TCONS_00019922 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019922
Unique NameTCONS_00019922
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2613

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019922 ID=TCONS_00019922|Name=TCONS_00019922|organism=Clytia hemisphaerica|type=transcript|length=2613bp
TTTAGTTATaataagaaattgaaaatttgctcaTTCGTGGTAAAAAATGG
TTTCCAATGTAGCCCAAACGGGTGAAAATTCATCTGCTGCTGAAACAAAc
tcaaagaaatcaaagaaaaagtcagGTCCTCAATATGAATGCGTCATCAC
ATGCTTGGATGGCTCTGTGATCAACACTTCTGTTGAGaaaTCAGCCAAAG
GAGAAGAACTAGTCAATAAAGTAGCTCAAGAACTTGATGTGAAATCGAAA
GATTATGTTGGTCTCCTTTTCAATAATGGAACAAGGcaatGGTTGGATAT
TCATAAAGATATGAAACATCAGTTGGGAGatTCTAAAGCAGAATTTTTAT
TTCGGGTCAAATTCTATGAGCCTGAGCCCAGCAAAATTCAAGAAGATCAT
TTAAGATATTTACTTTATCTCCAGATTAGAGAAGATTTATCAGAAAAAAG
attAAAATGCACAGAAGAAGTAATTGCTCAACTTGGTGCATATACTGCAC
AAgcTGAAGTAGGAGACTTCAATTTATCAGAGCATGAGCATGATTACTTG
AAAGATTATGAGTTTGCTGAGAATACCGATATACTTGAAAGAATCAATTT
ATTGCACAAACAACACAGGGGTCAAACACCTTTACAAGCTGAACTTAACT
TTTTGGAAATTGCCAAAAAGATTCCTAGATATGGAGTGGACGTACATGAT
GCCATGGATACCAATGGGCATGTAGAGATTGGTATTGCTGCTTTAGGAAT
AAACATCTATCGGGATGGAAAGCGTGAACAGCTTTTCAGATGGCAAAATA
TGCATGACTTCAATTACAACCGAAGAAAATTCACCATTAAACTCAAACAA
CCAGTGAGCGACAATGACAATAAGAAGAATTACGTATATTATTTCGAATC
TGCTAAAAGCTGCAAACAATGCTACAAAGTGGCTGTTGAATATCATTCTT
TCTTCCGATTGACAAGACCTGATGCTCCACGAAAACGTGCTGACACCTTG
AAAATGGGATCTAGCTTCAGATACAgTGATCGAACCTTGTATCAACTGAG
ATACCAAAAAGGTGATGAAGCACCTAAAAATGCTGCCAACTTCAAACGAA
CGCCAAGCACAAGGAAGACATTACCTCCTTCTTACAAAACACCGTTGATT
GAACCTGAAGTGCCATTCATTGAACCAACTAAAGTGGCACCACTTGAAGA
AGAACCAGTCCACTATGAAGAAGTACCAGTCCAATACGAAGAAGTAGAGT
TCGATGAAGCCAATCCTGATGATGATAACTTTGATCCtgagGAATGGGAA
ACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACG
TAATATCGTTCTTAATGTTGTGAAGAAACCCAAGAGTGGGAAATCTCTAG
TCGAAGAACCAGTTCAATATTATGAAGAAGTGGAAGTTGATGAAGCCAAT
CCTGATGATGATAAATTTGATCCTAAGGAATGGGAAACGGTCGAGAATAC
GATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACGTAATATCGTTCTTA
ATGTTGTGAAGAAACCAAAGATTGGGAAATCTCCAGTCGAAGAACCAGTT
CAATATAATGAAGAAGTAGAGTTCGATGAAGCCAATCCTGATGATGATAA
ATATGATCCTGAGGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTT
CGAAGAAGAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAA
CCAAAGATTGGGAAATCTCCAGTCGAAGAACCCATTCAATATAATGAAGA
AGTGGAAGTCGATGAAGCCAATCCTGATGATGATAAATATGATCCTGAGG
AATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATTC
CGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAAGATTGGGAA
ATCTCCAGTCGAAGAACCCATTCAATATAATGAAGAAGTGGAAGTCGATG
AAGCCAATCCTGATGATGATAAATATGATCCTGAGGAATGGGAAACAGTC
GAGAAGACGATGCCTGATGGTTCGAAGAAGAAATTCCGCCGACGAATTAT
TGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTCGAGG
AAGAACCAGTTCAATATGAAGAAGTGGAAGTTGATGAAGCAAATCCTGAT
GATGATAAATATGATCCTAAGGAATGGGAAACAGTCGAGAAGACGATGCC
TGATGGTTCGAAGAAGAAATTCCGCCGACGAATCATTGTTCTTAATGTTG
TGAAGAAACCAAAGAGTGGAGATGAGGAGAAACCGTCAGAAGTCGACGAA
GAACCCATCGAATATGAAGAAGTTGAAATTGATGAAGCCAACCCTCAAGA
TGATCAATTTGATCCAAAAgagTGGGAAGTTGTGGAGAAAGAAAAACCGA
ATGGCGACAAAGTACGCGTCAGACGGCGTCGTGTCGTCATTTTGAAGATC
