCGACACTAGCCATTGTATCATACTTCA
TGTTGGAATTGATGCTTCGTATCTTTGCATGGGGGGAGGAATTTTTCCAT
CATCGCTTGGAGGTGATCGACATGATAATCGTGGTGCTTAGTTTCATCAC
CACTATCGTTTTTGAAGTTATCACTATCGATCAGCATCTTAAGTTTGGAA
AGTTGATCATCGTGTTCCGTCTGCTGAGGATTTTGATGTTGTCTCGTATC
TGTGTCGGCCGAAAACACCTTGAACGATCCACCAGAAATTTGATCTCTCA
AAACAAAAGGCGTTACGTGAAGGATGGTTTCGATCTTGATTTGACTTACA
TCACAGaccgAATGATTGCCATGTCCTTCCCATCGTCAGGAAAAACGTCA
ATGTATCGAAACCCTATTTCTGAAGTGGCAAGATTTTTCAACACTAAATA
TCCTGGTCATTACAAGATTTACAATCTATGCAGTGAGCGCCATTATGAAA
CACATTGGTTCAACGACAGTGTGGAAAGGGTTCTGATTGATGACCATAAT
GTACCAAGGCTGAGtcaATTGGTACAATTTGTACACAGTGCAGATGAGTG
GATGAAGAAAGATGAACAGAATATGTTGGTCTTGCATTGCAAAGGAGGAA
AAGGTCGCACAGGGACAGCAGTAGCAGCATGGTTATTATTCTCTGGACAA
TTCAAATCTGCTGACAAAGCATTGAATTACTTTGGCATCCGAAGGACAGA
CGAAGCTAAAGGGAATAAGTACCAAGGTGTTGAAACGCCGAGTCAGAGTC
GATACGTGCGCTACTTAGAGAAGGTGATTTACTCTATGAACGGACGTCTA
CCCCAACCCAAACAATTACGCATCAAAAGTGTCAAAATAACTGGCTTGAA
AACCGTTGGCAATGGGGATGGTAGCGACTTGAGTGTGGAGATTGTCCAAA
ATGGTCAGATCATTCATAAAGTGGTGTTCAATGAACCAGGAACCAACTTT
TTGAAAACGAAGGGGGATTCTTTGAAAGTTATCTTCAACGAGAAAGACAA
CTTGATGGTTGTCGGCGATACAAAAGTTCGATTCCATTCTTCAAATACTa
GTGTTCCAAAGGATTACGATTTTTGTGCATTCTTCTTTTGGTTTCACACA
AGCTTCATTGAAAATAAAAGGTTTTACGTTGAGCGAAACGACATAGGGAA
TTGCCATAAGCGGAAATACTGGAAGACGTACACGGAGAAGTTTTCGGTCA
CCGTCAAATTTGTTGACCCCGATGAAAGCAAATAAACAAGGGAGTATCAT
TTTAGAGGCAATTTATGGAATTAAATTTAGAGGACACaccttatatatat
ttttaaccattttcctGTTATTTTCTGTTTATTTTCTGCTATGTTTTTTA
TTAGAGATAAttttatatgaaaatattttgatataattGCCCATGCTTTA
CAAAACAATACGTACCTTGGAGCCTGGATgagcaagtgaaaaaaagtata
aatttatTATCGGAGCCTTTTCTAACGGTAAGTTTCTAAGTGATTTATTA
TCAGAACGATCTATACTAGCTATActgatacacccctgtctcacagcgcC
GGTAGAACTCTTTCCCCGGTGGgaattcccaatggggatagaaatattaT
TGTTCCAATGCTAGAaaatccatttttggagtgcaatttttaagcattga
atttcgaatggggatgaagtCAATAGCGCTCCACATCCCACACATAATCa
cgattgaaaatttttttctttctctttcccCACCGGAGACaagatttttg
ccaaattttccaggggCTGAgatcccagcgggtctgtgacacaggggtgt
gtgtactgatctattttttatttcacttttgcATTAGAGGTTGTATTTTT
TTCTGTCAAAAATTGTTCCATTTGAACGATATCCTTCCTACATTTTAGAG
GAGCTTTTTTTGATTCCCTTTCCTTGGAAAGTTTCTCTCAATCCTCactt
ataatattttttatattcatttttgtttttgctatCTATCTCTTTGAACA
CAAACTTAGCACGTGCCCTTTTATTGTCAAACTTCTTGGCTTTGCATAAC
AATTAgacaatttttctaaaatttttcgTCGACTAGGGGTCCTAGCTcct
tctgatatagaaatacTAAGATATGTTGTTCTTTACCCAAAGGAGCTGTT
CGAGTCGAAAATAGAGTTATCTTaatacacctccttctcacagacccgct
gggaacccttcccactggaataATAGGCTAATCAAAATACGAAAAAACTC
ACTAGTCTATTAcattttcgtccgtcgtcgtgattttgccgatttactta
acctcactatggAATTCAAATCTCAATCCATAAAAGGGAATATtgatccc
catcgagttttggtccgttatttttacacCCATTGGTTGATAAAACttca
ccgggtctgtgaaagAAGGGGGTGTCTTAATCCGATGGTCCCTTTGGACT
ATAGCTTTTTTTTATGATAGGATAgaatagaaattaaaaatttaaatatt
aatATAAATAGAACGCAAAATTGTATCAATGGTGGGgtaaaaatagaatt
tcttgatctttgaaaattttatatttgattgtaaattgaaattgtaAAAT
CTTGTggctaaagatttttttatgaattacgCAAACATTTGAGCATGTAT
TAAAATTTCTACTCTATAACAGTAAGGGAGAGGCCACACCTTTGAACTTC
TTTGTAGTACTGAACAGTCGGACAGGACAGAATATATGATAGGCATGCAG
CAGCCGTTTGAAATCTTGTTCCCAGTTCTCTATTCATTTTTTGCGATTGA
AAGTTGGTCAATATAACATATTTTCTGTTTCGATCTTCCTCTTTGATTGA
AAGAACATAAAACGAAATTGTAATCCTTTCTTCCCACACATCAGATGGTC
CCAGACAACTTCCTTATAAAAGTTCACGAGGAGCGGAAACCTCAAATCGC
TTACCGAGATAATTCGAACAAACCTTAAGCTTAAGTAAGAAAACAATCGA
TCAACGAGGAGAGAAGACAGACAGAGAGTAAGAAGAGGATGTTGAATGTG
