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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020059 ID=TCONS_00020059|Name=TCONS_00020059|organism=Clytia hemisphaerica|type=transcript|length=3251bp
ACTTAATCTTTTTTAGGAGagtaaaaatgaacaaattcaCAAATATTACC
CTGTTTATATTTTTCAGTTGAGAAACAAGAATATTATAAAAGTATGGGAC
CTGAAGAAGATCCAATCAGTATCTTTCTCGTCATCTCTGGCAGTCGTGGC
CAAAGAATGCTTTTCAGATATCCATTCCAAGAAACCAGTGTTTCTTACGG
TAAAAGTATCAATTCTCCACAACGCATCAAATCCATCAGTGAAGATATCT
TTCAAAATCCATACCGATTGAATACTCAATCTTCAAGCAATCAAGAATCA
ACTAAGAATCAATCTGTTTTGAATGGAGGTTCGATATACGGTTTCAGTGA
TAGTGAACTTGCTTCTTTGATGGCACCAAAATCCATCTTGTGTGATCAGA
AGTTTGAATTGAAAATCGGTCACGTGAAATTGATTGGTTATCCTGTGCAA
GTGCGAACAGATGGCACATGCTCTGGCTTTCAGGACCTGTTGGAGTTGGA
AAGTCTGGATAATGACGTCATGATTAATATGGTAAATGTTGTCATGGCAA
TTCATGCCAATGTTGACGCCACTGTCGCGTcgcattatcaaaatatttgt
aTGATGCTGGGAAAAGCTTTACGACATGAAGAAAAGAGgGTACGATATCT
GTCCAACCAGCACGAGATCATGGTCTTAGAAATCGATCGTATCGAAGACC
TCCCCGAATCTGAACAAAACGTTCACGAAAGAACGCTGGCAAAAAGTCAA
CTGGCCAAAGACATCGTATCTGCGTTCCAATCGATGTGTGATTACGGCAT
TGTCAACATCAACGTTAACGGATGGCTTGGTCTTAATTACTGTTTTCCTC
ACAAAATCCATAAAGCGGAGATTCGGGAGACGATGATTGATACATCAAAA
TTCAATACTTACATCCGCAGAATCAAACCCTACCACACTCTCCTTCTCAC
TGACGATGACGACAATGAACATGAAGAAAATGAGATTGCAAACCTCATCA
AAATCCTTCCTCCCGATGCTTCTCCCGTGCTACACCGACTAATCACTTTA
TCCCGACCTGTCAAGAACTTCCAAACACTTTGCCAAGATGCTGACATCTC
CTTACCACAAATCTTTCAAATAGTTGCTCATTTGATTTATTGGGGTAAAT
GTATTGTTATCTATCCTTTAGCTGAAAGCAATATTTATGTTCTTGCTGAG
AGTGTTCCCACTGAAATTGATTCTAAATGTTCTGAGGAATTCACGAAGAA
ATTCCCTGAACAATCACTTCATAACGTGTTTCAAAAGTTCTCCTTTCCGT
TAACCCTGGGTGACTATCGAAATCCATTATGTAATGATAAGCATGTTGAG
CATGCGCAAATAGTCACGTGGTTACTGAAAAAGAGGCTGATCAAACAGCT
TCATACGTTTGTTTACATGGTTCCCATGGCAGCCATTGATTTAGAACGTG
ACAACGAGATCGACCCGGTGGAGCAGAGAAATACATTTTTCCAACGGTTT
CAGTTAAAAGGGACTGGAGACAAAACTATATTTGATGCTTTCCCCGTCGC
CATGCAGTTAAGTATAATTTCTGTGTCGTACCTCGTTGAACGTGATGATA
TGCTGTTCTTTTTGCGgatgacaaaatattttgatggtGAACATCACCTA
GAGAACATCATGTATTTCGAGAATGTTTCTCGCTCCAAACTGATTATTTG
CATTGATAAGTTTCGAAGTATTTTGATCACTGTGCAGCACCAAGATGCAG
CCACAGTGCAATTGGCTTAAATTTATTACCTGTAGGGGGCCCCCATGCTC
TCCATTACTTTGATAATTGAATGCATTTTCTTGCTAGTTCTCTTCTTTTC
AACGAGTATCTCGTtgtctttcttataaaaactacAATTTTGTTATTAGA