GTGAAGGAGCCTGAAGATCTGGTGAATGAAAATGAAGTGACTGTCGAAGA
AATGCCACTCAATGAAAATGCTCCAACACAAGAAGATGATGACAAGTTTG
ACCCTGAGGTAAA
Run BLAST on NCBI

transcript from alignment at sc0000339:287895..298726+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019922 ID=TCONS_00019922|Name=TCONS_00019922|organism=Clytia hemisphaerica|type=transcript|length=10832bp|location=Sequence derived from alignment at sc0000339:287895..298726+ (Clytia hemisphaerica)
TTTAGTTATaataagaaattgaaaatttgctcaTTCGTGGTAAAAAATGG
TTTCCAATGTAGCCCAAACGGGTGAAAATTCATCTGCTGCTGAAACAAAc
tcaaagaaatcaaagaaaaagtcagGTCCTCAATATGAATGCGTCATCAC
ATGCTTGGATGGCTCTGTGATCAACACTTCTGTTGAGGTTTGAAGTTTTT
ATTTTCCccttgaattttgatttttgtcatCATGATCATGTATAGGCAAA
TGGAAAAAAAGCTATTAAATTTATCTCCAAAGTTAGTTTCTTGATTTGAT
TGGGTtggaatatttattttttgtctaCAAGAACAGGTTGGgtttaatta
aattttaattCCAAATAGTGTGTTATACAGATTGTAAGTGTATATTTAAT
GGTAATTGATTCGGATTAGGCtggacggcaaaccaacaattttttaagtc
cagccttatTTTGACCTCTAAAAGGCCCTTATAAAGTGCACAAAGAATTT
TATCAATGATAATGTGTTTCTATAACCAATacaacaaagggttttttcga
ttttagaaaTCAGCCAAAGGAGAAGAACTAGTCAATAAAGTAGCTCAAGA
ACTTGATGTGAAATCGAAAGATTATGTTGGTCTCCTTTTCAATAATGGAA
CAAGGGTAagattttcagaatattttccTATTGTAAAAAGCTTAACATTT
TcaggataatttttttcattttaccaTGCACAGGAGTACCTTtccagaaa
attattttgataaacttattttatttttcagcaatGGTTGGATATTCATA
AAGATATGAAACATCAGTTGGGAGGTTGGTACTTCTTCAGTtttgttttt
ggaattttttttagtgaaaatctttaaattatGCATAACTTGCCCATTTC
ATTTCTCTTTATGAATTATTTAGCAAGGAAGAGGTGTTTTCAAATgtgct
ttttatttatttcagatTCTAAAGCAGAATTTTTATTTCGGGTCAAATTC
TATGAGCCTGAGCCCAGCAAAATTCAAGAAGATCATTTAAGGTTTGTTAT
TTGTTTTCCCCTTTCtatacaaaaatgtttttgtttgaccCAGCTTTATA
TTTTTTGCTCAAGTCTCAATATATTGACTGAATTATTTACTCAAtgcaaa
ttcaaattcaaaaacaaatgttttttattccttttaatgattttagtgaa
acaggtttttaaattttggaattcttttgaaacccattaaatttttgtgt
tttcagATATTTACTTTATCTCCAGATTAGAGAAGATTTATCAGAAAAAA
GGTAAATAATGTTTATCTAGTTAACAAATTGTGTTGGTATAGGTTTCCAT
GGAGAAGTTGGATTACAGCTTATTctaattaatgtaattaaagtATATCC
TTTAATCATCAAAATTACTTGGCACTTAGCAGCCATATTATTGATTTTAA
tgacatcatttttttctttaagattAAAATGCACAGAAGAAGTAATTGCT
CAACTTGGTGCATATACTGCACAAggtaaatttgttttaaaacctTTGGC
AATGTGTCATTATTTAATGTTTGTTTTTAGTCAATTGCACCCTGTCAACC
AAAGTTTAAAAGTCTTAACTgatatttttcaacatttaaaaaattgagat
tcCAATACATATATAAAAGTATTTACTTGGGATAGTTAAGTCATGTTTAT
TAAAacttatttgaaatttcaattgatattttttcagcTGAAGTAGGAGA
CTTCAATTTATCAGAGCATGAGCATGATTACTTGAAAGATTATGAGTTTG
CTGAGGTAAGTAAAGTCTATACCAACAAATAACATGATTCCTTAAGCTGA
AATCACCCTAAAGGAACTCTTTAAtgaaaaagtcattttcttACCATAGA
ATACCGATATACTTGAAAGAATCAATTTATTGCACAAACAACACAGGtat
tcattttcttcatttttgattcAGTTCCAACCTTCTCTTGTACTTTTTTC
ACTGGATAATGCAATGGATAGATGGATTTTACTTAAACTTCGCATAAATG
TCTTCATAATAATTACTCTTACTTTTTTATTTAGGGGTCAAACACCTTTA
CAAGCTGAACTTAACTTTTTGGAAATTGCCAAAAAGATTCCTAGATATGG
AGTGGACGTACATGATGCCATGGTAGGTATTTTAAGAACAAAATGAAGTT
TAAGCAACCCAAACAACCTTTTAATGTCTTAAATGTAAGCTTATGTTCAA
ATATTGAATGTTCTTTTTTTGTCTTTAGGATACCAATGGGCATGTAGAGA
TTGGTATTGCTGCTTTAGGAATAAACATCTATCGGGATGGAAAGCGTGAA
CAGCTTTTCAGATGGCAAAATATGCATGACTTCAATTACAACCGAAGAAA
ATTCACCATTAAACTCAAACAACCAGTGGTACGTATGCTTTTCCTTTAGC
TGAAAGTAATTCTATTTTAATTTTGTAAAGCGTCACAtgtttctaaaata
