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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019888 ID=TCONS_00019888|Name=TCONS_00019888|organism=Clytia hemisphaerica|type=transcript|length=1040bp
TACCGTTGCAGTTGCTGTTGTGACTGCGGAAACTCTCTAATGGGTGAATT
GAGACCACGCAAAAATTGGTCTTTCGCATGATCAGGTCAGGTGTAGCAGA
TCTAAGTTGACCAACGTAATCTTGTATAGTTTCATTGGAGATCTGTGGAG
ATTTGTACAATAGACAAAAGTGTCATTCGATGTACGCTTGGATTTGCTTG
CTTTGTTACAATTGACTCTATCTCCTGGAGTAGTTTGTCCTCGTCAACGT
AGAAGATGTCAGGGATGATCAACAAGACTTTTTTTTGGACCGTCCCTTTA
CAGCAATTGTACAGTTGTGCAAGGATTTGCTTACCAACAAGTGCGGTAAT
CTGCTTACCAATTAGTGCGGTAATCTGCTTGAAGACTGATCAGTCAatca
ggaattttcgaaattgGGGTTTTGTCATAACACTATTCACTACCGGAATC
TTAGCAGATGGGGCCTTGATGGTTGCCACGATTTGCCACAAGGTTGAGGT
GTTTTGGATCAGATTTACAGTGGTGCAATTGTTATTCCAATTTCTCATAA
GGTCTCTTTCGTTAAATCCTTTAATCATTATCATTGTCTCTGATATGCGT
GCGTCTGTGAAAAGTTTGGCATAGTATAGTAGGTTTTGCTTCCTTTTTTG
GGATTTCTGCCTCATTGTCATTAAAGAATTGCTCGCAGGTTTGTTCTGCC
TGCAGTGCCATATTGAAATTGAGTTGACATAAGAATAAATTGTACGTTAT
AAAGCCAATCAGGGCCAGCCAATATATTGTTGTGTTTATTATGCTAGAAG
CAGCCCTCGAAtttcaggtcggcattcggcagTGCCGACCTAAAAGCCGA
CCAAAGAGTGCGTATGGTCGGCAGTTCATTGCCGACCATATTCATTGATT
CTCTCGGCAGCCGACCATAAGTTATCTTTTAGGTCAGAAAAGCCGACCTG
TAACTGTAAAATGAAAGTCTCTAATAAGAACCATATCgcactcaaataaa
aaaacaaacattgccgtagcctttaaacaactttgccgac Run BLAST on NCBI transcript from alignment at sc0000339:243816..244855+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019888 ID=TCONS_00019888|Name=TCONS_00019888|organism=Clytia hemisphaerica|type=transcript|length=1040bp|location=Sequence derived from alignment at sc0000339:243816..244855+ (Clytia hemisphaerica)
TACCGTTGCAGTTGCTGTTGTGACTGCGGAAACTCTCTAATGGGTGAATT
GAGACCACGCAAAAATTGGTCTTTCGCATGATCAGGTCAGGTGTAGCAGA
TCTAAGTTGACCAACGTAATCTTGTATAGTTTCATTGGAGATCTGTGGAG
ATTTGTACAATAGACAAAAGTGTCATTCGATGTACGCTTGGATTTGCTTG
CTTTGTTACAATTGACTCTATCTCCTGGAGTAGTTTGTCCTCGTCAACGT
AGAAGATGTCAGGGATGATCAACAAGACTTTTTTTTGGACCGTCCCTTTA
CAGCAATTGTACAGTTGTGCAAGGATTTGCTTACCAACAAGTGCGGTAAT
CTGCTTACCAATTAGTGCGGTAATCTGCTTGAAGACTGATCAGTCAatca
ggaattttcgaaattgGGGTTTTGTCATAACACTATTCACTACCGGAATC
TTAGCAGATGGGGCCTTGATGGTTGCCACGATTTGCCACAAGGTTGAGGT
GTTTTGGATCAGATTTACAGTGGTGCAATTGTTATTCCAATTTCTCATAA
GGTCTCTTTCGTTAAATCCTTTAATCATTATCATTGTCTCTGATATGCGT
GCGTCTGTGAAAAGTTTGGCATAGTATAGTAGGTTTTGCTTCCTTTTTTG
GGATTTCTGCCTCATTGTCATTAAAGAATTGCTCGCAGGTTTGTTCTGCC
TGCAGTGCCATATTGAAATTGAGTTGACATAAGAATAAATTGTACGTTAT
AAAGCCAATCAGGGCCAGCCAATATATTGTTGTGTTTATTATGCTAGAAG
CAGCCCTCGAAtttcaggtcggcattcggcagTGCCGACCTAAAAGCCGA
CCAAAGAGTGCGTATGGTCGGCAGTTCATTGCCGACCATATTCATTGATT
CTCTCGGCAGCCGACCATAAGTTATCTTTTAGGTCAGAAAAGCCGACCTG
TAACTGTAAAATGAAAGTCTCTAATAAGAACCATATCgcactcaaataaa
aaaacaaacattgccgtagcctttaaacaactttgccgac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019888-exon-sc0000339-1491911889:243816..244855 | TCONS_00019888-exon-sc0000339-1491911889:243816..244855 | Clytia hemisphaerica | exon |
| TCONS_00019888-exon-sc0000339-1510915933:243816..244855 | TCONS_00019888-exon-sc0000339-1510915933:243816..244855 | Clytia hemisphaerica | exon |
| TCONS_00019888-exon-sc0000339-1575043694:243816..244855 | TCONS_00019888-exon-sc0000339-1575043694:243816..244855 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339 | supercontig | sc0000339:243816..244855 + |
Blast
The following BLAST results are available for this feature:
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