TCONS_00020204 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020204
Unique NameTCONS_00020204
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2962

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020204 ID=TCONS_00020204|Name=TCONS_00020204|organism=Clytia hemisphaerica|type=transcript|length=2962bp
TTAGGGCTGGGGACGACAAATTTTTCACGCTTGAAAACATTGAGTTGTTC
TCAATCTTCTCTCTTGGAGATGACGATGCCAGTGGAGAAACAATCAGACC
TGGACAAAATCATTGCACTGCTAGATCAGAGCCGACACGTCAATTGCTTA
CGACTGACCATCAACCAGAAGACATTAGTAGacggtggagttggtggttt
tcaCTTGCCAGGTGAACAAGCTTTCTCTGGCAATGTCAACAAAGAACTTG
CGGATGAGCAGACTCACAAACagAACACGTCATCACAAGTTGTACCAACC
GCCAACGCACACCCTCTTCCATCACGCCCCTTATTCAAATCAAGGTCATA
CGAACACGAAGAATTTGGGAGCTCACCTGAAGACGACTTTCTTCTCCCAA
CACGCTCCAAATCGTTCCGCCACATCCGCAACCCTTCACCACCACCTGGA
CATCATATTCAAGATAACACGATGATCAATCATCGAATATCGACGCAATC
AGACACGACGCACACGCCTGAAGGTGGAATCTTTATCCCTGAACCTGAAA
ACGACAACGTCCATGACGGCTTCATCCCGATCGATCCTCCCGAATACCCG
ACCGATGACGACCCACGAATTCATAGTTTCGATAGCGGTCAATTTGGATC
ATCTTCACCCGTATCCAACGGCGCTTTCTCAACTGGAAGtgagATATACA
GACGACCACGTCCAAGTGATTACGTCATCAGAAAACGGCCCTCAAGCGAT
GTCTTTCCCGATAAATCCGATTATACGGAAGATGATGAGCCGTACATGTT
CAGGAACAGTCGTCCCTACTCTGATTGGACTTTGAACCTTCGAGATACTG
ATTACCACTTCTTCCCCTGGCAACTTGAGAATTTTACTGGGAACGGCTCC
ATGTCGCCCAGTATTTCGAGTAGTGTCATCAGCCAAGGGTCTTCAGgact
tgttCCAGATTACGACGACAATGACTTAACCAAAGGTTTCAGCAATCTTT
CTGTCAAGGACCTCAAAGATGTTCACTTTGCAAataaaaaatggaccaaa
attcgACAGATTGGATCTGGCGCATTCGGAACGGTGTACTTGTGTCGTGA
CTTAACAACCGGTAAAGAGTTAGCCATGAAATGCGTGGAGACTGGGTCCG
TCAATCCAGCCGCCATGCAAGAAGTTGAGATCCTTCACCGAGAAATCAAT
CTTTATAAAACGTTGAAACACCAAAGGATTGTTTGTTACTATGGCAGCAT
ACAAGACACTAAAAGTTTGTCAATCTTCATGGAATACATGGAAGGAGGTT
CACTACACGAGCGAATTTCTCGTTCTGGAGCTATGAGCGAAGATGATGTG
CGAAAATATTCTCGTCAAATGTTGGAAGGACTTGATTATCTCCACAATAA
CCATATCATACATCGCGACGTTAAAGGTGCCAACATCTTATTGGATAAGA
ACGATAACTGTAAACTTGCAGACTTTGGTTCATCGAGGCAAATTAAGACA
ATCCGATCAAAAACGGGGTGCAAATCGGTTCACGGGACGCCCTATTGGAT
GAGTCCAGAAGTGATCAATGGGCAAGGTTATCGATGCAAAGCAGATATTT
GGTCATTGGGATGTACAGTGGTGGAGATGTTGACCACCAAACCACCCTGG
TTCCACCTGGAACCTGTTGCCGCCTTGTTCAAGATCGCCACACAACCCAC
CAAACCACAACTGCAAGGGTCCTCCCTCATGTGCATCAAGTTCGTCGAGC
TCTGTCTTGAAAAGGACAGCAACGTTCGCCCATCTGCTCTTGAGCTATTA
CGTCATCAGTTCTTAGTAGACCGATAGCCTTGGTATGAAGCGTGTAGCCT
GACTTGAATGTGCGAGTTGTGGATTGGATATAGTGTCCTCAAAACAAGGA
GGAGAGAAGAGGATGTCACGTGACTCTCTCGTAATTCCAAAAAGATTCTT
TCAAGGAGATACGGAAATGAATATCGTGAAAGTTAAACCTTTTCAAATTA
AAATCGAATGGAAATTCTCATTGAGTCTCCGAGTGTTATCAAACACCAAG
AGATATGGTTTTTCACCGAGAACGCGATCCTCCAGGGATTTTGGCTTCCA
ATCTCTCCTGTTGCCAATGGTCAAATTAAACATTGAGAAAACACGAATAA
AGTCGATCGATTCAGAGAAAAGCTCCTTTTGAGGGGCAGTTTTAGATTCA
CCATTGGATGACGCTCGATAGTTCTAAAAAGCGACAGACCTATGCAAAAA
TTGCGTTCGGACTTTTTGACGAAGCATTGTGAACGTATTTAAGGAAACAG
TTTTTCAAAACGAAAATTCCATCCGTTACCCGAACGAACGAACTTAAAGA
GTATAATAAACGAAAAATACATTAAATGATTTGGACTGAATGAAAAGATT
TGATAAACAGACAGAAGAAGAAGGAACTTTAAGACTTGAGTTTTTATATT
CCCGATGAGATAATTATTAGACGATTTTTATGTGCATCGATAAACTACCG
TTTGCACCGATCTGAACTTTTGGTggcagaaaaattatttcatataGTAT
AtgacttgttttgattttatctgcatataaacaaatatattgTTAGAAAG
CTTTTCTCGATAGATTAAAAAGTTATGGTCAAAAAGTGTCTTTACCACAA
CCCTACATATAGATTTGAGTACTATTTTTGCCAGAACTTTTTGGATACTT
AGGTTTCACTCACAGGGAACGCTATCATACAGATGCAGGTCCGCAAATTC
TTATCTGGTGCTTTCGGTAGTCCGCATTTTATGTCAACATTTTTATGTAA
