TCONS_00020225 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020225
Unique NameTCONS_00020225
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3558

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020225 ID=TCONS_00020225|Name=TCONS_00020225|organism=Clytia hemisphaerica|type=transcript|length=3558bp
GAATTTTTTTACTGATATGTATATTCACCGACATGGTTAGATCAAGTTCC
ATAGCTGAAGTGATTGAAGACCCGGTCAAGCCGACCTTGATTCAACAAGA
ACTTGAATGCTTGAACGAAGAAATCATCAAGAATCTGTTAGACGAACAAG
ATGACATCCTCTTAAAATCCTCATCCTCGTCAACAAACTCTACCGCTTCG
CTTGGTGTACCTTCTGCATCGACGGCGTCATCGCAGCGATCGCTGAATGA
TACGCCAACGTACGGCAGTTCTGACGGTGAAGCATTTACCGGCACTTTCT
ACAACGGCTCCATGATTTATTCACCCGCACAAACGATCGAGGGGTCAGTT
TCCCCGCCATCCAACCGACGTTTCCCGCCCATGATGGAAGCGTTAAAACT
TACAGATCGATTTGACGCCCCACACACGCCACTCACTAACGGGCACACTT
TACCGCGCAGCCACAGGCGGACACGAACCACATCGAGCGGCAGTTCAATA
AGCGATGATGGTGCACTTTCGTCGCCTACTTCACCTTTCGGTCGCGGCAC
TTTCGGCAGACGATTCAGAAGCACTGGAAGTAGTACGTCCTCGATCTCCT
CGACGAGCGACTTATTTCAAGAAGTGTTGAGATACCCGGCCGTGAAATTC
GATAAAGACACGGTTGACTTGTGGTATCGACCAAATATCACACGAGATGA
AGCAACAAGCTTACTTCGAGACGCAGAGCCAGGAAGTTTCTTGGTACGAG
ATAGTCAAACCTATGATGGAGCTTTCGGATTAGCTGTGAAAGTGGATTCG
CCACCTGCCAGTGTCCTGAAACAAGTCGATGGAGATGTTTCGAAAATCGA
TTTAGAGAACGAACTGATACGTCACTTTCTTATCGAACCTTCGAAGAAAG
GAGTGCGCTTGAAGGGAAGCAACGAAGAACCAACTTTCCCTAGCCTAGTT
GCCCTCATCTATCAACATTCCATCACTAAGATGGCCCTCCCAATCACTCT
TCTTATACCTTACAAAGACTCAGTTGACGGTGGCAACCCTGCAGACAACC
GACTGTCAAAACTCAGCGAAACACAATTACTGGTCAAAGGAGCAGCATGT
GATTTATTATACCTGGGCGGTGTGAAGGTGGACAAGCTAACGGGTGATGG
AGCTGTCCAGTACGCCATGAACAAGGTGGCATCACTTTCCACCCAATTAA
AGACTACAATCGTTAACATCAAAGTCAACCAAGATGGTATCACCCTCACC
GATAACAATCGAAGGATGTTTTTCCGGCAACATTTCCAGATGGCGAATGT
CCTACATTGTGGAGTGGATCCAAAATCACGACAAGTTAATTTGAAGACAT
TCGCGAATCGTGAAGACAAAGATGTCGGTTGTTTCGGCTTTGTGGTAGAG
AATGAAAGGAAGACAGAACATCAATGTTACATGTTCGCTGAACTGGAGCA
AGATCAACCAGCTTCGGCCGTCATCAATTTCATACATAAAGCCATGCGGT
ACGCTCGTGTATAAACTTTAATGGTGGTGTTGGATTATGTTTCAGTTGAG
AAGCAAACGTAATGGAGAAAAATGGTTCCTATTCCACATGAGTAGCGTTC
GATACGTAGTTTGGCTCAACGGTAGAAGAGCACGCGTTCTCAGACCAGAT
GTAGAATTCGGGAAACCTATATAATACAATCATGTTAGaactgtaaaata
aaaaaaaatcatctaaCGAAAAACAAATCTGCTGTGGTAACAAAATAAGC
ATAAGCTAAACAAAGACATATAAAAGCAAATTTAATTTCGAAGACAAAAG
ATGGAAGATGTTTTATTGGTAAAAtacagactggtctgtaaattatattt
atacactttttttatttacttactGTCATGGTTTCGGTGACAGCATGCAG
GGATTTCCCGAGCTGTTAATTAAAATATACATTTAATTGTAAGCATTTTA
CTGTACAAAAAATTATTCACTCTCAGAGGGTCAACGATATAGGTTGGTTC
AAcgctcaaaattttcaaagacaaccTTTCAGAACATTTTGCTACTCAGT
ACTCAAATACTTGTTTTTTacaagcataacgtttataagcatacgtaGGC
TCACTATTTGGTACccaaacaatggctctattgaaCAATCGAATGCTAAT
CACATTGCGAGCCTGGTATAGGTGCAGACACTTgctcataaaaaaacatg
