TCONS_00019931 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019931
Unique NameTCONS_00019931
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2136

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019931 ID=TCONS_00019931|Name=TCONS_00019931|organism=Clytia hemisphaerica|type=transcript|length=2136bp
GTTGGATATTCATAAAGATATGAAACATCAGTTGGGAGatTCTAAAGCAG
AATTTTTATTTCGGGTCAAATTCTATGAGCCTGAGCCCAGCAAAATTCAA
GAAGATCATTTAAGATATTTACTTTATCTCCAGATTAGAGAAGATTTATC
AGAAAAAAGattAAAATGCACAGAAGAAGTAATTGCTCAACTTGGTGCAT
ATACTGCACAAgcTGAAGTAGGAGACTTCAATTTATCAGAGCATGAGCAT
GATTACTTGAAAGATTATGAGTTTGCTGAGAATACCGATATACTTGAAAG
AATCAATTTATTGCACAAACAACACAGGGGTCAAACACCTTTACAAGCTG
AACTTAACTTTTTGGAAATTGCCAAAAAGATTCCTAGATATGGAGTGGAC
GTACATGATGCCATGGATACCAATGGGCATGTAGAGATTGGTATTGCTGC
TTTAGGAATAAACATCTATCGGGATGGAAAGCGTGAACAGCTTTTCAGAT
GGCAAAATATGCATGACTTCAATTACAACCGAAGAAAATTCACCATTAAA
CTCAAACAACCAGTGAGCGACAATGACAATAAGAAGAATTACGTATATTA
TTTCGAATCTGCTAAAAGCTGCAAACAATGCTACAAAGTGGCTGTTGAAT
ATCATTCTTTCTTCCGATTGACAAGACCTGATGCTCCACGAAAACGTGCT
GACACCTTGAAAATGGGATCTAGCTTCAGATACAgTGATCGAACCTTGTA
TCAACTGAGATACCAAAAAGGTGATGAAGCACCTAAAAATGCTGCCAACT
TCAAACGAACGCCAAGCACAAGGAAGACATTACCTCCTTCTTACAAAACA
CCGTTGATTGAACCTGAAGTGCCATTCATTGAACCAACTAAAGTGGCACC
ACTTGAAGAAGAACCAGTCCACTATGAAGAAGTACCAGTCCAATACGAAG
AAGTAGAGTTCGATGAAGCCAATCCTGATGATGATAACTTTGATCCtgag
GAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATT
CCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCCAAGAGTGGGA
AATCTCTAGTCGAAGAACCAGTTCAATATTATGAAGAAGTGGAAGTTGAT
GAAGCCAATCCTGATGATGATAAATTTGATCCTAAGGAATGGGAAACGGT
CGAGAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACGTAATA
TCGTTCTTAATGTTGTGAAGAAACCAAAGATTGGGAAATCTCCAGTCGAA
GAACCAGTTCAATATAATGAAGAAGTAGAGTTCGATGAAGCCAATCCTGA
TGATGATAAATATGATCCTGAGGAATGGGAAACAGTCGAGAAGAAGATGC
CTGATGGTTCAAAGAAGAAATTCCGCCGACGAATTATTGTTCTTAATGTT
GTGAAGAAACAAAAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGTTCA
ATATGAACAAGTGGAAGTTGATGAAGCCAATCCTGATGATGATAAATTTG
ATCCTAAGGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAG
AAGAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAA
GATTGGGAAATCTCCAGTCGAAGAACCCATTCAATATAATGAAGAAGTGG
AAGTCGATGAAGCCAATCCTGATGATGATAAATATGATCCTGAGGAATGG
GAAACAGTCGAGAAGACGATGCCTGATGGTTCGAAGAAGAAATTCCGCCG
ACGAATCATTGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGAGATGAGG
AGAAACCGTCAGAAGTCGACGAAGAACCCATCGAATATGAAGAAGTTGAA
ATTGATGAAGCCAACCCTCAAGATGATCAATTTGATCCAAAAgagTGGGA
AGTTGTGGAGAAAGAAAAACCGAATGGCGACAAAGTACGCGTCAGACGGC
GTCGTGTCGTCATTTTGAAGATCGTGAAGGAGCCTGAAGATCTGGTGAAT
GAAAATGAAGTGACTGTCGAAGAAATGCCACTCAATGAAAATGCTCCAAC
ACAAGAAGATGATGACAAGTTTGACCCTGAGGTAAA
Run BLAST on NCBI

