TCONS_00020191 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020191
Unique NameTCONS_00020191
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2082

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020191 ID=TCONS_00020191|Name=TCONS_00020191|organism=Clytia hemisphaerica|type=transcript|length=2082bp
tgatttttcaatcgtcattttttgtcatttttgggcACTCAATACACAGC
TATCATTTACTGGCTACCTGtttgaacatGTCATAAAAGTTACAAACGCG
TCAGTCTCTGTGCCCTGCCCAACAAGGGGATactcgattttcaacgtttt
agTGCATGTGGATGGCCCCTGTAGCTGGTTGAACCAAAATTTAGCGTGAA
GATTTGAGACTCTATCAGAAAAACATCATAACACCTTAAATTGGTTTCTG
GAGTTCGATCTAATCAATATCAATCAGGTCTTGTACTATCAGTAAAAGAT
TGCCATGATGATCATGTTGTGCAAAGTCAagcagaattttgaaaaactct
tGCTTTTAGAAAGaaaTGGAAAATACTATAACATCTtcaaaaagttgtca
aatggaAACAGATAAGGAAGAAAAGAAGACAAAATACTTTTTCTATTACA
GTAAAGTTCTTTTTGGAGAACTGATAGGCAAGTTGACATCTGCCGTCAAA
ATTTGCAACAACTCTATCTTCATTTCATTGAAATGTAATCAAGATCGAAA
GAGAACCAAAGAAATCTTGCGCTTCAATTTTTCATTAACTAGTAAAGATA
TTGAGGAGGTACATGTCCATTTTGGCCGATCACCTTCCTTTGTTGCTATA
GAGACATCACAACGATTTGCCAAATGTGCATGTAAGAGAATTGGTTCTGA
TGTTCTACACAGCGATGGTGACGTTAGGAAACGATACATAATACTCTCTG
GTGAAAAATTCTTAGACAGTACACTGGCCAGTGATATTGAGCAATGTAAT
TTGATCACAACTTTGTCGAGTTGGACTCGTGTTCATTTATTGTCACACCA
ACAAGCCATAGAAATGATAACTCAAATAAGACCCTCTTTCCAAGACCAAG
TCAAATGGCAACAGTTTCTGGAACAAAGTAAAAAGAAtggtcaaaaatct
tcaaatattcAAACTTCACTTATAGCTCAAACACCTTCAAACCAAGAAAT
CTTCACCTTTACATGTAATAAAGTACGTTTTGGAAAGCTTTTTGGCACTT
CACATCAGCCTGTTAGAGCCATTGAAAGCCGTTTATATTTCACTTTTAAT
TGTGTAATTGCAAGATCCaagaggaaaattttggaaaagtatACTTTTTC
AGTTGGTCCAAGAGATGTGaataatgtttatgtttatcTTGGTCACATGC
CTTCGTTTCTGGTCATTGAGACAACAAAGAAATTTGCAGATGTAGCTTGT
GCACGTATTGGACAGAGAGTGTTATGTCCAGGTTCAAGTGATGCTAAACG
GcgttatttatttttgatgatCGATTCACAGTATAGCTCAAccaaagaaa
aaattgacgagATGAAGGAACTGTTTGAACGATTTATTTCTCCTTGGACA
CGACTCATCATCCTCTCATCATCTTTAGCCATCGACTTTTTGAAAGACTT
GTTGTAATAATCACCCCATTCAGTATTTTGGCGTAATTTGTTTAGCGAAA
CTAGCGGCCCTGTTTTATTTTATCTTATGGAAGGAATTCTTGAAAAGGTA
TCAGACTAAATGTAAATGTAGCTTAagattttgtattttcatttgtttat
aaaGTAGTCTTCATAACTCAAACTTCTATAACTCGTTTGTTATCTTAACC
CGGACAAATTCTGGCACTTTGAAAGTTTCTtaagaaactcttataaaaat
CAAACTTCTCATGTATAATTCAGCATAGCCATTATCTCTCAAAATATAGT
TTATTGAATGGGCTTTTGGAAATAAGGCTGATTTCTGTTTCAAGTGTTTT
TtaataaatcatgaaaaattattctaaaaatttaCTTTTGGGAAATCCAA
GTTATAATTGTAtataatttgtttattttgaacgaCTTTAttaaactttc
tttttcttgttttttgatatttttgtggtTGTCTGAAGGTATGAAGGATC
TGTTGGCTGGTTGCATTTTCAGATGAATCCATTTCATTCTAAACTAATTC
AGCTTAACCAATAACACATATTATTACCAGCATGATaaatcttgaaaact
aaaaCTGTTTCATGCTATTTTCTATCGTCAag
Run BLAST on NCBI