ATAGCCAATCCCATgtgatatattttttcaattttcctttagttttttaa
agatttgttgtttttttgtctgttttcttTACCGTCAATATGACATGATT
AGTAAGAAATTTGATGACTAGATAAATATATGCTCAGAATGAGCGCTAAT
TCGAATTAAATT
Run BLAST on NCBI

transcript from alignment at sc0000350:29785..44315-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020204 ID=TCONS_00020204|Name=TCONS_00020204|organism=Clytia hemisphaerica|type=transcript|length=14531bp|location=Sequence derived from alignment at sc0000350:29785..44315- (Clytia hemisphaerica)
TTAGGGCTGGGGACGACAAATTTTTCACGCTTGAAAACATTGAGTTGTTC TCAATCTTCTCTCTTGGAGGTACACTGACTCTTCCACTATTTGCACATTT ACAAGTCTGTGCAAGAACCCTCTGTAACTTACCATATTACTTCGAATAAA CACCACCTACCTTTTAAGCACCCCTCGAATAAATGCCCTCCCTAATAACC GAGAAAATTAGCAAACGCCTTGGGCGTTTACTCGATGCGATTCAAATAAA GTTTTCTTCTGTATTAGTTTGAAGGGTATTTTAGCAGGGCAATATTTTTG ACACTTCCCAAGTTTTCGTGATTTACAGTGACCTTTCTACGACTCCTGTA AATCTTTTCGCTCTCGACCATTAACCCGACATTGAGGATGAATAATATCA TACCAGTATAATCGATTTGGGTCTTGAAAAGAAAAACTGATTTTTAAATG AGTAGCTGAAATTGAATTGCTTCTTGATAAAATTGTATTCGAACTTTCTT GAAATATAGTAACTGATGAGTCAAGAACTGAAATACTCTATCTCTTTCAG ATGACGATGCCAGTGGAGAAACAATCAGACCTGGACAAAATCATTGCACT GCTAGATCAGAGCCGACACGTCAATTGCTTACGACTGACCATCAACCAGA AGACATTAGTAGACGGTGGAGTTGGTGGTTTTCACTTGCCAGGTGAACAA GCTTTCTCTGGCAATGTCAACAAAGAACTTGCGGATGAGCAGACTCACAA ACAGGTATTGTTTTGTTTTTCAGGTATTATTGGGCTTTCCAGGAAAATAA AAGCATGAATGTGTTGTGTTGGGGATATCGGGCATTCTAAAGGCCAATGA CGAACGTTAATTGATATCCACGGATCATGTAATTTGACAAGCATAAAATT ACGAAATTTTGATAACTACTTTCAACGAAAAATCAATCTGGTAACGGTTT TTTTCCTGGAAAGACACTTGAAAATTTGACCCTTATTGCCCTCGACTCAT TTTTGTTGGAAGACACTATGCTTCCTACTAAGAAACACAAAGAAACACAT TCCAAAAACTTGCTTTTTGGTATTTTGACACAATTTGCTTCGAATAAATG CATCATAAGCAATTTTTCATTTCCTACTTTCCTAAATCGGTGTAAGAGAG ACTGCATAAAAGATACATTTAAAATAATGACTCCTTTGACGTCACAGCTA TTGACTGACGGTAAGCCGTTAATAAAAAGTGGAATCATTTCTTTCGCCTC AGTTCTCAGAATTCACTTTCTTTCGTTAAGGCAAAGAAAAAGGCATTCCT TTCCTTCTCAACTTTCTCAACATTTCTTTCGATGCGTGGGCTCATTAGTT TTGCTTATCTTTTCATCGCTTTTCGAACAAAAAACATTCTGAAATGCGGC TCATTTAAGAGCTCACTAAGCTCTCAATTACTTTAATGAATAAAGATAAT TGCATGATGCGTGGGCGAGGGCGTTACATGGAGAAATTTCGTGCAGATCA TTCAATTAAAATGCATCTAGCACTGATACCCAAATTACGTCAGAAATTTA GAAAATGACCCGTGTTACAAAGTCAGATTTTCCTTAGAAAATATTTCCCA ACTAGACATAAAAACGTCAGTATTTTCTGTAAAATCATAGTGTCCTTCAG GGTCTCTTCCCTCTCATACCTAGAATCAAAATTTTCCATCCCCCCTCATT TTTCCCCACCCTGCCTCCAAAAATTTCTCTGTCCTCCCCCCTCAATCATA AAAAGCTGTGATTTGATGAATTTAACGCTATTTGTTTTCCCTAAGGTAGT TCTAATTCAAGAATAAATGGAAAGGATGGGGTTTTAAACCGTAATATTGC TGGTTGAAATAAATGAAAGAAAAACTAATCATATGCTATACACCCAATTA AGTGATAGTAAAACCAGATGTTTTTCAATTTTGAATTGATTTTGGTGAGT TCCCCCCATGCCTAGAATGAAAATTTTCCATCCCCCCCCCTGGCTTCAAA AAAAATTCTTTCCCCCCTATACGTCCTTTTGACCTCAAAACCCATTCCCC CCTGAATTCAGGGGGGGGAGGACACAATGAAAATGACAAGTATTTTCATC ACTCTGTTCGGCATTCTATTTTACAGAACACGTCATCACAAGTTGTACCA ACCGCCAACGCACACCCTCTTCCATCACGCCCCTTATTCAAGTAAGTTCC TTTCGACCCTTTGATAAAAATTCCAAAATCTACATTTTCTGATTCTAACT ACGTTGTAATTATCATGTTATATATGCGAGATATTTGATTTTGGACCGAC CAGCACCTAAGCGACTCAATGCTGAAAAAATATTCTAGTCAAATTTCAAG CGGGACTAAATGGATATTTCCACCACAAATAATCGGGCTTTGGATTTCAG AAACTTCTCGAGAGGTTTGTGGCGTTTCATTTTTTTTGGTCTTGATTCTC AGAAACTGTTTATTTTCCAAACGTATCAGATTTTTAGCCTCAGATTCCTT CAAGTGTTATGATGTGTCTTTGACGTCCTTTGTTTATTTACCAAAATAGA AAAGAGATTTACGGAGTAACAATTTGGCTACGACCTCTCCTTACAGTAAA AACACAACCGCCCTCTCTCTTTGACTTTGCTCTCGTGCCAATGCTTTATT