TCONS_00020351 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00020351
Unique Name	TCONS_00020351
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2038

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000354:280181..294347+
coding sequence from alignment at sc0000354:280181..294347+

transcript sequence

>TCONS_00020351 ID=TCONS_00020351|Name=TCONS_00020351|organism=Clytia hemisphaerica|type=transcript|length=2038bp
ttttcagtcagtaaaagaaaaaaaacgaaattcaATACAAATTAATACAA
AATTAACACATCAGCACACTCAAAGAAATGGCATCAAAGATAACAGTTAA
TACTTCAAAACCAACCAATGAAACGACAGATACACCAAAACCAACCAATG
AAACGACAGATACAACATTCAAAACACCGATAAGCGCCCGCCCGATCTCA
GCGGCCGTTAAGCGGACAGCAAAGACTGCTTTTCCACAAGACTCGCCCTT
CGTTATTCCTCCTTCACCGCTCATGAAGAGATTAGGGTGTGGTACACATG
TCACTATTTATAGATATAAACGTCAAAAGACTTCAGGTGTTGCCGCCTCT
CCATGGGCGATCAAGAAAGCTAATAAGGGGCGTGCGAGAAAACCTATCTT
GGACCGTCTGGCTGAAGAAGCTAAAATTCTAAGAAGTCTCGATCACCCAA
ATATCGTGGTTTTCAAGAAATTCACTAAAACACCAAAAGGAGATGTGTGT
TTATCGATGGAAGCGTTCGGTAAAGGCCTTGATGACATCATCTATAAACA
CCAGGAGAAGGAAGAAATATTCTCCGCTATACAAATTACACAGGTCGCAT
TTTCCATAAGCAACGCTTTAGATTATCTCCATAATACTAAAAAACTATTA
CACGGAGACATGAAAAGTggtaatattttggtcaaaggGAAATTCGAGTT
AATCAAATTATGTGATTTTGGAGTTTCGATTTTTATGAAAGACGACCTAT
CGGCGCCACGAAACACGAAGGCTATGTACGTCGGCTCGGAGCCGTGGCAC
AGtatggaaatcaaaaatggtgATGTTATAACAGATAAAGCAGATATTTT
CTCTTTCGGTTTGGTACTTTGGGAAATGCTTGCGCTGGATGTTCCGCATG
TCTGTCACATGCATAATTCTAAAGAAGatttagaCGGCAGTTTCTTATCT
TCCACAAACGATTCATTCACAATACCTGATTCATATTTCGATGCTATCGG
CACGCGGCCCGCCATGCCCGACTTCCAATACTCCACAGAATACGATCCAG
TTATAGGAACGTTTATTTGCTGCACCATCGAAGATTACACCCGGCGCCCT
TCCGCCCATGATGTCGCAACCTCTCTAAAAGCGATACTTCCTGATTACAA
TATCTCGAATATCGATGGATCTATTTTGCAGACCGAATTATCATCGACAA
TAATTGTTGAAGATCAAAATAAAAGACTAAAAAGTGAAgagaaaaatcct
gaaaaaggTTCAATCGATATTGCTAAAGACCCTGTAACTGGACCTCTTGA
TTCCAAGGACCCTGTAACTGAACCCAAAACAAAGACGGTAAAGATAGTAA
AAGTTTTAGTCGGGGAAGAACATGGTAACAAGGAAAatttaaatgataaa
taaatTAATTGGAATATTAGAAATGATTCAAGATGCATGCAAATCTCGGG
ATTGTTTACGAGGTCTTAGGATCAACTCGACTGACAGATTAACTctgaaa
atgcacttttttcaGCATTACCTTGTAAATATTCAGAAAAGGATAACAAA
TTCGAGATTTTCTTACACTTAGAGGTTTCGTGGGAATTTGTCAATAGTAA
AACATGCATACTGATACCTTCTGCTAGACATAACATGGTAATattatttg
ctcttcatctttgattctttatacagtgattagattgacacatgcgcgat
aaaactTATTTACTTGGTCGTCAGAGGCTGatactttctttgaaaattcg
ACCTCTGATACTGAGGgtaagagtttcttgttgacggtaaCTTTaaatta
tcgaataatagaacttTGAGTAAGAGCCAACNGCCtcaagagtttcttgt
tgacggtaaCTTTAAATTATCGAATAACAGAACTTTGAGTTGTGTCAACT
TCACTagtcgttttctaatttttataaTAATAGATTTTATTGAAAGATAA
TAGACAATACCacgataaaaaaaaagaaatcctataaatttgaagaaaat
tatcagcggaaaaatattaaatatccTATAGATACCCT

Run BLAST on NCBI

protein sequence of TCONS_00020351-protein

>TCONS_00020351-protein ID=TCONS_00020351-protein|Name=TCONS_00020351-protein|organism=Clytia hemisphaerica|type=polypeptide|length=441bp
MASKITVNTSKPTNETTDTPKPTNETTDTTFKTPISARPISAAVKRTAKT
AFPQDSPFVIPPSPLMKRLGCGTHVTIYRYKRQKTSGVAASPWAIKKANK
GRARKPILDRLAEEAKILRSLDHPNIVVFKKFTKTPKGDVCLSMEAFGKG
LDDIIYKHQEKEEIFSAIQITQVAFSISNALDYLHNTKKLLHGDMKSGNI
LVKGKFELIKLCDFGVSIFMKDDLSAPRNTKAMYVGSEPWHSMEIKNGDV
ITDKADIFSFGLVLWEMLALDVPHVCHMHNSKEDLDGSFLSSTNDSFTIP
DSYFDAIGTRPAMPDFQYSTEYDPVIGTFICCTIEDYTRRPSAHDVATSL
KAILPDYNISNIDGSILQTELSSTIIVEDQNKRLKSEEKNPEKGSIDIAK
DPVTGPLDSKDPVTEPKTKTVKIVKVLVGEEHGNKENLNDK