ACACACAACATGACGACTTGGAGCAACACCACCTTACCTCAGGTGAGCGA
CCGACCTTTGGAGATGATCATCCCACTAATGTTGTCTTGTGTGGTGGCTG
TCCTCGCCAATAGTTTCGTATGCTTTCTCATACTACGTGTTGAAAGATTG
AGAAGTGCCACTAACGTTTTTGTATTCAGCCTATGTTTATGTGACATCCT
GTTTGCTGGCGTGCTTCTCCCCATGCATTGTTTCTACCAACACGACTTGG
TGTACCAATTCTTGACGCTCATCACCGTCCTCATCTATATAGTCAACATG
GCGTGCACTACGTTCGAACGCTTGATTTGCATCACCAAACCCATGCGCTA
CTTGACCTATTTGACCAAAACTAAAGCCATTCGAATCGTTATTACAGCAT
GGATTTTTCCTGCTTTATATTGCTGCATACCTTTGTCATGGCATAACAAC
ACACAGATTCTGATCCACAAACTTTATCTTGTGTTCAGTCTGTTGGTCTT
TCTTCTCCTCCCTTTTGTATTCATCGCGTATGTTTACATCAGAATTTGTG
GCGAGATCAAACGCCTCAACAGACACAACCCGCACAACTCTTCCTCTCTC
AGTGAACAACTACGTTCCTCAAAAAGAAAGTGCTCTTTAGCCAGCATCAC
TTCGTGTCTTCTGGTGAAGCGGGACAGTACAGTAGATAAGGACAAGATTC
AAGTGGACTTGTGCACAGACGATCGCTCCTCAGATTGCACCTCAATCACC
TCAACAGAGATTACTAGCACCTCAGATCGACGCACAAGTTTCAATAAGAA
ACCAACAGCCGTGCGCTCCAAGAAAAGCAAAAAGTCCTCTCGATCTAAGA
AGAAGAAAGAGATTCGAGCTTCCTTACCATTCGCCATAACGACTTTCATG
TACATGTTTACGTGGCTCCCCGTTATCTATTTGACTATTCTCGATACAAT
CGACAGATTGGATCTAGCACCAATGATCCTATTACACTTCTCCATCTTCG
CAATTGCACTGAATGCAGTCTGTGTACCCTTCATCTATGGATTGTTACTT
CCAGGCTTCCGATTGACTTTATTCCGTATGTTCACAAAGCAAAAGTGATT
TAGTGAATTTTTTGTGAATTTCATGAGGATgtttttatttggaatttaaa
GAACTAGGTATTTGAATTATTTAAATTGCATGCTGAAAATCTTTATATTT
ANGaggatatttttatttggaatttaaaGAACTAGGTATTTGAATTATTT
AAATTGCATGCTGAAAATCTTTATATTTAATGATTATCTACCATTGTTAA
ATATTGAAAGAGGTATGCTCAGTCATATACTACTCTCAATATAGTTTCAG
CgataaaagactttaaaaaaaaattatttgcaaaCGCTGCTTCGACAGTT
GTCGGTTATTTTTTACAAATCATTAGATCATTACTTAGTTGAAACcgaaa
atatataatttcaaaagAGGCGTAATGCATACGCAGAATATGAAAATCTA
Cgttcaaatagaccttttcgaattatcataaattacgtcacgaacatcaa
ttgcctcgttttgaaattattgccaaggtgattaactcccagcggatttc
aTTAAAagtactttctattcataaaaaaatcatttaatgtctcaaggaaT
ATAattaccatggtaattgtttgaatacgaggcaagtgatgatGTTCGtg
gcgtaatttatgaaaat
Run BLAST on NCBI

transcript from alignment at sc0000339:166083..176170+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019870 ID=TCONS_00019870|Name=TCONS_00019870|organism=Clytia hemisphaerica|type=transcript|length=10088bp|location=Sequence derived from alignment at sc0000339:166083..176170+ (Clytia hemisphaerica)
tcgagATTTCAAGGAAggaataacaaaattttatgATATTAAGATATTTT
TGTAGCTCAATGATAAATTTGTTTATTAATTCCTCAAGGGGTGTTGCTGA
ATCTAAATGATCCACTAAAAATAACTTCATTGGtgtaattgaaaaataaa
atctctaATGATAATTTAGCTATGACTGAAGAAAGGAGAAGGACTTTAag
ctttctaaaaaaaaaacaaagatctgATGAAAATTTGTTGATTTATGAAG
AAGATAATTGGAAgtttgaagatgaagaagaagaacaacCCATACCTAAT
GTAAATATATTATTTCTTAACTTCCAACCTTTATATTTGTTTCAAAACCT
AGGAGTCCCAAGCCCTACTAACATCTTTTAGAACAGCCTACTAACAAATT
CAATTAAATTTTAGCATGGTTCTGTAGATTCGAGTGTAACATCAAATCAA
GAAAGTTTGGCAGGCGATTCTATTCAAAAAGAAAGTGATGTGGAGAATGA
TAATGATGTAAATAAACTTATTTTGAAAGCAGAATATTTCAGAACTCATT
TTAAGCATGTTTGCAATGACCAGTTGATCAATTACTAACAAAATATGATA
ATTTTTAACCTTTCTTAAAGCACTAATAACAGAAATTTCACATGCGTGTT
TATTATCTTATTCCCTTAAAATCTGAATgcttaaaaaatcattttcgatt
tcagtCTGCATCATTCTCAGCTAGCACAGGTCAAGTGAAAGTGAGCATCG
AAGAANTCGTGTTTATTATCTTATTCCCTTAAAATctgaatgcttaaaaa
tcattttcgatttcagtCTGCATCATTCTCAGCTAGCACAGGTCAAGTGA
AAGTGAGCATCGAAGAAGAGGAAGAAGGGGAACCGGAACTCTTTGTGGAT
CCAACACTTTCCACATCTAAACAGAAAGCTCATGTGTGGGACCTCGACAC
TAAAACAGGGTATGCCCATCACTTAGTCATATTGATAAACTAGCTAGCTA