ATAACACCTCGTTTTCGACAGTTGCTAATTTTTTTGAAATTCTTCTTCGA AACTGTTCTTACCCCTCTTTGTTGGGGGAATTCTTATAGCGGCTAATTTC CAACTTTTGAACTGAAGCTGACGAATAACCATAAATACGAAAGTGTCGAT AAAATATATATTCAATAAGGACATATTTAGTTTTCACTTTGTGTTGTGGT ACTGTCATTTCTCTTTTGGATACACTTCCAGGTTCACTGTAATTGATTTT GAAAATTCCAAAATTTTCCCTTTCCTCAGCCATGTTTGCTTGATAAGAGT AATAATATTCAAATGCCTATGCACACCTCGGATTCAAAGCCGACGACCGG GCGCTCTGGATACAATTCAGTGGAGACTCGCCGTGGTGTGTGTGCACGAG AAAGACCTTTTTGAAATATTTGAGCGGTTAGCTCAACTTTCTATTCTAAA GCCTTACATAAGCCCTCACAGTCACACGACGTCATTATATTTCAAAAGCT CTTTCATTTCTCTCTCCCTTTTTTTTTGATAAAAAGTTTGTTATTGATGA TGATTCAGAGTCGATCAGATATCATAAACTGTGTCGTATTATCTTTCCAA CTAACCCCCTTCTCTCGCTTTACCTATTCACAGATCTTTTGAATGTCATG TAGTGAAAAGACTCGCGGAAGTTTATCAGTTTGTTATCCTCCGTGTTTGT AATTCGATGACATTAAAGTGACTTTTGATCAAATGTCTACTTTATTTGTT TTGATTTTGAAGTATAACGTTCGTTCTTGAAAGTCTACTTTTACATGCAC GAACTTGAAAAGAGGGAGAGCGTAGGCTTTTCTTGAGATTACAGTAGATG TATGTGATATTTTGCAAATGGATTTTATTTGACCAAGTTGTTGAAAATAA TTGACAAGGACGATATTTAGAACTTTATGTCTTGGGAATTTGAAATCATG CGTGAACTAAATCACCATTACTTACCGTGAGTGTTTGAAATATTTTGACT TTTTCAACAACTTTCTCTTTTTTACAAGTTAGTTTTTTATTATCAGCGCC AATTCATTCATTTATTCTCTAGGTACATACAGCCAACAGTCAGTGGAATA GACCTTTTCATAAATTACGTCACGAACAACGCTTACCTCGTTTTCAAAAT ATTGCCATGGTTATTGATTCCCAGAGGAGATCATAAGAAGTTTACTCTAT TTAAACAAGAGCAACACTTGAAGACTCGAGGGATTTAATCACCTTGGTAA TATCTTCAAAACGAGGCAGTCGTTGAACTGAAAATGATTTTTGAAAAGAC TTATTGTAGTGGCATTTTCGACTGACCCTTAATGAGGTCCAAACTAACAA CGATTTTTGGCAAGTAAACTTGTCAAATCTCAGATTTTGATCACAATAAA GTTTTTTAAGGAGCTAGAATATGAAACTGCTTTGTCAATGGTTGGTGAAT ATTAAACTTGGTTTGAATCCGTGGTTGTGTATCAATTAGAGCTTTTTGTT GATTTCTCTGTCTGTCTGCCGAATGTAGTTTGATTTGGTTTCTTTTTTTG TGGCTATCATCCAGAACTTCGTTCGTTTTTTCACTATGTGCCTTTAAAAT TGTTTTAATAAAGTAACTTTGTATTGCTGGAATAATCCTATTATTACCTA TAAATTAAAAAAAAAATCAAGGGAAAAAGGGAATTTAAAGGGAAATCAAG GATTGATTTTGCCACAAATAATGCAACATTTCAATGTTTGACAAATTTAC ATCTATTTTCATGGCTTAAATATTCAAGTTATTCTGCTCTATGTGAAAAA CATGCTTACAAAAAACTTGAGATGGACTGCCACTGACTTCCTTTCGACAG TAATTTTCTGTACATCCCGTTTCTCTAATTATTATTTTTATAAAGAAACT TTCTATAGTAATTACTATATATCTCAGCATTCGATGAGATACGTTGTGTG GAGATATGTTTTCTTCTCAATCACTCTCGTGTTTTGATAATATATAAACG ATCGAGAATATTTTAAGTTTTTCCTTCATACCTTTACTTTACAATTGTGG ATGGAGTGAGGTTTTATGATTAAGTTCAGGTTAGATTACAAAGGTATCTG ATGAATGATGCATTCTTGTAACAGATTTTTTATGATATGTAATGCGTGGC AGTTTCTCTAATTCTTGGTTAATGATAGTACTTTCGTATGTTGATAAAAT CAAGGTTTTGATTTTATAGTCTGTTCACGGCCAAAAACGTGATAATTTTT TAATATACTCAGAAAGAGTTTAAAGCATCATAATACTGTAATAGTTTATC AGATGGTTTAATCATACGAGAGTAGAAAAAATACAATGAAAAGTCATTTA TCTTTTCTTGTTTAGCGATATTTGTTACTTTTGAATTCCTTGTCCATCGT AGTAAAAACTATGATGAGTAAATGACTTATTTTTACACTGAAGAATATTT TGGTGTCACTTTTCTGTCATTTCAATGTTTCCAAAATATGGAAAGTGACA TAATGATCGGAAATTCAAAATAATTCTCTTTCTATCTATGAACAGCTTTC CTCAGCGTTTTTTGTTGGCATATAATTTTTTGATTGGTATAATTTTGTTC AGTCCAACTAATTAATTTTGACGAGTTTGGAAGATGTAGGAAGCTTATTA AGTTCTGTCTTCATTTGGCAAACAATGTTGTATTATTTTTAACTTAAAGC CTTTTTTGTGTCCTCGTATTCTTGTCGGTGATTGGAAGCGTTATAAACCA TGAAGTTGATGATAAAATGATAAAAACTTTTCTGTACTGTTTGTTCTTCT CAGTTTTCGGTTCAAACTCTTGATAGCTCAAATACTCACATAGTTTTAGA TTCAACCATTTATATTGAAGGGAGACTAGTTGAGATTAGTTATGTCGTGT TGTTGATAAGTCGTCGAGTCATGTCGAGTTGATGAGCCTCTTGAAAGTTG AGCAAAACGAGAAAATCTTTTGAAGAAAATAAGAATATTGAGTTTCGAGT CGCGGAAGGTTTTATTTATCGTTTCTCAATGTTCTGACCCTCCTCTACCT TTAGATCAAGGTCATACGAACACGAAGAATTTGGGAGCTCACCTGAAGAC