Run BLAST on NCBI

transcript from alignment at sc0000354:280181..294347+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00020351 ID=TCONS_00020351|Name=TCONS_00020351|organism=Clytia hemisphaerica|type=transcript|length=14167bp|location=Sequence derived from alignment at sc0000354:280181..294347+ (Clytia hemisphaerica)
ttttcagtcagtaaaagaaaaaaaacgaaattcaATACAAATTAATACAA
AATTAACACATCAGCACACTCAAAGAAATGGCATCAAAGATAACAGTTAA
TACTTCAAAACCAACCAATGAAACGACAGATACACCAAAACCAACCAATG
AAACGACAGATACAACATTCAAAACACCGATAAGCGCCCGCCCGATCTCA
GCGGCCGTTAAGCGGACAGCAAAGACTGCTTTTCCACAAGACTCGCCCTT
CGTTATTCCTCCTTCACCGCTCATGAAGAGATTAGGGTGTGGTACACATG
TCACTATTTATAGGTATAATTAATTTGTATTTTCTGTACTATTAGCATGG
TTCGAAATAACGACCAGGGttgatttttgggtcggacaagGAGCAATTTA
AGTCGGCAGGGattttttcaagcactttgagcTACTACCGTTTTTGATAT
TTAGATTGAGTTTCAGATGTGTGACAACACGTGAACGAAGCGAGCCCGAT
TTTGAGTTGGGGGTCTTGGGGCGCTCTAAGACCCCCTAACCCCTTAATAA
ATGTTTTCCTACTGAATAATTCTATCTATTCATACTAAAGGCATCTCTTT
CAGCATGATTGAAATATCCAGCTTAATAAAGTTTACAGACGTCATACTTA
CTGACCCTGTCAATATTTTTATCAAATAGTCCCTAGTGTACAGAGATGCC
TTTAGATGGCATTAAAAGATGCAATTTGAAAGGAATCAGAATGGTATCTG
ATAACAATATGAGAAAGGCACGGGAAAGGCATCCGTAAGCCACTTTTGTC
AAGAAAATGACTGGTCATTTTCTTCTAGTATTTTGAGGACTTAAACGTTC
TCTTCGGTGGAGAAAGCAGACAAACTCAATAACCCAGTTGAGTTTCATAA
CTCAATCTTggattgagtatttttgccgGTATACGGTAGTAAAAAAGTGC
TTACTCGGACAATTCAgttgtccgaccgttatttaaAGCCCTTATCGGAC
CTATGTTTGACTAACCGGCGTTCTACCTTACCGCTGATTGAtgtagacga
ctaattcagaaaTAGtggaaaataagcaaaaaaggaAGGGACAAATTGTA
GTTTATACAAAACTGATATTATGCCGTAAAAATTATTGTAGTAtcgtata
ccttatcggggaaaaaaatgtcggagttatgtttagtcgggttttttttt
cgtcggggaaaaatttcgtcacctagaaacattttcgtcattttcccccg
acatttttttccccgataaggtaacaCCCAAacagaccttatcggagttt
ttgatttttcttaaaaagcgtttcgagtgtattacaaaaGAATTCCCccc
gaggaattcctaagagatttctattgtaatagaAACACGCGAAACAATCC
CATAATGCAtcgctttttcagaaaaataaaaaactccgataagatctact
actgtattacacggattATTAACGACTACAATTAATCTTTTTGCCCAAAA
CTGAGGAAAAGCAAGACAGGTCcaaccgtctaaactagagttCATCAATA
TTCGCCCTCTTGTCATCCTACTATTTTTCTCACAGATATAAACGTCAAAA
GACTTCAGGTGTTGCCGCCTCTCCATGGGCGATCAAGAAAGCTAATAAGG
GGCGTGCGAGAAAACCTATCTTGGACCGTCTGGCTGAAGAAGCTAAAATT
CTAAGAAGTCTCGATCACCCAAATATCGTGGTTTTCAAGAAATTCACTAA
AACACCAAAAGGTAGGATTCCTGTTAATAAAGTCATCTCAATTTGTTTTC
GTGCTTATGTTGTAGAGGCAGGCAGGCTGGACACAGATTAAGGGTCGGTT
TGGAACACGCACACAATTGAAGTTGATTGATGCATTGTGTTGACAGAGTT
CAaactaaaaagtacaaaatgaaaatgataaatatgtTGAACTAAAATGA
CAAATCCTTGACTAAATGACAAAATATCCTAGATATCCTCAAAATGCTCG
TGATAAACCTctaaaatctctcaaaatgtgaaaaaatcatagagacaaaa
tgacaagaaaACATGACTGAAATGAGCTAATTCCAAAGgaaattttagat
aaattctaTAATTGAAAATTGTACTGAAAATCCTATGGTTATCCTAACTT
AAAGAGAGGCACTGAGAACCAAAGTCCTAGACAAAAccacagaaaaacaa
aagaaccgaaACTCACGGGCTGGCCTATGAGTGTGTGCTGTGAAATGCCA
TGCCAATAATTCAATGAAAATTGATGAATtataacttgaaattcattgac
ttaaattccaaatttgtaaattaaaaatagtGACTTTTTCTGACTTCCCT
CGCATACATCCTTCTACAAAGGTGTTCTGTCAGAAATGTGAAAATCAGAA
AACGTGAAAACTCTCTgatcaaaattgaaacaattaaaaatgcgTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAATGCGTAAAAAGATAATTGCTTTATGCTAATTA
TAAGAAAATATGTTTTCTCTAAGAAATATGCGatctttttataagatcaa
AGTTCATTAACACGAAgttaaaatgattttgtccattttataagcacaaa
caTTACATATGTAAGTCTTACAAAAGCCACCAATGGGCGTGCAACAAAGG
TAATTCTTTTATTAGAGACCtatcgtattacttcgaataaacgccccttc
tttTTAACaccccttcgaataaacgcccctctttGAAGGAAGAATGTTTA
CCCGCCGTGCTCATCTATCGGTTTCCCTGgttcacttttttataattACG
GTCGCTTATCTCTAACTAATTGACTGGATAAGGAGGTTTCCCATATAAGA
GAAAGCGTCCCCAGTTTTACAGCTAGTTCgtcatcttgttttcaattatG
GTCGATTCGAATGTTATGAAATCTAaggtaaatttgaaaataaaatagtg
AACTTCAAAATTGGACACACTTCTACAGGTAACCTGTGAGCAGTTATCCT
ATCTAATGTGTAAAATAATATGACATCTGTGATTACGTAATGTTCATCAG
TGAACGTGGAATAATTAAGTGGAATAATTTTTGTGAATAGAGAATCTATA
ACTTCGCGTGggcaaaatttcgcgaatcggcCTCTTTTCGCACAATTTCT
