TCONS_00020177 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020177
Unique NameTCONS_00020177
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1435

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020177 ID=TCONS_00020177|Name=TCONS_00020177|organism=Clytia hemisphaerica|type=transcript|length=1435bp
ctgaCAATGGatttaattaattaaaactttcttCGTTTCTTCTACGGCGA
TACCAGATATGAAAACCATGATCAGGTTTTATTATTGACAAACTCGAACC
CCCCAGTCTATTTGTTCgcttttttattatatattattcTGATAACTCAC
GATATTGTACCGACTTCTATAGCcagaaaatttgagaaactcAAAAAAAT
CCATGTCGTCATCTGGTCATCATTATTCGCCTCATCTGCCCTCATTGCCC
TCATACTATAGATCAGCTGCCGTGTGGTTTTAGCTCCAGTTCAGTTGACA
AGGATTTTTCGCGCCATTTTTTGCGAAAAATCCGGAATAAATCATGTCCG
GGAACTTTTTCCGGAAAAAAATACGGATGTCAcatgatttatttttattt
tattctcgagaaaacgaaagtggatatcattgcaagcaaagcaaaaagtg
caaaaaagtcACAACTGACAAACAAACAAGAAATATCATCAAGAAAACTT
TAGATGTAATCAATATTCAATTATGAACTCAACTGAGCTGTGATCTTACC
AGATCTTACAAATAATGCACCAAGCTCATGGCAACACCGTCCACAACAAA
TATTGTACAGCTACAGGCTTTACAACTTTATCACATAATCAAAGAATTTG
GATCCACAGAATACATCAATCAATTGAATGATCTTCTCAGTGATAGGATC
AACTATGCAACTGTTTCTGATGTTCAAGATATTGGGAAACATATTAAACT
AACAGAAGTGTTTGAGGCTCTTTGGGTAGCTGAAAACaaagaatggaaaa
aattTCTCTCAAATTGGAATACACCTGTTACTGGGGCAAGAGGATCTATT
TCTTCACTGACGTCATCAATAGGCTCACACAATTCATCATTGCTCCAATC
AATGAACCATGCTACACCAAATGCATGGATTGGTGAACGTCTTATGTGGC
ACAGTAATCATAGGTCAAATCTACATACTTTCTTCAAAGGGTTTGAGTAA
GTATTTACTCAATTCTTAAATTTATAAACAGTCCATTTTCCTGCATACAA
TTACTTTCCCATTACATTAATGTGTGGTGATTTTTAACCATATATCTATT
CTACCTTTTGCTTCAAATGGTTCCACACAAAACTTTCAGTTCTATTCCTA
ATTTTATTTTCCTAAATTGAGATCTTCAAGTTTGAAACTATtgactttaa
aaagaaaaaaatatcaaaataagaacTACAGTGTTCAAGGCATTCTTAGG
CATTTGGTGATAACCGGGTAAGAAGGTTTCCTAAAGGCTATAGAATATAT
ATATTGTAGAAGTTTTTTATCTTCTCCTCATAGAGTGCTCGATAAGTTAA
TAGAGCGTTGCTATAATAAAGAATTGacacaatatctttgtttcaacTCT
TTATTGCCTTAATGCCCTTAATTTTCGCGCGCCTT
Run BLAST on NCBI

transcript from alignment at sc0000350:406957..423298+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020177 ID=TCONS_00020177|Name=TCONS_00020177|organism=Clytia hemisphaerica|type=transcript|length=16342bp|location=Sequence derived from alignment at sc0000350:406957..423298+ (Clytia hemisphaerica)
ctgaCAATGGatttaattaattaaaactttcttCGTTTCTTCTACGGCGA
TACCAGATATGAAAACCATGATCAGGTTTTATTATTGACAAACTCGAACC
CCCCAGTCTATTTGTTCgcttttttattatatattattcTGATAACTCAC