TAGAAATACAAAGAACTAAAGTTTCTGGTCAGTAGTAAATAAACACTGGA
GTTCAGNCCATCACTTAGTCATATTGATAAACTAGCTAGCTATAGAAATA
CAAAGAACTAAAGTTTCTGGTCAGTAGTAAATAAACACTGGAGTTCAgta
aatatattttcttaaaaaacgtCACTTTACAAAATTATAAACTgttcaaa
tttgaatttcagGAGGATAAAGTTCAAAATCCACTTGGTTGTTGATCATT
TAGCAGCAAGGTAGGTTTACTTCGTATCTTTCCCTGGAATCTTCTGAGCC
TTATATCCAGCTAACTACCACCGAATAACGTAGAACTTCTATTAAGAATA
CTTTTTACCTTTTCACTAGATTATTCAGTGTGTTGCTAGTATGTATTGAT
ATCGTGTTGGTGATCATAGCTTTGGGTACAGAAGATGATTCTGAggtaaa
aaaagaatatttcttgcgtgtaaaaatgcactgaccACTATTTTATTCAT
TCGACAAGCtttcatcttttaaaaattcttttgtacAGCTTTGTGCTTTA
TGTTATGTTTGATATTGAATCCGAATGAAGGATGAGATTATTCTTTTTCA
GGGTTATTCATATGCGACACTAGCCATTGTATCATACTTCATGTTGGAAT
TGATGCTTCGTATCTTTGCATGGGGGTATTCAATAATGTTTTCCTTTTGA
TATTTTTTGAATTTGAAAAGGTTAAACAAATAGTGCTTGAATAAAGGTTT
TTTGAAAAGGTATGTAAACAGGTGATATAAATAAACAATTCATATGGTAA
AATGTCCCTTCTTTTTCAGGGAGGAATTTTTCCATCATCGCTTGGAGGTG
ATCGACATGATAATCGTGGTGCTTAGTTTCATCACCACTATCGTTTTTGA
AGTTATCACTATCGATCAGCATCTTAAGTTTGGAAAGTAAGAGAAAACCT
TTCCAATCGTATGTGGATTTTGATTATTAACAACGCCCTAATAATATCTA
AAACTAGGTGAAGGTTCTTGTTAACAGTAAAAAGTGCTCTCCCAGAAAGA
GCCTTATAGCAACATCAAAACTTCTGGAGTTCTATTTATAGCAATACCTT
CAAAATTTGTTCTTCCTTCTTTCTATGATGTTCTTAAACTCTCCATTTTC
TATAACATTTGTAAATACAATCAAGGGATGATATTTTATAATCTTCTCTT
TTATAGGTTGATCATCGTGTTCCGTCTGCTGAGGATTTTGATGTTGTCTC
GTATCTGTGTCGGCCGAAAACACCTTGAACGATCCACCAGAAATTTGGTA
TCTTGATTAATATCACCattatttagatatttttttaatttagtggCCAG
CGACCACTATACTGTCATTAGCTTGACCATTTTCTTGATAATGAaccttt
gtttaaaaaaaacttaaaccTTTGTTTAGATCTCTCAAAACAAAAGGCGT
TACGTGAAGGATGGTTTCGATCTTGATTTGACTTACATCACAGGTGAGAA
AACTTGACCTTCATCTTCACTCACCACCGAATCTATCAACGGCAACTTAT
CCACATATATCTTGTCATTCTTGTAATGAGCACGGGTGGATTCGATTTGA
TTTNATCTTCACTCACCACCGAATCTATCAACGGCAACTTATCCACATAT
ATCTTGTCATTCTTGTAATGAGCACGGGTGGATTCGATTTGATttgatct
tttaatttttcagaccgAATGATTGCCATGTCCTTCCCATCGTCAGGAAA
AACGTCAATGTATCGAAACCCTATTTCTGTACGTCaactttttatttcta
ttcggatactggttttatttttacacccctTCTGACAGACCCACTGGTAC
actttcccactggaaaatttggccaaatcATCGTCCACGGTAAAATCATC
CTCcagtttttgtccccactgataataatcaaataaaccaatcctcactg
ccaaatatttacttttttcccatccccactgaattttctgactaaaaaaa
aactaaagaaatgaaaaatatggaATATCAATTTACATCGAGTTTTCTGT
TAttcttatccccactggctgaaaaaaatcctatCGGGTTTTTGAGAAGG
GGGTGACTTATTTAGAGACTTTGAaaaccttaagggaagaaattttggcg
taAAGAAAGTTTGGCAGATTTGGCGGTTTTGGTCAAAATCCGCCTAAATT
TATATTACTGCATTTAATTTATTCTGCTAAttgtgtgctatttcaggcct
taaaacaggtttttccttATTTAATGGCGGTTTTTGAGCAAAAAGTTTCC
TTCATCCGCCAAActaaatcctcgccaaatttaatttttcaagccatCCG
CCAAACTGAAAAAACGTCTTCGGCGATTCCCTAAATcaaattcccgcaaa
aatttcttcccttaataAGGTATTTCAACCATCAAGAATATTTTCTATGT
CTCGTCTGATAAACTTTTTCCAATACCACTTCTTTCAGGAAGTGGCAAGA
TTTTTCAACACTAAATATCCTGGTCATTACAAGATTTACAATCTATGCAG
TAAGTAACTGTTATTAATATTCTTCTCCGAGAAATCGATTGTACANTAAG
ATTTACAATCTGTGCAGTAAGTAACTGTTATTAATATTCTTCTCCGAGAA
ATCGATTGTACaaagtgaaataaaatatttcagttttctTTTTCCCGACT
TTGTTCTTTTAATATCAGGTGAGCGCCATTATGAAACACATTGGTTCAAC
GACAGTGTGGAAAGGGTTCTGATTGATGACCATAATGTACCAAGGCTGAG
GTAACAAACATTTAATAGCCTTTATTAAATCTTCATTGTAGAATGtcaca
tatttatttttgaaattttattttcagtcaATTGGTACAATTTGTACACA
GTGCAGATGAGTGGATGAAGAAAGATGAACAGAATATGTTGGTCTTGCAT
TGCAAAGGAGGAAAAGGTACCTAATTGTTCAATGTTTGGGAACCGTATGA
TAATGCGCTCTTAATATTTCTATATAACATAATACAATTTACATTTTTCA
TCCTTCAGGTCGCACAGGGACAGCAGTAGCAGCATGGTTATTATTCTCTG