TCCATTTtgggattttaaaattttcttcaagactacttttccaaaattaa
tccatgcaaaattaaatccagatAAACTGTAATAAAAGAAACTTTCACTA
ATCAAAGATCCGAAAACAAAATCCCCAAACGAATTATAGTGATTTgtact
gaaaaatgctttttggacctaccacgGAGAttcaaaaagtgacggagccc
gattttcataaaaggaaatttttgggcaaatttgggccaaaaagtgccta
actTTTTATCGTCAATAGGGAAATCacgctaaaatatttattcactcCAG
GATCTACGACTATAAGTCATGCGACTTTAACTATTCTTCACAGGTCGATA
TTGATTtaagctgtgatactcacggtaatcaGCAGCATGCTCACTACACT
tttttactctcttgctatttgtcctatttttatatgattctcatcatcag
gtaggtccattcagcatgttgcttgtcaCGAATTATAGTGATTTGTACTG
AAAAATGTTTGTCGTTTTCAGGAGATGTGTGTTTATCGATGGAAGCGTTC
GGTAAAGGCCTTGATGACATCATCTATAAACACCAGGAGAAGGAAGAAAT
ATTCTCCGCTATACAAATTACACAGGTCGCATTTTCCATAAGCAACGCTT
TAGATTATCTCCATAATACTAAAAAACTATTACACGGAGACATGAAAAGT
ggtaatattttggtcaaaggGAAATTCGAGTTAATCAAATTATGTGATTT
TGGAGTTTCGATTTTTATGAAAGACGACCTATCGGCGCCACGAAACACGA
AGGCTATGTACGTCGGCTCGGAGCCGTGGCACAGtatggaaatcaaaaat
ggtgATGTTATAACAGATAAAGCAGATATTTTCTCTTTCGGTTTGGTACT
TTGGGAAATGCTTGCGCTGGATGTTCCGCATGTCTGTCACATGCATAATT
CTAAAGAAGGTAAACAGGTTTTTTCCTATCatttattaaaaaatcaaaat
ttatttaatagTAAATGCTTTTCGGCTACGCCATCGTCAGTACAGACATA
GAATGgtgaaaaatcagaaattttctATCAAGAAACAAAAATTNAGTTTT
TCCTATCCTTTATTAAAAGCTTTTCGGCTACGTCATCGTCAGTACAAACA
TAGAAtggtaaaaaatcacaaattttctatcaaaaatgtagtctagcaag
ctagacgactaatttatacatagtagaaataaagcaaaaagtaatgaacg
gaacaattttagtcgtctagaaacctttgtgcactaactccaaacaaaag
aaaagtgtcaatattgcaattataattttttcctgctcaaaataattctt
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Naccggattcttccagtcgtttatacaaactaaatcccgtattattatta
gtagtattggtattattagtattacacgcattataaacgactccagtcta
tcaaaaatgttgaaaaaattgcctaaTACTAtcctttttaaaggtttttt
atttttacatgagtGTTTCCGTTTTATATCAggcacatgtttcatatcag
gatggtatctccctattgttatattgagctgatataaacaaaaaaatgtc
tttcttttcctcgctttttgaccaatcttgctccacgtccgcgtcaatcc
aatttggaaaagcttgtgaattaaaattgatgagtgagcactcttatttg
aaaaagaaaacctttaaaaatgctggGTAAATTTTGCTTGTCGTATTAAG
TTTTGAAACATCAATTTTCAATCTTCAAAAGGCTTAGTTTGAGCTTTCCT
TGTCTTTACCTGatggggacaagctggagtttttacaagcacttatttga
tttggttggtcgttaagatgtaataaaagaatcttattactttttctaaa
gaactcgtcatctctatcactttaaatgaccaattagtgaagtatcttgt
aaaaactccagctcatcccatgACCAGCTTGGGAGAGACCGTGTGTTTCA
ATTTCAAGAAATGACGTGCAAGTCATNAGGCATCTCACCTGGTGGCCCAC
TAAACGGTATAAGAACTTCATCGATaatgtaaattgaggaaaaaaaaatg
aaaggaaaACGCTAATCAGGGGAGGGGTACAGCTGCAGGGTACTGATTCA
TAGCCGGCTGGTGGTATCTAATTTGAATCCCAAAAGGGTTAGTACCTCGT
GCTACAATTGAGGTCAGATGATTATATCTCTCTCGTGAATTTGGGTTTTT
GGTGGGTAAAAAATAGTTAAGAATATCCCAATTTTGGCAATTCACAACGC
ATTATTTCAGAGTAATGTTATAGATTTAcaaagctcgaagggctagatgg
cgtgcttttgctgaaaagtgtgtcgaggttaggtaggaaatcctacctaa
gttacgtcacattacaatagaatttcagcgcttgaccaatcagaagcttc
gcgggttttcgaaaacaatagcagcaatattttttgcgatattcactttt
tttcgcTTGGAAGAACTTAAAGCACGCCATTTAGtaatctggcacccgat
gtagaaattttcttccaaatcgctaaagctctgaaggtcgggaaaatttt
cagcgggatattggcccgctcctttagagctttagcgtgggcggccgcca
atacgccatcggaatatcagataagccatttagcccttcgggctttataa
atctgtgggtAATGTACCCTTATTTATCTACTGGTTTATAGAGTAAGTGA
GAGTCCCTCTTTTCCTAAAAAATGTTATTACCAGGCTCTACGAAGGGGTG
ATGGTCCAAAGAcaatttctcttgaaaatcNGTACCAGGCTCTACAAAGG
GGTGATGGTCCAATGACAATTTATCTTGAAAATCAGGGTTAGTGCCCTGC
GACAGTATCCTCCTTGGAAAATTTAAGAtctatatattttttgatttggc
TCAGCGATTCAAAATTTAAAGCTATCCAAAATCACGTCTGAAAAAGTCTT
ATCCAttcattgacttccaagcccggaAGGCTAGACTTGGGAATCCTGGA
Tgacgcgtggtttttacacaaacaccggattgaaagtagaatctatcgct
agatttgaaaaaatgcgtcctcaaaaacaaaagaaccgctagatacaatc
cgtcgtcttGATTACGgtgcgttctaggcgcgttttcgatgggaaataag
tggcttcgctttttcttgcctgaTGCTGGTTatagattctactctagccc
ttggggctttaaactcaatgtttgTATCAAGTCAAGGCAATTCTTTACAG
AAAGTCTCGTGTTTTCACCCGGCCTATATGATACCAAGTAATTTATCTCA
GCTAATATAACAAAATATGAGGGAAATGAATCCAAACCCTATACAGCATA