transcript from alignment at sc0000339:288681..298726+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019931 ID=TCONS_00019931|Name=TCONS_00019931|organism=Clytia hemisphaerica|type=transcript|length=10046bp|location=Sequence derived from alignment at sc0000339:288681..298726+ (Clytia hemisphaerica)
GTTGGATATTCATAAAGATATGAAACATCAGTTGGGAGGTTGGTACTTCT
TCAGTtttgtttttggaattttttttagtgaaaatctttaaattatGCAT
AACTTGCCCATTTCATTTCTCTTTATGAATTATTTAGCAAGGAAGAGGTG
TTTTCAAATgtgctttttatttatttcagatTCTAAAGCAGAATTTTTAT
TTCGGGTCAAATTCTATGAGCCTGAGCCCAGCAAAATTCAAGAAGATCAT
TTAAGGTTTGTTATTTGTTTTCCCCTTTCtatacaaaaatgtttttgttt
gaccCAGCTTTATATTTTTTGCTCAAGTCTCAATATATTGACTGAATTAT
TTACTCAAtgcaaattcaaattcaaaaacaaatgttttttattcctttta
atgattttagtgaaacaggtttttaaattttggaattcttttgaaaccca
ttaaatttttgtgttttcagATATTTACTTTATCTCCAGATTAGAGAAGA
TTTATCAGAAAAAAGGTAAATAATGTTTATCTAGTTAACAAATTGTGTTG
GTATAGGTTTCCATGGAGAAGTTGGATTACAGCTTATTctaattaatgta
attaaagtATATCCTTTAATCATCAAAATTACTTGGCACTTAGCAGCCAT
ATTATTGATTTTAAtgacatcatttttttctttaagattAAAATGCACAG
AAGAAGTAATTGCTCAACTTGGTGCATATACTGCACAAggtaaatttgtt
ttaaaacctTTGGCAATGTGTCATTATTTAATGTTTGTTTTTAGTCAATT
GCACCCTGTCAACCAAAGTTTAAAAGTCTTAACTgatatttttcaacatt
taaaaaattgagattcCAATACATATATAAAAGTATTTACTTGGGATAGT
TAAGTCATGTTTATTAAAacttatttgaaatttcaattgatattttttca
gcTGAAGTAGGAGACTTCAATTTATCAGAGCATGAGCATGATTACTTGAA
AGATTATGAGTTTGCTGAGGTAAGTAAAGTCTATACCAACAAATAACATG
ATTCCTTAAGCTGAAATCACCCTAAAGGAACTCTTTAAtgaaaaagtcat
tttcttACCATAGAATACCGATATACTTGAAAGAATCAATTTATTGCACA
AACAACACAGGtattcattttcttcatttttgattcAGTTCCAACCTTCT
CTTGTACTTTTTTCACTGGATAATGCAATGGATAGATGGATTTTACTTAA
ACTTCGCATAAATGTCTTCATAATAATTACTCTTACTTTTTTATTTAGGG
GTCAAACACCTTTACAAGCTGAACTTAACTTTTTGGAAATTGCCAAAAAG
ATTCCTAGATATGGAGTGGACGTACATGATGCCATGGTAGGTATTTTAAG
AACAAAATGAAGTTTAAGCAACCCAAACAACCTTTTAATGTCTTAAATGT
AAGCTTATGTTCAAATATTGAATGTTCTTTTTTTGTCTTTAGGATACCAA
TGGGCATGTAGAGATTGGTATTGCTGCTTTAGGAATAAACATCTATCGGG
ATGGAAAGCGTGAACAGCTTTTCAGATGGCAAAATATGCATGACTTCAAT
TACAACCGAAGAAAATTCACCATTAAACTCAAACAACCAGTGGTACGTAT
GCTTTTCCTTTAGCTGAAAGTAATTCTATTTTAATTTTGTAAAGCGTCAC
AtgtttctaaaatattcagtaattttaaatgttttatttcaGAGCGACAA
TGACAATAAGAAGAATTACGTATATTATTTCGAATCTGCTAAAAGCTGCA
AACAATGCTACAAAGTGGCTGTTGAATATCATTCTTTCTTCCGATTGACA
AGACCTGATGCTCCACGAAAACGTGCTGACACCTTGAAAATGGGATCTAG
CTTCAGATACAggtataaaaaattgttttcacaaaatatttatttcaccA
CTAACTCCACTTCTATCTCAACTAAAGTGAAAACATTGTCACTAAATCAC
TCAACTCAATTTTTATGTTTCTAAATTAGAAGGTTGATTTaatgcatgtt
ttttttataacaacatccaaaaaattttaagccttcggaatcggatgttc
ttaactttttcatttttaagcctaagaatgttcttaaaatcttcttaatt
tctacattttttgagtgtttttgtgcaattttgaaagaaatcgagtgttt
tagagcccatgaagccttaaaatgttgttaACTTGTTCTTACTTAACACT
TTGGTCATCGAATATGTTCTtatcttatatagtttgttcttattaaaaaa