GACTTTCTTCTCCCAACACGCTCCAAATCGTTCCGCCACATCCGCAACCC TTCACCACCACCTGGACATCATATTCAAGATAACACGATGATCAATCATC GAATATCGGTATGTAACTTCTCCCACCATCATGGTCAGCCCCTCTTACAG ACCCTTAAAGTCAAAACTCTTCACAAATCGCATTTATAGACTCAAGGATT AGGAATTTTTGGTTGACTTGTAGGAATACGTCTCTTGTGAAACGATCTCT TAAGAAAAATCGAACGTTCTGCCCTTTCATTTGGGTGATAATGATTCAAT CTACTAAAGCAAAGCAAAATCTCTCCCCCTCTATTGTGGTTGAATAATAA CAAACAGTTTCTTTGTTTTTGTTGACAGACGCAATCAGACACGACGCACA CGCCTGAAGGTGGAATCTTTATCCCTGAACCTGAAGTAAGTGATCTTAAT GCAATTTCTATATCTTGAAAATTTATTTCCAAGAGTCTATCCGACAATTT GTATTGTCTTGTATTCAGCATTTCGGAAAAGTTTTTACTACAACTACGTT TTCATTAATATCCAGCTCGATCTATTTTTTGACCTCAACAAATTACTTCA AAATAGCTAGAAATATTAAGTCATGTATCTCGAGCTTTTCAAAGTCATTG GCCCGCTGTTTTATATCCATACTACTATCTCTTCACCCGACAGAACGACA ACGTCCATGACGGCTTCATCCCGATCGATCCTCCCGAATACCCGACCGAT GACGACCCACGAATTCATAGTTTCGATAGCGGTCAATTTGGATCATCTTC ACCCGTATCCAACGGCGCTTTCTCAACTGGAAGGTAAGAGAGAAGGATTG GTTGCTAGGGTAACAAATGAAAGTGTTTAATATATTGTCAGCTATGTCTT ACTATAAAATGCTTGTTGTGGACACCTAGACTTGTCATGAAACATCTTTT ATAAGCATAGCAGGCCTTACCAATGATACATTGAAATCCTGACCTTTGGT TGTAATTTGTAAATTATATTTTTCTTTGTGAAACTCGAATTCTATAAATC CATATTTTCTTTTTCAGTGAGATATACAGACGACCACGTCCAAGTGATTA CGTCATCAGAAAACGGCCCTCAAGCGATGTCTTTCCCGATAAATCCGATT ATACGGAAGATGGTATGTTTCTTATTTTACTAAAATTCTAGGTTACACAC ATCCCTATAATATGCTTTTATATAGGGAATGCGTATCGTGTATAAAATTC CCGTCCCAGAATTACCTCTGTCTTTATGATTTTGAGTTTTAGAAACTTGA TTAACTTGATTGGTAAGTTTTATAGTTTATAGTAATTATAAAATTTGAAT TAAAAATTTGAATGGCTAGAGTTAATACAATCGCTGGATTTCTGAAAATC TTTAAGGAAATTGAAACAGGTTACCCCAAATTTGAGGTAATTCTGGGACG GCAATTTAGACACGATTAGCATTACTATATTAAAACATGCGTGCAGCCTA CTAAAACTCGTGTTTTACACTTTATGGTAATTGGACATTATGGTTCTCCC AGGCCAGACTATAAAAACCTTATATTTACTCCCAAAGAGGTTTAGGCTCC ACTGGTCTCGCTATCGTTCTATTTTTAACTCTCATAAAAAACAACTTGTT GGTTCTATCCATTCATATCCATCGATTCGCCATTCATGAAACATTCTCCT TCCTTTGCATTTTCAGATGAGCCGTACATGTTCAGGAACAGTCGTCCCTA CTCTGATTGGACTTTGAACCTTCGAGATACTGATTACCACTTCTTCCCCT GGCAACTTGAGAATTTTACTGGGAACGGCTCCATGTCGCCCAGTATTTCG AGTAGTGTCATCAGCCAAGGGTCTTCAGGTACGCGTGGCTAATCGATTTC TTTACCTTGCATGTTTCAGAACATTCTCTAACTCCTATTTGAACGACATG CTGGAAGTTCGAAAATTTGATTATTTTTTATATTAGACATTGTTATTTTT TCCTTGCTAAATTTTACCATGCATAGTAAATTTTCCCTGAGAGCTTTTTA AGTTATCATATGCGACTCCAATGATCGTCATCCAATTGACTTCCACATCT CTGACACAGGACTTGTTCCAGATTACGACGACAATGACTTAACCAAAGGT TTCAGCAATCTTTCTGTCAAGGACCTCAAAGATGTTCACTTTGCAAATAA AAAATGGACCAAAATTCGACAGATTGGATCTGGCGCATTCGGAACGGTAT AGTTTGTCCCTTCTTCGAATTTGCAAATTAATTTTTAAATTTCTTAAATG TTATTGCTTTAACCTACTTCACTTCCAGCTGTTTATAATGTTTACCATCA AAAACTATCGCCAATTGCCCGCTTTTAAATCTTATCACTTATCTAAAAAA ATATGATTATGTGATATAATAAAAAATCATCAAATTGCCGAATACCTATC ACAGAAAACCGAGCCGGCTGGCAGTGGCAAATTTTTAAACATGTAAACCA TAGACATTTGTTTTGCACCCATTTTAGCTTCTGTAATTCCAATATCATTC ATTCATACAGGTGTACTTGTGTCGTGACTTAACAACCGGTAAAGAGTTAG CCATGAAATGCGTGGAGACTGGGTCCGTCAATCCAGCCGCCATGCAAGAA GTTGAGATCCTTCACCGAGAAATCAATCTTTATAAAACGTTGAAACACCA AAGGATTGTTTGTTACTATGGCAGCATACAAGACACTAAAAGTTTGTCAA TCTTCATGGAATACATGGAAGGAGTAAGTTGTCTTCTTTGATGCATCTTT GTAAATATGATGGTCAACGTCTTTTTGGACCTACCTGGAGGTTCTATAAA TTAACCTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG TTCGTTCGTTCGTTCGTTCGATTTTTTTGCTCAAAGTGGTGTATTAACAA TGCCCGAAACTAACCGAGTCCGATTTTTTAGAAAAAAATTTTTCCGGCGG AAAATGCCGGAAATATGCCGGAAATCGCCGTTTTTCTGGATTTTCATTGG TCGGACTTTTTCCTTATTTTAGGTTGTTTTTTGGACCTACCCCGGTGGGG