ttcagtaattttaaatgttttatttcaGAGCGACAATGACAATAAGAAGA
ATTACGTATATTATTTCGAATCTGCTAAAAGCTGCAAACAATGCTACAAA
GTGGCTGTTGAATATCATTCTTTCTTCCGATTGACAAGACCTGATGCTCC
ACGAAAACGTGCTGACACCTTGAAAATGGGATCTAGCTTCAGATACAggt
ataaaaaattgttttcacaaaatatttatttcaccACTAACTCCACTTCT
ATCTCAACTAAAGTGAAAACATTGTCACTAAATCACTCAACTCAATTTTT
ATGTTTCTAAATTAGAAGGTTGATTTaatgcatgttttttttataacaac
atccaaaaaattttaagccttcggaatcggatgttcttaactttttcatt
tttaagcctaagaatgttcttaaaatcttcttaatttctacattttttga
gtgtttttgtgcaattttgaaagaaatcgagtgttttagagcccatgaag
ccttaaaatgttgttaACTTGTTCTTACTTAACACTTTGGTCATCGAATA
TGTTCTtatcttatatagtttgttcttattaaaaaagcgtgtatgttcTT
TCTTTTCAGTGATCGAACCTTGTATCAACTGAGATACCAAAAAGGTGATG
AAGCACCTAAAAATGCTGCCAACTTCAAACGAACGCCAAGCACAAGGAAG
ACATTACCTCCTTCTTACAAAACACCGTTGATTGAACCTGAAGTGCCATT
CATTGAACCAACTAAAGGTAGTTTATTCTTCTTTGGAAATGTAAATTAAT
GCTTATTTCTGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTTGTTTTCTTTAAGATTAAAATGCACAGAAGAAGTAATTGCTCAAC
TTGGTGCATATACTGCACAAggtaaatttgttttaaaacctTTGGCAATG
TGTCATTATTTAATGTTTGTTTTTAGTCAATTGCACCCTGTCAACCAAAG
TTTAAAAGTCTTAACTgatatttttcaacatttaaaaaattgagattcCA
ATACATATATAAAAGTATTTACTTGGGATAGTTAAGTCATGTTTATTAAA
acttatttgaaatttcaattgatattttttcagcTGAAGTAGGAGACTTC
AATTTATCAGAGCATGAGCATGATTACTTGAAAGATTATGAGTTTGCTGA
GGTAAGTAAAGTCTATACCAACAAATAACATGATTCCTTAAGCTGAAATC
ACCCTAAAGGAACTCTTTAAtgaaaaagtcattttcttACCATAGAATAC
CGATATACTTGAAAGAATCAATTTATTGCACAAACAACACAGGtattcat
tttcttcatttttgattcAGTTCCAACCTTCTCTTGTACTTTTTTCACTG
GATAATGCAATGGATAGATGGATTTTACTTAAACTTCGCATAAATGTCTT
CATAATAATTACTCTTACTTTTTTATTTAGGGGTCAAACACCTTTACAAG
CTGAACTTAACTTTTTGGAAATTGCCAAAAAGATTCCTAGATATGGAGTG
GACGTACATGATGCCATGGTAGGTATTTTAAGAACAAATGAAGTTTAAGC
AACCCAAACAACCTTTTAATGTCTTAAATGTAAGCTTATGTTCAAATATt
aaatgttctttttttgtCTTTAGGATACCAATGGGCATGTAGAGATTGGT
ATTGCTGCTTTAGGAATAAACATCTATCGGGATGGAAAGCGTGAACAGCT
TTTCAGATGGCAAAATATGCATGACTTCAATTACAACCGAAGAAAATTCA
CCATTAAACTCAAACAACCAGTGGTACGTATGCTTTTCCTTTAGCTGAAA
GTAATTCTATTTTAATTTTGTAAAGCGTCACATGTTTCTAAAACATTCag
taattttaaatgttttatttcaGAGCGACAATGACAATAAGAAGAATTAC
GTATATTATTTCGAATCTGCTAAAAGCTGCAAACAATGCTACAAAGTGGC
TGTTGAATATCATTCTTTCTTCCGATTGACAAGACCTGATGCTCCACGAA
AACGTGCTGACACCTTGAAAATGGGATCTAGCTTCAGATACAggtataaa
aaattgttttcacaaaatatttatttcaccACTAACTCCACTTCTATCTC
AACTAAAGTGAAAACATTGTCACTAAATCACTCAACTCAATTTTTATGTT
TCTAAATTAGAAGGTTGATTTaatgcatgttttttttataacaacatcca
aaaattttaagcTTTCGGAATCGgatcttcttaactttttcagttttaag
cctaagaatgttcttaaaatcttcttaatttctacattttttgagtgttt
ttgtgcaattttgaaagaaatcgagtgttttagagcccatgaagccttaa
aatgttgttaACTTGTTCTTACTTAACACTTTGGTCATCGAATATGTTCT
tatcttatatagtttgttcttattaaaaaagcgtgtatgttcTTTCTTTT
CAGTGATCGAACCTTGTATCAACTGAGATACCAAAAAGGTGATGAAGCAC
CTAAAAATGCTGCCAACTTCAAACGAACGCCAAGCACAAGGAAGACATTA
CCTCCTTCTTACAAAACACCGTTGATTGAACCTGAAGTGCCATTCATTGA
ACCAACTAAAGGTAGTTTATTCTTCTTTGGAAATGTAAATTAATGCTTAT
ttctggtttttacacaaaaaattGTGGTTGGAATATATGTCTGGAGACTG
AAGActaaattttcaaatctttttccttTAGTGGCACCACTTGAAGAAGA
ACCAGTCCACTATGAAGAAGTACCAGTCCAATACGAAGAAGTAGAGTTCG
ATGAAGCCAATCCTGATGATGATAACTTTGATCCtgaggtattttttatt