gcgtgtatgttcTTTCTTTTCAGTGATCGAACCTTGTATCAACTGAGATA
CCAAAAAGGTGATGAAGCACCTAAAAATGCTGCCAACTTCAAACGAACGC
CAAGCACAAGGAAGACATTACCTCCTTCTTACAAAACACCGTTGATTGAA
CCTGAAGTGCCATTCATTGAACCAACTAAAGGTAGTTTATTCTTCTTTGG
AAATGTAAATTAATGCTTATTTCTGGTTTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTTGTTTTCTTTAAGATTAAAATGCACAGAAGA
AGTAATTGCTCAACTTGGTGCATATACTGCACAAggtaaatttgttttaa
aacctTTGGCAATGTGTCATTATTTAATGTTTGTTTTTAGTCAATTGCAC
CCTGTCAACCAAAGTTTAAAAGTCTTAACTgatatttttcaacatttaaa
aaattgagattcCAATACATATATAAAAGTATTTACTTGGGATAGTTAAG
TCATGTTTATTAAAacttatttgaaatttcaattgatattttttcagcTG
AAGTAGGAGACTTCAATTTATCAGAGCATGAGCATGATTACTTGAAAGAT
TATGAGTTTGCTGAGGTAAGTAAAGTCTATACCAACAAATAACATGATTC
CTTAAGCTGAAATCACCCTAAAGGAACTCTTTAAtgaaaaagtcattttc
ttACCATAGAATACCGATATACTTGAAAGAATCAATTTATTGCACAAACA
ACACAGGtattcattttcttcatttttgattcAGTTCCAACCTTCTCTTG
TACTTTTTTCACTGGATAATGCAATGGATAGATGGATTTTACTTAAACTT
CGCATAAATGTCTTCATAATAATTACTCTTACTTTTTTATTTAGGGGTCA
AACACCTTTACAAGCTGAACTTAACTTTTTGGAAATTGCCAAAAAGATTC
CTAGATATGGAGTGGACGTACATGATGCCATGGTAGGTATTTTAAGAACA
AATGAAGTTTAAGCAACCCAAACAACCTTTTAATGTCTTAAATGTAAGCT
TATGTTCAAATATtaaatgttctttttttgtCTTTAGGATACCAATGGGC
ATGTAGAGATTGGTATTGCTGCTTTAGGAATAAACATCTATCGGGATGGA
AAGCGTGAACAGCTTTTCAGATGGCAAAATATGCATGACTTCAATTACAA
CCGAAGAAAATTCACCATTAAACTCAAACAACCAGTGGTACGTATGCTTT
TCCTTTAGCTGAAAGTAATTCTATTTTAATTTTGTAAAGCGTCACATGTT
TCTAAAACATTCagtaattttaaatgttttatttcaGAGCGACAATGACA
ATAAGAAGAATTACGTATATTATTTCGAATCTGCTAAAAGCTGCAAACAA
TGCTACAAAGTGGCTGTTGAATATCATTCTTTCTTCCGATTGACAAGACC
TGATGCTCCACGAAAACGTGCTGACACCTTGAAAATGGGATCTAGCTTCA
GATACAggtataaaaaattgttttcacaaaatatttatttcaccACTAAC
TCCACTTCTATCTCAACTAAAGTGAAAACATTGTCACTAAATCACTCAAC
TCAATTTTTATGTTTCTAAATTAGAAGGTTGATTTaatgcatgttttttt
tataacaacatccaaaaattttaagcTTTCGGAATCGgatcttcttaact
ttttcagttttaagcctaagaatgttcttaaaatcttcttaatttctaca
ttttttgagtgtttttgtgcaattttgaaagaaatcgagtgttttagagc
ccatgaagccttaaaatgttgttaACTTGTTCTTACTTAACACTTTGGTC
ATCGAATATGTTCTtatcttatatagtttgttcttattaaaaaagcgtgt
atgttcTTTCTTTTCAGTGATCGAACCTTGTATCAACTGAGATACCAAAA
AGGTGATGAAGCACCTAAAAATGCTGCCAACTTCAAACGAACGCCAAGCA
CAAGGAAGACATTACCTCCTTCTTACAAAACACCGTTGATTGAACCTGAA
GTGCCATTCATTGAACCAACTAAAGGTAGTTTATTCTTCTTTGGAAATGT
AAATTAATGCTTATttctggtttttacacaaaaaattGTGGTTGGAATAT
ATGTCTGGAGACTGAAGActaaattttcaaatctttttccttTAGTGGCA
CCACTTGAAGAAGAACCAGTCCACTATGAAGAAGTACCAGTCCAATACGA
AGAAGTAGAGTTCGATGAAGCCAATCCTGATGATGATAACTTTGATCCtg
aggtattttttattttggggAGCCTTTCGATGCTATTCTACAGTTTACTA
CAGTTGAATTAGTTCAGTTTTTTTtgctggaaatttttttatcttttcgt
TTTATGAGAAACTTGGATTCATAAGAAACTTGAAGAACTTTTTATTAAAT
CTTCAAAGTCATTGAAAACTTTATCACTTTCCTCTAGGAATGGGAAACAG
TTGAGAAGACGATGCCTGATGGTTCGAAGAAGAAATCCCGTCGACGGGTC
ATCGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTTGA
AGAACCAGTTCAATATTATGAAGAAGTGGAAGTCGATGAAGCCAATCCTG
ATGATGATAAATTTGATCCTAAGGTATATTGTTAGCACAGAATTTCCTTT
TCCGAAATCTTCAGTGTGACCTGAAGATCTGGAAAACGAtaagattttgc
tgaaattttgcctACTCTGACatgtcttttttttcctttNCGGATTTGGC
TTATATTTTGCGCACTCTGACATGTCTCTATtcctttttttgcttgagac
gAGCTTTGTACGATAGCTTCGCGTTCTTATCAATTTATAATATACTAAAT
TTAAGCCCATTCGACTATGAAATAAAAAGTTGCCAATGTCTTTCATCTGC
TTTCACTGCATTTTGAACTCAATCAACTTCACTTACTTTCGTCTTCTTCA
GGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAAT
TCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCCAAGAGTGGG
AAATCTCTAGTCGAAGAACCAGTTCAATATTATGAAGAAGTGGAAGTTGA
TGAAGCCAATCCTGATGATGATAAATTTGATCCTAAGGTATCGTTAGCAc
agaatttcttttttctaaaaacatcGGGGTGACCTGGAGATTGGGGGAAC
GATCGGATTTGGCTTATATTTTGCGCACTCTGACATGTCTCTATtccttt
ttttgcttgagacgAGCTTTGTACGATAGCTTCGCGTTCTTATCAATTTA
TAATATACTAAATTTAAGCCCATTCGACTATGAAATAAAAAGTTGCCAAT
GTCTTTCATCTGCTTTCACTGCATTTTGAACTCAATCAACTTCACTTACT
TTCGTCTTCTTCAGGAATGGGAAACGGTCGAGAATACGATGCCTGATGGT
TCGAAGAAGAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAA
ACCCAAGAGTGGGAAATCTCTAGTCGAAGAACCAGTTCAATATTATGAAG
AAGTGGAAGTTGATGAAGCCAATCCTGATGATGATAAATTTGATCCTAAG
GTATCGTTAGCAcagaatttcttttttctaaaaacatcGGGGTGACCTGG
AGATTCGGAGAACGATCGCATTTGGCTGAAGTTTTGCGCACTCTGACATg
tctctatttctttttttgcttgagacgAGCTTTGTACGATAGCTTCGCGT
TCTTAGTTATtgagaaaatattgaatttaagCCCATTCGACTATGAAATA
AGTTGTCAATGTCTTTCACTGCAATATGAAGTCACTCAACTTCacttact
ttcgttttcttcagGAATGGGAAACGGTCGAGAATACGATGCCTGATGGT
TCGAAGAAGAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAA
ACCAAAGATTGGGAAATCTCCAGTCGAAGAACCAGTTCAATATAATGAAG
AAGTAGAGTTCGATGAAGCCAATCCTGATGATGATAAATATGATCCTGAG
GTATTTTTTATTTGGGGAAAGCctttcaatgcaattttacaGGTGACGAG
TTCAGTATTTTTTGCTGGAATTTTTTACGTCTTTTcgttttataagaaat
ttttcaaaatcattttaaactTTCTCATTTTCCTCTAGGAATGGGAAACA
GTCGAGAAGAAGATGCCTGATGGTTCAAAGAAGAAATTCCGCCGACGAAT
TATTGTTCTTAATGTTGTGAAGAAACAAAAGAGTGGGAAATCTCCAGTCG
AGGAAGAACCAGTTCAATATGAACAAGTGGAAGTTGATGAAGCCAATCCT
GATGATGATAAATTTGATCCTAAGGTATCGTTAGCAcagaatttcttttt
tctaaaaacatcGGGGTGACCTGGAGATTCGGAGAACGATCGCATTTGGC
TGAAGTTTTGCGCACTCTGACATgtctctatttctttttttgcttgagac
gAGCTNGGGGGAACGATCGGATTTGGCTTATATTTTGCGCACTCTGACAT
GTCTCTATtcctttttttgcttgagacgAGCTTTGTACGATAGCTTCGCG
TTCTTATCAATTTATAATATACTAAATTTAAGCCCATTCGACTATGAAAT
AAAAAGTTGCCAATGTCTTTCATCTGCTTTCACTGCATTTTGAACTCAAT
CAACTTCACTTACTTTCGTCTTCTTCAGGAATGGGAAACAGTCGAGAATA
CGATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACGTAATATCGTTCTT
AATGTTGTGAAGAAACCCAAGAGTGGGAAATCTCTAGTCGAAGAACCAGT
TCAATATTATGAAGAAGTGGAAGTTGATGAAGCCAATCCTGATGATGATA
AATTTGATCCTAAGGTATCGTTAGCAcagaatttcttttttctaaaaaca
tcGGGGTGACCTGGAGATTCGGAGAACGATCGCATTTGGCTGAAGTTTTG
CGCACTCTGACATgtctctatttctttttttgcttgagacgAGCTTTGTA