GATATTGTACCGACTTCTATAGCcagaaaatttgagaaactcAAAAAAAT
CCATGTCGTCATCTGGTCATCATTATTCGCCTCATCTGCCCTCATTGCCC
TCATACTATAGATCAGCTGCCGTGTGGTTTTAGCTCCAGTTCAGTTGACA
AGGATTTTTCGCGCCATTTTTTGCGAAAAATCCGGAATAAATCATGTCCG
GGAACTTTTTCCGGAAAAAAATACGGATGTCAcatgatttatttttattt
tattctcgagaaaacgaaagtggatatcattgcaagcaaagcaaaaagtg
caaaaaagtcACAACTGACAAACAAACAAGAAATATCATCAAGAAAACTT
TAGATGTAATCAATATTCAATTATGAACTCAACTGAGGTATGATGATTTA
AATTGATACTTACATTCGTAAGTAGAGTGCTCTTACGAAGACCTTGTCGG
TCATCAGGTTTTTTCTTGTTTCTCACAACACAGACAGTTTATTCCGTTta
tcagtcgggtgtttaagataaaaactgcaattattgctcttttcggaaat
tattgccgaaaacggcaatttttttaacgatgaaatgctgaatcagcaaa
atNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNataccacgtgttcaataataaaatca
acttttatttgcaaaaacggcaataattgccgaaaacggcaattttcatt
tatttacttttttatttttctgctgattcatcatttcatcgttaaaaaaa
ttgccgttttcggcaataatttccgaaaagagcaataattgcagttttta
tcttaaacacccgactgtttATTTCTAGCTAAAGCCTCACCAGTCTCTAA
ACtaatttttcttatttctcaACGACCCTGCCAACGCACTGGACAGTCCA
GTGTGTTTGTCCGGTGCCAAaaagtaccgtgagattgggtaacttgcatc
agtggaggctaacatgcatagccctcaaatgatatgatgaaagacctggc
tggtcattagcgaggttaagcaagaagctatctattacgtacggaatcta
ttacgtaAGTTTTTCGCGGGCTAGCGCCCAAATCTCAAGGCTAGCTCTGT
CCCGTGAAATTTGACATGACCTGTACGTCGTATTTTGGGGAGTGGATCTA
TTGCGTGAAATTCTTCAATCTCACGTAATAGATATCGATTATAGGATATA
AGCATGATCCACGGGAAATTTACGTTACGGAGATTGGGCTGAATCGTTTA
GGATCAAAAATCAcccgaaaaaaatgtaaacagaaaagaaactttggtaa
tttttttttgattgctGACAAGTTTGAACTGTatgagaaaactaaaaaca
gAAGAAATCTTTTGAATCTCATCTATGGAAACTATGATGCATACAAACAA
AGTGAAAGGATTTATTGCACAAAAGAAGGTCAAGATGTAAGTGTAATAAA
ATAATCTTTGctaacttttttatcaaaccaaaacaaacagaagtgtcttg
gttcttttgtttttcttctcttttttctttttctttttgctgaAAGTCCG
CAAATACATCCAAAGTAACCATTACAATGAACAGCATgtaaccatatttc
tttttcatgtttttcagtgtttctgTGGTGCCACcatcatagctgtcaac
tctcccgcattgaGCGGGAGACTCCTGCATGTCAACGATTTCTCCCGCGT
GAAGAAAATTCtgccaaatctcccgcatttttgggattttctcccgcatc
tcccgcatttccaaaaatttcccgattttggaaaaaccaaatggcgaaat
ttctggattttgaaagatcggaacgaaaaattccccaatttcccgaaaaa
aatttccaataaaatcggattttacgaaaaaatttccccgattttccgat
tttgaaaaatcggattatcggggaaaatttttccgacttggagctctccc
ccatttttgtgaggcgaagttgacagctatgcacCATATCAGGTGCGAAG
AAGCCAAAGTTATAATAATATGTCAAAGCAAAGCAACAAACACGAGAAAA
AGACTGCTCTGCCAAGcccagtcaggacctctttggtcttttttaacatt
agttcggatagaataaaaacatacctgatcaacacaaccaaaccttctgt
cttgcgtttactctttttccttcccaacaactttcgtttttgcttatgta
