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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020347 ID=TCONS_00020347|Name=TCONS_00020347|organism=Clytia hemisphaerica|type=transcript|length=259bp
GGAGTTGTTTTAGAAAACCGATTGCGTTATTGTTCTCAAATCATGACGGC
ATCGTCTGACGGacatGTTTTATTTTGGGACACGCGCGCGTCTAAATCAG
GCGTCGCTCGAACACCAATGCCCGAAAACACGTCTTCTAATCGAGTAACG
ACTTTCCAACATCTTGATTTGTCATGGAAACCACTTTTAAagGTGACAGC
CCATCGATTGCGTGGCTCAGGCGAATGCAGTCCTGTCAAATTCATTATCG
ATGAAGTGC Run BLAST on NCBI transcript from alignment at sc0000354:212607..213607+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020347 ID=TCONS_00020347|Name=TCONS_00020347|organism=Clytia hemisphaerica|type=transcript|length=1001bp|location=Sequence derived from alignment at sc0000354:212607..213607+ (Clytia hemisphaerica)
GGAGTTGTTTTAGAAAACCGATTGCGTTATTGTTCTCAAATCATGACGGC
ATCGTCTGACGGGTGAGTTTTTCGACGTTctcaaattcgattttcaaggg
gaatcggactttcatcgaataagggagcgtatcaaatagtagagTTTCTT
TTtaacggtgactttcaatattaacGAATAGAAGaacttcgaattagaga
gtgtcaactgtatattGTTTTTGCACAAGTTGTGACAGAGCTTGATGCAA
GCATATTGATTTGATAAGAAGAATTATTGTGCTGTAAAAGCATCAAAATA
TAtgggtttttttttatttagacatGTTTTATTTTGGGACACGCGCGCGT
CTAAATCAGGCGTCGCTCGAACACCAATGCCCGAAAACACGTCTTCTAAT
CGAGTAACGACTTTCCAACATCTTGATTTGTCATGGAAACCACTTTTAAa
ggtgagaaaaaaaaaatttgttatcGCTTATAGATTTCTAGGCTGGGATA
TATTCTTGCCAAGTTAGACGTTTTTCCGACTCTTTAGATTTAAGAGAGGG
GTGCAACATCTTGAAAGAGAAACATGTaggtttgtcaagatattgCGAGT
TTACGGTTATGGATTTTTGCTAAATTATTAATTCAGAGCATTCGTTCTTT
TAGACTCTGTTGAGAAGCAAGCTCATGCTAATCCGctcaccacaagcgat
tttgctcgaaacttttattttttgtcaCGACAGCGAGCGCAGCTTCTGTT
GAAGTTGTTGAATTCTCACTCAAATTAAAAAGAAGTGAGCTGATTTTTAT
TGAAGTAGTTAAAAGGAAGCTGCACTCGCTATACTCATTTACCGGAGCTG
TACTGATGCATCCTTGCAAGGATGAAAATAATGTCTGCGGGTAACAAGTG
ACTTCAAATCTATCTATGAACCTTCCAATGCTAGGTGACAGCCCATCGAT
TGCGTGGCTCAGGCGAATGCAGTCCTGTCAAATTCATTATCGATGAAGTG
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020347-exon-sc0000354-1491911889:212607..212668 | TCONS_00020347-exon-sc0000354-1491911889:212607..212668 | Clytia hemisphaerica | exon |
| TCONS_00020347-exon-sc0000354-1510915933:212607..212668 | TCONS_00020347-exon-sc0000354-1510915933:212607..212668 | Clytia hemisphaerica | exon |
| TCONS_00020347-exon-sc0000354-1575043694:212607..212668 | TCONS_00020347-exon-sc0000354-1575043694:212607..212668 | Clytia hemisphaerica | exon |
| TCONS_00020347-exon-sc0000354-1491911889:212928..213057 | TCONS_00020347-exon-sc0000354-1491911889:212928..213057 | Clytia hemisphaerica | exon |
| TCONS_00020347-exon-sc0000354-1510915933:212928..213057 | TCONS_00020347-exon-sc0000354-1510915933:212928..213057 | Clytia hemisphaerica | exon |
| TCONS_00020347-exon-sc0000354-1575043694:212928..213057 | TCONS_00020347-exon-sc0000354-1575043694:212928..213057 | Clytia hemisphaerica | exon |
| TCONS_00020347-exon-sc0000354-1491911889:213541..213607 | TCONS_00020347-exon-sc0000354-1491911889:213541..213607 | Clytia hemisphaerica | exon |
| TCONS_00020347-exon-sc0000354-1510915933:213541..213607 | TCONS_00020347-exon-sc0000354-1510915933:213541..213607 | Clytia hemisphaerica | exon |
| TCONS_00020347-exon-sc0000354-1575043694:213541..213607 | TCONS_00020347-exon-sc0000354-1575043694:213541..213607 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000354 | supercontig | sc0000354:212607..213607 + |
Blast
The following BLAST results are available for this feature:
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