CGATAGCTTCGCGTTCTTAGTTATtgagaaaatattgaatttaagCCCAT
TCGACTATGAAATAAAAAGTTGCCAATGTCTTTCACCTGCTTTCACTGCA
ATATGAAGTCACTCAACTTCacttactttcgttttcttcagGAATGGGAA
ACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACG
TAATATCGTTCTTAATGTTGTGAAGAAACCAAAGATTGGGAAATCTCCAG
TCGAAGAACCCATTCAATATAATGAAGAAGTGGAAGTCGATGAAGCCAAT
CCTGATGATGATAAATATGATCCTGAGGTATGTTTTTTTTGGGGAAAcct
ttcactgaaatttcaggCAATTTTACAGTTTGCAGGTGACGAGTTCAGTA
TTTTTGCTGGAATTTTTTACGTctctttgttttataagaaacttttcaaa
atcattttaaactTTCTCATTTTCCTCTAGGAATGGGAAACAGTCGAGAA
GAAGATGCCTGATGGTTCAAAGAAAAAGTTCCGCCGACGAACCATTGTTC
TTAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTCGAGGAAGAA
CCAGTTCAATATGAAGAAGTGGAAGTTGATGAAGCAAATCCTGATGATGA
TAAATATGATCCTAAGGTATAGTTAGCACAGAATTTCTTTCTCTCTCTCA
CTTTAAAGCCAATATTGTGCATCTCCGAGTCATTTGATGTTTTTCAGGTC
TCAAACGAGCCAGGTCTACTCAAAtttacattatttttcaaatatctcCT
CTAGGAATGGGAAACAGTCGAGAAGACGATGCCTGATGGTTCGAANGTTG
TCAATGTCTTTCACTGCAATATGAAGTCACTCAACTTCacttactttcgt
tttcttcagGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAA
GAAGAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAA
AGATTGGGAAATCTCCAGTCGAAGAACCCATTCAATATAATGAAGAAGTG
GAAGTCGATGAAGCCAATCCTGATGATGATAAATATGATCCTGAGGTATG
TTTTTTTTGGGGAAAcctttcactgaaatttcaggCAATTTTACAGTTTG
CAGGTGACGAGTTCAGTATTTTTGCTGGAATTTTTTACgtctttttgttt
tataagaaacttttcaaaatcattttaaactTTCTCATTTTCCTCTAGGA
ATGGGAAACAGTCGAGAAGAAGATGCCTGATGGTTCAAAGAAGAAATTCC
GCCGACGAACCATTGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGGAAA
TCTCCAGTCGAGGAAGAACCAGTTCAATATGAAGAAGTGGAAGTTGATGA
GGCAAATCCTGATGATGATAAATTTGATCCTAAGGTATTGTTTGCACAGA
AtttctttctctctctctcacTTTAAAGCCAATATTGTGCATCTCCGAGT
CATTTGATGTTTTTCAGGTCTCAAACGAGCCAGATCTACTcaaatttaca
atatttttcaaatatctcCTCTAGGAATGGGAAACAGTCGAGAAGACGAT
GCCTGATGGTTCGAAGAAGAAATTCCGCCGACGAATTATTGTTCTTAATG
TTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGTT
CAATATGAAGAAGTGGAAGTTGATGAAGCAAATCCTGATGATGATAAATA
TGATCCTAAGGTATAGTTAGCACAGAATTTCTTTCTCTCTCTCACTTTAA
AGCCAATATTGTGCATCTCCGAGTCATTTGATGTTTTTCAGGTCTCAAAC
GAGCCAGGTCTACTCAAAtttacattatttttcaaatatctcCTCTAGGA
ATGGGAAACAGTCGAGAAGACGATGCCTGATGGTTCGAAGAAGAAATTCC
GCCGACGAATCATTGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGAGAT
GAGGAGAAACCGTCAGAAGTCGACGAAGAACCCATCGAATATGAAGAAGT
TGAAATTGATGAAGCCAACCCTCAAGATGATCAATTTGATCCAAAAGTAA
ATAATTGATGTGACTTTCTTCAGTTTCTCTTACTTCATTACCTATGCCAC
ATTTTGACATCTTgttttttacaatttcttaacTTAACTTGATACATCAC
ATTTTAGGCTTCCCAggcagtcacaacttaaccatcttttaatttttttt
aggagTGGGAAGTTGTGGAGAAAGAAAAACCGAATGGCGACAAAGTACGC
GTCAGACGGCGTCGTGTCGTCATTTTGAAGATCGTGAAGGAGCCTGAAGA
TCTGGTGAATGAAAATGAAGTGACTGTCGAAGAAATGCCACTCAATGAAA