protein sequence of TCONS_00020191-protein

>TCONS_00020191-protein ID=TCONS_00020191-protein|Name=TCONS_00020191-protein|organism=Clytia hemisphaerica|type=polypeptide|length=363bp
MENTITSSKSCQMETDKEEKKTKYFFYYSKVLFGELIGKLTSAVKICNNS
IFISLKCNQDRKRTKEILRFNFSLTSKDIEEVHVHFGRSPSFVAIETSQR
FAKCACKRIGSDVLHSDGDVRKRYIILSGEKFLDSTLASDIEQCNLITTL
SSWTRVHLLSHQQAIEMITQIRPSFQDQVKWQQFLEQSKKNGQKSSNIQT
SLIAQTPSNQEIFTFTCNKVRFGKLFGTSHQPVRAIESRLYFTFNCVIAR
SKRKILEKYTFSVGPRDVNNVYVYLGHMPSFLVIETTKKFADVACARIGQ
RVLCPGSSDAKRRYLFLMIDSQYSSTKEKIDEMKELFERFISPWTRLIIL
SSSLAIDFLKDLL
Run BLAST on NCBI

transcript from alignment at sc0000350:472730..484140+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020191 ID=TCONS_00020191|Name=TCONS_00020191|organism=Clytia hemisphaerica|type=transcript|length=11411bp|location=Sequence derived from alignment at sc0000350:472730..484140+ (Clytia hemisphaerica)
tgatttttcaatcgtcattttttgtcatttttgggcACTCAATACACAGC TATCATTTACTGGCTACCTGGTAGGTTTCCTTCTCGTTTCTCACTCGTTC ATTCTTTCGTGTTTTTCACCAGCCATCTGGGCTCAGGCAATGTGTCTCCC TAGGTTAAGATTAggttatgaaatttttgaaatgaatatttttttttaca tttttacagAGAAATCTCTAGCCAATTTTTCCACTCATTTTTGGTCAGTT TTTGTCAATCTTACAGTATGTGAGAttcgtcatttttttcaattttttga gatCAAGATTTTTAGATGATCAacttttgtcacttttttcaatttttttc tcagactaaaatttttttgagactaaaacattgtatttttttcttcattc agtttgaacatGTCATAAAAGTTACAAACGCGTCAGTCTCTGTGCCCTGC CCAACATTCAAACAGACAGGGGaggtcaacatttataataccaacccata gcccaaaaacctgacttttgaccttttgagctaagttaacaccaccacct taaaaattggtatcgataccaacatgactttttgaatttgacaaaatatc atgggacccacccccttatttagtaccaataccaatctgacaaatttgNA GTGTCGTTGAACCGAAATCACCGGACTCAACATCTGATCAACCCGTCACC ATGTCAACACATGATGAAACCAGCAAGTCATTGGAAAACGATATGAAGGT CATCATTGAACAAGttcatgacgtcatcgatgagaACCCCATCAAATCCT CAACCATCACAGATACAGACCTTACCGTCCAGAAGCTTGAGGAATTACAA GTCCAGCTCAGACATAAGAACCATCAGCTAGGAGAATCCGATCTTCCTGT TCTATCAACGCTCAACCTTATTAAAGATCATAAGTTAAATTCTCGTCTTA CTCAAGAAAAGGAAAAGCACAATCAACTTCGTCTCAATGATCAATCAGTA GCTTTCTCAATAATCAACATTGCTCGCCATATATCGGAACTTCAAGATGT TTACAGTGGCAACCCATCCAAAGCTTCTCTCGGACAGCTAATCGAATGGA AGACCAACCAACACAATCAtctcaaaaagtttgataaagtTGCTGTTGAG TACAAAGAACTCTTAAAATCTCCAGTACTCGATAAACAACGAGACGATGA CGTTAAAAGTATCagtaaacattttgaaaaacttaccACGCTCAAACAAA TTTATACCAAATCACTTGAATCTGAAACCAGCAATCGTGAACCAGACAAA TTCAATACCTTCAACAAGCTGTCACTCAACATCAAGCTTCAACCATTTGC AGGGTATGaatcaaaaattgacttttacaCATTCAAGtctaattttgaga aaattcatcttcatcttcactcAACACCAAGTCGTTTGCTTCCAGACCTt gtaaagaataattttctgGTCGACCCAGCACTAACTCTCGTCAAAAGTCT TGATGATATCGACCTGATATGGCGCCACCTAGAAGATGCTTTTGGTGACG