TGGAGCATTGAGTTTCAAGCCCGAAGGGCTAGAGGTCAATCTCTAACCTT TCTCAGGCAAGAAAAATTGAAGCCTTAAAATATGCGCCGTATTTTTGATG ACGGCTTGAATCTAGCAATTCCTTTGTCTTCGAGTGATATATTTTTCGAA ATTAAGCGGTAAATTTTAGTTTCAATCTGTCATTTGTGTAAAAACCAGGC GGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCTGGCGGGTCG CTCAAGGCCGCGCAACTTTGGTAGGATTTGTTGGCTTCAAATCCTACCAA AGAGATTGACCTCTAGCCTTCGGCTTGAAACTCAATGGGGTGGAGGTCCT ATAAATTAACCCGTGTTCGTTAGTTAGTTCGTTCGTTCGTTCGTTAGTTA CCAACTTTTCTCGAGATTGGCTCATTAAATTTTTCTGATTTTTTGCACAA AGGTGCATTACTATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAAAA AAAATTTTTTCCGGCCGGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNATTAGTTTTTTGCGATTTTTTGCAC ATAGATGCACATTAGTACTGCCGAAAAGGTGTCGGAAACCGTTTGCCGAA AAAAAATTTTTTGCGCTCTGTAGAACCGGAAATGTGCCGGAAATCGTCGT TTTTTTCACATTTCCGTCACATTTTTTCAACTTATTTAATTGTTCCTTTA CAGAAAAATGTTCTTTATGATGATGCCCAAAACTTAGCATNTTTTCCGAC CGAAAATGCCGGAAATATGCCGGAGAAACCGGTTTTTTGACATTTTCTCG ATTTTTCATCCTTAGTTTTTTCTGATTTTTTGCAGAAAGATGCGTATTCG CAATGCTCAAAACATGACCGAGTTCGATTTTTTTATAACAATTTTTTTCC GGCCGAAAATGCCGGAAATATGCCGGAAATCGCCGTTTTTGCAGACTTTT TCCTAACATTTCATTTCTTCCTAAAAACATCATTGATAGCAATTCCCACC ATCAAGCATGATTCGATTGTCAATATAACTGATTTCTGCAACCGGAACTT TCTATATCTTTTTTCCCTTCTCCCCTTCCCTCTCCCCATCAACAATCAAT GATGAAATTTAACGCGTTATGCCCTTTCGCTAAACATTATATTTTCTAAC GGATTGTTTCCGTTTTTCTCCTTATTGCTATCTAACTTTCATCATTAGGT AGATCCACCCAGCATCTAGCTTGTTTTGGTTGTACTAGAATGTACTTTTA TTGAGCCAATCTTATATTTTTATTCAAATTTTCCAAAAAAAACTTGTGCT ATCGATGAATACAAAAGCTGATTAGGAGAGTTCATCTAACAATTCCAAAC CATCTAAAGAACGACAAAAACTTAAAAAAGAACGACAAATTTTGCATGCA TTCTAGTGCAATATTTGATGTTCGACCAAAATTTGTCTGGTATCCTTTAT AATCAACCTTTGTTACGTATGATTCCTACTAGCGACACAACATCACATCT TAACCTTTGTCATTTCTCTTCTTTTAGGGTTCACTACACGAGCGAATTTC TCGTTCTGGAGCTATGAGCGAAGATGATGTGCGAAAATATTCTCGTCAAA TGTTGGAAGGACTTGATTATCTCCACAATAACCATATCATACATCGCGAC GTTAAAGGTATTTTAATCTCCGTAACCTTATTATACGATACCTGTAGAAC TAATTTTGTCAGTCACTCTAAGTTTTGCATGCCTAAGTACATCGAAGCCA TTGTCTAGCCTTTCGGTCGAATCTGTTAGCAAGTTTGAGAAACAACTCCA CCACTAGTTGCATTCGGAATTCTTTCACTTATTTTCACCTTCATCATAGG TGCCAACATCTTATTGGATAAGAACGATAACTGTAAACTTGCAGACTTTG GTTCATCGAGGCAAATTAAGGTACGTTTATCTCAATTTACACTTGTCAAC TTTCAATTTTAATTATCCTTTTAGCGGCGACATGCTCCAAGACGGCCTTT AGAGTTGCCTTATTAATACTCAGTCGGAATATTCATTTATTTAAGGGCTC TGACCATNCTGTTACGTATGCTTCCTACTAGCGACACAACATCACATCTT AACCTTTGTCATTTCTCTTCTTTTAGGGTTCACTACACGAGCGAATTTCT CGTTCTGGAGCTATGAGCGAAGATGATGTGCGAAAATATTCTCGTCAAAT GTTGGAAGGACTTGATTATCTCCACAATAACCATATCATACATCGCGACG TTAAAGGTATTTTAATCTCCGTAACCTTATTATACGATACCTGTAGAACT AATTTTGTCAGTCACTCTAAGTTTTGCATGCCTAAGTACATCGAAGCCAT TGTCTAGCCTTTCGGTCGAATCTGTTAGCAAGTTTGAGAAACAACTCCAC CACTAGTTGCATTCGGAATTCTTTCACTTATTTTCACCTTCATCATAGGT GCCAACATCTTATTGGATAAGAACGATAACTGTAAACTTGCAGACTTTGG TTCATCGAGGCAAATTAAGGTACGTTTATCTCAATTTACACTTGTCAACT TTCAATTTTAATTATCCTTTTAGCGGCGACATGCTCCAAGACGGCCTTTA GAGTTGCCTTATTAATACTCAGTCGGAATATTCATTTATTTAAGGGCTCT GACCATAGTGAATTTTGATATTTGTCATGTACAAAATATAAATTTCTGCC TGATTTAGCTGGCAAAACTTTGACATGTTATACATTTTCTGTTAGGCCAA CTATCTTTGAGTCTGAAAATTTAAGAATCGCAAAGAAAAAATTTGATGAA GAAGAAAATGAAGACTTTTGCGACGAAGAGTATTTCAACTTTGAAGACCT TATTTTGATCGAAGAAGAAATATTTTGAAAAAACTTTTGTGGTAGATGGT GTATCTTTTACCGAACTAGAAATCTATTTTCGGAAAATTTTTCTAAAAGC TTAATCTTGAAAAAAGTGCTTTTTGACCAATTTTTCATCCCAAATGTTCA TAGAAAAACAGCTATTACTCTTGATGCATCAACTTAGAAAATTGTTCCGA