taatatcGAATTCAAACTGGTGTCTCTAagagaaaaagtaaatttttgtt
ttgaagaattttcataCTGTTGGCTTCTTGGCTACAATACATGGGAACTT
GATTTGATTAAATAAAAAGCAATTTGTTATACTTTGTAATATTATCGcga
aatatatttgaaaatattccaaTGTTTTTTCTACGTTTTCTAAGATATAT
AGTTTTACAATATTCCTTCTTTgttatttaaaaagataaacacCCTTTAT
TATGTAAATAGATCTTATcttaaaaaatctataaaattaaCATCTTCTGA
CTTTATATCCTAAACCTCGAATAAAAGGTTGCTTTCTGATGCAGATCAAT
ATGATAATTCTAATTCGCAATGATGGACTNATGATCTGGTCGAATGTCTT
CTGACTTTACATCCTCAACCTCGAATAAAATGTTGCTTTCTGATGCAGAT
CAATATGATAATTCTAATTCGCAATGATGGACTTATTGGTATACTTAAAA
AGAgctaaaaacagtaaaaaaggcctttaaaaaatgtacaaaatctAATC
AGAGgataattatcaaaataaataatttttcaagttCTATAATAAGATAT
TTTAGGTGTGACTCGTCTACATCTTGAATTGAGTTTCATCTATAAGAAGT
ATGTAAAAAACATTGTTGAATCTCATAACTTGGCACTGCTTGGCAATGTA
CCCATTTAATAGCATATAGTCATGCACAAcgttaaaaggaaaaaaatccc
aaaaacaCAGCAAGCAGCAaactcaaattttaaagcttttatcACCTTTC
TCCAGCCTACATAAAAAAGCATGCAGGAAGGAGCCTTGTCAAATCGCAAA
AATTTTCTGTATGTTTTGTACGCCATcactcaaaattttttaaactcttA
TATTAGGCCTTCTTTCAACATTTAAAATCTTACATTTTGATGGAAAATGC
CTTTTTTCTCTGTGAGCTGTATCGTCTGGTTTAAAAGCTGTTAAGCGATC
AGTTTTATTTTCTGCCAAGTCTGATTTGAAAACCTTACTATCAAATGCAT
TCTTGCAATGTTTTCGTTCAGCCCGAGTCCAATCTTGACTTGCAATTCTT
TCGACAGTGCACCAAGATTCCTTGTCCATATCTATTTCCTATTCTAAATG
TCTGCAaaataagaagataaaaaatttcccTTTCAATCACAATACATATA
TGAACAAGAGATATATTTACTATGTTTAAAGATTCTACTTAAATCTAGAA
AANTTACATATATGAACAGAGATATATTTACTATGTTTAAAGATTCTACT
TAAATCTAGAAAAGAGCAGTCAACTTTTCTTTCGACTTTTCAACAGTCTG
Atactttg
Run BLAST on NCBI

transcript from alignment at sc0000350:254040..265255-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020225 ID=TCONS_00020225|Name=TCONS_00020225|organism=Clytia hemisphaerica|type=transcript|length=11216bp|location=Sequence derived from alignment at sc0000350:254040..265255- (Clytia hemisphaerica)
GAATTTTTTTACTGATATGTATATTCACCGACATGGTTAGATCAAGGTAA
GGAGTTTTCGGTGTAAAGCATACTTCTCTAAAAGGAAACCTTTTGAAATG
TCTCACGAAAACAACAGTCAAGTGTCATCTGATAGACCTTGGGTGTTCTC
TTAGATAAGATTGCTGTTCTGTGGCTGTATAGTCTGGTGGGACCTGCTGA
ACTTAAGATCGTTAACGAGCACTAAATAGTTTGACAAGTACCTGTCCTTT
TCGGTATTATGAATACGATGAACCTTGCATAAATGAACCTTATACGAAAC
AAAAGTATATCCGGAAAATGCCATTTGATCCGGATTGCTTCAATTATCCG
GACTTTCCGTATTTGAGAGAAATACAATTTATATATGGCTACTGTTGCGT
GTTATTTTTGGGATGTTTTAAAAATTGTTTTGATTACTTATAGAGGGAAA
TTAACTTGATGTTACAGAATTTGTTTTTACNCTAAAAATTGTTTTGATTA
CTTAAAGAGGGAAAGTTAACTTGATGCTACAGAATTTGCTTTTACTGTGT
TAACTTCGTGTTAATTTTCACTATAAAGATCTTCCTTCCTTTGAGAGACA
AGGCTTTATAGTCTCTATGTCACCACTGTGTTTTTCATTAGAACTTATTC
TTTCTATAAGCACTTTTTTAGAAAGTTGTAAAGAAGAAAAAGACTGGATC
TTGAGACACGGCTTTTGAAATATGTAGCCACTAATCTACAATATCTGGAG
ACTGGTTTTCTAAAATTTGTACTGAAGGAATCGTCGGGAGACTGAAAACG
AGAGTTGGACAATCAAGTGCATTTTGTGGTTGCGGGGATTGAATAAGTCA