ttggggAGCCTTTCGATGCTATTCTACAGTTTACTACAGTTGAATTAGTT
CAGTTTTTTTtgctggaaatttttttatcttttcgtTTTATGAGAAACTT
GGATTCATAAGAAACTTGAAGAACTTTTTATTAAATCTTCAAAGTCATTG
AAAACTTTATCACTTTCCTCTAGGAATGGGAAACAGTTGAGAAGACGATG
CCTGATGGTTCGAAGAAGAAATCCCGTCGACGGGTCATCGTTCTTAATGT
TGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTTGAAGAACCAGTTCAAT
ATTATGAAGAAGTGGAAGTCGATGAAGCCAATCCTGATGATGATAAATTT
GATCCTAAGGTATATTGTTAGCACAGAATTTCCTTTTCCGAAATCTTCAG
TGTGACCTGAAGATCTGGAAAACGAtaagattttgctgaaattttgcctA
CTCTGACatgtcttttttttcctttNCGGATTTGGCTTATATTTTGCGCA
CTCTGACATGTCTCTATtcctttttttgcttgagacgAGCTTTGTACGAT
AGCTTCGCGTTCTTATCAATTTATAATATACTAAATTTAAGCCCATTCGA
CTATGAAATAAAAAGTTGCCAATGTCTTTCATCTGCTTTCACTGCATTTT
GAACTCAATCAACTTCACTTACTTTCGTCTTCTTCAGGAATGGGAAACGG
TCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACGTAAT
ATCGTTCTTAATGTTGTGAAGAAACCCAAGAGTGGGAAATCTCTAGTCGA
AGAACCAGTTCAATATTATGAAGAAGTGGAAGTTGATGAAGCCAATCCTG
ATGATGATAAATTTGATCCTAAGGTATCGTTAGCAcagaatttctttttt
ctaaaaacatcGGGGTGACCTGGAGATTGGGGGAACGATCGGATTTGGCT
TATATTTTGCGCACTCTGACATGTCTCTATtcctttttttgcttgagacg
AGCTTTGTACGATAGCTTCGCGTTCTTATCAATTTATAATATACTAAATT
TAAGCCCATTCGACTATGAAATAAAAAGTTGCCAATGTCTTTCATCTGCT
TTCACTGCATTTTGAACTCAATCAACTTCACTTACTTTCGTCTTCTTCAG
GAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATT
CCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCCAAGAGTGGGA
AATCTCTAGTCGAAGAACCAGTTCAATATTATGAAGAAGTGGAAGTTGAT
GAAGCCAATCCTGATGATGATAAATTTGATCCTAAGGTATCGTTAGCAca
gaatttcttttttctaaaaacatcGGGGTGACCTGGAGATTCGGAGAACG
ATCGCATTTGGCTGAAGTTTTGCGCACTCTGACATgtctctatttctttt
tttgcttgagacgAGCTTTGTACGATAGCTTCGCGTTCTTAGTTATtgag
aaaatattgaatttaagCCCATTCGACTATGAAATAAGTTGTCAATGTCT
TTCACTGCAATATGAAGTCACTCAACTTCacttactttcgttttcttcag
GAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATT
CCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAAGATTGGGA
AATCTCCAGTCGAAGAACCAGTTCAATATAATGAAGAAGTAGAGTTCGAT
GAAGCCAATCCTGATGATGATAAATATGATCCTGAGGTATTTTTTATTTG
GGGAAAGCctttcaatgcaattttacaGGTGACGAGTTCAGTATTTTTTG
CTGGAATTTTTTACGTCTTTTcgttttataagaaatttttcaaaatcatt
ttaaactTTCTCATTTTCCTCTAGGAATGGGAAACAGTCGAGAAGAAGAT
GCCTGATGGTTCAAAGAAGAAATTCCGCCGACGAATTATTGTTCTTAATG
TTGTGAAGAAACAAAAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGTT
CAATATGAACAAGTGGAAGTTGATGAAGCCAATCCTGATGATGATAAATT
TGATCCTAAGGTATCGTTAGCAcagaatttcttttttctaaaaacatcGG
GGTGACCTGGAGATTCGGAGAACGATCGCATTTGGCTGAAGTTTTGCGCA
CTCTGACATgtctctatttctttttttgcttgagacgAGCTNGGGGGAAC
GATCGGATTTGGCTTATATTTTGCGCACTCTGACATGTCTCTATtccttt
ttttgcttgagacgAGCTTTGTACGATAGCTTCGCGTTCTTATCAATTTA
TAATATACTAAATTTAAGCCCATTCGACTATGAAATAAAAAGTTGCCAAT
GTCTTTCATCTGCTTTCACTGCATTTTGAACTCAATCAACTTCACTTACT
TTCGTCTTCTTCAGGAATGGGAAACAGTCGAGAATACGATGCCTGATGGT
TCGAAGAAGAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAA
ACCCAAGAGTGGGAAATCTCTAGTCGAAGAACCAGTTCAATATTATGAAG
AAGTGGAAGTTGATGAAGCCAATCCTGATGATGATAAATTTGATCCTAAG
GTATCGTTAGCAcagaatttcttttttctaaaaacatcGGGGTGACCTGG
AGATTCGGAGAACGATCGCATTTGGCTGAAGTTTTGCGCACTCTGACATg
tctctatttctttttttgcttgagacgAGCTTTGTACGATAGCTTCGCGT
TCTTAGTTATtgagaaaatattgaatttaagCCCATTCGACTATGAAATA
