TCONS_00020224 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020224
Unique NameTCONS_00020224
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4221

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020224 ID=TCONS_00020224|Name=TCONS_00020224|organism=Clytia hemisphaerica|type=transcript|length=4221bp
TAGAAAGTACATGTCTTTCACGAAAACGAACTGATTGATTTGTGTTGATT
TTATGTTTTTGCGGGCTTTTTGTCCGTTTGTCATTTTTTCTTACCATTCA
TTTTGTGGTGAAGGATTGCTTTTCCGTTGGCTGTCTATCGGTGACAACAT
TTCTATATTTATAATATTGCTGAGGAAAGGACTCGCGTGGACCACCAATT
TTTACTCGTtccaatttttattattgttgttgATGAACCGAAGCTCGTAA
GCGGAATCAAAGAAGAGGCGTTATTAGAAAACAAAACAGTGATTTCATTA
AAACGAAGATTAAATGATAATTTAGTGAACCTTCCAACGGATGATTAGAG
ATTTATGTTGTTTTGTTGTGGATATCAATCGTTCAAATTGAATCCTGTTt
atttaagttttgaaaaaggATATTGTGTCATTTCTCATCTCTCTCTTACT
CACTATTCATCCGTCGTGTATTTTAGTACGAAATTCAGTGAACTTTTCAT
TGTCACTACACTTCAAGTATAGATTTAACACGGAAAATACCTTTCTTGTG
CACattgaacattttttgtttgtggAATCGAGTTTGAGGAGACTTTTGGC
TTGTGTTGGACTTttgaaaagataaattttaCTGCGTGACATTATTTCAT
GGTCGTAATACGTTCAAGATGACGTTACTCGATCAACTCTGGGAAGTTCT
CCAATCAAGTTCCATAGCTGAAGTGATTGAAGACCCGGTCAAGCCGACCT
TGATTCAACAAGAACTTGAATGCTTGAACGAAGAAATCATCAAGAATCTG
TTAGACGAACAAGATGACATCCTCTTAAAATCCTCATCCTCGTCAACAAA
CTCTACCGCTTCGCTTGGTGTACCTTCTGCATCGACGGCGTCATCGCAGC
GATCGCTGAATGATACGCCAACGTACGGCAGTTCTGACGGTGAAGCATTT
ACCGGCACTTTCTACAACGGCTCCATGATTTATTCACCCGCACAAACGAT
CGAGGGGTCAGTTTCCCCGCCATCCAACCGACGTTTCCCGCCCATGATGG
AAGCGTTAAAACTTACAGATCGATTTGACGCCCCACACACGCCACTCACT
AACGGGCACACTTTACCGCGCAGCCACAGGCGGACACGAACCACATCGAG
CGGCAGTTCAATAAGCGATGATGGTGCACTTTCGTCGCCTACTTCACCTT
TCGGTCGCGGCACTTTCGGCAGACGATTCAGAAGCACTGGAAGTAGTACG
TCCTCGATCTCCTCGACGAGCGACTTATTTCAAGAAGTGTTGAGATACCC
GGCCGTGAAATTCGATAAAGACACGGTTGACTTGTGGTATCGACCAAATA
TCACACGAGATGAAGCAACAAGCTTACTTCGAGACGCAGAGCCAGGAAGT
TTCTTGGTACGAGATAGTCAAACCTATGATGGAGCTTTCGGATTAGCTGT
GAAAGTGGATTCGCCACCTGCCAGTGTCCTGAAACAAGTCGATGGAGATG
TTTCGAAAATCGATTTAGAGAACGAACTGATACGTCACTTTCTTATCGAA
CCTTCGAAGAAAGGAGTGCGCTTGAAGGGAAGCAACGAAGAACCAACTTT
CCCTAGCCTAGTTGCCCTCATCTATCAACATTCCATCACTAAGATGGCCC
TCCCAATCACTCTTCTTATACCTTACAAAGACTCAGTTGACGGTGGCAAC
CCTGCAGACAACCGACTGTCAAAACTCAGCGAAACACAATTACTGGTCAA
AGGAGCAGCATGTGATTTATTATACCTGGGCGGTGTGAAGGTGGACAAGC
TAACGGGTGATGGAGCTGTCCAGTACGCCATGAACAAGGTGGCATCACTT
TCCACCCAATTAAAGACTACAATCGTTAACATCAAAGTCAACCAAGATGG
TATCACCCTCACCGATAACAATCGAAGGATGTTTTTCCGGCAACATTTCC
AGATGGCGAATGTCCTACATTGTGGAGTGGATCCAAAATCACGACAAGTT
AATTTGAAGACATTCGCGAATCGTGAAGACAAAGATGTCGGTTGTTTCGG
CTTTGTGGTAGAGAATGAAAGGAAGACAGAACATCAATGTTACATGTTCG
CTGAACTGGAGCAAGATCAACCAGCTTCGGCCGTCATCAATTTCATACAT