ATGCTCCAACACAAGAAGATGATGACAAGTTTGACCCTGAGGTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011193XLOC_011193Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019931-exon-sc0000339-1491911889:288681..288718TCONS_00019931-exon-sc0000339-1491911889:288681..288718Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:288681..288718TCONS_00019931-exon-sc0000339-1510915933:288681..288718Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:288681..288718TCONS_00019931-exon-sc0000339-1575043694:288681..288718Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:288860..288935TCONS_00019931-exon-sc0000339-1491911889:288860..288935Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:288860..288935TCONS_00019931-exon-sc0000339-1510915933:288860..288935Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:288860..288935TCONS_00019931-exon-sc0000339-1575043694:288860..288935Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:289151..289195TCONS_00019931-exon-sc0000339-1491911889:289151..289195Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:289151..289195TCONS_00019931-exon-sc0000339-1510915933:289151..289195Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:289151..289195TCONS_00019931-exon-sc0000339-1575043694:289151..289195Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:289367..289419TCONS_00019931-exon-sc0000339-1491911889:289367..289419Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:289367..289419TCONS_00019931-exon-sc0000339-1510915933:289367..289419Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:289367..289419TCONS_00019931-exon-sc0000339-1575043694:289367..289419Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:291728..291795TCONS_00019931-exon-sc0000339-1491911889:291728..291795Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:291728..291795TCONS_00019931-exon-sc0000339-1510915933:291728..291795Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:291728..291795TCONS_00019931-exon-sc0000339-1575043694:291728..291795Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:291890..291936TCONS_00019931-exon-sc0000339-1491911889:291890..291936Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:291890..291936TCONS_00019931-exon-sc0000339-1510915933:291890..291936Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:291890..291936TCONS_00019931-exon-sc0000339-1575043694:291890..291936Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:292075..292162TCONS_00019931-exon-sc0000339-1491911889:292075..292162Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:292075..292162TCONS_00019931-exon-sc0000339-1510915933:292075..292162Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:292075..292162TCONS_00019931-exon-sc0000339-1575043694:292075..292162Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