GACAATTCAAATCTGCTGACGTaagcaattttctttttaaaagaatcagt
caacaacttttttgaattttgctgCATTCGTAAAAATgttcttcttctct
tttttcaGAAAGCATTGAATTACTTTGGCATCCGAAGGACAGACGAAGCT
AAAGGGAATAAGTACCAAGGTGTTGAAACGCCGAGTCAGGTGAGTTGAAT
CGtttctttttgtttgaagttaTAGCCAAGACAAACGTTTTTGTGTACTT
CACAGAGACAAATCTCAAAACTTATAAGTTAAACAATGATTTGGCCAGGG
TGCTTTTTAGTCAACTTGGTTATGTTCTTCGTTATGTATCTTCTTCGCAC
TACTgtaaattttttcttcattccACATTAGAGTCGATACGTGCGCTACT
TAGAGAAGGTGATTTACTCTATGAACGGACGTCTACCCCAACCCAAACAA
TTACGCATCAAAAGTGTCAAAATAACTGGCTTGAAAAGTAAGCTCTTCTG
TCTTTTGTTCTTCCTGCATTTGTCTTTCCCAAAAAATTTAACCCGAGCTT
ATCGAATCTCAACAATGTTCCCAGCTTCTTGCTGCTTGCTGATGGGCGCC
ATATAACACTTAGTAACGTAACAAAGCCTGCATGGGAACGAGGGTAATGG
AATCCTCATTATTTGAAGTTTCGAAAACTTTGTCCAACCGACGAAGCTAG
ATTGGCCTAATAAAATGTCCCTGGAAGGTGAAaacttttcaatgattttc
atattttattctTTGTGAACTGTAGCCGTTGGCAATGGGGATGGTAGCGA
CTTGAGTGTGGAGATTGTCCAAAATGGTCAGATCATTCATAAAGTGGTGT
TCAATGAACCAGGAACCAACTTTTTGAAAACGAAGGGGGATTCTTTGAAA
GTTATCTTCAACGAGAAAGACAACTTGATGGTTGTCGGCGATACAAAAGT
TCGATTCCATTCTTCAAATACTGTAAGTGTCTTTGTCTTTGAATcaagtc
aaaagttatgatcaattgaataaaaaagttactttcagaaagtgctcgaa
atcgatgaaaatcgacctatcagatttttattttaagattggcaatcgca
atagcctccacatgattaagagcattttgtAGTAATTTAAGACATACATT
TTTAACtaagcaaaaaagtatactGCAACAATTCGTGTACTCAAACATGT
AAGGAAATACTTTTTGAAGTTCAAAATTAAGTAAAGCacgattgacgtca
aaatgtGTCCAAAACGTAACAGATTCCACAggatttcaaactttaaatNC
AAAAGTTATgatcaattgaataaaaaagttactttcagaaagtgctcgaa
atcgatgaaaatcgacctatcagatttttattttaagattggcaatcgca
atagcctccacatgattaagagcattttgtAGTAATTTAAGACATACATT
TTTAACtaagcaaaaaagtatactGCAACAATTCGTGTACTCAAACATGT
AAGGAAATACTTTTTGAAGTTCAAAATTAAGTAAAGCacgattgacgtca
aaatgtGTCCAAAACGTAACAGATTCCACAggatttcaaactttaaatga
CCATATCTTTTTGTGTGTTTGAGTATAAGACTTGTCGTATAatacttttt
tgctcagaatttcatgttcTATCCGATGGTATCAGTCATATTTCCGTTTG
ATTTGACTTTAAGGGTCGCCCCCCTACTAAATGAATTATTAcaaattttc
gcaaattttcctcgCTTCTTGAttaactttcgttttcatgAGAACAGCAG
AGTTTAAAAGAATGTAGGTACCTGGATTTATAAACGTTCAGATTCATGAA
TTGTGGGCCATTGTGAGTCGAATGAGCAAGCCTTAATATTAATTCAAATG
ACTGATTTGTTccatcattttcgatttttcagaGTGTTCCAAAGGATTAC
GATTTTTGTGCATTCTTCTTTTGGTTTCACACAAGCTTCATTGAAAATAA
AAGGTATCAACGTCTGACCATTTTTTCTTCTAGTTGATGAAGCTAACAAA
TCATAAGAATTGAGATACCATTATATAAAAGCCCAAATTAATATAGGTTG
CTGGCTTCCACTAACGCATTCGTGCTTCTTTACTATCAGCGGTTTtttag
aggtctgtgattccgGCTAAAATTATTAATGATCTTATAAGTTTTCGCGT
AAAAGCTTTTTATGTCAATTAGTGGAATACAGGCTCATTATCGAAAAACG
CTCGATTNCAAAATCTTTTTATGTCAATTAGTGGAATACAGGTTCATTAT
CGAAAAACGCTCTTTAATCAATAAGATTTTTATTTCTTAAGGTTTTACGT
TGAGCGAAACGACATAGGGAATTGCCATAAGCGGAAATACTGGAAGACGT
ACACGGAGAAGTTTTCGGTCACCGTCAAATTTGTTGACCCCGATGAAAGC
AAATAAACAAGGGAGTATCATTTTAGAGGCAATTTATGGAATTAAATTTA
GAGGACACaccttatatatatttttaaccattttcctGTTATTTTCTGTT
TATTTTCTGCTATGTTTTTTATTAGAGATAAttttatatgaaaatatttt
gatataattGCCCATGCTTTACAAAACAATACGTACCTTGGAGCCTGGAT
gagcaagtgaaaaaaagtataaatttatTATCGGAGCCTTTTCTAACGGT
AAGTTTCTAAGTGATTTATTATCAGAACGATCTATACTAGCTATActgat
acacccctgtctcacagcgcCGGTAGAACTCTTTCCCCGGTGGgaattcc
caatggggatagaaatattaTTGTTCCAATGCTAGAaaatccatttttgg
agtgcaatttttaagcattgaatttcgaatggggatgaagtCAATAGCGC
TCCACATCCCACACATAATCacgattgaaaatttttttctttctctttcc
cCACCGGAGACaagatttttgccaaattttccaggggCTGAgatcccagc
gggtctgtgacacaggggtgtgtgtactgatctattttttatttcacttt