AAAGCCATGCGGTACGCTCGTGTATAAACTTTAATGGTGGTGTTGGATTA
TGTTTCAGTTGAGAAGCAAACGTAATGGAGAAAAATGGTTCCTATTCCAC
ATGAGTAGCGTTCGATACGTAGTTTGGCTCAACGGTAGAAGAGCACGCGT
TCTCAGACCAGATGTAGAATTCGGGAAACCTATATAATACAATCATGTTA
GaactgtaaaataaaaaaaaatcatctaaCGAAAAACAAATCTGCTGTGG
TAACAAAATAAGCATAAGCTAAACAAAGACATATAAAAGCAAATTTAATT
TCGAAGACAAAAGATGGAAGATGTTTTATTGGTAAAAtacagactggtct
gtaaattatatttatacactttttttatttacttactGTCATGGTTTCGG
TGACAGCATGCAGGGATTTCCCGAGCTGTTAATTAAAATATACATTTAAT
TGTAAGCATTTTACTGTACAAAAAATTATTCACTCTCAGAGGGTCAACGA
TATAGGTTGGTTCAAcgctcaaaattttcaaagacaaccTTTCAGAACAT
TTTGCTACTCAGTACTCAAATACTTGTTTTTTacaagcataacgtttata
agcatacgtaGGCTCACTATTTGGTACccaaacaatggctctattgaaCA
ATCGAATGCTAATCACATTGCGAGCCTGGTATAGGTGCAGACACTTgctc
ataaaaaaacatgtaatatcGAATTCAAACTGGTGTCTCTAagagaaaaa
gtaaatttttgttttgaagaattttcataCTGTTGGCTTCTTGGCTACAA
TACATGGGAACTTGATTTGATTAAATAAAAAGCAATTTGTTATACTTTGT
AATATTATCGcgaaatatatttgaaaatattccaaTGTTTTTTCTACGTT
TTCTAAGATATATAGTTTTACAATATTCCTTCTTTgttatttaaaaagat
aaacacCCTTTATTATGTAAATAGATCTTATcttaaaaaatctataaaat
taaCATCTTCTGACTTTATATCCTAAACCTCGAATAAAAGGTTGCTTTCT
GATGCAGATCAATATGATAATTCTAATTCGCAATGATGGACTNATGATCT
GGTCGAATGTCTTCTGACTTTACATCCTCAACCTCGAATAAAATGTTGCT
TTCTGATGCAGATCAATATGATAATTCTAATTCGCAATGATGGACTTATT
GGTATACTTAAAAAGAgctaaaaacagtaaaaaaggcctttaaaaaatgt
acaaaatctAATCAGAGgataattatcaaaataaataatttttcaagttC
TATAATAAGATATTTTAGGTGTGACTCGTCTACATCTTGAATTGAGTTTC
ATCTATAAGAAGTATGTAAAAAACATTGTTGAATCTCATAACTTGGCACT
GCTTGGCAATGTACCCATTTAATAGCATATAGTCATGCACAAcgttaaaa
ggaaaaaaatcccaaaaacaCAGCAAGCAGCAaactcaaattttaaagct
tttatcACCTTTCTCCAGCCTACATAAAAAAGCATGCAGGAAGGAGCCTT
GTCAAATCGCAAAAATTTTCTGTATGTTTTGTACGCCATcactcaaaatt
ttttaaactcttATATTAGGCCTTCTTTCAACATTTAAAATCTTACATTT
TGATGGAAAATGCCTTTTTTCTCTGTGAGCTGTATCGTCTGGTTTAAAAG
CTGTTAAGCGATCAGTTTTATTTTCTGCCAAGTCTGATTTGAAAACCTTA
CTATCAAATGCATTCTTGCAATGTTTTCGTTCAGCCCGAGTCCAATCTTG
ACTTGCAATTCTTTCGACAGTGCACCAAGATTCCTTGTCCATATCTATTT
CCTATTCTAAATGTCTGCAaaataagaagataaaaaatttcccTTTCAAT
CACAATACATATATGAACAAGAGATATATTTACTATGTTTAAAGATTCTA
CTTAAATCTAGAAAANTTACATATATGAACAGAGATATATTTACTATGTT
TAAAGATTCTACTTAAATCTAGAAAAGAGCAGTCAACTTTTCTTTCGACT
TTTCAACAGTCTGAtactttg
Run BLAST on NCBI

transcript from alignment at sc0000350:254040..264166-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020224 ID=TCONS_00020224|Name=TCONS_00020224|organism=Clytia hemisphaerica|type=transcript|length=10127bp|location=Sequence derived from alignment at sc0000350:254040..264166- (Clytia hemisphaerica)
TAGAAAGTACATGTCTTTCACGAAAACGAACTGATTGATTTGTGTTGATT
TTATGTTTTTGCGGGCTTTTTGTCCGTTTGTCATTTTTTCTTACCATTCA