ggttttaaaatccacaagtaatgaacctcttatagctttatctgaataaa
tctggttgaaaccTTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTGGTtgaaacc
ttctgtcaggtttcattccgtacgttttttatccacgtggtgaaccggtt
tccccgatttcccgataattaaaaattggaactttcttgtgggcgcgatt
gggcgtaccgccatcgcaaaatatttttcgtgaaaatttaccgtattcta
acgctaatataatctagataggaaacaaatattaaattNgatcttttttt
gttcgtatttctaaatttcaagataaaaggaactatctacgaattatttt
ctttaacgggcgttgaatcaacattgacatatttaatgatgtgataatca
atgccgtgcatattttgtcagccccgtgcatattttgtcaacatcctttt
cattggataaataccactaaaatatacaagataagtaaacataaatttat
cgcccgcgagcacggattagctaagcgcacctctcttattcattatctaa
gaattgaagcgggcaaagattaccgcgcggctgatagcggacgaaggttt
tttgaagatattttcagttataatccaaggtagaacaaactaaacataga
aaggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNggtattttttttgaattctatgtttagat
ttttctacccagccccgtttctatgtacgcgcgccctgttgctaagacct
ttgcttgaaatcgaaagcaaaccaagattatttagcgcacactgccgttt
gcgtaatatcgataaagtgaaatgaggtcctgactggcCAAGCCCAAAGA
AATTTACCCCTCCACCTGCCAAAGCATAACAgaagaaatctttatttatt
tttccaatttcaaatgCTACAACTAAGCAACGAGATTCAATTTCTGCTCT
TCATCATCAACTATATATTGTACGTACAAATCAGCCTGCTAAAAACTTGA
TGTCACACACAACCGATGGACTTCAAATCGTTCCCCAAAGTTATATAAAG
CTCTATCTTCTGGACAATTGCTACTGCTTTGAGTTCTCAATCCTTCGCTG
AAAAACTTTAACTGACCGGTCATTTTTCAACTTCTTCTACATTAATATAA
CGTTCAAGAAAGTTTGGTTTGATTCTAAGAGACATCTTCCTTCCTAAAAA
GGTGATATCGGTACCTTGTGGAATGCAAAGAAGCAGAAGAAGTAACACCT
GCCAGATATGAAAAAGACTGGGTTTGCACACTTTTTTTTAAGAGTGTTTT
TATTGGTAATGGTGAAGCATTCATAGAAATTCAGCTATATAAGGATGACA
TAGATGTACACTAGGCTCTtacagattatttttttgtttataaataaaac
agTAATTTTTGATTGGTACCTATGTAAACTAGGAATTAAGTTACAGTATG
AAATTATATATTTCTTTGCAATGTTAAGTCATGATACTATATTATCATTG
AAATGATAAGTCATAGACATATTTTTGTTTACTGAAATGTTGAATAATAG
TAAAAGTAATAGAATACTCTGACTATATGCTTGTctagatttaatttttg
tgaaaaacatTTGTCTTGGGAAAAAACTAAGTAGATTAAAATTGAAAGTA
AGGGGATTTTAAAGACCAAGCCACTAACaagaaaactgaaaaagaaaaaa
agaagaagaaaattttagaagTTGGGGCCGAAAGTGAGATacggaaaaat
aaacattacgtcatacgtAATAGATCGCCTTTTTTGCTTAACCTCTTTTT
TCTCTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTAG
GAATCAGGCTAAAATGCCTCGGATCCAGTctaaaaactcacgtaatagat
tccgtacgtaatagatagcttcttgcttaacctcgctattgaATACAACT
ACACAGCTCCCGGATTTGCTTGTCCCGTGTTTGTAAAGTCTGGTGCGTTG
GCGGCAGGGTCATATTTCTTATACAAACGCCTAAAATTGCAAACAACTCT
TGTCACTCGTTGCGGCTCGTTTTATCGCATCCAATCAGTATTTTCTCTca
caatcaaaacaacaatatGTCCCATTTACCAtagaatcgtctaatatcga
cacccctcctttaaaatccaaaaaaaccttGAGTGAAATTTTTGGTATCA