AAGTGCTTATATAGAAATGCTAGCCAGTTGATTATTGAAGGTTGTCACCT
CAGTTTTTGTGTTGTACAGAGGACCGGTAATTCAACATCAGATGTCAACC
AATGTTCTTATTTGATGTAAATTGAATGTTTATATTCGCGCCATTCAAAA
CGTATGAAACACTACAATCAGAACTTCATACAAAAAAATCTTTCAACTAC
TTGTCAAAAACGTACAAATGTACTGATGAACTATGAGGATAGAAAGTACA
TGTCTTTCACGAAAACGAACTGATTGATTTGTGTTGATTTTATGTTTTTG
CGGGCTTTTTGTCCGTTTGTCATTTTTTCTTACCATTCATTTTGTGGTGA
AGGATTGCTTTTCCGTTGGCTGTCTATCGGTGACAACATTTCTATATTTA
TAATATTGCTGAGGAAAGGACTCGCGTGGACCACCAATTTTTACTCGTTC
CAATTTTTATTATTGTTGTTGATGAACCGAAGCTCGTAAGCGGAATCAAA
GAAGAGGCGTTATTAGAAAACAAAACAGTGATTTCATTAAAACGAAGATT
AAATGATAATTTAGTGAACCTTCCAACGGATGATTAGAGATTTATGTTGT
TTTGTTGTGGATATCAATCGTTCAAATTGAATCCTGTTTATTTAAGTTTT
GAAAAAGGATATTGTGTCATTTCTCATCTCTCTCTTACTCACTATTCATC
CGTCGTGTATTTTAGTACGAAATTCAGTGAACTTTTCATTGTCACTACAC
TTCAAGTATAGATTTAACACGGAAAATACCTTTCTTGTGCACATTGAACA
TTTTTTGTTTGTGGAATCGAGTTTGAGGAGACTTTTGGCTTGTGTTGGAC
TTTTGAAAAGATAAATTTTACTGCGTGACATTATTTCATGGTCGTAATAC
GTTCAAGATGACGTTACTCGATCAACTCTGGGAAGTTCTCCAATCAAGGT
GCTCATTAATGGAGTTTAAACTATGAGTTTATGTCTGAGATTTGCGGAGA
AATCCTCTGCCCATTACTCTGTAAAAGTTTGGAAAGGAATGTTGCGAGCA
TTTCCGAGAAATTCAGTTGATATCGCCAACGATTCTTTTTTTCTACGATT
GCCTTTGTCGTCGATTTTGGAAGATAATTTTTCAATCCTGAAAGGCTTCG
TAAGAGAGAAGCAACCGATTCGAATCTACTGGGATAGGAAAACCGGGATG
TCCTCGAGTTGTGAGACTGGCTCAAAAATCAGATTTAAAAAATGTTTAAG
CTTTCAGTGATGAAGAATATCTTCAATACCTTACGTAGTAATATTCGCTT
TTGTGCCCCTGTAATTAGTCTCCCGTTAAACCCTTGTTAACCCATTTCTG
TTTTATTTCGTACACAGTTCCATAGCTGAAGTGATTGAAGACCCGGTCAA
GCCGACCTTGATTCAACAAGAACTTGAATGCTTGAACGAAGAAATCATCA
AGAATCTGTTAGACGAACAAGATGACATCCTCTTAAAATCCTCATCCTCG
TCAACAAACTCTACCGCTTCGCTTGGTGTACCTTCTGCATCGACGGCGTC
ATCGCAGCGATCGCTGAATGATACGCCAACGTACGGCAGTTCTGACGGTG
AAGCATTTACCGGCACTTTCTACAACGGCTCCATGATGTAAGAATGCTTT
CACTTTGTTTGTTTGTTACTCCTTGTAAAGAGTTACCCATTTCAAAGTGC
CTGCAATTCGTAAGGATTAATCAAAACTGCCTATAAGATAACGACTTCTT
CTAAAACATGATTTTTGTGTGCAACCAACAGTTTTGATTCCTCATGATTT
ATTGTGATCGTAGCATGAAATTTTAGATAGGCTATAATAGCTGTTTGTAT
GCTTCCCATCGCCATAATCGAGCAAAAAAAGTGCATAGTTTGATATTTCA
TAAAAGTATTTGAAGCTTAGAATGTAGCTAGTGTAGACAAGAATCAGGGC
TTTCTTTGTGACGGTTTTTCTTGTATTGATATTTTGAAACTGTATAACTG
GTTTTCCAAGGTGATGAAATCCACCAATTTGACATTTGAAACTTATCTTG
AAAGTCATATTTTCGAAAGTTGATTTTCAATACGAATTAAAATATTTTGA
AAACTAGATATAAATTTATCGCTAAATTTAGAAATCACTCAGCAAGTTTT
GTTATAAAAATAACTTTTTTCATCGTTAAGATTTGCTTCATGTGTCAACT
CAATATATAAAGTCGACAAGATAAGATTCTTTCCACTATTAACATCACGT
TTTAAGTTTGGTGTGAAGTGATTAGATTTGGACGTGATTCTTACTCCTGG
CTCCTGTCATTATTGAATATACAGTAATCAATTTTTTGTTCTTCATTCCA
AGAAACGAAGTCAGCTTTACGTCACTCTATAATTACATTTATCGTAATTA
TTGAAATCAAAAACATTTCGGATATCTTTTGTTCCATCTTCATCTACTCA
GAAAGTAAAAAAGTTTCTCACAGAATTTATTGAAGGTAGATTTAATAGTG