TTTTGTGGTGAAGGATTGCTTTTCCGTTGGCTGTCTATCGGTGACAACAT
TTCTATATTTATAATATTGCTGAGGAAAGGACTCGCGTGGACCACCAATT
TTTACTCGTTCCAATTTTTATTATTGTTGTTGATGAACCGAAGCTCGTAA
GCGGAATCAAAGAAGAGGCGTTATTAGAAAACAAAACAGTGATTTCATTA
AAACGAAGATTAAATGATAATTTAGTGAACCTTCCAACGGATGATTAGAG
ATTTATGTTGTTTTGTTGTGGATATCAATCGTTCAAATTGAATCCTGTTT
ATTTAAGTTTTGAAAAAGGATATTGTGTCATTTCTCATCTCTCTCTTACT
CACTATTCATCCGTCGTGTATTTTAGTACGAAATTCAGTGAACTTTTCAT
TGTCACTACACTTCAAGTATAGATTTAACACGGAAAATACCTTTCTTGTG
CACATTGAACATTTTTTGTTTGTGGAATCGAGTTTGAGGAGACTTTTGGC
TTGTGTTGGACTTTTGAAAAGATAAATTTTACTGCGTGACATTATTTCAT
GGTCGTAATACGTTCAAGATGACGTTACTCGATCAACTCTGGGAAGTTCT
CCAATCAAGGTGCTCATTAATGGAGTTTAAACTATGAGTTTATGTCTGAG
ATTTGCGGAGAAATCCTCTGCCCATTACTCTGTAAAAGTTTGGAAAGGAA
TGTTGCGAGCATTTCCGAGAAATTCAGTTGATATCGCCAACGATTCTTTT
TTTCTACGATTGCCTTTGTCGTCGATTTTGGAAGATAATTTTTCAATCCT
GAAAGGCTTCGTAAGAGAGAAGCAACCGATTCGAATCTACTGGGATAGGA
AAACCGGGATGTCCTCGAGTTGTGAGACTGGCTCAAAAATCAGATTTAAA
AAATGTTTAAGCTTTCAGTGATGAAGAATATCTTCAATACCTTACGTAGT
AATATTCGCTTTTGTGCCCCTGTAATTAGTCTCCCGTTAAACCCTTGTTA
ACCCATTTCTGTTTTATTTCGTACACAGTTCCATAGCTGAAGTGATTGAA
GACCCGGTCAAGCCGACCTTGATTCAACAAGAACTTGAATGCTTGAACGA
AGAAATCATCAAGAATCTGTTAGACGAACAAGATGACATCCTCTTAAAAT
CCTCATCCTCGTCAACAAACTCTACCGCTTCGCTTGGTGTACCTTCTGCA
TCGACGGCGTCATCGCAGCGATCGCTGAATGATACGCCAACGTACGGCAG
TTCTGACGGTGAAGCATTTACCGGCACTTTCTACAACGGCTCCATGATGT
AAGAATGCTTTCACTTTGTTTGTTTGTTACTCCTTGTAAAGAGTTACCCA
TTTCAAAGTGCCTGCAATTCGTAAGGATTAATCAAAACTGCCTATAAGAT
AACGACTTCTTCTAAAACATGATTTTTGTGTGCAACCAACAGTTTTGATT
CCTCATGATTTATTGTGATCGTAGCATGAAATTTTAGATAGGCTATAATA
GCTGTTTGTATGCTTCCCATCGCCATAATCGAGCAAAAAAAGTGCATAGT
TTGATATTTCATAAAAGTATTTGAAGCTTAGAATGTAGCTAGTGTAGACA
AGAATCAGGGCTTTCTTTGTGACGGTTTTTCTTGTATTGATATTTTGAAA
CTGTATAACTGGTTTTCCAAGGTGATGAAATCCACCAATTTGACATTTGA
AACTTATCTTGAAAGTCATATTTTCGAAAGTTGATTTTCAATACGAATTA
AAATATTTTGAAAACTAGATATAAATTTATCGCTAAATTTAGAAATCACT
CAGCAAGTTTTGTTATAAAAATAACTTTTTTCATCGTTAAGATTTGCTTC
ATGTGTCAACTCAATATATAAAGTCGACAAGATAAGATTCTTTCCACTAT
TAACATCACGTTTTAAGTTTGGTGTGAAGTGATTAGATTTGGACGTGATT
CTTACTCCTGGCTCCTGTCATTATTGAATATACAGTAATCAATTTTTTGT
TCTTCATTCCAAGAAACGAAGTCAGCTTTACGTCACTCTATAATTACATT
TATCGTAATTATTGAAATCAAAAACATTTCGGATATCTTTTGTTCCATCT
TCATCTACTCAGAAAGTAAAAAAGTTTCTCACAGAATTTATTGAAGGTAG
ATTTAATAGTGAAAACACCTGTAAAGATGCCAGGTCTTTATAGAAATCAA
AGAAAAGGCCAACACGGTTCTCTACAAGACAGGTAGTCATTGAGTTCTGA
AATCAATTTTGACATACGCAAAATTTCTTAACGGTATCTTTTGGCTTACT
AAACTAGATAAAGTAACAGTAAGGGATGATGAATGAAAAGCTTTTGTGTG
TAAATCAACTTATAAACTAACTAACTTGACTATTCAATTGGAATGTTTGG
ATGAATAAACGAGTTAGCAGGAGATCGTTTTGATGTTATTTCCTCGTTCT