TTCctatcaaacaagttcatccatcaaactagaagttcagtaaacttTGC
ACATTgcaattctttcaaaaaaaagccaaattataagcaattTTACACAA
CATGTGAAAcatgaaacgcatgcaaactttctCGTGCCCATCAATAAAAt
cttacaactttattacgcttcaagtcatgtgataaaaataatttgcgcgc
tTAGTCGGCCTGGTTTCCCTTTCCTTATTTATCACAAACACACACTCTAG
GTGCTAAGAGGCCGCACACCGTGATGGGCAGTATGGCAGTCACATTAAAT
TTAAAAGGAAAttgggttctttttattatttttggttcacggtaaaaaaa
ggtctactaaaaaattcctcgcatgcaaaatgttgttttgatttagaTAT
CTTTGTTGAAAGCATGCttattattagttttttagtgatgaCTACAtcat
taaagttttcttttcaaacataagtaataacacttcacatATCTCATATA
TCAACAATCTGTGATGTGATAAAGTTTAGTGATTGATTGGTAACTGGtaa
tgtatttgtttatgtttgattttttatttcgaagaccagcctacagttAT
GTCGAAATAACAATACACATGTCAATATTAGACGATTCTACGGTAATTGC
TCTTAGataacaaaatatattttttgccTTGGGAGTATGAAAAGTCTTCG
GCAAAGGCGAGCATGTTTTTACTGAGTTTGTTTGCAACTTACAGTATAGC
CCTAACTCCTAGTATAAAATCTAAGggaacgcatatttggacttcgTATC
TAATGCTGCACAAAGCAATTAAGCGAAAGTCCCGCCAAAGTAGGGAAAAA
ATTATAGAAGATCCTTCAAATTCAGTATATGTAAATAGAGCAGCACTACT
GGGTCAGAAACCGTTCGATTCGGACACACGAACGCTTTTCCATTCGTGAC
GAACGGGTTAACCGTTCGCGACGAATGCTTTTGCATCCTTTGCGAACGCC
CTACAAAAAAGTTTGATTGCGACCGTTCGCGACGAACGCGTTTTCTTTTT
AacccgtttgtgacgaacggcTTAAAAAGAAAAGCGTTCGTGAAGAACGC
ttacaaaaatttgagaaatgaaACCGTACGCGAAGAGTGCTTTACCGTTT
GCCgcgaatgcttttaaagaattattcaaatcaaaaaaccgttcgtcaca
aacgcAACGAATGGATTTTAATGGGAAagatttctaagaaaatttacTTA
GCATGTACTTGGATTTATGGAACGGGGAATGAATTTACTTATTGAGGTAC
TTCTTtcattaatgttttttttcaaaaggataaCTTTATAGAAGAGGTCA
TAACTACTTAAATATTCTGGTTTTGACTTTCTAGACGGAAGGAAGATTTG
ATTTGGACTTGAAAAGAAAAGTTACAAATGATTTTTACCTTTAAAGTTTC
CTTATACCTTATCGACCCCGAACagttttttaaagcaattttgctgtaaa
tttttaatgacttttatttcaattttgacctcttctataaagaaaaactt
tgaagatacccctgtctcaccacgAACGATCTTTTAGAGAACACCTGTAT
CGGAATAACCtaataaaaaattaagtttggtATATATANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNACAATGCAGGGCTGCAATCGGac
tttgataaaagtgatatttgaaacactcttaaaagtttcgaagaaagtga
tttgataaaagtgatcttagaaacactcttaaaagtttcgaaaaaaccga
tttgataaaagtgatcttagaaaacacccttaaaagttacgaagaaagcg
atttgataaaagtgatctttgaaacactctgaaaagtttcgaaaacagcg
atttgataaaagtgatcttaaaAACACTctgaaaagttacgaagaaagcg
atttgataaaagtgatcttagaaacactcttaaaagttacaaatgaagcg
atttgataaaagtgatctttgaaactctcttaaaagtttcgaaaaaagcg
atttgataaaagtgatcttagaaacactctgaaaagttacgaagaaagtg
atgtgataaaagtgatcttagaaacactcttaaaagtttcgaaaaaaccg
atttgataaaagtgatatttgaaacactcttaaatgtttcgaaaaaagcg