AAAAGTTGCCAATGTCTTTCACCTGCTTTCACTGCAATATGAAGTCACTC
AACTTCacttactttcgttttcttcagGAATGGGAAACGGTCGAGAATAC
GATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACGTAATATCGTTCTTA
ATGTTGTGAAGAAACCAAAGATTGGGAAATCTCCAGTCGAAGAACCCATT
CAATATAATGAAGAAGTGGAAGTCGATGAAGCCAATCCTGATGATGATAA
ATATGATCCTGAGGTATGTTTTTTTTGGGGAAAcctttcactgaaatttc
aggCAATTTTACAGTTTGCAGGTGACGAGTTCAGTATTTTTGCTGGAATT
TTTTACGTctctttgttttataagaaacttttcaaaatcattttaaactT
TCTCATTTTCCTCTAGGAATGGGAAACAGTCGAGAAGAAGATGCCTGATG
GTTCAAAGAAAAAGTTCCGCCGACGAACCATTGTTCTTAATGTTGTGAAG
AAACCAAAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGTTCAATATGA
AGAAGTGGAAGTTGATGAAGCAAATCCTGATGATGATAAATATGATCCTA
AGGTATAGTTAGCACAGAATTTCTTTCTCTCTCTCACTTTAAAGCCAATA
TTGTGCATCTCCGAGTCATTTGATGTTTTTCAGGTCTCAAACGAGCCAGG
TCTACTCAAAtttacattatttttcaaatatctcCTCTAGGAATGGGAAA
CAGTCGAGAAGACGATGCCTGATGGTTCGAANGTTGTCAATGTCTTTCAC
TGCAATATGAAGTCACTCAACTTCacttactttcgttttcttcagGAATG
GGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGTA
GACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAAGATTGGGAAATCT
CCAGTCGAAGAACCCATTCAATATAATGAAGAAGTGGAAGTCGATGAAGC
CAATCCTGATGATGATAAATATGATCCTGAGGTATGTTTTTTTTGGGGAA
AcctttcactgaaatttcaggCAATTTTACAGTTTGCAGGTGACGAGTTC
AGTATTTTTGCTGGAATTTTTTACgtctttttgttttataagaaactttt
caaaatcattttaaactTTCTCATTTTCCTCTAGGAATGGGAAACAGTCG
AGAAGAAGATGCCTGATGGTTCAAAGAAGAAATTCCGCCGACGAACCATT
GTTCTTAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTCGAGGA
AGAACCAGTTCAATATGAAGAAGTGGAAGTTGATGAGGCAAATCCTGATG
ATGATAAATTTGATCCTAAGGTATTGTTTGCACAGAAtttctttctctct
ctctcacTTTAAAGCCAATATTGTGCATCTCCGAGTCATTTGATGTTTTT
CAGGTCTCAAACGAGCCAGATCTACTcaaatttacaatatttttcaaata
tctcCTCTAGGAATGGGAAACAGTCGAGAAGACGATGCCTGATGGTTCGA
AGAAGAAATTCCGCCGACGAATTATTGTTCTTAATGTTGTGAAGAAACCA
AAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGTTCAATATGAAGAAGT
GGAAGTTGATGAAGCAAATCCTGATGATGATAAATATGATCCTAAGGTAT
AGTTAGCACAGAATTTCTTTCTCTCTCTCACTTTAAAGCCAATATTGTGC
ATCTCCGAGTCATTTGATGTTTTTCAGGTCTCAAACGAGCCAGGTCTACT
CAAAtttacattatttttcaaatatctcCTCTAGGAATGGGAAACAGTCG
AGAAGACGATGCCTGATGGTTCGAAGAAGAAATTCCGCCGACGAATCATT
GTTCTTAATGTTGTGAAGAAACCAAAGAGTGGAGATGAGGAGAAACCGTC
AGAAGTCGACGAAGAACCCATCGAATATGAAGAAGTTGAAATTGATGAAG
CCAACCCTCAAGATGATCAATTTGATCCAAAAGTAAATAATTGATGTGAC
TTTCTTCAGTTTCTCTTACTTCATTACCTATGCCACATTTTGACATCTTg
ttttttacaatttcttaacTTAACTTGATACATCACATTTTAGGCTTCCC
AggcagtcacaacttaaccatcttttaattttttttaggagTGGGAAGTT
GTGGAGAAAGAAAAACCGAATGGCGACAAAGTACGCGTCAGACGGCGTCG
TGTCGTCATTTTGAAGATCGTGAAGGAGCCTGAAGATCTGGTGAATGAAA
ATGAAGTGACTGTCGAAGAAATGCCACTCAATGAAAATGCTCCAACACAA
GAAGATGATGACAAGTTTGACCCTGAGGTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011193XLOC_011193Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019922-exon-sc0000339-1491911889:287895..288081TCONS_00019922-exon-sc0000339-1491911889:287895..288081Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:287895..288081TCONS_00019922-exon-sc0000339-1510915933:287895..288081Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:287895..288081TCONS_00019