CTTGTTCAAGTCAATCTGAAAGAGAGCGGAAATTCTCCACATCGATTGGA
TTTGAATCTCAACTTTAAGAAATTTCTTTAATTGATTTAACGCTGTCTTT
CACTTTGGCCCTTGTTGAAAGACAATTCTGTAACGGCTTTTAGGTGATGT
GTGTGTATGGTTTTGTGTTTTTGAAGAGTTCTCGTTTAGCAGACGTTAGT
TTAGCCTCTTTGTCATTGTTGGAAAAGTGTTATGCGAGGGATGGTGTTTT
CAGCTAATTTTGATAATTGAGATTGACGATATCTGTGTCGTTCGAGTTCC
ATGTATTTTGATTTGATTACTGTTACTTGGTATCCATGATTTGACTGCTG
GTTCAACTACATTTAAGCCTTTAGAATCCAAAGAAAGTCTGATATTTTGA
ACAACAGTGTCACCGCTATAACTAAAATGTTAACGAAGTTTTTTCAAATG
TTTTCTTTCAGTTATTCACCCGCACAAACGATCGAGGGGTCAGTTTCCCC
GCCATCCAACCGACGTTTCCCGCCCATGATGGAAGCGTTAAAACTTACAG
ATCGATTTGACGCCCCACACACGCCACTCACTAACGGGCACACTTTACCG
CGCAGCCACAGGCGGACACGAACCACATCGAGCGGCAGTTCAATAAGCGA
TGATGGTGCACTTTCGTCGCCTACTTCACCTTTCGGTCGCGGCACTTTCG
GCAGACGATTCAGAAGCACTGGAAGTAGTACGTCCTCGATCTCCTCGACG
AGCGGTAAGTGTAAAAAGAGTCTTATCTTTTCATATTTGGGTCAGATATA
AACTAGTAGAATAATGGTGAAATACCCTTAGATTCTCCCATTATTTTTTC
CACTTTTTAAAGAAGGAGACAATTAATCGCTTTCCATATCATAATTTCAC
TGTTTATGTCATACTTGTCGGCGAGTGTCGGTTTGATGACGTCATGCTTT
TGATCAATTAGGTCAGTCAATGTCGGTCGTTTTAATCTCATTGCGGGTGT
ATTCAAGACGTTAATGAACGGGGCAAACTATAATGGATCGGGCACAAATC
TTTAATGGGTTTAAAAGGTGACTTAGGCTTAAACTCTAGCTGACGTTAGC
TAATTGTTTAAGGGCTGGATTGTTTTTGATCATTTGAGCTCTTTAAATTG
ATATGTTATCAAACGTCGTTCACTCTTCCATTGTTTGCTGTAAGCCTCAC
AAAACAACAACAAAATGTATAGTCTAAAATTTTAAATTATGTTCATCTTC
TCTCAATATGATTATATCCCATTAATTAAGAACCAAGTTATGTTACAAAT
TTTTGAAAGAAAGCTTTCAGGGAAGTACAAGTTTACTTTTTATTACACTT
TTTTTATATAAGAACAATAAGGCTCAAAATCGCCAAAAAATAAGAACAAC
GCTGAGCCTGAAATTACTCAAATTCAAGTAATTTAGAGGTGAAAGTCGTA
AAAATTGGGTATAACGCCTAGAATACCTCAATTACACCTTATAAATAAGA
ACAGGATAAGAACAATTTGAAGCTCAAAGTGCCAAAAGAATAAGAACAAC
AGAGCCTCAGAAAAATTTTACTGATTCTTATAAAAAAAGTGTATGCAGTC
AAAACGGTCTTTATCAGGAAGACAAAGATTTGAGTCGAAATCAACGACAT
AAAAACTTGTTATTTGCACTCAGACAAAGCTTGAGCTAATCCGGAAAAGG
ACTTAAATGCTTTCAGTCTAGTATTTTCCCAGGCTAAATGATTAGTTAAG
TCTCATTAAGAAGTCTCTTAAACTTTCAAATGTTTGTATGAGCTTAGGGA
GGAGTTTTTGGTCATCTTTTTCTGAAAATTATTGTCTTGTTTGGAAAAGT
CATTTCTTGTCTTATTTCCTTGTTACAAATCCAATATGTTGTCTCTTTTG
TGTCACTTTGTTAGGTGTCAATATTAGAAGTTCAGCTTGTTCCCTTAATT
TCCTGATTTCATCAACCTAAATAAACTTTAGGCCTTGAGATTAAACGTTT
GACCAGAATTTAGCTTGATATGACGGGAGAAGCGGAAAAAAGGTTAACAA
TATGAAAGAACTAGATCCTGTTTAGGATATTAGAAACAAACTACCAGCTC
GCAGTTCTATAAATCGGTTAAAAAATTCATCAGAACTTAAACATTAGATT
TCCTCATTCATTACAGACTTATTTCAAGAAGTGTTGAGATACCCGGCCGT
GAAATTCGATAAAGACACGGTTGACTTGTGGTATCGACCAAATATCACAC
GAGATGAAGGTAAGTTCTTTTGATTGATATTCTCATAATAAACAAACAGG
ATCTTTCAAAGCTTTATGAAGAAAAAATGCTACAGGATCGTACCAAAGTT
CTTTCGCATAAGCTTTAAAACGTTTCCTTTGTACCTCAATAACTTTTTTG
GATTTCCTGGATAACCATTCGGCTAGCTTTATTATCCCTATACTGATTCT
TGCAGCATAGGGAGACATTAAGTTCAACAATTTAACGGTGAGTATACCAA