GTCAATTTAAATTATCATAATCTATGTCTGGATTAAATATGGTATTTTTG
ATGCATTGTGTGACTGCTACCATATGTAGTACAAACCATAGCCTTTTGAA
GAATAATGACTACTAGaggaatatttttgtttatatttttattaactttt
cgaaaattttataTAGATAATACTTTACTACATCAAGATAATGATAACTT
TATTATAAGATATTTTCATTCGATTTTATTTACACAGAATCTGGACGtaa
tttgaatgttttggtCCATTAAGGcctttgttaaaagtcaagaaTTCTAT
TTTGTTCTATATCAAGTTTATTTTGACTATTCTGTGAGCCCATTAGAGAA
CCTAACTGCTTCGAAAGACACTATCTGCCCTTCTGCTCATTGGCAATGTT
ATTGATTATCCATGAGGTAACAGACCAAGATTTCCTCTTTTGGCTTCATC
CTTGACGTAAATGTTTTCATTGAATGGTGAATAGTTGGATTGGATGAAGG
TTTAGAGAACCGCTGTTTGTGGGCCCTGATGTTCCTGTTCATGATGCGGC
NGTTTAGAGAACCGCTGTCTGTGGTCCCTGATGTTCATGTTCGTGATGCG
GCTGTTCGCCTTGTTTCGGTACCGTGAACATAGCCTCGTCATGAGGTCGA
AACATGTTTTGAAGATTGCCGTTTCTCGCTTCTTGTTGATCTGGCTGTTG
TTGGAGACCGCGCCCGCTTCCTGTCAACGTCTTGTCGGAGGTGAACACCA
ACTTGGGTCCCGAATCTTGCTTGCTAAGTTGAATTTTGTTTCCGTTAGCA
TAAGGGTCCGCCATTATTGGGTTTCCATAGTTACCAGGATCAACAATAAG
GCTTGAGAAATTATCACGAGAGATTTTTGGGACGACATTTGCGTGTCGCA
TCGCTGGTGTGTGGGCGTCGCTTAACAATGTCAGACGTTGCACCTTGGGT
GGCTGGCGGCCCCACATTAACTTCGGATCTACTTTTCGTTCCTGGATgta
gaaattaaagaaatctCGAAAAGCTTTCCAGACGTGTTCGCACGTTTTAT
TgttattaaaatgaaatttatgTTTGCTTTTCTCCCCTTCTCTCATGACG
CGGAACCAGAAAATGGAATTAATGTAGCCAACATTCCAAATTTCCATCCA
ATTAAAAATATCCAACTTCACTGAATTTTGATATAATCCGATCCCAATCG
GACCCAGGGTGAGGGTCAACCTCTTGAGGCCCGGTTGAGCATCAGAGCGC
ACGTGGTAGATCTCTTGACTGTAGTAAGTGACTGTGAGTGCTTTCTCCAT
CAGTTTCATTTCGCACGTGGGTGGATCCATCCCTCCCATGTGTGTGTAAA
T Run BLAST on NCBI protein sequence of TCONS_00020059-protein >TCONS_00020059-protein ID=TCONS_00020059-protein|Name=TCONS_00020059-protein|organism=Clytia hemisphaerica|type=polypeptide|length=558bp
MGPEEDPISIFLVISGSRGQRMLFRYPFQETSVSYGKSINSPQRIKSISE
DIFQNPYRLNTQSSSNQESTKNQSVLNGGSIYGFSDSELASLMAPKSILC
DQKFELKIGHVKLIGYPVQVRTDGTCSGFQDLLELESLDNDVMINMVNVV
MAIHANVDATVASHYQNICMMLGKALRHEEKRVRYLSNQHEIMVLEIDRI
EDLPESEQNVHERTLAKSQLAKDIVSAFQSMCDYGIVNINVNGWLGLNYC
FPHKIHKAEIRETMIDTSKFNTYIRRIKPYHTLLLTDDDDNEHEENEIAN
LIKILPPDASPVLHRLITLSRPVKNFQTLCQDADISLPQIFQIVAHLIYW
GKCIVIYPLAESNIYVLAESVPTEIDSKCSEEFTKKFPEQSLHNVFQKFS
FPLTLGDYRNPLCNDKHVEHAQIVTWLLKKRLIKQLHTFVYMVPMAAIDL
ERDNEIDPVEQRNTFFQRFQLKGTGDKTIFDAFPVAMQLSIISVSYLVER
DDMLFFLRMTKYFDGEHHLENIMYFENVSRSKLIICIDKFRSILITVQHQ