CCAAAATTATGCTCCACAAAAAGTTGCAAGAGTTATCAAAGCTAGACAAC GTCAAGTCTACTAACCTAACAATTCAGAGAAGTTGACAACCAGCCTTGGT AAGATCATCAACGTCATTAACGAAACTATGGTATGAGGCTTGCAAAGGAT CACAAAGTGGAAGAACATCTATACTACGGAGATGGTCTATCTACAATCTA CAACCTTCTTGGTAATCAAAGGACAACCAAATTCCTCACATCCATCATCG ACGATGACCTATCAGAAAAGCAGACTTGGTTGAAACTCATCACATTCCTC GAACGTGAAAAGAAGGTTCATCTACAAAAGTCACTCCTCCAAACTGCTAA GGATGCATCAAATTCAAAGGATGATCAAAGAAAGTCGGGCAGCCCAGGAT CAAACACAGGCTCCAACAGACGATAATCGTCCCATATCACGAGTCCAGAA ACGTCATGCACAATTTGCAACGAACCCACTGGTACCATTGGTCACATTCC ATCATCTGGTCCAAATGGCACCAAAATCCTTCAATACTTCACATGCAGAA AGTTCGTCTTGGCTACACCTGCTCAACGTCTCAAGATCCTTCGTGAAAGA AACTACTGCATGCAATGTCTCTTCCCTGGTGCTGACGCTACAACTGGAAA GCACGCCGAAGGAAGATGCCAACGAGACTTTGTATGTCCACATCCATCTC ATCGAAGGTATGATGTTAAGAAACACTTCCTTGTCTGCAAGGAACACAAA TCCGAAAACAATCAATTACTTGCAAAGTACATTCAACGCTTCATACGTAA TCCATCACTACCAGAATTTGCTCACAACATCAGCTTGACACTTGAAGAAT CAGAGTGCCACAAGATCCACAATCAAGACTGTAATGACAGAGGAATCTAT GCCTTACAACGCATCAACGTCGATGGTAAGAAGCCTCTCGTTTTCTTCGA TTCTGGCTGCAGTGATTTCATCATCAGCAAATCTGCAGTAAAACTCCTTG GTGCCAGATGCTCACAAGAATCATTCAATCCTATCAGTCTTGGTGGTGTT GGTGATGATGTCTTAATGTCAGGTCCTTGCTTGGAAAGGATCACATCAAC CATGCCAACCTATCCACTTGACGAAGTCTTCAAAGACATTCAGCGAAGCT ACACAATATCAGGTGGTAACCAACCATTGCCCCAGCTACCNTCGGTGGTG AAGTTCACGTTATGATTGGTGTAAGGTATCTTCGTTACCATCCAAAATTG ATCCATCAGCTACCATCAGGACTCACGTTGTATCAGTCAGTTTTCCAAGA TTCCTCAGGTCGTCGTGGTGTCGTCGGAGGTCCTCACAAAGCCTTCACTA ATGTTCATCAATACCACCACGTTGCCATTCATCCAACCCTAAGGGAGGTC AAACCTCAAGTTCCTCTTTTGGGATACCAACCAGATTCAACATCAGCATT CCTGTCAACTTCAATGAAAGTCTTCGAAGAGGTGGAAGGAGCAGGAAGTG AAATTGACTATCGATGTCCAAAGTGTCGAGGCTGCAAAGACTGTAAACAT GATTCATCAAACGAAACTATTTCAATCAAAGAAGAAGTCGAACAAAGTCT CATCAATTCTTCAGTCAAGATCGACTTCGACCAATCCATCTCATCTGCTT CATTACCCTTCATCGCTGATCCTACAACTCGTCTCGCCAACAATAAAGAT AAAGCAATGAAAGTTTACATTCAGTAATTGAAGAAGCTCAATCAACCATC AAACCTCACTGACAAAGAAGATATCCTCCAATCTGAAGGGAAGCTTCAGA AACTTGGGTATGTTGAATTTGTTCGTAACCTACCTCAAGATGTTCAATCA AGACTTCGCAGTTCACCTATACACTACTTCATACCCTGGAGAGCCGTCTG GAAGGGAAACTCTCTAAGCACACCCTGTCGCATCGTCTTTGACGCATCTC AATCAACATCTTCCGGGTACAGCCTAAACGATATCTTAGCTAAGGGTCGT AACAATCTCAATAGGCTACAAGAAAATACTCATCCGTTGGTCAGTTCAAC CAGTTGGGATGCATTCAGATGTAAAGAAAATGTACAATACAATCAAACTG GAAAAGAAAGATTGGTGCTACCAACGATACCTCTGGCATCCTGATCTCGA CATTAACAAGCAACCAGATGAAAAAGTTATCAAGACGCTCATTTATGGCG GTCGATCGTCAAGCAACCAAGCGGAACACGCCCTTCGAAAGGTTGCTGAA GCTTCAAAGGAGGAGTTTCTTGAGGCAAACAATGTGGTTCAAAAGGATGT TTACGTCGACGATTGTCTCACAGGTGCACCTGATCACAAAGCAGCTCACA AACTTGCTGACCAGATAGAATTGTCACTCAANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNGggggtctgaaccccccccccattaat atttcatccccccctataaaggtatcccccctatttttaaaattttttga tcctgcaccatttacaggggtccgagcccccagcatataatttgtactcc cagtattggggaagaattttggtgaatgaaatatatttttcattgtgAAT TCGTACCATAGTCAATGAACTTGAAAACACTAGCAAATTTATTGACTTAA ATCAACatataacataaaaaaaaatttttttaaccaaaaagttactatcc ccccatttttattTGATCCCCCctataagctcaaaccccccattttaact ggaaaattgcccatcccccctataaagccttccttgaaaactcggatccc cccttaaaaaaggggggttCATACTATGGTCGTGGTGGATTTGAATTGAA AGGTGTAGCATTTTCTGGAGAAGACCCTCAACCACAGCTTACCGAAGACG GAACGATGATCCACATAGCCGGTTTGAAGTGGTTCGTTAAAGCTGATCAA ATTTCGCTCAACATCGGGGAGATGAACTTTGCTAAGAAGATACATGGcaa aaaaccttcaaaattttcaaatgtcatCCCAGAGAGACTTACCAGAAGAC ACTGTGCATCAAAGGTCGCTGAAGTATTTGATCTTACTGGGAAACCCACA CCACTCATTGCTGGAACGAAGATTGATCTCCAGACACTCATTCATTTGAA GCTGGATTGGGATGACAAGATTCCAGACAATCTTTGAGAGATTTGGGTAA ACAACTTCGATACAATTCAAGAAATTGGCGACGTCCGATTTCGTCGAGCT GTTGTTCCAAAAGATGCTGTCAATTTGCAAATCAACACCCTAGATTTCGC TGATGCAAGCCAACACATGACGTGCACCGCGATCTATGCCAGATTTCTAC GTAAAGATTCCACTTACTCTTGTCAATTAATCTTCGCCAGATCAAGAACT GTACCAAAGGATATGTCGATGCCCAGAGCGGAATTGTACGCTGCTCTCGT CAATACTCATTCAAGTGAAGTTGTCAAAATCATTGCAAAAGTTGCACCAA TCGTCAACCAAATTTACAGACAGCCAGATTGTCCTTCATTGGCTCAACAA CGATGAAAAACCTCTCAAGACCTGGGTCAGAAATCGAGTAAACGAAATCA ACAGATTCACCTCAAAAGNAAAAACCTCTCAAGACCTGGGTCAGAAATCG AGTAAACGAAATCAACAGATTTACCTCAAAGGATCAATGGTTCTATGTGA ACACAAGCGACATGATTGCTGATCTGGGGACGAGGAAGGGAGTAACCATC CAAGATTTTTCAGACGATTCCACTTGGATCAATGGCTACGAATGGATGAC TCGAGACGTTGGAGAATTTCCAACCAATACAGCCAAGGACCTTCGACTCA GCCAAAAGGACATCGCAGAAGTTcaaaaagaaagacaatatcAACTACAT CACATCATCCAATTGCCAGATGCTGTCCAAGAAAGATATCAATATTCCAA TTACGTAATTGACCCCAATCACAGAGATTTCAGCTCAGTCATTCGTATTC TTGGTTACGTAATTCGATTTATCAATATCTTGAGAACGAAGCAACGAGCT ACTTCGACCAATCTTACAGATCTGGAAATCAAACAAGCAGAGACGTACTT CTTCAAAAAAGCCACTGCTGAGATCCTTCAGTTCGTTCCAACCAAAAAGT ACGAACCCATTAGTGTCAACAAAGATGGTGTCTTGTACTTCAATTGTCGT ATTCTGCCCTCAAACCAAATCACAATCGTTGGTAGATTCACTGAAGCAAT GCTGGATTTATCTACAACATCATTCTGTGTCCCACTCGTGGATCGTTATT CACCTATCGCCTTCAGCATCATATCAGATGTTCATTGGAACAGTCGTGTT TCAAAACATTCAGGAGTAGAAACCACTTTACGTGAAGTCAAGAAAAAGGC TTATATCATCGACGGAAGAAATACTGTCAAGATCATCTTGAAGTGCTGTC AGAGATGCAAGTTCCTCAAGAAACAATCAATTCAAGCTTCAATGGGTCCA ATACCTCAAGCAAGAATTACCGTAGCACCTGCTTTCTACTTCACCCAGTT GGACCTGAGTAGACCCTATAAATGTTATTCAACACACAACAAAAGAGCCA CTGAAAATTTGGCTTGTCGTCTATTGCTGTTGTGTCACATCTGCAACATG TATCAACGTTATGGATGACTGTTCAACACCAGTATTTCTTCAATCGTTCA TACGATTCGCATCACGTTATGGATTCCCAAAGAAAATCTTCTGTGACGAA GGTGGTCAACTCATAAAAGGTACCAAAGACATGCGTCCATCCTACAGCGA