TCATTTAAGACAATGAATGGACCCGGTGAGCTGCTTGAAGTGAGAGATTG
GGCGACGAAAATTTTTTCACATTCTTCTAAACACGATAAGATGATATTTA
AATGGGTCAGATTAGGATTTTGACTTTGACAAATACATAGCCTGCAAAAA
AGTTGACGGGGCCCATAATTTTAAAGATGGTATTGTCGGTCAAAAAGTTG
AGCTCCTCGCTCCCTAATATCGCTTGAATCTTCCTCAGCACACGATAAAA
CACGATAAATATAATTCTTCTCATCTTTGTAGCAACAAGCTTACTTCGAG
ACGCAGAGCCAGGAAGTTTCTTGGTACGAGATAGTCAAACCTATGATGGA
GCTTTCGGATTAGCTGTGAAAGTGGATTCGCCACCTGCCAGTGTCCTGAA
ACAAGTCGATGGAGATGTTTGTAAGTTTAACATTTTGGATTTGTTTAAGA
TGTATAAGTGAATTTCATATTCACATTCACCCTATGATTACTATGACGAA
AATGAGTTGAACTATTTGATAATGTCAGTGATAGACGCGAAACTTGTTTG
TAGAGTCGTCGCTCTATTTTAATGATCATTCTTCCTCCTCTTTAATGATC
ATTCATCTTAATGATCACCTTCCCTATATTCTTTGAAGAAAACTTTTCCA
ATATTCTCTGTTTTAGCGAAAATCGATTTAGAGAACGAACTGATACGTCA
CTTTCTTATCGAACCTTCGAAGAAAGGAGTGCGCTTGAAGGGAAGCAACG
AAGAACCAACTTTCCCTAGCCTAGTTGCCCTCATCTATCAACATTCCATC
ACTAAGATGGCCCTCCCAATCACTCTTCTTATACCTTACAAAGGTAAGCT
TTGATTAACACTTTCATTGAAAGTTTATGGAGTCATCTTCTATTAAAACC
TTTCAAAGAATTGATTCCCTTAACATGAAACTTAGACGAGAACCTAAAAA
CGTTCCTGGCTTGAATTAATTTCCAAAGGCATCAATTTTTTATATGTTAT
GGTTAAACAGCGATAAGCCATAATCGTTGAGGCAGACTTTGATTACCCTG
TGGGTCATCTATTTCGTTATGAATCTAACGACAAAGTAATGGTGTAACTT
CTTATCTTCATATTGATAGACTCAGTTGACGGTGGCAACCCTGCAGACAA
CCGACTGTCAAAACTCAGCGAAACACAATTACTGGTCAAAGGAGCAGCAT
GTGATTTATTATACCTGGGCGGTGTGAAGGTGGACAAGCTAACGGGTGAT
GGAGCTGTCCAGTACGCCATGAACAAGGTGGCATCACTTTCCACCCAATT
AAAGACTACAATCGTTAACATCAAAGTCAACCAAGATGGTATCACCCTCA
CCGATAACAATCGAAGGTTTGTCTCTATTTTCATACAAACATATATCAGT
CTAATCGAAGCTGAGAATATGAAAAAAGCTCCGTTCTTGTAATTAGAGAA
TAGACTTCGACTTGACTGTCCGAAAATGGCGGACAATTTAAAAAAGCAAG
CACGCGAACAAGAGATCTTTAGATCTCAATTAAAGTATGTTTGGCATAAC
ATTTAAAATCCTGCTCCTGTTTCCAGGATGTTTTTCCGGCAACATTTCCA
GATGGCGAATGTCCTACATTGTGGAGTGGATCCAAAATCACGACAAGTTA
ATTTGAAGACATTCGCGAATCGTGAAGACAAAGATGTCGGGTAAGAGTCT
ACTTTTTGTAGATTATATAGCTTAATTCTTTCGTTTACATGTTTGTTTTA
TAAGCATTGCACGTATAAGCATATCTAGGCTCAGATATTAGTAGGGGGAA
ATTTGTTCGTTTTTTTGAGGTCGCTCGATTTTTTTAGTCAAAGCACTTGT
TATACATTTTTGGAAAGCTAAGGGGTAGGGGAATCAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAAGTTATTTTGATTCCCCTA
CCCTTTAGCTTTCCAAAAATGTATAACAAGTGCTTTGACTAAAAAAATCG
AGCGATTTTACAAATTTCCCCCTACTATATGTCAAAAATCTAATCATACA
CAGTAATGATTTTGCCCTGTTTTTGGCTGAAATTTTACGGTTTCTCTGAA
TATTCCTATGATTTTTGCATGAGGAATATAAGCACCCTTATAAGCATTTT
TTAGCCTTGTCAAGCCCTCGAACTAAGCACCTCCGAGCCTGTTTTCTATA
TTTATAAAAAACATGTATCTGGATATCTTGGTTTTATCGGAGCTCGTTTA
AAGCTTTTATAGAGTAGGGTTTAGATAAGGGTTTCGAATTCAAGATTTAC
AACCCATACCGTCATATTTGAACGTTCATTTTTGTTTCCCTTTTTAGTTG
TTTCGGCTTTGTGGTAGAGAATGAAAGGAAGACAGAACATCAATGTTACA
TGTTCGCTGAACTGGAGCAAGATCAACCAGCTTCGGCCGTCATCAATTTC