tgcATTAGAGGTTGTATTTTTTTCTGTCAAAAATTGTTCCATTTGAACGA
TATCCTTCCTACATTTTAGAGGAGCTTTTTTTGATTCCCTTTCCTTGGAA
AGTTTCTCTCAATCCTCacttataatattttttatattcatttttgtttt
tgctatCTATCTCTTTGAACACAAACTTAGCACGTGCCCTTTTATTGTCA
AACTTCTTGGCTTTGCATAACAATTAgacaatttttctaaaatttttcgT
CGACTAGGGGTCCTAGCTccttctgatatagaaatacTAAGATATGTTGT
TCTTTACCCAAAGGAGCTGTTCGAGTCGAAAATAGAGTTATCTTaataca
cctccttctcacagacccgctgggaacccttcccactggaataATAGGCT
AATCAAAATACGAAAAAACTCACTAGTCTATTAcattttcgtccgtcgtc
gtgattttgccgatttacttaacctcactatggAATTCAAATCTCAATCC
ATAAAAGGGAATATtgatccccatcgagttttggtccgttatttttacac
CCATTGGTTGATAAAACttcaccgggtctgtgaaagAAGGGGGTGTCTTA
ATCCGATGGTCCCTTTGGACTATAGCTTTTTTTTATGATAGGATAgaata
gaaattaaaaatttaaatattaatATAAATAGAACGCAAAATTGTATCAA
TGGTGGGgtaaaaatagaatttcttgatctttgaaaattttatatttgat
tgtaaattgaaattgtaAAATCTTGTggctaaagatttttttatgaatta
cgCAAACATTTGAGCATGTATTAAAATTTCTACTCTATAACAGTAAGGGA
GAGGCCACACCTTTGAACTTCTTTGTAGTACTGAACAGTCGGACAGGACA
GAATATATGATAGGCATGCAGCAGCCGTTTGAAATCTTGTTCCCAGTTCT
CTATTCATTTTTTGCGATTGAAAGTTGGTCAATATAACATATTTTCTGTT
TCGATCTTCCTCTTTGATTGAAAGAACATAAAACGAAATTGTAATCCTTT
CTTCCCACACATCAGATGGTCCCAGACAACTTCCTTATAAAAGTTCACGA
GGAGCGGAAACCTCAAATCGCTTACCGAGATAATTCGAACAAACCTTAAG
CTTAAGTAAGAAAACAATCGATCAACGAGGAGAGAAGACAGACAGAGAGT
AAGAAGAGGATGTTGAATGTGACACACAACATGACGACTTGGAGCAACAC
CACCTTACCTCAGGTGAGCGACCGACCTTTGGAGATGATCATCCCACTAA
TGTTGTCTTGTGTGGTGGCTGTCCTCGCCAATAGTTTCGTATGCTTTCTC
ATACTACGTGTTGAAAGATTGAGAAGTGCCACTAACGTTTTTGTATTCAG
CCTATGTTTATGTGACATCCTGTTTGCTGGCGTGCTTCTCCCCATGCATT
GTTTCTACCAACACGACTTGGTGTACCAATTCTTGACGCTCATCACCGTC
CTCATCTATATAGTCAACATGGCGTGCACTACGTTCGAACGCTTGATTTG
CATCACCAAACCCATGCGCTACTTGACCTATTTGACCAAAACTAAAGCCA
TTCGAATCGTTATTACAGCATGGATTTTTCCTGCTTTATATTGCTGCATA
CCTTTGTCATGGCATAACAACACACAGATTCTGATCCACAAACTTTATCT
TGTGTTCAGTCTGTTGGTCTTTCTTCTCCTCCCTTTTGTATTCATCGCGT
ATGTTTACATCAGAATTTGTGGCGAGATCAAACGCCTCAACAGACACAAC
CCGCACAACTCTTCCTCTCTCAGTGAACAACTACGTTCCTCAAAAAGAAA
GTGCTCTTTAGCCAGCATCACTTCGTGTCTTCTGGTGAAGCGGGACAGTA
CAGTAGATAAGGACAAGATTCAAGTGGACTTGTGCACAGACGATCGCTCC
TCAGATTGCACCTCAATCACCTCAACAGAGATTACTAGCACCTCAGATCG
ACGCACAAGTTTCAATAAGAAACCAACAGCCGTGCGCTCCAAGAAAAGCA
AAAAGTCCTCTCGATCTAAGAAGAAGAAAGAGATTCGAGCTTCCTTACCA
TTCGCCATAACGACTTTCATGTACATGTTTACGTGGCTCCCCGTTATCTA
TTTGACTATTCTCGATACAATCGACAGATTGGATCTAGCACCAATGATCC
TATTACACTTCTCCATCTTCGCAATTGCACTGAATGCAGTCTGTGTACCC
TTCATCTATGGATTGTTACTTCCAGGCTTCCGATTGACTTTATTCCGTAT
GTTCACAAAGCAAAAGTGATTTAGTGAATTTTTTGTGAATTTCATGAGGA
TgtttttatttggaatttaaaGAACTAGGTATTTGAATTATTTAAATTGC
ATGCTGAAAATCTTTATATTTANGaggatatttttatttggaatttaaaG
AACTAGGTATTTGAATTATTTAAATTGCATGCTGAAAATCTTTATATTTA
ATGATTATCTACCATTGTTAAATATTGAAAGAGGTATGCTCAGTCATATA
CTACTCTCAATATAGTTTCAGCgataaaagactttaaaaaaaaattattt
gcaaaCGCTGCTTCGACAGTTGTCGGTTATTTTTTACAAATCATTAGATC
ATTACTTAGTTGAAACcgaaaatatataatttcaaaagAGGCGTAATGCA
TACGCAGAATATGAAAATCTACgttcaaatagaccttttcgaattatcat
aaattacgtcacgaacatcaattgcctcgttttgaaattattgccaaggt
gattaactcccagcggatttcaTTAAAagtactttctattcataaaaaaa
tcatttaatgtctcaaggaaTATAattaccatggtaattgtttgaatacg