DAATVQLA Run BLAST on NCBI transcript from alignment at sc0000348:80542..84376- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020059 ID=TCONS_00020059|Name=TCONS_00020059|organism=Clytia hemisphaerica|type=transcript|length=3835bp|location=Sequence derived from alignment at sc0000348:80542..84376- (Clytia hemisphaerica)
ACTTAATCTTTTTTAGGAGAGTAAAAATGAACAAATTCACAAATATTACC
CTGTTTATATTTTTCAGTTGAGAAACAAGAATATTATAAAAGTATGGGAC
CTGAAGAAGATCCAATCAGTATCTTTCTCGTCATCTCTGGCAGTCGTGGC
CAAAGAATGCTTTTCAGATATCCATTCCAAGAAACCAGTGTTTCTTACGG
TAAAAGTATCAATTCTCCACAACGCATCAAATCCATCAGTGAAGATATCT
TTCAAAATCCATACCGATTGAATACTCAATCTTCAAGCAATCAAGAATCA
ACTAAGAATCAATCTGTTTTGAATGGAGGTTCGATATACGGTTTCAGTGA
TAGTGAACTTGCTTCTTTGATGGCACCAAAATCCATCTTGTGTGATCAGA
AGTTTGAATTGAAAATCGGTCACGTGAAATTGATTGGTTATCCTGTGCAA
GTGCGAACAGATGGCACATGCTCTGGCTTTCAGGACCTGTTGGAGTTGGA
AAGTCTGGATAATGACGTCATGATTAATATGGTAAATGTTGTCATGGCAA
TTCATGCCAATGTTGACGCCACTGTCGCGTCGCATTATCAAAATATTTGT
ATGATGCTGGGAAAAGCTTTACGACATGAAGAAAAGAGGTATTTCAGTTT
TTTGTAAACTCTGTAAGATTCATTTTCTGTATTTTCCAAGGAAATTCATT
TCTGTATTTTCAAAGGAAAATTTAATTGATTCGGCATCTTCTGAGTAATT
TACAAACCAGAATTTGCTGAACCTATTATTTGTGTAAGAAAAATTTACTT
CATTTTTATTGTTCAAAAATTGATTTTATATAGATTTACAATCTTCTGGA
CTTTGAAAGGAAAATTGATACTTTTTTAGATACAATGTTGGCCATAATAT
TTGGCACGAAGGGAATTAAAAAAGGGGCAAGTAGTTTTTAAGTGCCTTAA
CTTAGGGTTTAAAGTAAAGTTTTAACTCGATTAACTTAAATTTATTAGAG
TTTTAACATGAGACTTAAGACTTCCAAAAGCGTTTAAATGTCCGACTAGG
CTGAGAATATAGCTTGGAAGCCATTATACCCCTGCCAAATCGAAATATTT
AATTAGATAAAAGTAGAAAGCCTTAACATGTCATTCTCGTCCGAACTTTA
GATTCAGAAAAACGCTAAAATGGCCAAAAATGCTAGCCATAATTGAGTCC
ATCATCTTTTTTTAAATCATAGGGTACGATATCTGTCCAACCAGCACGAG
ATCATGGTCTTAGAAATCGATCGTATCGAAGACCTCCCCGAATCTGAACA
AAACGTTCACGAAAGAACGCTGGCAAAAAGTCAACTGGCCAAAGACATCG
TATCTGCGTTCCAATCGATGTGTGATTACGGCATTGTCAACATCAACGTT
AACGGATGGCTTGGTCTTAATTACTGTTTTCCTCACAAAATCCATAAAGC
GGAGATTCGGGAGACGATGATTGATACATCAAAATTCAATACTTACATCC
GCAGAATCAAACCCTACCACACTCTCCTTCTCACTGACGATGACGACAAT
GAACATGAAGAAAATGAGATTGCAAACCTCATCAAAATCCTTCCTCCCGA
TGCTTCTCCCGTGCTACACCGACTAATCACTTTATCCCGACCTGTCAAGA
ACTTCCAAACACTTTGCCAAGATGCTGACATCTCCTTACCACAAATCTTT
CAAATAGTTGCTCATTTGATTTATTGGGGTAAATGTATTGTTATCTATCC
TTTAGCTGAAAGCAATATTTATGTTCTTGCTGAGAGTGTTCCCACTGAAA
TTGATTCTAAATGTTCTGAGGAATTCACGAAGAAATTCCCTGAACAATCA