ATACATAAAGCCATGCGGTACGCTCGTGTATAAACTTTAATGGTGGTGTT
GGATTATGTTTCAGTTGAGAAGCAAACGTAATGGAGAAAAATGGTTCCTA
TTCCACATGAGTAGCGTTCGATACGTAGTTTGGCTCAACGGTAGAAGAGC
ACGCGTTCTCAGACCAGATGTAGAATTCGGGAAACCTATATAATACAATC
ATGTTAGAACTGTAAAATAAAAAAAAATCATCTAACGAAAAACAAATCTG
CTGTGGTAACAAAATAAGCATAAGCTAAACAAAGACATATAAAAGCAAAT
TTAATTTCGAAGACAAAAGATGGAAGATGTTTTATTGGTAAAATACAGAC
TGGTCTGTAAATTATATTTATACACTTTTTTTATTTACTTACTGTCATGG
TTTCGGTGACAGCATGCAGGGATTTCCCGAGCTGTTAATTAAAATATACA
TTTAATTGTAAGCATTTTACTGTACAAAAAATTATTCACTCTCAGAGGGT
CAACGATATAGGTTGGTTCAACGCTCAAAATTTTCAAAGACAACCTTTCA
GAACATTTTGCTACTCAGTACTCAAATACTTGTTTTTTACAAGCATAACG
TTTATAAGCATACGTAGGCTCACTATTTGGTACCCAAACAATGGCTCTAT
TGAACAATCGAATGCTAATCACATTGCGAGCCTGGTATAGGTGCAGACAC
TTGCTCATAAAAAAACATGTAATATCGAATTCAAACTGGTGTCTCTAAGA
GAAAAAGTAAATTTTTGTTTTGAAGAATTTTCATACTGTTGGCTTCTTGG
CTACAATACATGGGAACTTGATTTGATTAAATAAAAAGCAATTTGTTATA
CTTTGTAATATTATCGCGAAATATATTTGAAAATATTCCAATGTTTTTTC
TACGTTTTCTAAGATATATAGTTTTACAATATTCCTTCTTTGTTATTTAA
AAAGATAAACACCCTTTATTATGTAAATAGATCTTATCTTAAAAAATCTA
TAAAATTAACATCTTCTGACTTTATATCCTAAACCTCGAATAAAAGGTTG
CTTTCTGATGCAGATCAATATGATAATTCTAATTCGCAATGATGGACTNA
TGATCTGGTCGAATGTCTTCTGACTTTACATCCTCAACCTCGAATAAAAT
GTTGCTTTCTGATGCAGATCAATATGATAATTCTAATTCGCAATGATGGA
CTTATTGGTATACTTAAAAAGAGCTAAAAACAGTAAAAAAGGCCTTTAAA
AAATGTACAAAATCTAATCAGAGGATAATTATCAAAATAAATAATTTTTC
AAGTTCTATAATAAGATATTTTAGGTGTGACTCGTCTACATCTTGAATTG
AGTTTCATCTATAAGAAGTATGTAAAAAACATTGTTGAATCTCATAACTT
GGCACTGCTTGGCAATGTACCCATTTAATAGCATATAGTCATGCACAACG
TTAAAAGGAAAAAAATCCCAAAAACACAGCAAGCAGCAAACTCAAATTTT
AAAGCTTTTATCACCTTTCTCCAGCCTACATAAAAAAGCATGCAGGAAGG
AGCCTTGTCAAATCGCAAAAATTTTCTGTATGTTTTGTACGCCATCACTC
AAAATTTTTTAAACTCTTATATTAGGCCTTCTTTCAACATTTAAAATCTT
ACATTTTGATGGAAAATGCCTTTTTTCTCTGTGAGCTGTATCGTCTGGTT
TAAAAGCTGTTAAGCGATCAGTTTTATTTTCTGCCAAGTCTGATTTGAAA
ACCTTACTATCAAATGCATTCTTGCAATGTTTTCGTTCAGCCCGAGTCCA
ATCTTGACTTGCAATTCTTTCGACAGTGCACCAAGATTCCTTGTCCATAT
CTATTTCCTATTCTAAATGTCTGCAAAATAAGAAGATAAAAAATTTCCCT
TTCAATCACAATACATATATGAACAAGAGATATATTTACTATGTTTAAAG
ATTCTACTTAAATCTAGAAAANTTACATATATGAACAGAGATATATTTAC
TATGTTTAAAGATTCTACTTAAATCTAGAAAAGAGCAGTCAACTTTTCTT
TCGACTTTTCAACAGTCTGATACTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011353XLOC_011353Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020224-exon-sc0000350-1575043694:263458..264166TCONS_00020224-exon-sc0000350-1575043694:263458..264166Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1575043694:262769..263038TCONS_00020224-exon-sc0000350-1575043694:262769..263038Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