AAAATTTAAAACAGCTCAATTATTTGCGGACAGTTTGAAAAAATATAAAT GTTTGAAATAATTTTGTAAAGACAATTCTTTGTTAAAAGTGTAAAGGAAC CTCAGACATAACTGTTATGCTCAAATACCAAAATCAATTTTTTGACTATG GTCAGAGTCCTTAAACTTCCATTTTCCATTCTTATAGACAATCCGATCAA AAACGGGGTGCAAATCGGTTCACGGGACGCCCTATTGGATGAGTCCAGAA GTGATCAATGGGCAAGGTTATCGATGCAAAGCAGATATTTGGTATGTGTT CACCGTTTAAAGTTCTCAGTTTTCGTAATTGTTTTTGGCAGATCGGATCT ATCGGTTGATGGGTATATTAGAACCCAATAGAAACAATTCGGACTAGTTT GATTAATTTTAGAACCCATTTAAAGTCTTTAGACCTGAGTAACATGTTTT ATGACGAAAGAGTATTAAAAATACACAGAGAAACACCCACGCTCTATTCA ATTAATTAATTGCTTCAAAATGCGTTGACTCTCACTTGAGATATTGGTAC AAGTTGCAGAAGATATAATTTTGATTGTGCTTACTTCAGGTCATTGGGAT GTACAGTGGTGGAGATGTTGACCACCAAACCACCCTGGTTCCACCTGGAA CCTGTTGCCGCCTTGTTCAAGATCGCCACACAACCCACCAAACCACAACT GCAAGGGTCCTCCCTCATGTGCATCAAGTTCGTCGAGCTCTGTCTTGAAA AGTAAGTAACCTTCTTATACACAGAGGAATGCTAAGACTTTTACCCAATG AGTTATTAAAAAATGCTATAAAAGTCATTATCTACAAAACAGTATAAAGG TGTTATAAGGAACACGAATCTTTAGTGGATGCCAGCTGCCTATAAAGTCC TTTAAATTGATCAAGGTTACCTTTTGGCTCATATCCTCTGTGTTTTGATT GTTGTTCTTCTTCGCCTTTGATTGATAAAACAGTCAATTGAAACCTAATG GTTTTCAAACACAAATTTTGATTGAAGTGGATTAGAATTAATTACCAATC AGTTAGATCTTCTTAATTGTTTCGCTTCGTTTTCTGATTAATTCATTTAA TTATCGCCATCCACTTTCTTTTCATTGTTCAGGGACAGCAACGTTCGCCC ATCTGCTCTTGAGCTATTACGTCATCAGTTCTTAGTAGACCGATAGCCTT GGTATGAAGCGTGTAGCCTGACTTGAATGTGCGAGTTGTGGATTGGATAT AGTGTCCTCAAAACAAGGAGGAGAGAAGAGGATGTCACGTGACTCTCTCG TAATTCCAAAAAGATTCTTTCAAGGAGATACGGAAATGAATATCGTGAAA GTTAAACCTTTTCAAATTAAAATCGAATGGAAATTCTCATTGAGTCTCCG AGTGTTATCAAACACCAAGAGATATGGTTTTTCACCGAGAACGCGATCCT CCAGGGATTTTGGCTTCCAATCTCTCCTGTTGCCAATGGTCAAATTAAAC ATTGAGAAAACACGAATAAAGTCGATCGATTCAGAGAAAAGCTCCTTTTG AGGGGCAGTTTTAGATTCACCATTGGATGACGCTCGATAGTTCTAAAAAG CGACAGACCTATGCAAAAATTGCGTTCGGACTTTTTGACGAAGCATTGTG AACGTATTTAAGGAAACAGTTTTTCAAAACGAAAATTCCATCCGTTACCC GAACGAACGAACTTAAAGAGTATAATAAACGAAAAATACATTAAATGATT TGGACTGAATGAAAAGATTTGATAAACAGACAGAAGAAGAAGGAACTTTA AGACTTGAGTTTTTATATTCCCGATGAGATAATTATTAGACGATTTTTAT GTGCATCGATAAACTACCGTTTGCACCGATCTGAACTTTTGGTGGCAGAA AAATTATTTCATATAGTATATGACTTGTTTTGATTTTATCTGCATATAAA CAAATATATTGTTAGAAAGCTTTTCTCGATAGATTAAAAAGTTATGGTCA AAAAGTGTCTTTACCACAACCCTACATATAGATTTGAGTACTATTTTTGC CAGAACTTTTTGGATACTTAGGTTTCACTCACAGGGAACGCTATCATACA GATGCAGGTCCGCAAATTCTTATCTGGTGCTTTCGGTAGTCCGCATTTTA TGTCAACATTTTTATGTAAATAGCCAATCCCATGTGATATATTTTTTCAA TTTTCCTTTAGTTTTTTAAAGATTTGTTGTTTTTTTGTCTGTTTTCTTTA CCGTCAATATGACATGATTAGTAAGAAATTTGATGACTAGATAAATATAT GCTCAGAATGAGCGCTAATTCGAATTAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011345XLOC_011345Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020204-exon-sc0000350-1575043694:44247..44315TCONS_00020204-exon-sc0000350-1575043694:44247..44315Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:43562..43765TCONS_00020204-exon-sc0000350-1575043694:43562..43765Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:42125..42189TCONS_00020204-exon-sc0000350-1575043694:42125..42189Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:38458..38611TCONS_00020204-exon-sc0000350-1575043694:38458..38611Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:38131..38187TCONS_00020204-exon-sc0000350-1575043694:38131..38187Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:37733..37872TCONS_00020204-exon