CTTCATAACGTGTTTCAAAAGTTCTCCTTTCCGTTAACCCTGGGTGACTA
TCGAAATCCATTATGTAATGATAAGCATGTTGAGCATGCGCAAATAGTCA
CGTGGTTACTGAAAAAGAGGCTGATCAAACAGCTTCATACGTTTGTTTAC
ATGGTTCCCATGGCAGCCATTGATTTAGAACGTGACAACGAGATCGACCC
GGTGGAGCAGAGAAATACATTTTTCCAACGGTTTCAGTTAAAAGGGACTG
GAGACAAAACTATATTTGATGCTTTCCCCGTCGCCATGCAGTTAAGTATA
ATTTCTGTGTCGTACCTCGTTGAACGTGATGATATGCTGTTCTTTTTGCG
GATGACAAAATATTTTGATGGTGAACATCACCTAGAGAACATCATGTATT
TCGAGAATGTTTCTCGCTCCAAACTGATTATTTGCATTGATAAGTTTCGA
AGTATTTTGATCACTGTGCAGCACCAAGATGCAGCCACAGTGCAATTGGC
TTAAATTTATTACCTGTAGGGGGCCCCCATGCTCTCCATTACTTTGATAA
TTGAATGCATTTTCTTGCTAGTTCTCTTCTTTTCAACGAGTATCTCGTTG
TCTTTCTTATAAAAACTACAATTTTGTTATTAGAGTCAATTTAAATTATC
ATAATCTATGTCTGGATTAAATATGGTATTTTTGATGCATTGTGTGACTG
CTACCATATGTAGTACAAACCATAGCCTTTTGAAGAATAATGACTACTAG
AGGAATATTTTTGTTTATATTTTTATTAACTTTTCGAAAATTTTATATAG
ATAATACTTTACTACATCAAGATAATGATAACTTTATTATAAGATATTTT
CATTCGATTTTATTTACACAGAATCTGGACGTAATTTGAATGTTTTGGTC
CATTAAGGCCTTTGTTAAAAGTCAAGAATTCTATTTTGTTCTATATCAAG
TTTATTTTGACTATTCTGTGAGCCCATTAGAGAACCTAACTGCTTCGAAA
GACACTATCTGCCCTTCTGCTCATTGGCAATGTTATTGATTATCCATGAG
GTAACAGACCAAGATTTCCTCTTTTGGCTTCATCCTTGACGTAAATGTTT
TCATTGAATGGTGAATAGTTGGATTGGATGAAGGTTTAGAGAACCGCTGT
TTGTGGGCCCTGATGTTCCTGTTCATGATGCGGCNGTTTAGAGAACCGCT
GTCTGTGGTCCCTGATGTTCATGTTCGTGATGCGGCTGTTCGCCTTGTTT
CGGTACCGTGAACATAGCCTCGTCATGAGGTCGAAACATGTTTTGAAGAT
TGCCGTTTCTCGCTTCTTGTTGATCTGGCTGTTGTTGGAGACCGCGCCCG
CTTCCTGTCAACGTCTTGTCGGAGGTGAACACCAACTTGGGTCCCGAATC
TTGCTTGCTAAGTTGAATTTTGTTTCCGTTAGCATAAGGGTCCGCCATTA
TTGGGTTTCCATAGTTACCAGGATCAACAATAAGGCTTGAGAAATTATCA
CGAGAGATTTTTGGGACGACATTTGCGTGTCGCATCGCTGGTGTGTGGGC
GTCGCTTAACAATGTCAGACGTTGCACCTTGGGTGGCTGGCGGCCCCACA
TTAACTTCGGATCTACTTTTCGTTCCTGGATGTAGAAATTAAAGAAATCT
CGAAAAGCTTTCCAGACGTGTTCGCACGTTTTATTGTTATTAAAATGAAA
TTTATGTTTGCTTTTCTCCCCTTCTCTCATGACGCGGAACCAGAAAATGG
AATTAATGTAGCCAACATTCCAAATTTCCATCCAATTAAAAATATCCAAC
TTCACTGAATTTTGATATAATCCGATCCCAATCGGACCCAGGGTGAGGGT
CAACCTCTTGAGGCCCGGTTGAGCATCAGAGCGCACGTGGTAGATCTCTT
GACTGTAGTAAGTGACTGTGAGTGCTTTCTCCATCAGTTTCATTTCGCAC