1575043694:260863..261155TCONS_00020224-exon-sc0000350-1575043694:260863..261155Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1575043694:259358..259450TCONS_00020224-exon-sc0000350-1575043694:259358..259450Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1575043694:258697..258834TCONS_00020224-exon-sc0000350-1575043694:258697..258834Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1575043694:258274..258450TCONS_00020224-exon-sc0000350-1575043694:258274..258450Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1575043694:257751..257997TCONS_00020224-exon-sc0000350-1575043694:257751..257997Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1575043694:257427..257540TCONS_00020224-exon-sc0000350-1575043694:257427..257540Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1575043694:254040..256219TCONS_00020224-exon-sc0000350-1575043694:254040..256219Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1510915933:263458..264166TCONS_00020224-exon-sc0000350-1510915933:263458..264166Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1510915933:262769..263038TCONS_00020224-exon-sc0000350-1510915933:262769..263038Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1510915933:260863..261155TCONS_00020224-exon-sc0000350-1510915933:260863..261155Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1510915933:259358..259450TCONS_00020224-exon-sc0000350-1510915933:259358..259450Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1510915933:258697..258834TCONS_00020224-exon-sc0000350-1510915933:258697..258834Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1510915933:258274..258450TCONS_00020224-exon-sc0000350-1510915933:258274..258450Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1510915933:257751..257997TCONS_00020224-exon-sc0000350-1510915933:257751..257997Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1510915933:257427..257540TCONS_00020224-exon-sc0000350-1510915933:257427..257540Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1510915933:254040..256219TCONS_00020224-exon-sc0000350-1510915933:254040..256219Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1491911889:263458..264166TCONS_00020224-exon-sc0000350-1491911889:263458..264166Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1491911889:262769..263038TCONS_00020224-exon-sc0000350-1491911889:262769..263038Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1491911889:260863..261155TCONS_00020224-exon-sc0000350-1491911889:260863..261155Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