AGCGTAAGCAACCTTTTAAATTCTTGGCATCTCTTGACCTGAACTCATGA
TCATGATTGCTTGAAATGGTCGAATTTAAAATGGTTTCAAAGTCTCCAAA
CTTTATGGCGTCCTGCTTTTACTGAAATTGTGGCAAGATAGAATATAATA
GAGTAAACTTGTTATGACTTCCTCTGTtaatcaattaccatagcaatatt
tgGAAAACGAGGCCCGTGACCTATTTTTATTTCcaggaattttctttcaa
attgtcTTTCAAGTATCTACAAGGGGGGATGGAGGATTCCAGGGGGGTGG
GTGTCAGAAATTTTGTGGCGTCCTGCTGAaattgtttacctttttttttc
agatttagaCGGCAGTTTCTTATCTTCCACAAACGATTCATTCACAATAC
CTGATTCATATTTCGATGCTATCGGCACGCGGCCCGCCATGCCCGACTTC
CAATACTCCACAGAATACGATCCAGTTATAGGTAAGATTGAAATATGTGA
ATTTAGAATTTCGagattgtccaaaatttcgagattgtccgaaatttgga
tgaaatttttttttgacggATGCTTAGTCCGTTTGTCGTTTGTCTACTAT
ATTTAATAACTAGATTTCACCTATTCTAAAGCATTTATAATTATTACTTA
ACTTCCCTGCTCTCAAAGCCCCggtggaaattttttccaaccggggataa
aaatttctattgaaatcccgatggggcaggaattctattgttccaaggtt
aaaaaatccaggggatggttttagagtgcgacttataaacattgaatttc
gaatatggatgaaatcaaaattaattttcacagTAGGGCTGGAATTAAGG
GTATTTATCCCACTGGGGGACgaaatctttttcaaatgttACAGTGGGAC
TCTAGCGGGTCTGTGACCCAGGTGCGTCGAATTCTCAATATCAAAACGGG
AAAACTAAACTTGAAGGTGGTAACTAaatcttttccaaaaaatttctctt
tcgatttgaGCTGATGGTGATTTTTACTCGACTGAAATCAATCCCAACTT
TTTCATATAATAATAAAGTGCCTTTTTGACTGACCTTTtcgctttttcta
taaagtaCGATTTTCATGCACCTCAATAGATTCCCGTAACTTAAGGCGTC
AGACAAAATCTCCGAAATCTAGTAATTTGTGTCTTTTTCATTATTCTATA
TTTAAGCTTCATAGGGTAAATTTTCGTTCTCTAAGTCTTACATGTATGAA
GTTTTTCTTGTGACGGAGACAGTAAGTTTTGCATTAGTCTAGATGCTGAC
TGACTGAGAacaacggtaaatcagcacttttaacGTCCTCGATGTTCCTA
ATCTTTTCAGTCACGCTGCCGTCCTCAAAAGGGTAGAGACAGACTCGATA
TTTGTGGCTGATTGAGGGAGGGGCAATATGCACAGGAAGGCGAAATGCAC
ATTTCAAAGGGTGTTATACCATTACCTgaccaaattcaaaaaaaggcAGG
GCAGTGTTCGCTAGAAACAGAAAAGGGTACTTTTATCAGAGGCTGTTTTT
GCCATGCTTTTTCATAATTCAAGAAGGACAGTATCCAATTACCGGATgct
aaaaaatatgaaaaaaagtcTGAATACGCAGCTCGCCGGCCGCTTGAAGG
ATGGGATATAGTGTTGATACTACTGCGTAAGGGATCGATGTGCAATAGCT
CTAGTTTTGGATTGTGAAGTAAACGATGGTAAAATAAATTTGGTTAAGAT
TGATTATCAAAAGATCGAAGGAATTCattattttctaattcgtaACTCAA
tcgaaaataactttatttattattttacttCTTCTTCTTAACCACTTATA
CATTAGTAAAAGTCGTCTAGAAAATAGGTGCATAAGGTGCGACATAAATT
Tacaaaactatttgaaaataatcaataatcaaaacaatgttatatataaa
atcaaaagaaaccgTGTACAGTACGGTTTAGAATAACCGTAGAATAATCA
AAAACAACAACCATGttatataaaatcaaaaagtacaaTACTTGGCAAAT
AGTAAGCTTAAATCAAAGATATCTAGGGGTGGGTGGGAGTTAGTTTAAGC
TCATCTATCAAAGTGTGAGTTATGTCTCAAAATTTTACCGCCTTCATACT
TCATACCACGTGACTAAGAAACGCCGAACggacaaaaataaattcataaa
aatcTAAATACAAATACTACTATCTTTCCGGAGCAAAATAAAGGTCGACT
TTgaaggtaggaaatcctacttAGGTCACGTGATTTTACAATAGattttc
agcgcttgaccaatcggaAGCTTTTagggtttttgaaaacaaaagcaaca
atattttttctatggcttaaagcacgacatctaacccttcgggctttata
aatataTGCTAATAAACCGTGCCTAATAATTGTCTGAGGATTGTgttttt
tacttcaaaataccccccccccccaaaaaaaaaaggttGCGGATGGGGTT
GCAAAAAAATCAGGGGGGACGGCATTTACTTGGCATCTGAGAGTCATTAT
AATTCAGTTGTTTTAAACGCCTTTTAGAAGACTGACCtctttcccaaatt
ttccacATTTAACTCNAATTCAGTTGTTTTAAACGCCTTTTAGAAGACTG
ACCtctttcccaaattttccacATTTAACTCAGGGTGGGGttgcaaaaat
cgaaaattaataagcaggggtAGACGGCGTTTACTTGGCATCTGAGAGTC
ATTAAAATTCGGTTGTTAACGTCCTGTAAAAGACTGACCCCTTCCCCACA
TTTTCCACTTTCAATTTCTATCCACATGACTTTATTGGAGgcaaatttaa
aagttttttactaCAACTTCAATGGCTCACGTTCAAGAAGGTTAACATCA
CTGTCTTAAACATAGAGAGACAAAATTTAAATGATANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAAGAACaaccaaaggcttcaaaatttttggatgttcttata
aaaaaaacatgtccgtCATTTAAATTCAGCAAGCATAATAACTGAAGAAG
CATCTCCAAAACTGAAATCTTTTGTCGCGTAAGACCACCACCATCTGATA
TCAGTGCTAGTATTATAGAATTTCATCTTCAAGAACTTTCTATAATCGCT
TGGATGGAGAAGAAAAACGTTTGCATCAGCAGGTGTTTTTTCATACAACC
CTTCAGTTATCAAATAATTATCTACTTCACGATATCCAATACCTTTTGGT
TACGATGCAAACCACAGATTTGTATCACCagttatttttgtttctttacg
AATCAAGACGAATTTCTCATTGGCATACTGCTTACGATTTTCCATCGAAC
GTGACATATCTTCATACCACAATTTGTAATTTTCACCGATAAAATCTCCT
CTCCCTGTATTGTAATTCACCAAAAACCTTTCAACAGTCGTGAAAATTCG