aggcaagtgatgatGTTCGtggcgtaatttatgaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011186XLOC_011186Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019870-exon-sc0000339-1491911889:166083..166382TCONS_00019870-exon-sc0000339-1491911889:166083..166382Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:166083..166382TCONS_00019870-exon-sc0000339-1510915933:166083..166382Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:166083..166382TCONS_00019870-exon-sc0000339-1575043694:166083..166382Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:166497..166589TCONS_00019870-exon-sc0000339-1491911889:166497..166589Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:166497..166589TCONS_00019870-exon-sc0000339-1510915933:166497..166589Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:166497..166589TCONS_00019870-exon-sc0000339-1575043694:166497..166589Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:166899..167041TCONS_00019870-exon-sc0000339-1491911889:166899..167041Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:166899..167041TCONS_00019870-exon-sc0000339-1510915933:166899..167041Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:166899..167041TCONS_00019870-exon-sc0000339-1575043694:166899..167041Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:167295..167342TCONS_00019870-exon-sc0000339-1491911889:167295..167342Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:167295..167342TCONS_00019870-exon-sc0000339-1510915933:167295..167342Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:167295..167342TCONS_00019870-exon-sc0000339-1575043694:167295..167342Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:167452..167527TCONS_00019870-exon-sc0000339-1491911889:167452..167527Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:167452..167527TCONS_00019870-exon-sc0000339-1510915933:167452..167527Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:167452..167527TCONS_00019870-exon-sc0000339-1575043694:167452..167527Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:167684..167757TCONS_00019870-exon-sc0000339-1491911889:167684..167757Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:167684..167757TCONS_00019870-exon-sc0000339-1510915933:167684..167757Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:167684..167757TCONS_00019870-exon-sc0000339-1575043694:167684..167757Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:167902..168018TCONS_00019870-exon-sc0000339-1491911889:167902..168018Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:167902..168018TCONS_00019870-exon-sc0000339-1510915933:167902..168018Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:167902..168018TCONS_00019870-exon-sc0000339-1575043694:167902..168018Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:168289..168379TCONS_00019870-exon-sc0000339-1491911889:168289..168379Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:168289..168379TCONS_00019870-exon-sc0000339-1510915933:168289..168379Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:168289..168379TCONS_00019870-exon-sc0000339-1575043694:168289..168379Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:168512..168575TCONS_00019870-exon-sc0000339-1491911889:168512..168575Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:168512..168575TCONS_00019870-exon-sc0000339-1510