atttgataaaagacaagtgatcttagaaaacacccttaaaagttacgaag
aaagcgatttgataaaagggaTCTTTgtaacactcttaaaagtttcaaaa
aaagcgatttgatacaagtgatatttgaaacactcttaaaagttacgatg
aaagtgatttgataaaagtgatctttgaaacactcttaaaagtttcgaaa
acagcgatttgataaaagtgatcttagaaacaacccttaaaagttacgaa
gaaagcgatttgataaaagggaTCTTTGTAACACTcctaaaagtttcaaa
aaaagcgatttgatacaagtgatatttgaaacactcttaaaagttacgat
gaaagtgatttgataaaagtgatctttgaaacactcttaaaagttacaaa
tgaagcgatttgataaacgtgatctttgaaacactcttaaaagtttcgaa
aaaagcgatttgataaaagtgatcttagaaactctcttaaaagtttcgaa
aaaagtgatttgataaaagtgatcttagaaaacactctgaaaagttacga
agaaagcgatttgataaaagtgatcttagaaactcTCTTAAAAGTTGCAA
AGAAAGCGATACGAAAAAAGCGATTCAATAAAAGCGATCTTAGAAAtaca
attattttttcataagcatacaaaaatccaaaagctggctcggaaatgct
tagatcgagagatttacaaagctgaaaaatgctttgaaggatgcttatat
cctaagcaaAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtttcgaatgttttaatttgt
acatattcaaaaacattcgaacacgaaaatctttagaaaaacaatgcaat
gactaTTACTAATGCTTTTCGAGCGACTTTCTATTCCAAAGCGTTCGTTA
TAAACGTAGAATTCGACTCGTTTATGCAACAAGCGTTTTAAGAAGGTAGC
GTTCGTCACTAGCGTTTAGTACGAAAACTTGCACGTTTTCTACTTCCGTC
CTTCTTTGATTTTAAGAAAAGGTTATATACATTGTAAAaaggcatactgg
agaagtgggacgtgggacggtgggacgctcaggtgggacgctcaagtggg
acgctcaggtggggcgctaaggtgggacggtagtgggacgctaaggtggg
acggtagtgggaccctaaggtgggacgctaaagtgggacggtagtgggac
gctaaggtgggacggtagtgggacgctaaggtgggacggtagNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTCTTCACACTAAGGTTTTTACAAAAGTGGTCCAGCAGCAGCCTG
ACTATATTTCGAAGAGTTTATATTTATTGAGAATAACAAAGTAATCATTC
GAATCAAAGGAATTTCCACAGAGGATTAGCTCTTTTTTCTTATCTTGTAC
CTCGACAAGGGTTGTTCACCGACATTCCAGACGATACGGCATCTCCTATA
ACAACTCATATCAGAAGGGATGTGTTCAGCCTACAACGTGGCTGAAATTA
TAACCCgatcaaataatgtaaaaagttaaagaaaagtcAAATGATTTTCA
TCAGTATCAAATAAACTTTCTTTACACCATGTCTCAGTCACCCCGTTTga
agtcaaaataaaatgaaatgattttcaTCCTTAGTAGATTAAACTTTcct
tacaaccctgtctcagtgactccGACTGAAGTCAAAGAATAatcaaatga
ttttaattattattaaactttccttatacacccctgtctcagtgactccG
ACTGAAGTCAAAGAATAatcaaatgattttaattattattaaactttcct
tatacacccctgtctcagtgactccgtttaaagtcaaagaaaaatcaaat
tatttttatcatcataaaactttaaaaacagTCAATGGAGACTGTTCATC
GAACGTTTCcagatcatctaaaaagaacgacaaataactataaaagcgac
aaaaagaacgacaaatttttaaagaacgacaaatttcatatttcgccgtc
cacaaccccgaccgaaagtgactgtaccaccctgTATTCCTCTTTGAttg
tcacgggaattaactgcaCGTGGTTGAAAAGAACagcaaattacgcatgc
gtattagTCTGTATTTGGGTGATCTGGAAACATTACATGAACTAACTCAA