CATCAAAGGAAAGCTATATCGAGATCGAGGAGTCGAAGCTGAAACTTGTC CAGTGGGTGCACACAACATGCATGGAAAAGTCGAGAGGAAAATTCGGGAG ATCAATTCATCTTTGGAAAAGAATCTTCAGAACGAAAGGCTCTGCTCAAT GATAGCCAACTCGATCAACGATCGTCCAATCGCCATTGGTAACCTCACCG ACATTGAGATTTTTGATCTTGTTACACCTAATCGTTTAATCCTTGGACGT AATAACGATCGCAGTCCAACGGGGGAATTTCTTACAACGACAAATGCATC CAAGTTGATCGATCAAAACTCAAGCATTTACAACTCATGGTTTGAGTCGT GGTTGATGAATCATGTTCCAAAATTGATGTTCCAAGCAAAATGGTTCAAA CACGATAGAAACGTCGTAGTTGGAGATATTGTCCTGCTCAAGAAAGTCAA TTCAGTTTTGTTGAAGACATACACATATGGAATGGTGATCAATGTTAAAC CTGATGATGATGGTAAAGTACGACGTGTCGCGGTGAAATATCGAAATGAT AGTGAGAAGTCATTTCGTGAAACTTCAAGATCCGTTCGAGATTTGATTCT TATTCATTCAGTAAATGATTGTGATCTAATGAAGGACATGTATGAAATGT CCAAAACTGTCGATAATGATTTTTCTTGACTGGGGAAATTTTGTTGGTCT TGGCTGGGAGTGTAATGCGAGCTTGGTGGCTCTGATgtatttttagtaaa ttttcaataagacaaaaaaatttctcagTCCCTAGCCACAGCGTCTCATT TCACAGTCTTCTGTTTCCATGGTTTTAGTGTCACTTCAGTGTTTTGCGTT TATTAGCTTCTGTTTTCAATTAATTNCTTCTGTTTCCATGGTTTCAGTGT CACTTCAGTGTTTTGCGTTTATCAGCTTCTGttctcaataaatttttttt acgcATCTTAATATTATGTTCAATGCGTgcgttgtcattatttttctatt gtttcattatgtaatcttttgttcattttttgtcagttttttttatcaaa atcgaGTCATGgaattcaatttttaactttgattttcatggctggaaccc ccccccccggccgtagggggggggctaaaaggtcgagcagcaattggtac ctgattttttactgtggctaggggggactaaccatgttagggggcaccta atttttcagatggacctgggggctagattctatatttggtgattgaatta cgagcagcctaccagaccataggttggcactttctcatcttatattttaa tctaagcaatgctcaaaaactgacaatttggtatctaatatattatctgc agtgccgtagcaattggggggggggggctatgcccccaataattttttaa aaaatggttattttgcaaaatgcaaagtttttcttttttaatttgtcata attgtcttataagtgcatgttttgagtgcattttcaagcaatctagagct caaatttcaaaatttcccccctcgggccaagccatggttggccctcgcgg tgtcaccaAACTTTAGCCcccctaatatgaaaatgcttcttacggcactg atctgtaaaaattctttaaccCTGTCgcatttacttagataaaaaatctg tctggcTAGGGATCTGCACAAAACCTTGATAATGTAGCATGAGCCTTCAG TAGTTAGCTTATCTCTTatttcttagggcatttattctatttagcaataa gctaaactaactgttgtatttgtttgattgtttgaaaaggattttcgaaa aaatttgacgtgtcattggcttaggggtcacctaaaatatttggcaacca ggggttacctaaatcgtaggggtcacctgaattcttagggggcacctaaa acctgctgccaagccatgatTTTTCAATCgtcattttttgtcatttttgg gcACTCAATACACAGCTATCATTTACTCGCTACCTGGTAGGTTTCCTTCT CGTTTCTCACTCACTCTCACACTTTTTCGTGTTTTTCACCAGCCATCTGG GCTCAGGCATCGTGTCTCCCTAGGTTAAGATTAggttatgaaatttttga aatgaatatttttttttacatttttacggAGAAATTTCTAGCCAATTTTT CCACTCATTTTTGGTCAGTTTTTGTCAATCTTACAGTATGTGAGAttcgt catttttttcaattttttgagattAAGATTTTTAGATGATCAacttttgt cacttttttcaatttttttctcagactaaaatttgtcatttttcttaatt ttttgagactAAAACATTGTATGTTTTTCttcattcagtttgaacatGTC ATAAAAGTTACAAACGCGTCAGTCTCTGTGCCCTGCCCAACAAGGGGATa ctcgattttcaacgttttagTGCATGTGGATGGCCCCTGTAGCTGGTTGA