AGCAACGATTCCCACATTCCCAGATACTTTATTTAGATTCAAAACAttta
tttgaagattttcaatatttgaatCTCCTcattcatttgatctttgataG
CTGCTTTCTCTTTTTCGCTCTCCACTTTGGCAATTTCCATTTGATTCTTC
AGAGTTTGATTCTCTTCTCGTAAATTGCTATCAGCCTGAATTTGCGCATG
CTCAGATTTGAGTTGCATCAATGCAATCTGGTTTTTCAAGGTTtggtttt
cttcttttaatttGTAATCAGCATTGGTTCGTTGATGTTGAGCTCTCATT
TTCATAATCTCAATCTCGTTTTTAAGAGATTGAATTTCTTTCTCTAAATC
GAgtgttttctgtttttgtttgctTTCAATCTCCATTTCTTTTAACTTGA
AGTCATTTTGGAGTtccaatattttgattttgtgatccaaagtcaatttt
tcaatcTCCTCAGCatgattttgttttagtttagtTATTTCTTTGTCTTT
CGTGGTTTGATAAACTGCACAAGAGGCTTcgttcattttgtttttgtttt
tgtgtcaaTGCAGTTTTGAATCTTTTTGCTAACTAAAGAAAGAACGTTGT
GCAGTTTTACAAATGGATTACACGCTTTTTagtaagaataacttctataa
gaatatcagggtgagatttcaaAGTTAAGACAATAGACTTATTGTTTCGa
gcaatagaaaaataagaataatgctcaccatcagccaaagtacactattc
ttataaaaagaaaagcgtgtaATACATGATCAGATTGCTTGAAGTTAAAC
CTAATTTCTAGCTTGCAGATACCTTCTATGATTCTGGGAAAATCATCACT
ATTTATTTGCCTTGCTATTTCCTGGGGGGGGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggacttat
gACGGGTGTAAGAACTTTAAGGGAAGCCTTTTTTAATGACTAAAAAGTCC
TTTAAATGGGTACAAATTCATAAGTTAGTCTCttaaagggtcccaaaatc
actaaAATCGAGAATTTCCCTCTCAAAGGGTTTCAAGAATTTATTTCTCC
AAAAGAgtttgattttcgatttttggctcggacatactcgtcgcctcgca
aacctagtaccctcGCCCTGCTTATTTTCCCAATATTGAGATACAAAGAC
TAATCATTTCTTATGATTCATAAAATCTCTACAGTACTTCTTTATCACAt
caaaaaaactaaataaaatacTGCTTGGAATTGTTTTGACTTGTAGATGT
AGCAGATCGCCCCAAAAAAACGTAATTGTATCTATTCTATTGGttataaa
tgacgtcattgtaatGATAAGCCAATAGAATACGCCAGTTTTGTTTTGTA
TTAGCCAATCATTTGATACAAGTAACTATCTTTGGTTgataaacaaaatc
aaaactctACTCCTTCAAAGCTTTTAAAAAGATGAACAATTGTTTGTTTT
GACTTCGTGCctcaaaaaatataacgatCAAATTACTAAATTGAAAGTTT
GTAATTGTATCACTTCATAATGTTATGAGAAGGGATATGTGAGTGTTTTT
TGGCTCTCTCGCCAACTGTCTAACAGAAAAAAGTCAGAACGAGAGCTAGA
TAGATTTCAGAATTCACTTTTCGACTTCCAAGTGTCACTTACAAAGattt
ctttctaaaaataaaccttttcataagTTACGTTACAAACAtcgcttgcc
tcgttttgaaattattgccatggtgattaactcccagcggatttcattaa
aactacttcctattcataaaaaaatcatttaatgtctcaagagacataat
caccatggtaattctttgaatacgaggcaagtgatgttcgtgacgtaatt
tatcaAAAGGTTTATCACCTTGTATTCGAtcaatttttgcttattttgct
gaaaatcCCAGTGCTACATTTTTGGCTCTTCTGTACTGCGGGAAACTAAG
TTTaaggattttttcaaaaccaaCTTCAAATGTAATTTTCTCGGCTTTGG
ACAAAGCAACATAGGCCATGCGTGGGCTCTTTTCAGCGTACCATTTTTTT
CCACAATTAAGATTACCGGCAGCCGAATGAATCATTTATAAACGAAGGCA
TTAAATAAATAGTAAAGAAAGAGTTAAAGGCCTTACAAAAATGGactttt
cctgaaaaatattttaccccccactgttgaggatattgatttttcagaGT
ATCGAaatggatatcctactttattagtaaagacctcctggatatcctct
cttataaagatgcttaccccccTTTACCCCTgaatatccgctcccttgta
gatatttaaccccctggatatccacttttgaaaaaaaattgttaaccccc
tggatattcgATATCCTCAACAGCGGGACatggactatttctggaaaagc
ccagtTATATTTGCTATATTTCTCACGGAGGAAGTTTCTTTTTGCATTTT
GTATTTATGCgccccaattttttttatttctatagGAACGTTTATTTGCT
GCACCATCGAAGATTACACCCGGCGCCCTTCCGCCCATGATGTCGCAACC
TCTCTAAAAGCGATACTTCCTGATTACAATATCTCGAATATCGATGGATC
TATTTTGCAGACCGAATTATCATCGACAATAATTGTTGAAGATCAAAATA
AAAGACTAAAAAGTGAAgagaaaaatcctgaaaaaggTTCAATCGATATT
GCTAAAGACCCTGTAACTGGACCTCTTGATTCCAAGGACCCTGTAACTGA
ACCCAAAACAAAGACGGTAAAGATAGTAAAAGTTTTAGTCGGGGAAGAAC
ATGGTAACAAGGAAAatttaaatgataaataaatTAATTGGAATATTAGA
AATGATTCAAGATGCATGCAAATCTCGGGATTGTTTACGAGGTCTTAGGA
TCAACTCGACTGACAGATTAACTctgaaaatgcacttttttcaGCATTAC
CTTGTAAATATTCAGAAAAGGATAACAAATTCGAGATTTTCTTACACTTA
GAGGTTTCGTGGGAATTTGTCAATAGTAAAACATGCATACTGATACCTTC
TGCTAGACATAACATGGTAATattatttgctcttcatctttgattcttta
tacagtgattagattgacacatgcgcgataaaactTATTTACTTGGTCGT
CAGAGGCTGatactttctttgaaaattcgACCTCTGATACTGAGGgtaag
agtttcttgttgacggtaaCTTTaaattatcgaataatagaacttTGAGT
AAGAGCCAACNGCCtcaagagtttcttgttgacggtaaCTTTAAATTATC
GAATAACAGAACTTTGAGTTGTGTCAACTTCACTagtcgttttctaattt
ttataaTAATAGATTTTATTGAAAGATAATAGACAATACCacgataaaaa
aaaagaaatcctataaatttgaagaaaattatcagcggaaaaatattaaa
tatccTATAGATACCCT