922-exon-sc0000339-1575043694:287895..288081Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:288451..288549TCONS_00019922-exon-sc0000339-1491911889:288451..288549Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:288451..288549TCONS_00019922-exon-sc0000339-1510915933:288451..288549Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:288451..288549TCONS_00019922-exon-sc0000339-1575043694:288451..288549Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:288676..288718TCONS_00019922-exon-sc0000339-1491911889:288676..288718Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:288676..288718TCONS_00019922-exon-sc0000339-1510915933:288676..288718Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:288676..288718TCONS_00019922-exon-sc0000339-1575043694:288676..288718Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:288860..288935TCONS_00019922-exon-sc0000339-1491911889:288860..288935Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:288860..288935TCONS_00019922-exon-sc0000339-1510915933:288860..288935Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:288860..288935TCONS_00019922-exon-sc0000339-1575043694:288860..288935Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:289151..289195TCONS_00019922-exon-sc0000339-1491911889:289151..289195Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:289151..289195TCONS_00019922-exon-sc0000339-1510915933:289151..289195Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:289151..289195TCONS_00019922-exon-sc0000339-1575043694:289151..289195Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:289367..289419TCONS_00019922-exon-sc0000339-1491911889:289367..289419Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:289367..289419TCONS_00019922-exon-sc0000339-1510915933:289367..289419Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:289367..289419TCONS_00019922-exon-sc0000339-1575043694:289367..289419Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:289632..289699TCONS_00019922-exon-sc0000339-1491911889:289632..289699Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:289632..289699TCONS_00019922-exon-sc0000339-1510915933:289632..289699Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:289632..289699TCONS_00019922-exon-sc0000339-1575043694:289632..289699Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:289794..289840TCONS_00019922-exon-sc0000339-1491911889:289794..289840Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:289794..289840TCONS_00019922-exon-sc0000339-1510915933:289794..289840Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:289794..289840TCONS_00019922-exon-sc0000339-1575043694:289794..289840Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:289979..290066TCONS_00019922-exon-sc0000339-1491911889:289979..290066Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:289979..290066TCONS_00019922-exon-sc0000339-1510915933:289979..290066Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:289979..290066TCONS_00019922-exon-sc0000339-1575043694:289