ACCAAAATTTAGCGTGAAGATTTGAGACTCTATCAGAAAAACATCATAAC ACCTTAAATTGGTTTCTGGAGTTCGATCTAATCAATATCAATCAGGTCTT GTACTATCAGTAAAAGATTGCCATGATGATCATGTTGTGCAAAGTCAagc agaattttgaaaaactcttGCTTTTAGAAAGGTTTTATCAGGTTTTATAG CTATTGAATTATTATTCCACTAATACTTTTGCTCACAAACACTTTATTTT TCTAAGTAATGAGAGAGAGGTTCTACAAGGTGAACCTTACTTCCTTTTTT ATAGCTCAATTGTATGAATATTTCTTGTATAGACCAGCTGCCCATAGTTT TATTGTTTGTGGTGGGTGAAATTTATAACAGTTGAGAATTTAGAGCTTGT CTGTATTTCATTTTTGCCATAGTGTGTCATCCAAATTGACCTTTTGGCCA AGTGTTGGCAAATTTGGTCTGAATGTTTCATTTTAAGAACTGCTATCAAA TTCAcctaaaaaatctttattgcTGAATTTTCAGTGAAAATGCCAGGAGA TGGTGATttctgaaaatatatattttttaattctagTAAATAAGTTAAGT TCAAAATCTGCTTATTGTTTCTTGATTTCAAATGAAGCCTAATGTAACGT CTTAATAAACTATGGGGAAGATAAGTTTAGCTTTTACATCtgatgaaaat tttcatttcagaaaTGGAAAATACTATAACATCTtcaaaaagttgtcaaa tggaAACAGATAAGGAAGAAAAGAAGACAAAATACTTTTTCTATTACAGT AAAGTTCTTTTTGGAGAACTGATAGGCAAGTTGACATCTGCCGTCAAAAT TTGCAACAACTCTATCTTCATTTCATTGAAATGTAATCAAGATCGAAAGA GAACCAAAGAAATCTTGCGCTTCAATTTTTCATTAACTAGTAAAGATATT GAGGAGGTACATGTCCATTTTGGCCGATCACCTTCCTTTGTTGCTATAGA GACATCACAACGATTTGCCAAATGTGCATGTAAGAGAATTGGTTCTGATG TTCTACACAGCGATGGTGACGTTAGGAAACGATACATAATACTCTCTGGT GAAAAATTCTTAGACAGTACACTGGCCAGTGATATTGAGCAATGTAATTT GATCACAACTTTGTCGAGTTGGACTCGTGTTCATTTATTGTCACACCAAC AAGCCATAGAAATGATAACTCAAATAAGACCCTCTTTCCAAGACCAAGTC AAATGGCAACAGTTTCTGGAACAAAGTAAAAAGAAtggtcaaaaatcttc aaatattcAAACTTCACTTATAGCTCAAACACCTTCAAACCAAGAAATCT TCACCTTTACATGTAATAAAGTACGTTTTGGAAAGCTTTTTGGCACTTCA CATCAACCAGTTAGAGCCATTGAAAGCCGTTTATATTTCACTTTTAATTG TGTAATTGCAAGATCCAAGAGGANAACTTCACATCAGCCTGTTAGAGCCA TTGAAAGCCGTTTATATTTCACTTTTAATTGTGTAATTGCAAGATCCaag aggaaaattttggaaaagtatACTTTTTCAGTTGGTCCAAGAGATGTGaa taatgtttatgtttatcTTGGTCACATGCCTTCGTTTCTGGTCATTGAGA CAACAAAGAAATTTGCAGATGTAGCTTGTGCACGTATTGGACAGAGAGTG TTATGTCCAGGTTCAAGTGATGCTAAACGGcgttatttatttttgatgat CGATTCACAGTATAGCTCAAccaaagaaaaaattgacgagATGAAGGAAC TGTTTGAACGATTTATTTCTCCTTGGACACGACTCATCATCCTCTCATCA TCTTTAGCCATCGACTTTTTGAAAGACTTGTTGTAATAATCACCCCATTC AGTATTTTGGCGTAATTTGTTTAGCGAAACTAGCGGCCCTGTTTTATTTT ATCTTATGGAAGGAATTCTTGAAAAGGTATCAGACTAAATGTAAATGTAG CTTAagattttgtattttcatttgtttataaaGTAGTCTTCATAACTCAA ACTTCTATAACTCGTTTGTTATCTTAACCCGGACAAATTCTGGCACTTTG AAAGTTTCTtaagaaactcttataaaaatCAAACTTCTCATGTATAATTC AGCATAGCCATTATCTCTCAAAATATAGTTTATTGAATGGGCTTTTGGAA ATAAGGCTGATTTCTGTTTCAAGTGTTTTTtaataaatcatgaaaaatta ttctaaaaatttaCTTTTGGGAAATCCAAGTTATAATTGTAtataatttg tttattttgaacgaCTTTAttaaactttctttttcttgttttttgatatt tttgtggtTGTCTGAAGGTATGAAGGATCTGTTGGCTGGTTGCATTTTCA GATGAATCCATTTCATTCTAAACTAATTCAGCTTAACCAATAACACATAT TATTACCAGCATGATaaatcttgaaaactaaaaCTGTTTCATGCTATTTT CTATCGTCAag