-sc0000350-1575043694:37733..37872Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:37404..37498TCONS_00020204-exon-sc0000350-1575043694:37404..37498Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:36688..36849TCONS_00020204-exon-sc0000350-1575043694:36688..36849Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:36320..36456TCONS_00020204-exon-sc0000350-1575043694:36320..36456Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:35793..36005TCONS_00020204-exon-sc0000350-1575043694:35793..36005Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:32910..33039TCONS_00020204-exon-sc0000350-1575043694:32910..33039Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:32647..32717TCONS_00020204-exon-sc0000350-1575043694:32647..32717Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:31825..31928TCONS_00020204-exon-sc0000350-1575043694:31825..31928Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:31365..31526TCONS_00020204-exon-sc0000350-1575043694:31365..31526Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1575043694:29785..30983TCONS_00020204-exon-sc0000350-1575043694:29785..30983Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:44247..44315TCONS_00020204-exon-sc0000350-1510915933:44247..44315Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:43562..43765TCONS_00020204-exon-sc0000350-1510915933:43562..43765Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:42125..42189TCONS_00020204-exon-sc0000350-1510915933:42125..42189Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:38458..38611TCONS_00020204-exon-sc0000350-1510915933:38458..38611Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:38131..38187TCONS_00020204-exon-sc0000350-1510915933:38131..38187Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:37733..37872TCONS_00020204-exon-sc0000350-1510915933:37733..37872Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:37404..37498TCONS_00020204-exon-sc0000350-1510915933:37404..37498Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:36688..36849TCONS_00020204-exon-sc0000350-1510915933:36688..36849Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:36320..36456TCONS_00020204-exon-sc0000350-1510915933:36320..36456Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:35793..36005TCONS_00020204-exon-sc0000350-1510915933:35793..36005Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:32910..33039TCONS_00020204-exon-sc0000350-1510915933:32910..33039Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:32647..32717TCONS_00020204-exon-sc0000350-1510915933:32647..32717Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:31825..31928TCONS_00020204-exon-sc0000350-1510915933:31825..31928Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:31365..31526TCONS_00020204-exon-sc0000350-1510915933:31365..31526Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1510915933:29785..30983TCONS_00020204-exon-sc0000350-1510915933:29785..30983Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:44247..44315TCONS_00020204-exon-sc0000350-1491911889:44247..44315Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:43562..43765TCONS_00020204-exon-sc0000350-1491911889:43562..43765Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:42125..42189TCONS_00020204-exon-sc0000350-1491911889:42125..42189Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:38458..38611TCONS_00020204-exon-sc0000350-1491911889:38458..38611Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:38131..38187TCONS_00020204-exon-sc0000350-1491911889:38131..38187Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:37733..37872TCONS_00020204-exon-sc0000350-1491911889:37733..37872Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:37404..37498TCONS_00020204-exon-sc0000350-1491911889:37404..37498Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:36688..36849TCONS_00020204-exon-sc0000350-1491911889:36688..36849Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:36320..36456TCONS_00020204-exon-sc0000350-1491911889:36320..36456Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:35793..36005TCONS_00020204-exon-sc0000350-1491911889:35793..36005Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:32910..33039TCONS_00020204-exon-sc0000350-1491911889:32910..33039Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:32647..32717TCONS_00020204-exon-sc0000350-1491911889:32647..32717Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:31825..31928TCONS_00020204-exon-sc0000350-1491911889:31825..31928Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:31365..31526TCONS_00020204-exon-sc0000350-1491911889:31365..31526Clytia hemisphaericaexon
TCONS_00020204-exon-sc0000350-1491911889:29785..30983TCONS_00020204-exon-sc0000350-1491911889:29785..30983Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:29785..44315 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.89697 1.22835 2.33416 0.237699 0.00409575 3.96381e-05 1.49725 0.21637 3.55128 2.20354 0.02246 1.25918 0.589187 0.0832365 1.09391 0.00417893 0.0434037 0.0391728 0.00118866 0.315935 1.66694e-05 0.000606108 0.168037 0.00266701 0.0557415 0.967132 0.543794 4.94279 1.07832 2.81382
Blast
BLAST of TCONS_00020204 vs. Swiss-Prot (Human)
Match: M3K3 (Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 1.884e-84
Identity = 146/266 (54.89%), Postives = 185/266 (69.55%), Query Frame = 1
Query: 1042 WTKIRQIGSGAFGTVYLCRDLTTGKELAMKCVETGSVNPAAMQEVEILHREINLYKTLKHQRIVCYYGSIQD--TKSLSIFMEYMEGGSLHERISRSGAMSEDDVRKYSRQMLEGLDYLHNNHIIHRDVKGANILLDKNDNCKLADFGSSRQIKTI-RSKTGCKSVHGTPYWMSPEVINGQGYRCKADIWSLGCTVVEMLTTKPPWFHLEPVAALFKIATQPTKPQL------QGSSLMCIKFVELCLEKDSNVRPSALELLRHQF 1812
            W + + +G GAFG VYLC D+ TG+ELA K V+    +P   +EV  L  EI L K L+H+RIV YYG ++D   K+L+IFMEYM GGS+ +++   GA++E   RKY+RQ+LEG+ YLH+N I+HRD+KGANIL D   N KL DFG+S++++TI  S TG +SV GTPYWMSPEVI+G+GY  KAD+WSLGCTVVEMLT KPPW   E +AA+FKIATQPT PQL       G   +   FVE      +  RPSA ELL H F
Sbjct:  362 WRRGKLLGQGAFGRVYLCYDVDTGRELASKQVQFDPDSPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGMRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHGRDFLRRIFVE------ARQRPSAEELLTHHF 621          
The following BLAST results are available for this feature:
BLAST of TCONS_00020204 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
M3K31.884e-8454.89Mitogen-activated protein kinase kinase kinase 3 O... [more]
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