TGTGAGGAAAACCtctgttaaaggttttgttttgattgaaaggtctgatg
atgcggatgtagtaaaaacaagtgcgacaagattagaaaaaggttttgaa
aaaaagaaaatgtattaaataaaaaaacattcctcaTTCCTCAgactttt
actgatactctttcgaatctttttatgtttataataaatagaacgttttc
tatcttatgtataatcaaaacattcgattgtaaatttgctcgaaatcaac
ttagttttttttgtttacaaaagcaaaagaatgcgaggtcacatctcgaa
acaaattttgatctttcacttGTTTACAGGATATCGTTGCGTAANGAGGT
AACATCTCGaaacaaattttgatctttcacttgtttacaggatatcgttg
cgtaaaaaagtagctttGATTTATCTGGCTCAGCATAAAGACTGTAtaaa
ataagctccttttattccTATAGAATACCTTTAAGGACGACAATTTTGAC
AATTGTTAAGAAGAGCCATTCAGCacacatttttaaaaacttacaANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNaaaaaaaatcataagcatTCGTCACGAACGG
GTGACCCGTTCGTCACGCATGGAAAAGCGTTCGTGTGTCCGAATCGAACG
GTTTCTGACCCAGTAGTGCAGTAACTAGTCACTCGGCGCTGCACCCGCTG
AGGAGCAGATATAAGCTaacgcatcataagccctttggatggtggggagg
gtaaaaagatctgatttgaaagcccaaagaacgaaaaattaccactttaa
atggtttaaaactaaaaatattgcaaatttaatgttttctgacgtcattt
gggccctaaatgacgtcatcaaaagagtaataaacttttcatttgacttt
taaGATATTTCTTCATTGATCAAATAcattctcttgatgatttctGATCC
AATGATCAATGATCGTTGTTTAAATCCTTATCAAACTCAAGTtatctttt
tttcaagttttaatgacgtcatcgaactGGAAATGACCAAAATTGCATAT
ACTCATTTTTGTAACTCCCAAATATACCCTCCCATCCTTTTCTCTATTAC
ATTTttgatccaatgaggggtcaaccatctcctaactcctttccaatctc
gagatatcacatttttcctgttttgatgacttCATCAAGTGAAAACGTct
gaaaattcagccaaatttcaaagtgcGCCTTGGGCCTCTCAGTGGAAAAT
tatctaatcaataaaaataatatataatagtACTATAATCTGTTAACAAA
TTCTTTCATCATAATTTCTCTAGCTGTGATCTTACCAGATCTTACAAATA
ATGCACCAAGCTCATGGCAACACCGTCCACAACAAATATTGTACAGCTAC
AGGCTTTACAACTTTATCACATAATCAAAGAATTTGGATCCACAGAATAC
ATCAATCAATTGAATGATCTTCTCAGTGATAGGATCAACTATGCAACTGT
TTCTGATGTTCAAGATATTGGGAAACATATTAAACTAACAGAAGTGTTTG
AGGCTCTTTGGGTAGCTGAAAACaaagaatggaaaaaattgtaagTCATC
TTTCTCTTTCTCACAGTCATTCTCAActtaaattaacctgtgttcgtccg
tctgtCCTTCCGTCCGCCTGTCCGTCcatccgtccgtccgtccgtccgtc
cgttcgtctgttaccagcttttctcgagattggctcattagttttttctg
atttttggcacaaagatgcaaaatggcaatgaccaaaatgtgacggggcc
cgattttcgaaacaaaaatttttctggcCAAAAAGGCCGGAAATATgacg
gaaaaactgttttttggcattttctaaagattttatcattagttttttct
gattttttgctcaaagatgcgtattgacaatgcccaaaacatggctgagt
ccaatttttgaaaagacaaTGCCAGAAATCGccttttttcctgttttttt
ctGGGTTtttattggactttttccttataattggttgttttttcattcaa
tgtttcaattttcaataaaattgatttttgaggccggaactatttaaaaa
tcgccggaacagcctattttccccggaaagacagtatttcttaaatttct
cgagctgtgttttaaatttgtttatgaaattttgcacactgatgcaaaat