Coding sequence (CDS) from alignment at sc0000354:280181..294347+

>TCONS_00020351 ID=TCONS_00020351|Name=TCONS_00020351|organism=Clytia hemisphaerica|type=CDS|length=6630bp|location=Sequence derived from alignment at sc0000354:280181..294347+ (Clytia hemisphaerica)
ATGGCATCAAAGATAACAGTTAATACTTCAAAACCAACCAATGAAACGAC
AGATACACCAAAACCAACCAATGAAACGACAGATACAACATTCAAAACAC
CGATAAGCGCCCGCCCGATCTCAGCGGCCGTTAAGCGGACAGCAAAGACT
GCTTTTCCACAAGACTCGCCCTTCGTTATTCCTCCTTCACCGCTCATGAA
GAGATTAGGGTGTGGTACACATGTCACTATTTATAGATATAAACGTCAAA
AGACTTCAGGTGTTGCCGCCTCTCCATGGGCGATCAAGAAAGCTAATAAG
GGGCGTGCGAGAAAACCTATCTTGGACCGTCTGGCTGAAGAAGCTAAAAT
TCTAAGAAGTCTCGATCACCCAAATATCGTGGTTTTCAAGAAATTCACTA
AAACACCAAAAGGAGATGTGTGTTTATCGATGGAAGCGTTCGGTAAAGGC
CTTGATGACATCATCTATAAACACCAGGAGAAGGAAGAAATATTCTCCGC
TATACAAATTACACAGGTCGCATTTTCCATAAGCAACGCTTTAGATTATC
TCCATAATACTAAAAAACTATTACACGGAGACATGAAAAGTggtaatatt
ttggtcaaaggGAAATTCGAGTTAATCAAATTATGTGATTTTGGAGTTTC
GATTTTTATGAAAGACGACCTATCGGCGCCACGAAACACGAAGGCTATGT
ACGTCGGCTCGGAGCCGTGGCACAGtatggaaatcaaaaatggtgATGTT
ATAACAGATAAAGCAGATATTTTCTCTTTCGGTTTGGTACTTTGGGAAAT
GCTTGCGCTGGATGTTCCGCATGTCTGTCACATGCATAATTCTAAAGAAG
atttagaCGGCAGTTTCTTATCTTCCACAAACGATTCATTCACAATACCT
GATTCATATTTCGATGCTATCGGCACGCGGCCCGCCATGCCCGACTTCCA
ATACTCCACAGAATACGATCCAGTTATAGGAACGTTTATTTGCTGCACCA
TCGAAGATTACACCCGGCGCCCTTCCGCCCATGATGTCGCAACCTCTCTA
AAAGCGATACTTCCTGATTACAATATCTCGAATATCGATGGATCTATTTT
GCAGACCGAATTATCATCGACAATAATTGTTGAAGATCAAAATAAAAGAC
TAAAAAGTGAAgagaaaaatcctgaaaaaggTTCAATCGATATTGCTAAA
GACCCTGTAACTGGACCTCTTGATTCCAAGGACCCTGTAACTGAACCCAA
AACAAAGACGGTAAAGATAGTAAAAGTTTTAGTCGGGGAAGAACATGGTA
ACAAGGAAAatttaaatgataaataaATGGCATCAAAGATAACAGTTAAT
ACTTCAAAACCAACCAATGAAACGACAGATACACCAAAACCAACCAATGA
AACGACAGATACAACATTCAAAACACCGATAAGCGCCCGCCCGATCTCAG
CGGCCGTTAAGCGGACAGCAAAGACTGCTTTTCCACAAGACTCGCCCTTC
GTTATTCCTCCTTCACCGCTCATGAAGAGATTAGGGTGTGGTACACATGT
CACTATTTATAGATATAAACGTCAAAAGACTTCAGGTGTTGCCGCCTCTC
CATGGGCGATCAAGAAAGCTAATAAGGGGCGTGCGAGAAAACCTATCTTG
GACCGTCTGGCTGAAGAAGCTAAAATTCTAAGAAGTCTCGATCACCCAAA
TATCGTGGTTTTCAAGAAATTCACTAAAACACCAAAAGGAGATGTGTGTT
TATCGATGGAAGCGTTCGGTAAAGGCCTTGATGACATCATCTATAAACAC
CAGGAGAAGGAAGAAATATTCTCCGCTATACAAATTACACAGGTCGCATT
TTCCATAAGCAACGCTTTAGATTATCTCCATAATACTAAAAAACTATTAC
ACGGAGACATGAAAAGTggtaatattttggtcaaaggGAAATTCGAGTTA
ATCAAATTATGTGATTTTGGAGTTTCGATTTTTATGAAAGACGACCTATC
GGCGCCACGAAACACGAAGGCTATGTACGTCGGCTCGGAGCCGTGGCACA
GtatggaaatcaaaaatggtgATGTTATAACAGATAAAGCAGATATTTTC
TCTTTCGGTTTGGTACTTTGGGAAATGCTTGCGCTGGATGTTCCGCATGT
CTGTCACATGCATAATTCTAAAGAAGatttagaCGGCAGTTTCTTATCTT
CCACAAACGATTCATTCACAATACCTGATTCATATTTCGATGCTATCGGC
ACGCGGCCCGCCATGCCCGACTTCCAATACTCCACAGAATACGATCCAGT
TATAGGAACGTTTATTTGCTGCACCATCGAAGATTACACCCGGCGCCCTT
CCGCCCATGATGTCGCAACCTCTCTAAAAGCGATACTTCCTGATTACAAT
ATCTCGAATATCGATGGATCTATTTTGCAGACCGAATTATCATCGACAAT
AATTGTTGAAGATCAAAATAAAAGACTAAAAAGTGAAgagaaaaatcctg
aaaaaggTTCAATCGATATTGCTAAAGACCCTGTAACTGGACCTCTTGAT
TCCAAGGACCCTGTAACTGAACCCAAAACAAAGACGGTAAAGATAGTAAA
AGTTTTAGTCGGGGAAGAACATGGTAACAAGGAAAatttaaatgataaat
aaATGGCATCAAAGATAACAGTTAATACTTCAAAACCAACCAATGAAACG
ACAGATACACCAAAACCAACCAATGAAACGACAGATACAACATTCAAAAC
ACCGATAAGCGCCCGCCCGATCTCAGCGGCCGTTAAGCGGACAGCAAAGA
CTGCTTTTCCACAAGACTCGCCCTTCGTTATTCCTCCTTCACCGCTCATG
AAGAGATTAGGGTGTGGTACACATGTCACTATTTATAGATATAAACGTCA
AAAGACTTCAGGTGTTGCCGCCTCTCCATGGGCGATCAAGAAAGCTAATA
AGGGGCGTGCGAGAAAACCTATCTTGGACCGTCTGGCTGAAGAAGCTAAA
ATTCTAAGAAGTCTCGATCACCCAAATATCGTGGTTTTCAAGAAATTCAC
TAAAACACCAAAAGGAGATGTGTGTTTATCGATGGAAGCGTTCGGTAAAG
GCCTTGATGACATCATCTATAAACACCAGGAGAAGGAAGAAATATTCTCC
GCTATACAAATTACACAGGTCGCATTTTCCATAAGCAACGCTTTAGATTA
TCTCCATAATACTAAAAAACTATTACACGGAGACATGAAAAGTggtaata
ttttggtcaaaggGAAATTCGAGTTAATCAAATTATGTGATTTTGGAGTT
TCGATTTTTATGAAAGACGACCTATCGGCGCCACGAAACACGAAGGCTAT
GTACGTCGGCTCGGAGCCGTGGCACAGtatggaaatcaaaaatggtgATG
TTATAACAGATAAAGCAGATATTTTCTCTTTCGGTTTGGTACTTTGGGAA