979..290066Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:290173..290322TCONS_00019922-exon-sc0000339-1491911889:290173..290322Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:290173..290322TCONS_00019922-exon-sc0000339-1510915933:290173..290322Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:290173..290322TCONS_00019922-exon-sc0000339-1575043694:290173..290322Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:290423..290592TCONS_00019922-exon-sc0000339-1491911889:290423..290592Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:290423..290592TCONS_00019922-exon-sc0000339-1510915933:290423..290592Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:290423..290592TCONS_00019922-exon-sc0000339-1575043694:290423..290592Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:291004..291161TCONS_00019922-exon-sc0000339-1491911889:291004..291161Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:291004..291161TCONS_00019922-exon-sc0000339-1510915933:291004..291161Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:291004..291161TCONS_00019922-exon-sc0000339-1575043694:291004..291161Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:293376..293482TCONS_00019922-exon-sc0000339-1491911889:293376..293482Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:293376..293482TCONS_00019922-exon-sc0000339-1510915933:293376..293482Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:293376..293482TCONS_00019922-exon-sc0000339-1575043694:293376..293482Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:294182..294367TCONS_00019922-exon-sc0000339-1491911889:294182..294367Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:294182..294367TCONS_00019922-exon-sc0000339-1510915933:294182..294367Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:294182..294367TCONS_00019922-exon-sc0000339-1575043694:294182..294367Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:295095..295280TCONS_00019922-exon-sc0000339-1491911889:295095..295280Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:295095..295280TCONS_00019922-exon-sc0000339-1510915933:295095..295280Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:295095..295280TCONS_00019922-exon-sc0000339-1575043694:295095..295280Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:296422..296607TCONS_00019922-exon-sc0000339-1491911889:296422..296607Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:296422..296607TCONS_00019922-exon-sc0000339-1510915933:296422..296607Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:296422..296607TCONS_00019922-exon-sc0000339-1575043694:296422..296607Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:297190..297375TCONS_00019922-exon-sc0000339-1491911889:297190..297375Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:297190..297375TCONS_00019922-exon-sc0000339-1510915933:297190..297375Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:297190..297375TCONS_00019922-exon-sc0000339-1575043694:297190..297375Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:297855..298040TCONS_00019922-exon-sc0000339-1491911889:297855..298040Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:297855..298040TCONS_00019922-exon-sc0000339-1510915933:297855..298040Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:297855..298040TCONS_00019922-exon-sc0000339-1575043694:297855..298040Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:298179..298376TCONS_00019922-exon-sc0000339-1491911889:298179..298376Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:298179..298376TCONS_00019922-exon-sc0000339-1510915933:298179..298376Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:298179..298376TCONS_00019922-exon-sc0000339-1575043694:298179..298376Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1491911889:298533..298726TCONS_00019922-exon-sc0000339-1491911889:298533..298726Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1510915933:298533..298726TCONS_00019922-exon-sc0000339-1510915933:298533..298726Clytia hemisphaericaexon
TCONS_00019922-exon-sc0000339-1575043694:298533..298726TCONS_00019922-exon-sc0000339-1575043694:298533..298726Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000339supercontigsc0000339:287895..298726 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	2.24553e-06	1.97858e-07	0	1.17833e-06	0	0	0	2.77468e-08	0	0	2.77983e-08	0	0	0	1.86367e-08	0	0	0	0	0	0	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00019922 vs. Swiss-Prot (Human)
Match: E41L2 (Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 1.403e-67
Identity = 141/351 (40.17%), Postives = 207/351 (58.97%), Query Frame = 2 
Query:   77 NSSAAETNSKKSKKKSGPQYECVITCLDGSVINTSVEKSAKGEELVNKVAQELDVKSKDYVGLLFNNGTRQ--WLDIHKDMKHQLGDSKAEFLFRVKFYEPEPSKIQEDHLRYLLYLQIREDLSEKRLKCTEEVIAQLGAYTAQAEVGDFNLSEHEHDYLKDYEFA--ENTDILERINLLHKQHRGQTPLQAELNFLEIAKKIPRYGVDVHDAMDTNG-HVEIGIAALGINIYRDGKREQLFRWQNMHDFNYNRRKFTIKLKQPVSDNDNKKNYVYYFESAKSCKQCYKVAVEYHSFFRLTRPDAPRKRADTLKMGSSFRYSDRTLYQLRYQKGDEAPKNAANFKRTPSTR 1114
            N   AE  S+K  KK+    +C +T LDG+  +  +EK AKG+ L +KV + L++  KDY GLLF     Q  WLD  K++K QL +    F F VKFY P+PS++ ED  RY L LQ+R+D++  RL C+    A LG+YT QAE+GD++  EH    L +++FA  +  ++ E++  LHK HRG +P QA+  FLE AK++  YGVD+H A D+ G  +++G+ A G+ IY+D  R   F W  +   +Y R  F IK++ P      +    +   + ++ K+ +KV VE+H+F+RL  P+ P K A  L +GS FRYS RT  Q R Q      + A +F+RT S R
Sbjct:  200 NELKAEKASQKVTKKT-KTVQCKVTLLDGTEYSCDLEKHAKGQVLFDKVCEHLNLLEKDYFGLLFQESPEQKNWLDPAKEIKRQLRNLPWLFTFNVKFYPPDPSQLTEDITRYFLCLQLRQDIASGRLPCSFVTHALLGSYTLQAELGDYDPEEHGSIDLSEFQFAPTQTKELEEKVAELHKTHRGLSPAQADSQFLENAKRLSMYGVDLHHAKDSEGVDIKLGVCANGLLIYKDRLRINRFAWPKILKISYKRSNFYIKVR-PAELEQFESTIGFKLPNHRAAKRLWKVCVEHHTFYRLVSPEQPPK-AKFLTLGSKFRYSGRTQAQTR-QASTLIDRPAPHFERTSSKR 546
The following BLAST results are available for this feature:
BLAST of TCONS_00019922 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
E41L21.403e-6740.17Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2... [more]
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