GTGGGTGGATCCATCCCTCCCATGTGTGTGTAAAT Coding sequence (CDS) from alignment at sc0000348:80542..84376- >TCONS_00020059 ID=TCONS_00020059|Name=TCONS_00020059|organism=Clytia hemisphaerica|type=CDS|length=3354bp|location=Sequence derived from alignment at sc0000348:80542..84376- (Clytia hemisphaerica)
GGTACGATATCTGTCCAACCAGCACGAGATCATGGTCTTAGAAATCGATC
GTATCGAAGACCTCCCCGAATCTGAACAAAACGTTCACGAAAGAACGCTG
GCAAAAAGTCAACTGGCCAAAGACATCGTATCTGCGTTCCAATCGATGTG
TGATTACGGCATTGTCAACATCAACGTTAACGGATGGCTTGGTCTTAATT
ACTGTTTTCCTCACAAAATCCATAAAGCGGAGATTCGGGAGACGATGATT
GATACATCAAAATTCAATACTTACATCCGCAGAATCAAACCCTACCACAC
TCTCCTTCTCACTGACGATGACGACAATGAACATGAAGAAAATGAGATTG
CAAACCTCATCAAAATCCTTCCTCCCGATGCTTCTCCCGTGCTACACCGA
CTAATCACTTTATCCCGACCTGTCAAGAACTTCCAAACACTTTGCCAAGA
TGCTGACATCTCCTTACCACAAATCTTTCAAATAGTTGCTCATTTGATTT
ATTGGGGTAAATGTATTGTTATCTATCCTTTAGCTGAAAGCAATATTTAT
GTTCTTGCTGAGAGTGTTCCCACTGAAATTGATTCTAAATGTTCTGAGGA
ATTCACGAAGAAATTCCCTGAACAATCACTTCATAACGTGTTTCAAAAGT
TCTCCTTTCCGTTAACCCTGGGTGACTATCGAAATCCATTATGTAATGAT
AAGCATGTTGAGCATGCGCAAATAGTCACGTGGTTACTGAAAAAGAGGCT
GATCAAACAGCTTCATACGTTTGTTTACATGGTTCCCATGGCAGCCATTG
ATTTAGAACGTGACAACGAGATCGACCCGGTGGAGCAGAGAAATACATTT
TTCCAACGGTTTCAGTTAAAAGGGACTGGAGACAAAACTATATTTGATGC
TTTCCCCGTCGCCATGCAGTTAAGTATAATTTCTGTGTCGTACCTCGTTG
AACGTGATGATATGCTGTTCTTTTTGCGGATGACAAAATATTTTGATGGT
GAACATCACCTAGAGAACATCATGTATTTCGAGAATGTTTCTCGCTCCAA
ACTGATTATTTGCATTGATAAGTTTCGAAGTATTTTGATCACTGTGCAGC
ACCAAGATGCAGCCACAGTGCAATTGGCTTAAATGGGACCTGAAGAAGAT
CCAATCAGTATCTTTCTCGTCATCTCTGGCAGTCGTGGCCAAAGAATGCT
TTTCAGATATCCATTCCAAGAAACCAGTGTTTCTTACGGTAAAAGTATCA
ATTCTCCACAACGCATCAAATCCATCAGTGAAGATATCTTTCAAAATCCA
TACCGATTGAATACTCAATCTTCAAGCAATCAAGAATCAACTAAGAATCA
ATCTGTTTTGAATGGAGGTTCGATATACGGTTTCAGTGATAGTGAACTTG
CTTCTTTGATGGCACCAAAATCCATCTTGTGTGATCAGAAGTTTGAATTG
AAAATCGGTCACGTGAAATTGATTGGTTATCCTGTGCAAGTGCGAACAGA
TGGCACATGCTCTGGCTTTCAGGACCTGTTGGAGTTGGAAAGTCTGGATA
ATGACGTCATGATTAATATGGTAAATGTTGTCATGGCAATTCATGCCAAT
GTTGACGCCACTGTCGCGTCGCATTATCAAAATATTTGTATGATGCTGGG
AAAAGCTTTACGACATGAAGAAAAGAGGGTACGATATCTGTCCAACCAGC
ACGAGATCATGGTCTTAGAAATCGATCGTATCGAAGACCTCCCCGAATCT
GAACAAAACGTTCACGAAAGAACGCTGGCAAAAAGTCAACTGGCCAAAGA
CATCGTATCTGCGTTCCAATCGATGTGTGATTACGGCATTGTCAACATCA
ACGTTAACGGATGGCTTGGTCTTAATTACTGTTTTCCTCACAAAATCCAT
AAAGCGGAGATTCGGGAGACGATGATTGATACATCAAAATTCAATACTTA