1491911889:259358..259450TCONS_00020224-exon-sc0000350-1491911889:259358..259450Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1491911889:258697..258834TCONS_00020224-exon-sc0000350-1491911889:258697..258834Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1491911889:258274..258450TCONS_00020224-exon-sc0000350-1491911889:258274..258450Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1491911889:257751..257997TCONS_00020224-exon-sc0000350-1491911889:257751..257997Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1491911889:257427..257540TCONS_00020224-exon-sc0000350-1491911889:257427..257540Clytia hemisphaericaexon
TCONS_00020224-exon-sc0000350-1491911889:254040..256219TCONS_00020224-exon-sc0000350-1491911889:254040..256219Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:254040..264166 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0497556	0	0.169761	0.172712	0	0	0.156903	0	0	0.118951	0	0	1.73869	2.15007	0.282606	0.3438	2.06836	2.51288	3.19967	2.5577	0.979742	0.371946	0.26153	0.289293	0.290758	0.927595	0.587342	0.807654	0.740236	1.01894
Blast
[Close]
BLAST of TCONS_00020224 vs. Swiss-Prot (Human)
Match: TENS1 (Tensin-1 OS=Homo sapiens GN=TNS1 PE=1 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 2.542e-68
Identity = 126/286 (44.06%), Postives = 186/286 (65.03%), Query Frame = 3 
Query: 1305 VKFDKDTVDLWYRPNITRDEATSLLRDAEPGSFLVRDSQTYDGAFGLAVKVDSPPASVLKQVDGDVSKIDLENELIRHFLIEPSKKGVRLKGSNEEPTFPSLVALIYQHSITKMALPITLLIPYKDSVDGGNPADNRLSKLSETQLLVKGAACDLLYLGGVKVDKLTGDGAVQYAMNKVASLSTQLKTTIVNIKVNQDGITLTDNNRRMFFRQHFQMANVLHCGVDPKSRQVNLKTFANREDKDVGCFGFVVENE-RKTEHQCYMFAELEQDQPASAVINFIHKAM 2159
            VKF +DT   WY+P I+R++A +LL+D EPG+F++RDS ++ GA+GLA+KV SPP ++++Q      K D+ +EL+RHFLIE   +GV+LKG   EP F SL AL+YQHSI  +ALP  L+IP +D  D     D+     S   LL +GAAC++L++  V ++ LTG  A+  A ++  +       TIV+ KV+  GITLTDN R++FFR+H+ +  V  C +DP+ R+  +KT      K    FGFV   +   T++ C++FAEL+ +QPASA++NF+ K M
Sbjct: 1453 VKFVQDTSKYWYKPEISREQAIALLKDQEPGAFIIRDSHSFRGAYGLAMKVSSPPPTIMQQNK----KGDMTHELVRHFLIETGPRGVKLKGCPNEPNFGSLSALVYQHSIIPLALPCKLVIPNRDPTDESK--DSSGPANSTADLLKQGAACNVLFVNSVDMESLTGPQAISKATSETLAADPTPAATIVHFKVSAQGITLTDNQRKLFFRRHYPLNTVTFCDLDPQERKW-MKTEGGAPAK---LFGFVARKQGSTTDNACHLFAELDPNQPASAIVNFVSKVM 1728
The following BLAST results are available for this feature:
BLAST of TCONS_00020224 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENS12.542e-6844.06Tensin-1 OS=Homo sapiens GN=TNS1 PE=1 SV=2[more]
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