Coding sequence (CDS) from alignment at sc0000350:472730..484140+

>TCONS_00020191 ID=TCONS_00020191|Name=TCONS_00020191|organism=Clytia hemisphaerica|type=CDS|length=2184bp|location=Sequence derived from alignment at sc0000350:472730..484140+ (Clytia hemisphaerica)
aTGGAAAATACTATAACATCTtcaaaaagttgtcaaatggaAACAGATAA
GGAAGAAAAGAAGACAAAATACTTTTTCTATTACAGTAAAGTTCTTTTTG
GAGAACTGATAGGCAAGTTGACATCTGCCGTCAAAATTTGCAACAACTCT
ATCTTCATTTCATTGAAATGTAATCAAGATCGAAAGAGAACCAAAGAAAT
CTTGCGCTTCAATTTTTCATTAACTAGTAAAGATATTGAGGAGGTACATG
TCCATTTTGGCCGATCACCTTCCTTTGTTGCTATAGAGACATCACAACGA
TTTGCCAAATGTGCATGTAAGAGAATTGGTTCTGATGTTCTACACAGCGA
TGGTGACGTTAGGAAACGATACATAATACTCTCTGGTGAAAAATTCTTAG
ACAGTACACTGGCCAGTGATATTGAGCAATGTAATTTGATCACAACTTTG
TCGAGTTGGACTCGTGTTCATTTATTGTCACACCAACAAGCCATAGAAAT
GATAACTCAAATAAGACCCTCTTTCCAAGACCAAGTCAAATGGCAACAGT
TTCTGGAACAAAGTAAAAAGAAtggtcaaaaatcttcaaatattcAAACT
TCACTTATAGCTCAAACACCTTCAAACCAAGAAATCTTCACCTTTACATG
TAATAAAGTACGTTTTGGAAAGCTTTTTGGCACTTCACATCAGCCTGTTA
GAGCCATTGAAAGCCGTTTATATTTCACTTTTAATTGTGTAATTGCAAGA
TCCaagaggaaaattttggaaaagtatACTTTTTCAGTTGGTCCAAGAGA
TGTGaataatgtttatgtttatcTTGGTCACATGCCTTCGTTTCTGGTCA
TTGAGACAACAAAGAAATTTGCAGATGTAGCTTGTGCACGTATTGGACAG
AGAGTGTTATGTCCAGGTTCAAGTGATGCTAAACGGcgttatttattttt
gatgatCGATTCACAGTATAGCTCAAccaaagaaaaaattgacgagATGA
AGGAACTGTTTGAACGATTTATTTCTCCTTGGACACGACTCATCATCCTC
TCATCATCTTTAGCCATCGACTTTTTGAAAGACTTGTTGTAAaTGGAAAA
TACTATAACATCTtcaaaaagttgtcaaatggaAACAGATAAGGAAGAAA
AGAAGACAAAATACTTTTTCTATTACAGTAAAGTTCTTTTTGGAGAACTG
ATAGGCAAGTTGACATCTGCCGTCAAAATTTGCAACAACTCTATCTTCAT
TTCATTGAAATGTAATCAAGATCGAAAGAGAACCAAAGAAATCTTGCGCT
TCAATTTTTCATTAACTAGTAAAGATATTGAGGAGGTACATGTCCATTTT
GGCCGATCACCTTCCTTTGTTGCTATAGAGACATCACAACGATTTGCCAA
ATGTGCATGTAAGAGAATTGGTTCTGATGTTCTACACAGCGATGGTGACG
TTAGGAAACGATACATAATACTCTCTGGTGAAAAATTCTTAGACAGTACA
CTGGCCAGTGATATTGAGCAATGTAATTTGATCACAACTTTGTCGAGTTG
GACTCGTGTTCATTTATTGTCACACCAACAAGCCATAGAAATGATAACTC
AAATAAGACCCTCTTTCCAAGACCAAGTCAAATGGCAACAGTTTCTGGAA
CAAAGTAAAAAGAAtggtcaaaaatcttcaaatattcAAACTTCACTTAT
AGCTCAAACACCTTCAAACCAAGAAATCTTCACCTTTACATGTAATAAAG
TACGTTTTGGAAAGCTTTTTGGCACTTCACATCAGCCTGTTAGAGCCATT
GAAAGCCGTTTATATTTCACTTTTAATTGTGTAATTGCAAGATCCaagag
gaaaattttggaaaagtatACTTTTTCAGTTGGTCCAAGAGATGTGaata
atgtttatgtttatcTTGGTCACATGCCTTCGTTTCTGGTCATTGAGACA
ACAAAGAAATTTGCAGATGTAGCTTGTGCACGTATTGGACAGAGAGTGTT
ATGTCCAGGTTCAAGTGATGCTAAACGGcgttatttatttttgatgatCG