AAAACACCTGTAAAGATGCCAGGTCTTTATAGAAATCAAAGAAAAGGCCA
ACACGGTTCTCTACAAGACAGGTAGTCATTGAGTTCTGAAATCAATTTTG
ACATACGCAAAATTTCTTAACGGTATCTTTTGGCTTACTAAACTAGATAA
AGTAACAGTAAGGGATGATGAATGAAAAGCTTTTGTGTGTAAATCAACTT
ATAAACTAACTAACTTGACTATTCAATTGGAATGTTTGGATGAATAAACG
AGTTAGCAGGAGATCGTTTTGATGTTATTTCCTCGTTCTCTTGTTCAAGT
CAATCTGAAAGAGAGCGGAAATTCTCCACATCGATTGGATTTGAATCTCA
ACTTTAAGAAATTTCTTTAATTGATTTAACGCTGTCTTTCACTTTGGCCC
TTGTTGAAAGACAATTCTGTAACGGCTTTTAGGTGATGTGTGTGTATGGT
TTTGTGTTTTTGAAGAGTTCTCGTTTAGCAGACGTTAGTTTAGCCTCTTT
GTCATTGTTGGAAAAGTGTTATGCGAGGGATGGTGTTTTCAGCTAATTTT
GATAATTGAGATTGACGATATCTGTGTCGTTCGAGTTCCATGTATTTTGA
TTTGATTACTGTTACTTGGTATCCATGATTTGACTGCTGGTTCAACTACA
TTTAAGCCTTTAGAATCCAAAGAAAGTCTGATATTTTGAACAACAGTGTC
ACCGCTATAACTAAAATGTTAACGAAGTTTTTTCAAATGTTTTCTTTCAG
TTATTCACCCGCACAAACGATCGAGGGGTCAGTTTCCCCGCCATCCAACC
GACGTTTCCCGCCCATGATGGAAGCGTTAAAACTTACAGATCGATTTGAC
GCCCCACACACGCCACTCACTAACGGGCACACTTTACCGCGCAGCCACAG
GCGGACACGAACCACATCGAGCGGCAGTTCAATAAGCGATGATGGTGCAC
TTTCGTCGCCTACTTCACCTTTCGGTCGCGGCACTTTCGGCAGACGATTC
AGAAGCACTGGAAGTAGTACGTCCTCGATCTCCTCGACGAGCGGTAAGTG
TAAAAAGAGTCTTATCTTTTCATATTTGGGTCAGATATAAACTAGTAGAA
TAATGGTGAAATACCCTTAGATTCTCCCATTATTTTTTCCACTTTTTAAA
GAAGGAGACAATTAATCGCTTTCCATATCATAATTTCACTGTTTATGTCA
TACTTGTCGGCGAGTGTCGGTTTGATGACGTCATGCTTTTGATCAATTAG
GTCAGTCAATGTCGGTCGTTTTAATCTCATTGCGGGTGTATTCAAGACGT
TAATGAACGGGGCAAACTATAATGGATCGGGCACAAATCTTTAATGGGTT
TAAAAGGTGACTTAGGCTTAAACTCTAGCTGACGTTAGCTAATTGTTTAA
GGGCTGGATTGTTTTTGATCATTTGAGCTCTTTAAATTGATATGTTATCA
AACGTCGTTCACTCTTCCATTGTTTGCTGTAAGCCTCACAAAACAACAAC
AAAATGTATAGTCTAAAATTTTAAATTATGTTCATCTTCTCTCAATATGA
TTATATCCCATTAATTAAGAACCAAGTTATGTTACAAATTTTTGAAAGAA
AGCTTTCAGGGAAGTACAAGTTTACTTTTTATTACACTTTTTTTATATAA
GAACAATAAGGCTCAAAATCGCCAAAAAATAAGAACAACGCTGAGCCTGA
AATTACTCAAATTCAAGTAATTTAGAGGTGAAAGTCGTAAAAATTGGGTA
TAACGCCTAGAATACCTCAATTACACCTTATAAATAAGAACAGGATAAGA
ACAATTTGAAGCTCAAAGTGCCAAAAGAATAAGAACAACAGAGCCTCAGA
AAAATTTTACTGATTCTTATAAAAAAAGTGTATGCAGTCAAAACGGTCTT
TATCAGGAAGACAAAGATTTGAGTCGAAATCAACGACATAAAAACTTGTT
ATTTGCACTCAGACAAAGCTTGAGCTAATCCGGAAAAGGACTTAAATGCT
TTCAGTCTAGTATTTTCCCAGGCTAAATGATTAGTTAAGTCTCATTAAGA
AGTCTCTTAAACTTTCAAATGTTTGTATGAGCTTAGGGAGGAGTTTTTGG
TCATCTTTTTCTGAAAATTATTGTCTTGTTTGGAAAAGTCATTTCTTGTC
TTATTTCCTTGTTACAAATCCAATATGTTGTCTCTTTTGTGTCACTTTGT
TAGGTGTCAATATTAGAAGTTCAGCTTGTTCCCTTAATTTCCTGATTTCA
TCAACCTAAATAAACTTTAGGCCTTGAGATTAAACGTTTGACCAGAATTT
AGCTTGATATGACGGGAGAAGCGGAAAAAAGGTTAACAATATGAAAGAAC
TAGATCCTGTTTAGGATATTAGAAACAAACTACCAGCTCGCAGTTCTATA
AATCGGTTAAAAAATTCATCAGAACTTAAACATTAGATTTCCTCATTCAT
TACAGACTTATTTCAAGAAGTGTTGAGATACCCGGCCGTGAAATTCGATA
AAGACACGGTTGACTTGTGGTATCGACCAAATATCACACGAGATGAAGGT