CATCCGCAGAATCAAACCCTACCACACTCTCCTTCTCACTGACGATGACG
ACAATGAACATGAAGAAAATGAGATTGCAAACCTCATCAAAATCCTTCCT
CCCGATGCTTCTCCCGTGCTACACCGACTAATCACTTTATCCCGACCTGT
CAAGAACTTCCAAACACTTTGCCAAGATGCTGACATCTCCTTACCACAAA
TCTTTCAAATAGTTGCTCATTTGATTTATTGGGGTAAATGTATTGTTATC
TATCCTTTAGCTGAAAGCAATATTTATGTTCTTGCTGAGAGTGTTCCCAC
TGAAATTGATTCTAAATGTTCTGAGGAATTCACGAAGAAATTCCCTGAAC
AATCACTTCATAACGTGTTTCAAAAGTTCTCCTTTCCGTTAACCCTGGGT
GACTATCGAAATCCATTATGTAATGATAAGCATGTTGAGCATGCGCAAAT
AGTCACGTGGTTACTGAAAAAGAGGCTGATCAAACAGCTTCATACGTTTG
TTTACATGGTTCCCATGGCAGCCATTGATTTAGAACGTGACAACGAGATC
GACCCGGTGGAGCAGAGAAATACATTTTTCCAACGGTTTCAGTTAAAAGG
GACTGGAGACAAAACTATATTTGATGCTTTCCCCGTCGCCATGCAGTTAA
GTATAATTTCTGTGTCGTACCTCGTTGAACGTGATGATATGCTGTTCTTT
TTGCGGATGACAAAATATTTTGATGGTGAACATCACCTAGAGAACATCAT
GTATTTCGAGAATGTTTCTCGCTCCAAACTGATTATTTGCATTGATAAGT
TTCGAAGTATTTTGATCACTGTGCAGCACCAAGATGCAGCCACAGTGCAA
TTGGCTTAAATGGGACCTGAAGAAGATCCAATCAGTATCTTTCTCGTCAT
CTCTGGCAGTCGTGGCCAAAGAATGCTTTTCAGATATCCATTCCAAGAAA
CCAGTGTTTCTTACGGTAAAAGTATCAATTCTCCACAACGCATCAAATCC
ATCAGTGAAGATATCTTTCAAAATCCATACCGATTGAATACTCAATCTTC
AAGCAATCAAGAATCAACTAAGAATCAATCTGTTTTGAATGGAGGTTCGA
TATACGGTTTCAGTGATAGTGAACTTGCTTCTTTGATGGCACCAAAATCC
ATCTTGTGTGATCAGAAGTTTGAATTGAAAATCGGTCACGTGAAATTGAT
TGGTTATCCTGTGCAAGTGCGAACAGATGGCACATGCTCTGGCTTTCAGG
ACCTGTTGGAGTTGGAAAGTCTGGATAATGACGTCATGATTAATATGGTA
AATGTTGTCATGGCAATTCATGCCAATGTTGACGCCACTGTCGCGTCGCA
TTATCAAAATATTTGTATGATGCTGGGAAAAGCTTTACGACATGAAGAAA
AGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020059-exon-sc0000348-1575043694:83739..84376 | TCONS_00020059-exon-sc0000348-1575043694:83739..84376 | Clytia hemisphaerica | exon |
| TCONS_00020059-exon-sc0000348-1575043694:80542..83154 | TCONS_00020059-exon-sc0000348-1575043694:80542..83154 | Clytia hemisphaerica | exon |
| TCONS_00020059-exon-sc0000348-1510915933:83739..84376 | TCONS_00020059-exon-sc0000348-1510915933:83739..84376 | Clytia hemisphaerica | exon |
| TCONS_00020059-exon-sc0000348-1510915933:80542..83154 | TCONS_00020059-exon-sc0000348-1510915933:80542..83154 | Clytia hemisphaerica | exon |
| TCONS_00020059-exon-sc0000348-1491911889:83739..84376 | TCONS_00020059-exon-sc0000348-1491911889:83739..84376 | Clytia hemisphaerica | exon |
