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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020270 ID=TCONS_00020270|Name=TCONS_00020270|organism=Clytia hemisphaerica|type=transcript|length=1243bp
ccataatatatcaaccataaacagcacaagtcctaaattttagtgcaaat
tctattttctatgaagcattgacatgaaatgtagccttaagtccaacaca
tctcaacctttaaagtcaattatctcaaaatagaaaaaatggacttaagg
ctgtcttgaattgacacggcgttttggttgagtcgcaggaggcccatttt
cgcaacaatagacgctttcaattagcCCCCCGTCAGCACCTGGAACTGAC
tgcccaattcccctcacatgtcATAGGTTGACCCAGGCGAAgattcattc
acttgccaagtgaaccgctgcgagtgggaatcgaacctcagtcacctgtg
cagcaaccaaggtcaatgaccactataccacagcgcttTTTCCCACTTAC
AGcttttctctttgatcttttattCGTTTCTTTTGTTGGTTTCTTTTGTT
GGTTTCTTGCGTCATCGATGACTTGCGCAAAATTTCTTGGAATTGAAACA
CATGGATTTAACCTGATTTAACCAAGCTATAAGaatagcctagtttctaa
tcctgatataggagttaaAGTCTAGACTGCTGGTGTTTTGCTGATGCGCT
TCCATGACTCGAAATATCACATTTTGTAACGCACTGCCTATAAGAAGATG
ACATGTGTGCCGCCAGAAATTGGCTTTCCaaatcagacccttacagtgca
gctcttGAGCAGTGAATATCCTTATAGTATCCTTATAGTACATTTTACTG
AACGTTtctcacccttacagtgtacgtAGTTTGGTTTGTTGGCCTGTGAG
ATGTTGACACAATCAACAATGtgtaaaacaaatcaaaatgggtgcaAGTC
AAACTATAAAGAgacatcagatttttactgtcagacttgcaATTTAGCAG
CCCCGAGaactagctgggagacccgtctactctgtgCGTGCAGGTAAGTG
GTTTTCAGGCGGATGGATTAttttttagccaatcaaatttcttCAATCAG
ACAAATCTCCCCGAAACCGGGAATCAAACCCATATACTTCTTTTAAGACA
AACCGGGCGGCGCGGGCGGTATATATTTTTTAGCGAAGTGGCTATAGTCA
CGGCAGGTTATTTTTAGTTTGCCGTTACTCTAGCGGCTCCGTAACAGACT
GGCTAAAGTTTCCGGCAGATTGTTTTTTGTAGCTGAATTGCCGGGACTAT
AGCCAGTCCATTACGGAGCCGCTAGAGTAACGGCTTCTACCGG Run BLAST on NCBI transcript from alignment at sc0000350:358113..359355 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020270 ID=TCONS_00020270|Name=TCONS_00020270|organism=Clytia hemisphaerica|type=transcript|length=1243bp|location=Sequence derived from alignment at sc0000350:358113..359355 (Clytia hemisphaerica)
CCGGTAGAAGCCGTTACTCTAGCGGCTCCGTAATGGACTGGCTATAGTCC
CGGCAATTCAGCTACAAAAAACAATCTGCCGGAAACTTTAGCCAGTCTGT
TACGGAGCCGCTAGAGTAACGGCAAACTAAAAATAACCTGCCGTGACTAT
AGCCACTTCGCTAAAAAATATATACCGCCCGCGCCGCCCGGTTTGTCTTA
AAAGAAGTATATGGGTTTGATTCCCGGTTTCGGGGAGATTTGTCTGATTG
aagaaatttgattggctaaaaaaTAATCCATCCGCCTGAAAACCACTTAC
CTGCACGcacagagtagacgggtctcccagctagttCTCGGGGCTGCTAA
ATtgcaagtctgacagtaaaaatctgatgtcTCTTTATAGTTTGACTtgc
acccattttgatttgttttacaCATTGTTGATTGTGTCAACATCTCACAG
GCCAACAAACCAAACTacgtacactgtaagggtgagaAACGTTCAGTAAA
ATGTACTATAAGGATACTATAAGGATATTCACTGCTCaagagctgcactg
taagggtctgatttGGAAAGCCAATTTCTGGCGGCACACATGTCATCTTC
TTATAGGCAGTGCGTTACAAAATGTGATATTTCGAGTCATGGAAGCGCAT
CAGCAAAACACCAGCAGTCTAGACTttaactcctatatcaggattagaaa
ctaggctattCTTATAGCTTGGTTAAATCAGGTTAAATCCATGTGTTTCA
ATTCCAAGAAATTTTGCGCAAGTCATCGATGACGCAAGAAACCAACAAAA
GAAACCAACAAAAGAAACGaataaaagatcaaagagaaaagCTGTAAGTG
GGAAAaagcgctgtggtatagtggtcattgaccttggttgctgcacaggt
gactgaggttcgattcccactcgcagcggttcacttggcaagtgaatgaa
tcTTCGCCTGGGTCAACCTATgacatgtgaggggaattgggcaGTCAGTT
CCAGGTGCTGACGGGGGgctaattgaaagcgtctattgttgcgaaaatgg
gcctcctgcgactcaaccaaaacgccgtgtcaattcaagacagccttaag
tccattttttctattttgagataattgactttaaaggttgagatgtgttg
gacttaaggctacatttcatgtcaatgcttcatagaaaatagaatttgca
ctaaaatttaggacttgtgctgtttatggttgatatattatgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020270-exon-sc0000350-1491911889:358113..359355 | TCONS_00020270-exon-sc0000350-1491911889:358113..359355 | Clytia hemisphaerica | exon |
| TCONS_00020270-exon-sc0000350-1510915933:358113..359355 | TCONS_00020270-exon-sc0000350-1510915933:358113..359355 | Clytia hemisphaerica | exon |
| TCONS_00020270-exon-sc0000350-1575043694:358113..359355 | TCONS_00020270-exon-sc0000350-1575043694:358113..359355 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350 | supercontig | sc0000350:358113..359355 . |
Blast
The following BLAST results are available for this feature:
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