AAGTTCTTTTGATTGATATTCTCATAATAAACAAACAGGATCTTTCAAAG
CTTTATGAAGAAAAAATGCTACAGGATCGTACCAAAGTTCTTTCGCATAA
GCTTTAAAACGTTTCCTTTGTACCTCAATAACTTTTTTGGATTTCCTGGA
TAACCATTCGGCTAGCTTTATTATCCCTATACTGATTCTTGCAGCATAGG
GAGACATTAAGTTCAACAATTTAACGGTGAGTATACCAATCATTTAAGAC
AATGAATGGACCCGGTGAGCTGCTTGAAGTGAGAGATTGGGCGACGAAAA
TTTTTTCACATTCTTCTAAACACGATAAGATGATATTTAAATGGGTCAGA
TTAGGATTTTGACTTTGACAAATACATAGCCTGCAAAAAAGTTGACGGGG
CCCATAATTTTAAAGATGGTATTGTCGGTCAAAAAGTTGAGCTCCTCGCT
CCCTAATATCGCTTGAATCTTCCTCAGCACACGATAAAACACGATAAATA
TAATTCTTCTCATCTTTGTAGCAACAAGCTTACTTCGAGACGCAGAGCCA
GGAAGTTTCTTGGTACGAGATAGTCAAACCTATGATGGAGCTTTCGGATT
AGCTGTGAAAGTGGATTCGCCACCTGCCAGTGTCCTGAAACAAGTCGATG
GAGATGTTTGTAAGTTTAACATTTTGGATTTGTTTAAGATGTATAAGTGA
ATTTCATATTCACATTCACCCTATGATTACTATGACGAAAATGAGTTGAA
CTATTTGATAATGTCAGTGATAGACGCGAAACTTGTTTGTAGAGTCGTCG
CTCTATTTTAATGATCATTCTTCCTCCTCTTTAATGATCATTCATCTTAA
TGATCACCTTCCCTATATTCTTTGAAGAAAACTTTTCCAATATTCTCTGT
TTTAGCGAAAATCGATTTAGAGAACGAACTGATACGTCACTTTCTTATCG
AACCTTCGAAGAAAGGAGTGCGCTTGAAGGGAAGCAACGAAGAACCAACT
TTCCCTAGCCTAGTTGCCCTCATCTATCAACATTCCATCACTAAGATGGC
CCTCCCAATCACTCTTCTTATACCTTACAAAGGTAAGCTTTGATTAACAC
TTTCATTGAAAGTTTATGGAGTCATCTTCTATTAAAACCTTTCAAAGAAT
TGATTCCCTTAACATGAAACTTAGACGAGAACCTAAAAACGTTCCTGGCT
TGAATTAATTTCCAAAGGCATCAATTTTTTATATGTTATGGTTAAACAGC
GATAAGCCATAATCGTTGAGGCAGACTTTGATTACCCTGTGGGTCATCTA
TTTCGTTATGAATCTAACGACAAAGTAATGGTGTAACTTCTTATCTTCAT
ATTGATAGACTCAGTTGACGGTGGCAACCCTGCAGACAACCGACTGTCAA
AACTCAGCGAAACACAATTACTGGTCAAAGGAGCAGCATGTGATTTATTA
TACCTGGGCGGTGTGAAGGTGGACAAGCTAACGGGTGATGGAGCTGTCCA
GTACGCCATGAACAAGGTGGCATCACTTTCCACCCAATTAAAGACTACAA
TCGTTAACATCAAAGTCAACCAAGATGGTATCACCCTCACCGATAACAAT
CGAAGGTTTGTCTCTATTTTCATACAAACATATATCAGTCTAATCGAAGC
TGAGAATATGAAAAAAGCTCCGTTCTTGTAATTAGAGAATAGACTTCGAC
TTGACTGTCCGAAAATGGCGGACAATTTAAAAAAGCAAGCACGCGAACAA
GAGATCTTTAGATCTCAATTAAAGTATGTTTGGCATAACATTTAAAATCC
TGCTCCTGTTTCCAGGATGTTTTTCCGGCAACATTTCCAGATGGCGAATG
TCCTACATTGTGGAGTGGATCCAAAATCACGACAAGTTAATTTGAAGACA
TTCGCGAATCGTGAAGACAAAGATGTCGGGTAAGAGTCTACTTTTTGTAG
ATTATATAGCTTAATTCTTTCGTTTACATGTTTGTTTTATAAGCATTGCA
CGTATAAGCATATCTAGGCTCAGATATTAGTAGGGGGAAATTTGTTCGTT
TTTTTGAGGTCGCTCGATTTTTTTAGTCAAAGCACTTGTTATACATTTTT
GGAAAGCTAAGGGGTAGGGGAATCAAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCCCAAGTTATTTTGATTCCCCTACCCTTTAGCTT
TCCAAAAATGTATAACAAGTGCTTTGACTAAAAAAATCGAGCGATTTTAC
AAATTTCCCCCTACTATATGTCAAAAATCTAATCATACACAGTAATGATT
TTGCCCTGTTTTTGGCTGAAATTTTACGGTTTCTCTGAATATTCCTATGA
TTTTTGCATGAGGAATATAAGCACCCTTATAAGCATTTTTTAGCCTTGTC
AAGCCCTCGAACTAAGCACCTCCGAGCCTGTTTTCTATATTTATAAAAAA
CATGTATCTGGATATCTTGGTTTTATCGGAGCTCGTTTAAAGCTTTTATA