915933:168512..168575Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:168512..168575TCONS_00019870-exon-sc0000339-1575043694:168512..168575Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:168796..168860TCONS_00019870-exon-sc0000339-1491911889:168796..168860Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:168796..168860TCONS_00019870-exon-sc0000339-1510915933:168796..168860Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:168796..168860TCONS_00019870-exon-sc0000339-1575043694:168796..168860Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:169571..169631TCONS_00019870-exon-sc0000339-1491911889:169571..169631Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:169571..169631TCONS_00019870-exon-sc0000339-1510915933:169571..169631Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:169571..169631TCONS_00019870-exon-sc0000339-1575043694:169571..169631Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:169801..169882TCONS_00019870-exon-sc0000339-1491911889:169801..169882Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:169801..169882TCONS_00019870-exon-sc0000339-1510915933:169801..169882Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:169801..169882TCONS_00019870-exon-sc0000339-1575043694:169801..169882Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:169960..170048TCONS_00019870-exon-sc0000339-1491911889:169960..170048Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:169960..170048TCONS_00019870-exon-sc0000339-1510915933:169960..170048Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:169960..170048TCONS_00019870-exon-sc0000339-1575043694:169960..170048Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:170141..170202TCONS_00019870-exon-sc0000339-1491911889:170141..170202Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:170141..170202TCONS_00019870-exon-sc0000339-1510915933:170141..170202Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:170141..170202TCONS_00019870-exon-sc0000339-1575043694:170141..170202Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:170291..170371TCONS_00019870-exon-sc0000339-1491911889:170291..170371Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:170291..170371TCONS_00019870-exon-sc0000339-1510915933:170291..170371Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:170291..170371TCONS_00019870-exon-sc0000339-1575043694:170291..170371Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:170564..170669TCONS_00019870-exon-sc0000339-1491911889:170564..170669Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:170564..170669TCONS_00019870-exon-sc0000339-1510915933:170564..170669Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:170564..170669TCONS_00019870-exon-sc0000339-1575043694:170564..170669Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:170958..171154TCONS_00019870-exon-sc0000339-1491911889:170958..171154Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:170958..171154TCONS_00019870-exon-sc0000339-1510915933:170958..171154Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:170958..171154TCONS_00019870-exon-sc0000339-1575043694:170958..171154Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