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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020262 ID=TCONS_00020262|Name=TCONS_00020262|organism=Clytia hemisphaerica|type=transcript|length=1863bp
GTCTAAAATTCTATTCGTAAAATCATTTATAAATATAACTTTCGTCATCA
CAAAATGTGTCCAAATGATATTAGTGCAAATTCACCAGTAAAAAAATTCA
CCTGGCAATGGTATGCCTGTTTTCCTCCTCAAAATTCTCAGTTTCCTCTC
GTTCCACACAATTGTATTTATCTTCCTTGATTAGTGAAATAGAATTCATC
AGAGCTGCTTAAATCGCTATCGGACAGTTCTTTTTCAGACAGTAAATGCT
CGTCTCCATCTTTCTTCCGTTTTTTCATCATGATCAGTTTCTTGGAAGCC
GGAACTTTCACTTTCATCGGAATACGGCAGCATCCGCATGCTTTATAAAC
AGCGGTAATGATGAGAAAAGTCGCTCCAAAGAACAATAAAACGGTAATCA
CAACCgcaatgataaaatttttggGTGATTCGGTGATCTTTTTGACGATT
TTCTTCACAACTTTCTCATACCATTGTTCAGGGGGTCGCATCAATTTCTC
CACATTGGTAATATTTCCCGAATGTGCGCCAGGGGAAATCCCAATCGACC
GACATAAAATAGCGTAGACGTCGACATTCCCAATAGCTGGAATGACGGTG
TTTTCTTTAAAAGCTGGCCCCTGAGCTAGAAACATGGCGTGAGAAGACTC
GAATTTTCCGTCGAAACCCATCAACGCTCTCTTGGAATCCACAATCCGGT
TTTTGTAGATTCGCCAATGCTCTTTCGCTACTAAAGTGATAGGTGCGTTC
CTGGTTTTATGTTTGTAATGGAAGTTGTGGGGAATGTCGTTTGCAGCGAG
GACGgtcatttgtttgtttttcttccaaGTATGAAGTAAAGCTTTCTCCA
CCGTTTTATCTTTGGGATAGATACTCATGATGGGACTTTTACTCAGTact
tcaaatttgtttttgtatttcGAGTTGCTATCATTTTCTAGTAAATCACT
CAAAAAGATTTCTTTATGAGCAGCAATCTCAGTCGCGCCTGATTCGCCTG
TCACAacgaaattgactttttcattCAGCTTTTTTGCCTTTAACCAATCC
AACATGTGTGTAATAAACGAGTCAATCTTCTTCAATGCGTGTTTGGTTTC
GTTGCTATGGATACCAGAAGCGATCATTGATTTGTACGGTTCCTCAAAAT
ACACACCAATAAAAGATGGTGCGCTAGTTGTTGTGTTGGTCAGCCATTTT
TTCACAAGATTCACTCGTTGTTGAAAAGGCATCACTTCCTTTACGATCTC
ATTGTTCGAAATCAACTCTTTAAAAGGATCTACAAAATTCTTTCCGTGAC
ACGAATAATCCGGTTTTAATCCGTCTACACCGTAACCAGGCCAATAACAC
AAGGCGCtgctaccattttgattctgaTTACGTAACCAGATAGGTTCTAG
ATCTTCCCCATACCATTTCGTTGAAGTTGTTTTGACGTCGAAATGATCTC
CTTTAACGTTTCGCATTTTGTTAGACATGATACCATGCTCGTTCGGATAT
CTCCCAGTTGACATTGTCATAAAAGAGGGTAGGCTTTCAGTCTGGAAGGC
ATTTATTTTGTGTTTAGCCCACACTCCGTGCGTTTTCATTCTCTCAAGAG
AACGCATCGAGGCTAGCTTCTCGACATCCCATCTCAAACCGCTGAAAGCA
AAAACGACGGTCTTTTGATGACAAGGTTTTTCGTGCGCAATCACTTTGTC
AGCTTTCGACGAATGGAAGATTGGAACGAGCAACAAGAAAGTGATAAAAA
TCATTTCTTCTGTTTGTCTTCCCAttcgttttttgttttaatattttgtc
tctAGAAAAAATACAGAAtgcaaaattatgaaaaatttcctATTAACATA
AAATGACTATAAA Run BLAST on NCBI protein sequence of TCONS_00020262-protein >TCONS_00020262-protein ID=TCONS_00020262-protein|Name=TCONS_00020262-protein|organism=Clytia hemisphaerica|type=polypeptide|length=535bp
MGRQTEEMIFITFLLLVPIFHSSKADKVIAHEKPCHQKTVVFAFSGLRWD