:292268..292417TCONS_00019931-exon-sc0000339-1491911889:292268..292417Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:292268..292417TCONS_00019931-exon-sc0000339-1510915933:292268..292417Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:292268..292417TCONS_00019931-exon-sc0000339-1575043694:292268..292417Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:292518..292687TCONS_00019931-exon-sc0000339-1491911889:292518..292687Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:292518..292687TCONS_00019931-exon-sc0000339-1510915933:292518..292687Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:292518..292687TCONS_00019931-exon-sc0000339-1575043694:292518..292687Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:293098..293255TCONS_00019931-exon-sc0000339-1491911889:293098..293255Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:293098..293255TCONS_00019931-exon-sc0000339-1510915933:293098..293255Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:293098..293255TCONS_00019931-exon-sc0000339-1575043694:293098..293255Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:293376..293482TCONS_00019931-exon-sc0000339-1491911889:293376..293482Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:293376..293482TCONS_00019931-exon-sc0000339-1510915933:293376..293482Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:293376..293482TCONS_00019931-exon-sc0000339-1575043694:293376..293482Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:294182..294367TCONS_00019931-exon-sc0000339-1491911889:294182..294367Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:294182..294367TCONS_00019931-exon-sc0000339-1510915933:294182..294367Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:294182..294367TCONS_00019931-exon-sc0000339-1575043694:294182..294367Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:295095..295280TCONS_00019931-exon-sc0000339-1491911889:295095..295280Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:295095..295280TCONS_00019931-exon-sc0000339-1510915933:295095..295280Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:295095..295280TCONS_00019931-exon-sc0000339-1575043694:295095..295280Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:295419..295604TCONS_00019931-exon-sc0000339-1491911889:295419..295604Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:295419..295604TCONS_00019931-exon-sc0000339-1510915933:295419..295604Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:295419..295604TCONS_00019931-exon-sc0000339-1575043694:295419..295604Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:297190..297375TCONS_00019931-exon-sc0000339-1491911889:297