ATGCTTGCGCTGGATGTTCCGCATGTCTGTCACATGCATAATTCTAAAGA
AGatttagaCGGCAGTTTCTTATCTTCCACAAACGATTCATTCACAATAC
CTGATTCATATTTCGATGCTATCGGCACGCGGCCCGCCATGCCCGACTTC
CAATACTCCACAGAATACGATCCAGTTATAGGAACGTTTATTTGCTGCAC
CATCGAAGATTACACCCGGCGCCCTTCCGCCCATGATGTCGCAACCTCTC
TAAAAGCGATACTTCCTGATTACAATATCTCGAATATCGATGGATCTATT
TTGCAGACCGAATTATCATCGACAATAATTGTTGAAGATCAAAATAAAAG
ACTAAAAAGTGAAgagaaaaatcctgaaaaaggTTCAATCGATATTGCTA
AAGACCCTGTAACTGGACCTCTTGATTCCAAGGACCCTGTAACTGAACCC
AAAACAAAGACGGTAAAGATAGTAAAAGTTTTAGTCGGGGAAGAACATGG
TAACAAGGAAAatttaaatgataaataaATGGCATCAAAGATAACAGTTA
ATACTTCAAAACCAACCAATGAAACGACAGATACACCAAAACCAACCAAT
GAAACGACAGATACAACATTCAAAACACCGATAAGCGCCCGCCCGATCTC
AGCGGCCGTTAAGCGGACAGCAAAGACTGCTTTTCCACAAGACTCGCCCT
TCGTTATTCCTCCTTCACCGCTCATGAAGAGATTAGGGTGTGGTACACAT
GTCACTATTTATAGATATAAACGTCAAAAGACTTCAGGTGTTGCCGCCTC
TCCATGGGCGATCAAGAAAGCTAATAAGGGGCGTGCGAGAAAACCTATCT
TGGACCGTCTGGCTGAAGAAGCTAAAATTCTAAGAAGTCTCGATCACCCA
AATATCGTGGTTTTCAAGAAATTCACTAAAACACCAAAAGGAGATGTGTG
TTTATCGATGGAAGCGTTCGGTAAAGGCCTTGATGACATCATCTATAAAC
ACCAGGAGAAGGAAGAAATATTCTCCGCTATACAAATTACACAGGTCGCA
TTTTCCATAAGCAACGCTTTAGATTATCTCCATAATACTAAAAAACTATT
ACACGGAGACATGAAAAGTggtaatattttggtcaaaggGAAATTCGAGT
TAATCAAATTATGTGATTTTGGAGTTTCGATTTTTATGAAAGACGACCTA
TCGGCGCCACGAAACACGAAGGCTATGTACGTCGGCTCGGAGCCGTGGCA
CAGtatggaaatcaaaaatggtgATGTTATAACAGATAAAGCAGATATTT
TCTCTTTCGGTTTGGTACTTTGGGAAATGCTTGCGCTGGATGTTCCGCAT
GTCTGTCACATGCATAATTCTAAAGAAGatttagaCGGCAGTTTCTTATC
TTCCACAAACGATTCATTCACAATACCTGATTCATATTTCGATGCTATCG
GCACGCGGCCCGCCATGCCCGACTTCCAATACTCCACAGAATACGATCCA
GTTATAGGAACGTTTATTTGCTGCACCATCGAAGATTACACCCGGCGCCC
TTCCGCCCATGATGTCGCAACCTCTCTAAAAGCGATACTTCCTGATTACA
ATATCTCGAATATCGATGGATCTATTTTGCAGACCGAATTATCATCGACA
ATAATTGTTGAAGATCAAAATAAAAGACTAAAAAGTGAAgagaaaaatcc
tgaaaaaggTTCAATCGATATTGCTAAAGACCCTGTAACTGGACCTCTTG
ATTCCAAGGACCCTGTAACTGAACCCAAAACAAAGACGGTAAAGATAGTA
AAAGTTTTAGTCGGGGAAGAACATGGTAACAAGGAAAatttaaatgataa
ataaATGGCATCAAAGATAACAGTTAATACTTCAAAACCAACCAATGAAA
CGACAGATACACCAAAACCAACCAATGAAACGACAGATACAACATTCAAA
ACACCGATAAGCGCCCGCCCGATCTCAGCGGCCGTTAAGCGGACAGCAAA
GACTGCTTTTCCACAAGACTCGCCCTTCGTTATTCCTCCTTCACCGCTCA
TGAAGAGATTAGGGTGTGGTACACATGTCACTATTTATAGATATAAACGT
CAAAAGACTTCAGGTGTTGCCGCCTCTCCATGGGCGATCAAGAAAGCTAA
TAAGGGGCGTGCGAGAAAACCTATCTTGGACCGTCTGGCTGAAGAAGCTA
AAATTCTAAGAAGTCTCGATCACCCAAATATCGTGGTTTTCAAGAAATTC
ACTAAAACACCAAAAGGAGATGTGTGTTTATCGATGGAAGCGTTCGGTAA
AGGCCTTGATGACATCATCTATAAACACCAGGAGAAGGAAGAAATATTCT
CCGCTATACAAATTACACAGGTCGCATTTTCCATAAGCAACGCTTTAGAT
TATCTCCATAATACTAAAAAACTATTACACGGAGACATGAAAAGTggtaa
tattttggtcaaaggGAAATTCGAGTTAATCAAATTATGTGATTTTGGAG
TTTCGATTTTTATGAAAGACGACCTATCGGCGCCACGAAACACGAAGGCT
ATGTACGTCGGCTCGGAGCCGTGGCACAGtatggaaatcaaaaatggtgA
TGTTATAACAGATAAAGCAGATATTTTCTCTTTCGGTTTGGTACTTTGGG
AAATGCTTGCGCTGGATGTTCCGCATGTCTGTCACATGCATAATTCTAAA
GAAGatttagaCGGCAGTTTCTTATCTTCCACAAACGATTCATTCACAAT
ACCTGATTCATATTTCGATGCTATCGGCACGCGGCCCGCCATGCCCGACT
TCCAATACTCCACAGAATACGATCCAGTTATAGGAACGTTTATTTGCTGC
ACCATCGAAGATTACACCCGGCGCCCTTCCGCCCATGATGTCGCAACCTC
TCTAAAAGCGATACTTCCTGATTACAATATCTCGAATATCGATGGATCTA
TTTTGCAGACCGAATTATCATCGACAATAATTGTTGAAGATCAAAATAAA
AGACTAAAAAGTGAAgagaaaaatcctgaaaaaggTTCAATCGATATTGC
TAAAGACCCTGTAACTGGACCTCTTGATTCCAAGGACCCTGTAACTGAAC
CCAAAACAAAGACGGTAAAGATAGTAAAAGTTTTAGTCGGGGAAGAACAT
GGTAACAAGGAAAatttaaatgataaataa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_011427	XLOC_011427	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00020351-protein	TCONS_00020351-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000354	supercontig	sc0000354:280181..294347 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.131	19.3433	13.5227	10.739	9.291	8.08713	6.6403	8.53315	5.3581	5.96654	7.04918	4.18007	3.89896	3.55963	3.6029	4.47069	4.31744	4.62702	1.22417	1.95232	3.63125	4.4724	13.3367	13.0693	5.8308	7.52236	2.27826	2.31503	7.60283	8.26993