VEKLASMRSLERMKTHGVWAKHKINAFQTESLPSFMTMSTGRYPNEHGIM
SNKMRNVKGDHFDVKTTSTKWYGEDLEPIWLRNQNQNGSSALCYWPGYGV
DGLKPDYSCHGKNFVDPFKELISNNEIVKEVMPFQQRVNLVKKWLTNTTT
SAPSFIGVYFEEPYKSMIASGIHSNETKHALKKIDSFITHMLDWLKAKKL
NEKVNFVVTGESGATEIAAHKEIFLSDLLENDSNSKYKNKFEVLSKSPIM
SIYPKDKTVEKALLHTWKKNKQMTVLAANDIPHNFHYKHKTRNAPITLVA
KEHWRIYKNRIVDSKRALMGFDGKFESSHAMFLAQGPAFKENTVIPAIGN
VDVYAILCRSIGISPGAHSGNITNVEKLMRPPEQWYEKVVKKIVKKITES
PKNFIIAVVITVLLFFGATFLIITAVYKACGCCRIPMKVKVPASKKLIMM
KKRKKDGDEHLLSEKELSDSDLSSSDEFYFTNQGR Run BLAST on NCBI transcript from alignment at sc0000350:79430..81292 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020262 ID=TCONS_00020262|Name=TCONS_00020262|organism=Clytia hemisphaerica|type=transcript|length=1863bp|location=Sequence derived from alignment at sc0000350:79430..81292 (Clytia hemisphaerica)
TTTATAGTCATTTTATGTTAATaggaaatttttcataattttgcaTTCTG
TATTTTTTCTagagacaaaatattaaaacaaaaaacgaaTGGGAAGACAA
ACAGAAGAAATGATTTTTATCACTTTCTTGTTGCTCGTTCCAATCTTCCA
TTCGTCGAAAGCTGACAAAGTGATTGCGCACGAAAAACCTTGTCATCAAA
AGACCGTCGTTTTTGCTTTCAGCGGTTTGAGATGGGATGTCGAGAAGCTA
GCCTCGATGCGTTCTCTTGAGAGAATGAAAACGCACGGAGTGTGGGCTAA
ACACAAAATAAATGCCTTCCAGACTGAAAGCCTACCCTCTTTTATGACAA
TGTCAACTGGGAGATATCCGAACGAGCATGGTATCATGTCTAACAAAATG
CGAAACGTTAAAGGAGATCATTTCGACGTCAAAACAACTTCAACGAAATG
GTATGGGGAAGATCTAGAACCTATCTGGTTACGTAAtcagaatcaaaatg
gtagcaGCGCCTTGTGTTATTGGCCTGGTTACGGTGTAGACGGATTAAAA
CCGGATTATTCGTGTCACGGAAAGAATTTTGTAGATCCTTTTAAAGAGTT
GATTTCGAACAATGAGATCGTAAAGGAAGTGATGCCTTTTCAACAACGAG
TGAATCTTGTGAAAAAATGGCTGACCAACACAACAACTAGCGCACCATCT
TTTATTGGTGTGTATTTTGAGGAACCGTACAAATCAATGATCGCTTCTGG
TATCCATAGCAACGAAACCAAACACGCATTGAAGAAGATTGACTCGTTTA
TTACACACATGTTGGATTGGTTAAAGGCAAAAAAGCTGaatgaaaaagtc
aatttcgtTGTGACAGGCGAATCAGGCGCGACTGAGATTGCTGCTCATAA
AGAAATCTTTTTGAGTGATTTACTAGAAAATGATAGCAACTCgaaataca
aaaacaaatttgaagtACTGAGTAAAAGTCCCATCATGAGTATCTATCCC
AAAGATAAAACGGTGGAGAAAGCTTTACTTCATACttggaagaaaaacaa
acaaatgacCGTCCTCGCTGCAAACGACATTCCCCACAACTTCCATTACA
AACATAAAACCAGGAACGCACCTATCACTTTAGTAGCGAAAGAGCATTGG
CGAATCTACAAAAACCGGATTGTGGATTCCAAGAGAGCGTTGATGGGTTT
CGACGGAAAATTCGAGTCTTCTCACGCCATGTTTCTAGCTCAGGGGCCAG
CTTTTAAAGAAAACACCGTCATTCCAGCTATTGGGAATGTCGACGTCTAC
GCTATTTTATGTCGGTCGATTGGGATTTCCCCTGGCGCACATTCGGGAAA
TATTACCAATGTGGAGAAATTGATGCGACCCCCTGAACAATGGTATGAGA
AAGTTGTGAAGAAAATCGTCAAAAAGATCACCGAATCACccaaaaatttt
atcattgcGGTTGTGATTACCGTTTTATTGTTCTTTGGAGCGACTTTTCT