190..297375Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:297190..297375TCONS_00019931-exon-sc0000339-1510915933:297190..297375Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:297190..297375TCONS_00019931-exon-sc0000339-1575043694:297190..297375Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:298179..298376TCONS_00019931-exon-sc0000339-1491911889:298179..298376Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:298179..298376TCONS_00019931-exon-sc0000339-1510915933:298179..298376Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:298179..298376TCONS_00019931-exon-sc0000339-1575043694:298179..298376Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1491911889:298533..298726TCONS_00019931-exon-sc0000339-1491911889:298533..298726Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1510915933:298533..298726TCONS_00019931-exon-sc0000339-1510915933:298533..298726Clytia hemisphaericaexon
TCONS_00019931-exon-sc0000339-1575043694:298533..298726TCONS_00019931-exon-sc0000339-1575043694:298533..298726Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000339supercontigsc0000339:288681..298726 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.12485	0.669438	1.19159	0	0.4763	0.30475	0.133118	7.76166e-10	0	0	0.0410982	0	0	0.192596	5.29138e-05	0	0	0	0	0	0	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00019931 vs. Swiss-Prot (Human)
Match: E41L3 (Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 2.468e-53
Identity = 111/280 (39.64%), Postives = 167/280 (59.64%), Query Frame = 2 
Query:    2 LDIHKDMKHQLGDSKAEFLFRVKFYEPEPSKIQEDHLRYLLYLQIREDLSEKRLKCTEEVIAQLGAYTAQAEVGDFNLSEHEHDYLKDYEFAEN--TDILERINLLHKQHRGQTPLQAELNFLEIAKKIPRYGVDVHDAMDTNG-HVEIGIAALGINIYRDGKREQLFRWQNMHDFNYNRRKFTIKLKQPVSDNDNKKNYVYYFESAKSCKQCYKVAVEYHSFFRLTRPDAPRKRADTLKMGSSFRYSDRTLYQLRYQKGDEAPKNAANFKRTPSTRKTL 832
            LD  K++K Q+      F F VKFY P+P+++ ED  RY L LQ+R+D+   RL C+   +A LG+YT Q+E+GD++  E   DY+ ++ FA N   ++ +++  LHK HRG TP +AE++FLE AKK+  YGVD+H A D+ G  + +G+ A G+ IYRD  R   F W  +   +Y R  F IK++ P      +    +   + ++ K+ +KV VE+H+FFRL  P+AP K+   L +GS FRYS RT  Q R +      + A  F+R+ S R T+
Sbjct:  165 LDPAKEIKKQVRSGAWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQSELGDYDPDECGSDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIR-PGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKKF--LTLGSKFRYSGRTQAQTR-RASALIDRPAPYFERSSSKRYTM 440
The following BLAST results are available for this feature:
BLAST of TCONS_00019931 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
E41L32.468e-5339.64Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3... [more]
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