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000719	Prot_kinase_dom
IPR008271	Ser/Thr_kinase_AS
IPR011009	Kinase-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004672	protein kinase activity
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Blast

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BLAST of TCONS_00020351 vs. Swiss-Prot (Human)
Match: TOPK (Lymphokine-activated killer T-cell-originated protein kinase OS=Homo sapiens GN=PBK PE=1 SV=3)

HSP 1 Score: 230.335 bits (586), Expect = 1.160e-68
Identity = 129/298 (43.29%), Postives = 187/298 (62.75%), Query Frame = 3

Query:  255 IPPSPLMKRLGCGTHVTIYRYKRQKTSGVAASPWAIKKAN---KGRARKPILDRLAEEAKILRSLDHPNIVVFKKFTKTPKGDVCLSMEAFG-KGLDDIIY-KHQEKEEIFSAIQITQVAFSISNALDYLHNTKKLLHGDMKSGNILVKGKFELIKLCDFGVSIFMKDDLSAPRNTKAMYVGSEPWHSME-IKNGDVITDKADIFSFGLVLWEMLALDVPHVCHMHNSKEDLDGSFLSSTNDSFTIPDSYFDAIGTRPAMPDFQYSTEYDPVIGTFICCTIEDYTRRPSAHDVATSLK 1130
            IP SP M++LG GT V +Y  KR    G++ SPWA+KK N       R     RL +EAKIL+SL HPNIV ++ FT+   G +CL+ME  G K L+D+I  +++  ++ F A  I +VA +++  L YLH  KKLLHGD+KS N+++KG FE IK+CD GVS+ + ++++   + +A Y+G+EPW   E ++   VITDKADIF+FGL LWEM+ L +PH+ ++ N  +D D +F  S  D     ++Y+ A+GTRP +   +    Y  VI  F  CT ED   RPSA  +  +L+
Sbjct:   29 IPASPFMQKLGFGTGVNVYLMKRS-PRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTV-TDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTLSIPHI-NLSNDDDDEDKTFDESDFDD----EAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALE 319

The following BLAST results are available for this feature:

BLAST of TCONS_00020351 vs. Swiss-Prot (Human)

BLAST of TCONS_00020351 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TOPK	1.160e-68	43.29	Lymphokine-activated killer T-cell-originated prot...	[more]

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TCONS_00020351 (transcript) - C. hemisphaerica