| TCONS_00020059-exon-sc0000348-1491911889:80542..83154 | TCONS_00020059-exon-sc0000348-1491911889:80542..83154 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000348 | supercontig | sc0000348:80542..84376 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR005365 | NPR3 |
Blast
BLAST of TCONS_00020059 vs. Swiss-Prot (Human)
Match: NPRL3 (GATOR complex protein NPRL3 OS=Homo sapiens GN=NPRL3 PE=1 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 7.075e-91 Identity = 193/587 (32.88%), Postives = 310/587 (52.81%), Query Frame = 1
Query: 112 PISIFLVISGSRGQRMLFRYPFQETSVSYGKSINSPQRIKSISEDIFQNPYRLNTQSSSNQESTKNQSVLNGGSIYGFSDSELASLMAPKSILCDQKFELKIGHVKLIGYPVQVRTD-GTCSGFQDLLELESLXXXXXXXXXXXXXAIHANVDATVASHYQNICMMLGKALRHEEKRVRYLSNQHEIMVL---EIDRIEDLPESEQNVHERTLAKSQLAKDIVSAFQSMCDYGIVNINVNGWLGLNYCFPHKIHKAEIRETMIDTSKFNTYIRRIKPYXXXXXXXXXXXXXXXXXIANLIKILPPDASPVLHRLITLSRPVKNFQTLCQDADISLPQIFQIVAHLIYWGKCIVIYPLAESNIYVLAESVPTEIDSKCSEEFTKKFPEQSLHNVFQKFSFPLTLGDYRNPLCND-KHVEHAQIVTWLLKKRLIKQLHTFVYMVPMAAIDLERDNEID----------------------PVEQRNTFF-------QRFQLKGTGD--------KTIFDAFPVAMQLSIISVSYLVERDDMLFFLRMTKYFDGEHHLENIMYFENVSRSKLIICIDKFRSILITVQHQD 1746
PIS+ LV SGSRG ++LFRYPFQ + + P+ + S NT ++++ ++ FSD LA+++A KS +C QKFELKI +V+ +G+P ++ G S + E+ + + NVV A+ AN D +V + N+ + L+HEE+R +YL+ + ++++ E+ + D E Q+ L K +LA+D+ A+ S+C G+V +++N WL +++C PHKIH A ++I ++ I+PYH LLL D+ +L+ LP D SP L R+I + VKN Q L QDAD++L Q+FQ+ AHL+YWGK I+IYPL E+N+Y+L+ + + S +E+F+ +FP L +V KFS P++L ++RNPL + + Q+V W+L++RL+ QLHT+V ++ + + R E D P + +L +GD + + + + +I+SV +D+ F R+ YF G HHLE IMY EN RS+L++ DKFRS+L+ H+D
Sbjct: 7 PISVILVSSGSRGNKLLFRYPFQRSQEHPASQTSKPRSRYAAS----------NTGDHADEQDGDSR----------FSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQISKTDPSPKREA----PTMILFNVVFALRANADPSVINCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAA--SSLIPPEAIERSLKAIRPYHALLLLSDEK---------SLLGELPIDCSPALVRVIKTTSAVKNLQQLAQDADLALLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSHDLPSVLAKFSLPVSLSEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLMLFDKFRSVLVVTTHED 558
The following BLAST results are available for this feature:
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