GAGTAGGGTTTAGATAAGGGTTTCGAATTCAAGATTTACAACCCATACCG
TCATATTTGAACGTTCATTTTTGTTTCCCTTTTTAGTTGTTTCGGCTTTG
TGGTAGAGAATGAAAGGAAGACAGAACATCAATGTTACATGTTCGCTGAA
CTGGAGCAAGATCAACCAGCTTCGGCCGTCATCAATTTCATACATAAAGC
CATGCGGTACGCTCGTGTATAAACTTTAATGGTGGTGTTGGATTATGTTT
CAGTTGAGAAGCAAACGTAATGGAGAAAAATGGTTCCTATTCCACATGAG
TAGCGTTCGATACGTAGTTTGGCTCAACGGTAGAAGAGCACGCGTTCTCA
GACCAGATGTAGAATTCGGGAAACCTATATAATACAATCATGTTAGAACT
GTAAAATAAAAAAAAATCATCTAACGAAAAACAAATCTGCTGTGGTAACA
AAATAAGCATAAGCTAAACAAAGACATATAAAAGCAAATTTAATTTCGAA
GACAAAAGATGGAAGATGTTTTATTGGTAAAATACAGACTGGTCTGTAAA
TTATATTTATACACTTTTTTTATTTACTTACTGTCATGGTTTCGGTGACA
GCATGCAGGGATTTCCCGAGCTGTTAATTAAAATATACATTTAATTGTAA
GCATTTTACTGTACAAAAAATTATTCACTCTCAGAGGGTCAACGATATAG
GTTGGTTCAACGCTCAAAATTTTCAAAGACAACCTTTCAGAACATTTTGC
TACTCAGTACTCAAATACTTGTTTTTTACAAGCATAACGTTTATAAGCAT
ACGTAGGCTCACTATTTGGTACCCAAACAATGGCTCTATTGAACAATCGA
ATGCTAATCACATTGCGAGCCTGGTATAGGTGCAGACACTTGCTCATAAA
AAAACATGTAATATCGAATTCAAACTGGTGTCTCTAAGAGAAAAAGTAAA
TTTTTGTTTTGAAGAATTTTCATACTGTTGGCTTCTTGGCTACAATACAT
GGGAACTTGATTTGATTAAATAAAAAGCAATTTGTTATACTTTGTAATAT
TATCGCGAAATATATTTGAAAATATTCCAATGTTTTTTCTACGTTTTCTA
AGATATATAGTTTTACAATATTCCTTCTTTGTTATTTAAAAAGATAAACA
CCCTTTATTATGTAAATAGATCTTATCTTAAAAAATCTATAAAATTAACA
TCTTCTGACTTTATATCCTAAACCTCGAATAAAAGGTTGCTTTCTGATGC
AGATCAATATGATAATTCTAATTCGCAATGATGGACTNATGATCTGGTCG
AATGTCTTCTGACTTTACATCCTCAACCTCGAATAAAATGTTGCTTTCTG
ATGCAGATCAATATGATAATTCTAATTCGCAATGATGGACTTATTGGTAT
ACTTAAAAAGAGCTAAAAACAGTAAAAAAGGCCTTTAAAAAATGTACAAA
ATCTAATCAGAGGATAATTATCAAAATAAATAATTTTTCAAGTTCTATAA
TAAGATATTTTAGGTGTGACTCGTCTACATCTTGAATTGAGTTTCATCTA
TAAGAAGTATGTAAAAAACATTGTTGAATCTCATAACTTGGCACTGCTTG
GCAATGTACCCATTTAATAGCATATAGTCATGCACAACGTTAAAAGGAAA
AAAATCCCAAAAACACAGCAAGCAGCAAACTCAAATTTTAAAGCTTTTAT
CACCTTTCTCCAGCCTACATAAAAAAGCATGCAGGAAGGAGCCTTGTCAA
ATCGCAAAAATTTTCTGTATGTTTTGTACGCCATCACTCAAAATTTTTTA
AACTCTTATATTAGGCCTTCTTTCAACATTTAAAATCTTACATTTTGATG
GAAAATGCCTTTTTTCTCTGTGAGCTGTATCGTCTGGTTTAAAAGCTGTT
AAGCGATCAGTTTTATTTTCTGCCAAGTCTGATTTGAAAACCTTACTATC
AAATGCATTCTTGCAATGTTTTCGTTCAGCCCGAGTCCAATCTTGACTTG
CAATTCTTTCGACAGTGCACCAAGATTCCTTGTCCATATCTATTTCCTAT
TCTAAATGTCTGCAAAATAAGAAGATAAAAAATTTCCCTTTCAATCACAA
TACATATATGAACAAGAGATATATTTACTATGTTTAAAGATTCTACTTAA
ATCTAGAAAANTTACATATATGAACAGAGATATATTTACTATGTTTAAAG
ATTCTACTTAAATCTAGAAAAGAGCAGTCAACTTTTCTTTCGACTTTTCA
ACAGTCTGATACTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011353XLOC_011353Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020225-exon-sc0000350-1575043694:265210..265255TCONS_00020225-exon-sc0000350-1575043694:265210..265255Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1575043694:262769..263038TCONS_00020225-exon-sc0000350-1575043694:262769..263038Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1575043694:260863..261155TCONS_00020225-exon-sc0000350-1575043694:260863..261155Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1575043694:259358..259450TCONS_00020225-exon-sc0000350-1575043694:259358..259450Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1575043694:258697..258834TCONS_00020225-exon-sc0000350-1575043694:258697..258834Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1575043694:258274..258450TCONS_00020225-exon-sc0000350-1575043694:258274..258450Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1575043694:257751..257997TCONS_00020225-exon-sc0000350-1575043694:257751..257997Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1575043694:257427..257540TCONS_00020225-exon-sc0000350-1575043694:257427..257540Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1575043694:254040..256219TCONS_00020225-exon-sc0000350-1575043694:254040..256219Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1510915933:265210..265255TCONS_00020225-exon-sc0000350-1510915933:265210..265255Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1510915933:262769..263038TCONS_00020225-exon-sc0000350-1510915933:262769..263038Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1510915933:260863..261155TCONS_00020225-exon-sc0000350-1510915933:260863..261155Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1510915933:259358..259450TCONS_00020225-exon-sc0000350-1510915933:259358..259450Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1510915933:258697..258834TCONS_00020225-exon-sc0000350-1510915933:258697..258834Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1510915933:258274..258450TCONS_00020225-exon-sc0000350-1510915933:258274..258450Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1510915933:257751..257997TCONS_00020225-exon-sc0000350-1510915933:257751..257997Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1510915933:257427..257540TCONS_00020225-exon-sc0000350-1510915933:257427..257540Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1510915933:254040..256219TCONS_00020225-exon-sc0000350-1510915933:254040..256219Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1491911889:265210..265255TCONS_00020225-exon-sc0000350-1491911889:265210..265255Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1491911889:262769..263038TCONS_00020225-exon-sc0000350-1491911889:262769..263038Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1491911889:260