CATCATTACCGCTGTTTATAAAGCATGCGGATGCTGCCGTATTCCGATGA
AAGTGAAAGTTCCGGCTTCCAAGAAACTGATCATGATGAAAAAACGGAAG
AAAGATGGAGACGAGCATTTACTGTCTGAAAAAGAACTGTCCGATAGCGA
TTTAAGCAGCTCTGATGAATTCTATTTCACTAATCAAGGAAGATAAATAC
AATTGTGTGGAACGAGAGGAAACTGAGAATTTTGAGGAGGAAAACAGGCA
TACCATTGCCAGGTGAATTTTTTTACTGGTGAATTTGCACTAATATCATT
TGGACACATTTTGTGATGACGAAAGTTATATTTATAAATGATTTTACGAA
TAGAATTTTAGAC Coding sequence (CDS) from alignment at sc0000350:79430..81292 >TCONS_00020262 ID=TCONS_00020262|Name=TCONS_00020262|organism=Clytia hemisphaerica|type=CDS|length=1608bp|location=Sequence derived from alignment at sc0000350:79430..81292 (Clytia hemisphaerica)
aTGGGAAGACAAACAGAAGAAATGATTTTTATCACTTTCTTGTTGCTCGT
TCCAATCTTCCATTCGTCGAAAGCTGACAAAGTGATTGCGCACGAAAAAC
CTTGTCATCAAAAGACCGTCGTTTTTGCTTTCAGCGGTTTGAGATGGGAT
GTCGAGAAGCTAGCCTCGATGCGTTCTCTTGAGAGAATGAAAACGCACGG
AGTGTGGGCTAAACACAAAATAAATGCCTTCCAGACTGAAAGCCTACCCT
CTTTTATGACAATGTCAACTGGGAGATATCCGAACGAGCATGGTATCATG
TCTAACAAAATGCGAAACGTTAAAGGAGATCATTTCGACGTCAAAACAAC
TTCAACGAAATGGTATGGGGAAGATCTAGAACCTATCTGGTTACGTAAtc
agaatcaaaatggtagcaGCGCCTTGTGTTATTGGCCTGGTTACGGTGTA
GACGGATTAAAACCGGATTATTCGTGTCACGGAAAGAATTTTGTAGATCC
TTTTAAAGAGTTGATTTCGAACAATGAGATCGTAAAGGAAGTGATGCCTT
TTCAACAACGAGTGAATCTTGTGAAAAAATGGCTGACCAACACAACAACT
AGCGCACCATCTTTTATTGGTGTGTATTTTGAGGAACCGTACAAATCAAT
GATCGCTTCTGGTATCCATAGCAACGAAACCAAACACGCATTGAAGAAGA
TTGACTCGTTTATTACACACATGTTGGATTGGTTAAAGGCAAAAAAGCTG
aatgaaaaagtcaatttcgtTGTGACAGGCGAATCAGGCGCGACTGAGAT
TGCTGCTCATAAAGAAATCTTTTTGAGTGATTTACTAGAAAATGATAGCA
ACTCgaaatacaaaaacaaatttgaagtACTGAGTAAAAGTCCCATCATG
AGTATCTATCCCAAAGATAAAACGGTGGAGAAAGCTTTACTTCATACttg
gaagaaaaacaaacaaatgacCGTCCTCGCTGCAAACGACATTCCCCACA
ACTTCCATTACAAACATAAAACCAGGAACGCACCTATCACTTTAGTAGCG
AAAGAGCATTGGCGAATCTACAAAAACCGGATTGTGGATTCCAAGAGAGC
GTTGATGGGTTTCGACGGAAAATTCGAGTCTTCTCACGCCATGTTTCTAG
CTCAGGGGCCAGCTTTTAAAGAAAACACCGTCATTCCAGCTATTGGGAAT
GTCGACGTCTACGCTATTTTATGTCGGTCGATTGGGATTTCCCCTGGCGC
ACATTCGGGAAATATTACCAATGTGGAGAAATTGATGCGACCCCCTGAAC
AATGGTATGAGAAAGTTGTGAAGAAAATCGTCAAAAAGATCACCGAATCA
CccaaaaattttatcattgcGGTTGTGATTACCGTTTTATTGTTCTTTGG
AGCGACTTTTCTCATCATTACCGCTGTTTATAAAGCATGCGGATGCTGCC
GTATTCCGATGAAAGTGAAAGTTCCGGCTTCCAAGAAACTGATCATGATG
AAAAAACGGAAGAAAGATGGAGACGAGCATTTACTGTCTGAAAAAGAACT
GTCCGATAGCGATTTAAGCAGCTCTGATGAATTCTATTTCACTAATCAAG
GAAGATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020262-exon-sc0000350-1491911889:79430..81292 | TCONS_00020262-exon-sc0000350-1491911889:79430..81292 | Clytia hemisphaerica | exon |