ATTCACAGTATAGCTCAAccaaagaaaaaattgacgagATGAAGGAACTG
TTTGAACGATTTATTTCTCCTTGGACACGACTCATCATCCTCTCATCATC
TTTAGCCATCGACTTTTTGAAAGACTTGTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011338XLOC_011338Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020191-proteinTCONS_00020191-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020191-exon-sc0000350-1491911889:472730..472799TCONS_00020191-exon-sc0000350-1491911889:472730..472799Clytia hemisphaericaexon
TCONS_00020191-exon-sc0000350-1510915933:472730..472799TCONS_00020191-exon-sc0000350-1510915933:472730..472799Clytia hemisphaericaexon
TCONS_00020191-exon-sc0000350-1575043694:472730..472799TCONS_00020191-exon-sc0000350-1575043694:472730..472799Clytia hemisphaericaexon
TCONS_00020191-exon-sc0000350-1491911889:481518..481810TCONS_00020191-exon-sc0000350-1491911889:481518..481810Clytia hemisphaericaexon
TCONS_00020191-exon-sc0000350-1510915933:481518..481810TCONS_00020191-exon-sc0000350-1510915933:481518..481810Clytia hemisphaericaexon
TCONS_00020191-exon-sc0000350-1575043694:481518..481810TCONS_00020191-exon-sc0000350-1575043694:481518..481810Clytia hemisphaericaexon
TCONS_00020191-exon-sc0000350-1491911889:482341..483030TCONS_00020191-exon-sc0000350-1491911889:482341..483030Clytia hemisphaericaexon
TCONS_00020191-exon-sc0000350-1510915933:482341..483030TCONS_00020191-exon-sc0000350-1510915933:482341..483030Clytia hemisphaericaexon
TCONS_00020191-exon-sc0000350-1575043694:482341..483030TCONS_00020191-exon-sc0000350-1575043694:482341..483030Clytia hemisphaericaexon
TCONS_00020191-exon-sc0000350-1491911889:483112..484140TCONS_00020191-exon-sc0000350-1491911889:483112..484140Clytia hemisphaericaexon
TCONS_00020191-exon-sc0000350-1510915933:483112..484140TCONS_00020191-exon-sc0000350-1510915933:483112..484140Clytia hemisphaericaexon
TCONS_00020191-exon-sc0000350-1575043694:483112..484140TCONS_00020191-exon-sc0000350-1575043694:483112..484140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:472730..484140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.092 8.0534 3.57634 3.46208 13.9725 9.58794 8.74255 7.97948 3.63058 4.68202 5.25818 2.427 3.30333 2.66635 2.80807 3.06651 4.10942 4.03524 2.98004 3.1184 4.19388 4.15378 15.4633 15.0259 7.21957 8.76651 5.71401 3.93608 10.575 11.0955
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020191 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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