gacaatacctaaaatgtgacggagccatttgaaaatatttttttccgact
ttttgcagaaagatatgacggtctcaggcaaaaatcatagggttaaaaat
taatgaaaattttagctcgagaaaacggagacctgttgtatatttttgga
aagctctcaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNagattagagatatattgcaagtataggtgatttc
tgtacctaactcgagatattaacccttaaaaaccgtgtttttcagccaga
aacagctattttgtccagtttttgcgctttttgaagctcaatatctcgag
ttgggtactgaaatcacctatacttgcaatatatctctaatcNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNtaatcttaattttttgagagctttccaaaaatatacaacagg
tctccgttttctcgagctaaaattttcattaatttttacccctatgattt
ttgcctgatttgtgctttgatcaaaacattcgagcgattttacaaaatgc
cctctactatatgtttttcacacaaaaacattattgataacaatgctcac
catcaagcatgattcaattgtcacatagtgcggaaaggggtctgatccct
ccccttcttaaatgatccccgcttcttggcatccccccaacctttaaaaa
tgcctatcccccaagggttttgggctaaattttctttggtaaaaagggaa
ggaaaacagtaaagaaaaattaagtctggcaaatataataccacctttta
gtgaaaataaagaacttcctttcatgcagaccaaatcttataacagtgct
ggaaaataatctacaatatatgtaagccccccccttcttaaacgatcccc
ccctccttgctatcccccccctttttaatggAAATTTCTGACCCcctctt
cttcacttttttggaaggtgtcatcccccccttaagaaagggggggggtc
cgaactatgtgtcaaaaaaactgatttttgcgaccagaactttctattta
ttttttccctacaacccttccctctccccccatcaacaatcaatgatgaa
tttattgcgttatgcattttcgctaaactctatattttctgactgatttt
ttttcatttttctcctcgcattgctatctaacctTCATCATCATGTAGGT
CCATTCTGCATCTAGgttgttgattttatttttagaacaTTTCATAGAGG
TGTCATCTTTAAAAATtgtcttttaaaaaagaaatagaaaattgaattaa
acCAGATTAATCATTTCTTATTTATTCTTCTATGTACCAGTCTCTCAAAT
TGGAATACACCTGTTACTGGGGCAAGAGGATCTATTTCTTCACTGACGTC
ATCAATAGGCTCACACAATTCATCATTGCTCCAATCAATGAACCATGCTA
CACCAAATGCATGGATTGGTGAACGTCTTATGTGGTAAGAATGTATTCCt
tcaaatataaatttttttctagtacctaaaaattttaatttgcatAAGAA
GAAACTcgacaaaaaaatctttcctaaAGATCCCTAGAAAGTGTAAGTTT
CGAAATGTTTTTAGGAAATATATACATAAActcaaattttgaataattta
aatTTGAGAAATTGAATATTACTTGAGATATTTTCACTTGTTTCCACTGT
ACTGTATTGCATTGTTTGACTCCTCCTTTGgatcatttttatttcatacT
TATAGGCACAGTAATCATAGGTCAAATCTACATACTTTCTTCAAAGGGTT
TGAGTAAGTATTTACTCAATTCTTAAATTTATAAACAGTCCATTTTCCTG
CATACAATTACTTTCCCATTACATTAATGTGTGGTGATTTTTAACCATAT
ATCTATTCTACCTTTTGCTTCAAATGGTTCCACACAAAACTTTCAGTTCT
ATTCCTAATTTTATTTTCCTAAATTGAGATCTTCAAGTTTGAAACTATtg
actttaaaaagaaaaaaatatcaaaataagaacTACAGTGTTCAAGGCAT
TCTTAGGCATTTGGTGATAACCGGGTAAGAAGGTTTCCTAAAGGCTATAG
AATATATATATTGTAGAAGTTTTTTATCTTCTCCTCATAGAGTGCTCGAT
AAGTTAATAGAGCGTTGCTATAATAAAGAATTGacacaatatctttgttt