| TCONS_00020262-exon-sc0000350-1510915933:79430..81292 | TCONS_00020262-exon-sc0000350-1510915933:79430..81292 | Clytia hemisphaerica | exon |
| TCONS_00020262-exon-sc0000350-1575043694:79430..81292 | TCONS_00020262-exon-sc0000350-1575043694:79430..81292 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350 | supercontig | sc0000350:79430..81292 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR017849 | Alkaline_Pase-like_a/b/a |
| IPR002591 | Phosphodiest/P_Trfase |
| IPR017850 | Alkaline_phosphatase_core |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008152 | metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008152 |
metabolic process |
| molecular_function |
GO:0003824 |
catalytic activity |
Blast
BLAST of TCONS_00020262 vs. Swiss-Prot (Human)
Match: ENPP5 (Ectonucleotide pyrophosphatase/phosphodiesterase family member 5 OS=Homo sapiens GN=ENPP5 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.615e-46 Identity = 114/407 (28.01%), Postives = 192/407 (47.17%), Query Frame = -2
Query: 489 KPCHQKTVVFAFSGLRWDVEKLASMRSLERMKTHGVWAKHKINAFQTESLPSFMTMSTGRYPNEHGIMSNKM------RNVKGDHFDVKTTSTKWYGEDLEPIWLRNQNQNGSSALCYWPGYGVDGLKPDYSCHGKNFVDPFKELISNNEIVKEVMPFQQRVNLVKKWLTNTTTSAPSFIGV-YFEEPYKSMIASGIHSNETKHALKKIDSFITHMLDWLKAKKLNEKVNFVVTGESGATEIAAHKEIFLSDLLENDSNSKYKNKFEVLSKSPIMSIYPKD---KTVEKALLHTWKKNKQMTVLAANDIPHNFHYKHKTRNAPITLVAKEHWRIYKNRIVDSKRALMGFDGKFESSHAMFLAQGPAFKENTVIPAIGNVDVYAILCRSIGISPGAHSGNITNVEKLM 1679
+P QK ++ +F G RWD + +GV K N F T++ P+ T+ TG + HGI++N M ++ DH ++ + + E+ PIW+ NQ +S WPG V + + H P+ E +S F+ RV + +W T + P +G+ Y+E+P G S + ID + +++ LK KL +N ++T + G T+ + + I L L+ K+ + ++ +SP+ +I PK+ V +AL H + +TV D+P +HYK+ +R PI VA E W I +N+ D G+D H +FLA GPAF++N A+ + D+Y +LC + I+ H+G+ NV+ L+
Sbjct: 24 QPDQQKVLLVSFDGFRWDYLYKVPTPHFHYIMKYGVHVKQVTNVFITKTYPNHYTLVTGLFAENHGIVANDMFDPIRNKSFSLDHMNIYDSK---FWEEATPIWITNQRAGHTSGAAMWPGTDVK-IHKRFPTHYM----PYNESVS----------FEDRVAKIIEWFT---SKEPINLGLLYWEDPDDMGHHLGPDSPLMGPVISDIDKKLGYLIQMLKKAKLWNTLNLIITSDHGMTQCSEERLIELDQYLD-------KDHYTLIDQSPVAAILPKEGKFDEVYEALTHA---HPNLTVYKKEDVPERWHYKYNSRIQPIIAVADEGWHILQNKSDDFLLGNHGYDNALADMHPIFLAHGPAFRKNFSKEAMNSTDLYPLLCHLLNITAMPHNGSFWNVQDLL 399
The following BLAST results are available for this feature:
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