:172115..172185TCONS_00019870-exon-sc0000339-1491911889:172115..172185Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:172115..172185TCONS_00019870-exon-sc0000339-1510915933:172115..172185Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:172115..172185TCONS_00019870-exon-sc0000339-1575043694:172115..172185Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1491911889:172524..176170TCONS_00019870-exon-sc0000339-1491911889:172524..176170Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1510915933:172524..176170TCONS_00019870-exon-sc0000339-1510915933:172524..176170Clytia hemisphaericaexon
TCONS_00019870-exon-sc0000339-1575043694:172524..176170TCONS_00019870-exon-sc0000339-1575043694:172524..176170Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000339supercontigsc0000339:166083..176170 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.297324	4.47615e-05	2.54184e-05	0.000105467	0.529907	1.65302e-05	0.00501808	1.99265e-05	5.31769e-06	0.000100445	0.000137601	2.99358e-05	3.59661e-05	4.06707e-06	2.27966e-05	3.33558e-05	3.31962e-05	0.00186775	0.000144197	0.000124862	2.44068e-05	0.00127901	3.25106e-05	0.000139113	8.17462e-05	8.76707e-05	6.30987e-05	0.0119823	0.000441126	0.000194836
Blast
[Close]
BLAST of TCONS_00019870 vs. Swiss-Prot (Human)
Match: TPTE2 (Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 OS=Homo sapiens GN=TPTE2 PE=1 SV=2)

HSP 1 Score: 335.88 bits (860), Expect = 2.724e-100
Identity = 182/424 (42.92%), Postives = 271/424 (63.92%), Query Frame = 1 
Query:  664 YSYATLAIVSYFMLELMLRIFAWG-EEFFHHRLEVIDMIIVVLSXXXXXXXXXXXXDQHL-----KFGKLIIVFRLLRILMLSRICVGRKHLERSTRNLISQNKRRYVKDGFDLDLTYITDRMIAMSFPSSGKTSMYRNPISEVARFFNTKYPGHYKIYNLCSERHYETHWFNDSVERVLIDDHNVPRLSQLVQFVHSADEWMKKDEQNMLVLHCKGGKGRTGTAVAAWLLFSGQFKSADKALNYFGIRRTDEAKGNKYQGVETPSQSRYVRYLEKVIYSMNGRLPQPKQLRIKSVKITGLKTVGNGDGSDLSVEIVQNGQIIHKVVFNEP--GTNFLKTKGDSLKVIFNEKDNLMVVGDTKVRFHSSNTSVPKDYDFCAFFFWFHTSFIENKRFYVERNDIGNCHKRKYWKTYTEKFSVTVKF 1911
            Y   +LAI  +F+++++LR+F  G +++F     ++D  I+V+  +  +++     D  L     ++  L+ + RL+ ++ +  +   ++ LE+  R L+S+NKRRY +DGFDLDLTY+T+R+IAMSFPSSG+ S YRNPI EV RF + K+  HY++YNLCSER Y+   F++ V R++IDDHNVP L ++V F    +EWM +D +N++ +HCKGGKGRTGT V A L+ S  F +A+++L YFG RRT++   NK+QGVETPSQ+RYV Y  +V +  N  LP  + L IK   I  ++    GD  DL V++V       KVVF+    G   +    ++ K++ N  D   +  D KV+F SSN  +PK YD C FFFWF+TSFI+N R  + RN++ N HK+K WK Y  +F+V + F
Sbjct:  108 YRSISLAIGLFFLMDVLLRVFVEGRQQYFSDLFNILDTAIIVIPLLVDVIYIFF--DIKLLRNIPRWTHLVRLLRLIILIRIFHLLHQKRQLEKLMRRLVSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIEEVVRFLDKKHRNHYRVYNLCSERAYDPKHFHNRVSRIMIDDHNVPTLHEMVVFTKEVNEWMAQDLENIVAIHCKGGKGRTGTMVCALLIASEIFLTAEESLYYFGERRTNKTHSNKFQGVETPSQNRYVGYFAQVKHLYNWNLPPRRILFIKRFIIYSIR----GDVCDLKVQVVMEK----KVVFSSTSLGNCSILHDIETDKILINVYDGPPLYDDVKVQFFSSN--LPKYYDNCPFFFWFNTSFIQNNRLCLPRNELDNPHKQKAWKIYPPEFAVEILF 519
The following BLAST results are available for this feature:
BLAST of TCONS_00019870 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TPTE22.724e-10042.92Phosphatidylinositol 3,4,5-trisphosphate 3-phospha... [more]
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