caacTCTTTATTGCCTTAATGCCCTTAATTTTCGCGCGCCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011336XLOC_011336Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020177-exon-sc0000350-1491911889:406957..407493TCONS_00020177-exon-sc0000350-1491911889:406957..407493Clytia hemisphaericaexon
TCONS_00020177-exon-sc0000350-1510915933:406957..407493TCONS_00020177-exon-sc0000350-1510915933:406957..407493Clytia hemisphaericaexon
TCONS_00020177-exon-sc0000350-1575043694:406957..407493TCONS_00020177-exon-sc0000350-1575043694:406957..407493Clytia hemisphaericaexon
TCONS_00020177-exon-sc0000350-1491911889:420080..420346TCONS_00020177-exon-sc0000350-1491911889:420080..420346Clytia hemisphaericaexon
TCONS_00020177-exon-sc0000350-1510915933:420080..420346TCONS_00020177-exon-sc0000350-1510915933:420080..420346Clytia hemisphaericaexon
TCONS_00020177-exon-sc0000350-1575043694:420080..420346TCONS_00020177-exon-sc0000350-1575043694:420080..420346Clytia hemisphaericaexon
TCONS_00020177-exon-sc0000350-1491911889:422397..422540TCONS_00020177-exon-sc0000350-1491911889:422397..422540Clytia hemisphaericaexon
TCONS_00020177-exon-sc0000350-1510915933:422397..422540TCONS_00020177-exon-sc0000350-1510915933:422397..422540Clytia hemisphaericaexon
TCONS_00020177-exon-sc0000350-1575043694:422397..422540TCONS_00020177-exon-sc0000350-1575043694:422397..422540Clytia hemisphaericaexon
TCONS_00020177-exon-sc0000350-1491911889:422812..423298TCONS_00020177-exon-sc0000350-1491911889:422812..423298Clytia hemisphaericaexon
TCONS_00020177-exon-sc0000350-1510915933:422812..423298TCONS_00020177-exon-sc0000350-1510915933:422812..423298Clytia hemisphaericaexon
TCONS_00020177-exon-sc0000350-1575043694:422812..423298TCONS_00020177-exon-sc0000350-1575043694:422812..423298Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:406957..423298 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.196329	0.19337	0.0628758	0.150645	0.0910968	0.210912	0.228486	0.521375	0.383052	0.377393	0.990688	0.45878	0.334838	0.7414	0.535411	0.223693	0.257077	0.589118	0.493101	0.615018	0.466778	0.76385	0.166024	0.249281	0.523553	0.786063	0.221412	0.234391	0.367816	0.49874
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020177 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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