863..261155TCONS_00020225-exon-sc0000350-1491911889:260863..261155Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1491911889:259358..259450TCONS_00020225-exon-sc0000350-1491911889:259358..259450Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1491911889:258697..258834TCONS_00020225-exon-sc0000350-1491911889:258697..258834Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1491911889:258274..258450TCONS_00020225-exon-sc0000350-1491911889:258274..258450Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1491911889:257751..257997TCONS_00020225-exon-sc0000350-1491911889:257751..257997Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1491911889:257427..257540TCONS_00020225-exon-sc0000350-1491911889:257427..257540Clytia hemisphaericaexon
TCONS_00020225-exon-sc0000350-1491911889:254040..256219TCONS_00020225-exon-sc0000350-1491911889:254040..256219Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:254040..265255 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	4.42094e-07	0	0	0.00723498	3.69796e-07	0	1.5543e-09	5.16332e-05	0.470379	0	0	1.22997	3.46753	0.337811	1.2019e-08	2.43888	0	3.15847	0.922662	0	0	2.14225e-06	0	0	1.31126e-07	0.994946	10.687	1.28669	1.88719
Blast
[Close]
BLAST of TCONS_00020225 vs. Swiss-Prot (Human)
Match: TENS1 (Tensin-1 OS=Homo sapiens GN=TNS1 PE=1 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 7.273e-69
Identity = 126/286 (44.06%), Postives = 186/286 (65.03%), Query Frame = 3 
Query:  642 VKFDKDTVDLWYRPNITRDEATSLLRDAEPGSFLVRDSQTYDGAFGLAVKVDSPPASVLKQVDGDVSKIDLENELIRHFLIEPSKKGVRLKGSNEEPTFPSLVALIYQHSITKMALPITLLIPYKDSVDGGNPADNRLSKLSETQLLVKGAACDLLYLGGVKVDKLTGDGAVQYAMNKVASLSTQLKTTIVNIKVNQDGITLTDNNRRMFFRQHFQMANVLHCGVDPKSRQVNLKTFANREDKDVGCFGFVVENE-RKTEHQCYMFAELEQDQPASAVINFIHKAM 1496
            VKF +DT   WY+P I+R++A +LL+D EPG+F++RDS ++ GA+GLA+KV SPP ++++Q      K D+ +EL+RHFLIE   +GV+LKG   EP F SL AL+YQHSI  +ALP  L+IP +D  D     D+     S   LL +GAAC++L++  V ++ LTG  A+  A ++  +       TIV+ KV+  GITLTDN R++FFR+H+ +  V  C +DP+ R+  +KT      K    FGFV   +   T++ C++FAEL+ +QPASA++NF+ K M
Sbjct: 1453 VKFVQDTSKYWYKPEISREQAIALLKDQEPGAFIIRDSHSFRGAYGLAMKVSSPPPTIMQQNK----KGDMTHELVRHFLIETGPRGVKLKGCPNEPNFGSLSALVYQHSIIPLALPCKLVIPNRDPTDESK--DSSGPANSTADLLKQGAACNVLFVNSVDMESLTGPQAISKATSETLAADPTPAATIVHFKVSAQGITLTDNQRKLFFRRHYPLNTVTFCDLDPQERKW-MKTEGGAPAK---LFGFVARKQGSTTDNACHLFAELDPNQPASAIVNFVSKVM 1728
The following BLAST results are available for this feature:
BLAST of TCONS_00020225 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENS17.273e-6944.06Tensin-1 OS=Homo sapiens GN=TNS1 PE=1 SV=2[more]
back to top