TCONS_00020475 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020475
Unique NameTCONS_00020475
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3395

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020475 ID=TCONS_00020475|Name=TCONS_00020475|organism=Clytia hemisphaerica|type=transcript|length=3395bp
TAGCAAACTGCATTGGAAAAGCAGTATAGATATTAGGGGACATAAAAAGG
TCtagaaataaagtaaaaatgaaTATTCAACTTGTGTataatttgatcat
tttgatGGTTCTGAGGAACACCAGAGCTAAAGTAGAAGAACACAAGATTT
CAGATGAAGAACATTTTCACAAGGATGGGAAGCATGACACATCATATGAC
CATGATGCGTTCTTAGGGAAAGGGCATGGACACGACTTTGATGGTCTAGA
ACCGCAAGAAGCCAAACGAAGATTGAGAGAAATGCTTAAAAAGGTTGACA
CGGACAAAGATGGATTCATTTCATTCGAAGAACTTCGTGATTGGGTGGAT
AAACAAAGGATATCGTACATGTGGGAGACACTGGATACAAACATTCGACA
AAATGATGATGACCATGATGGCTTGATCACGTGGATCGAATATAAACATT
CTCAATTTGGAAAATGGGAAGACGCAGAGACGGAGATAGATGCTAAATTA
CAAGCACGTATTAACAAATCAGAGAACAAATTCAAACTCGCTGATACAAA
TGGTGACGGCAAATTAAGTCGCGACGAATTCGCATTTTTCCGACATCCTG
AAGAGAGTCGAGATGAGAAATTACAAGACGTTGCTGTCGATGAGGTCATT
GATGATATGGACCAAAATGGTGACCGgaaaattgaTCAAGAAGAATTTTT
GGGTCAATACGTGGACGATGCAAACAACCCCCCTGATTGGGTCCTCGAAG
ATAGGAAACATTTCCGTGATAAGCTAGACAAAAACAAGAACGGAATGTTG
GAGCGAGAAGAAATGAAAGCCTGGGTACTACCCAATCGTGATGACACAtt
gaaagaaacaaaacatttgATTGCAGATGCAGATGATAATGAAGATGGTA
GACTGAGCTTCGATGAAGTTGCCGatcattttcaaacttttgttgGTAGT
ACAGCTACTGATCATGGACAGGCTTTAAGAGATGAATTatagaaatttta
aacattaaatTCTACCCTAGAAGTATGATATTTGGTTTCAAGCTTACACA
TGGGAATCATCTAAGTGTATtcagctacacgtttttttttaatataagga
atacgtttataaggaactcgaggctgaaaatggtccgaaaactaaggaat
tgttaaggaactggtcaggctgagaataagaaaacaagttcaGGAACAGA
GAGTTAAATTTGAACTTGTACACATATTGACGAAACAACATTCAATAAAC
GTCTTTTTCTGTACTGTAGTTACATCCAATATTAGCAATCAAGtcaataa
ggaactcgataaagaactttgaagctgaaattctctggaaaaataaggaa
ctccaggctcgggaccaagttaaggttccttattaaaaaaacgtgtatta
cgaGTCGTGCTATTACAGAAGAAAAGTATCATACTTCTGGGATATAGACG
ATAGATAGTTatgtaaaaatgttaaaattaatTAATCATGTTATAGAATA
ATTTTACTCAATGAAAACCTCCTGTAAGGATAggcatattttatttttca
ttttccaaagtCAGTGTATGCATGATTTCAAAAGAAAggactttttataa
atatagtctgaaaaaataaaagtgttttGTAAATATCACCACCGGCTTAT
ACCTAAAATTCTGGAAAAAGTTCACTAAGGTTATGAGAATAGTACAATTT
TGAACATTCACACATTTGCGTGTGTTGTGATTATATCTTACACattacaa
aataaataaagtattgtcaaaaaaaattaaattgtttgTTGAGCACTAAT
AAAAAATataactgaaaaaataattGTTACCTTATATTGTATGAAGTAAA
GCACTACgaagaaaattgaataaattgaattaaaaaaaccaTATTTGCAT
CATCCTACCTAACCTAACATTCGACAGCAGACTTAGCCACTGTAAATGaa
gaatagtttcaattttgtttacttttatgCGCTTAATGGCGATCTTAGTT
CATAGAGAAAAGTCGATATCCCTATTTTCGTAATCAGATATAGTGAACCT
CCGATGAGCATATTGACCATAAGGTAGTCTTAAAAACGACGAAATTTCAT
TCTTTTCTTATAATTAGCTACACGGAAAGGATAGAAAGTTTCCTTCAGGA
AAACAATTTGTTGAATGGATTCCTATGGAATATATTGAAAAAACATTACa
tgaaaaatatcatttttctaaACAGCTAACacttgaaaaattatcaaaaa
ttcactaaaaacaTGAAGCCAAATTAAGCTTCGGTTAAATTCTTATAAAC
ATTATGCTCGATTACAGTTTTTTGTATACCACCTGGTGAATCTACACTTT
TGCCGTGTAACAGGGCTAAATGTAAAGATAACAGTTGAAGAGGGATGACA
GCCAGGATACCGGATAAACAATCTACAGTTTTGGGGATGGCGATGGTTAC
ACCGGCGAATTTCTTGATATCTTCATCACCTTCTTCACAAATGACCAATG
GTTTACCACCACGTGCTCTCACTTGCTGCACTGCATTCATACATTTATCA
TAGATGCTATCCCTCATCACAATCATAATAATAGGTTGCTCCTCGTCAAT
TAAAGCTAACGGACCATGTTTCAATTCACCAGAATGGATTCCTTCAGAAT
GCATGTTAGCAATCTCGATCAACTTCAAGGAACCTTCAAAACTGGTCGCC
TGGTGATAACCACGACCTAACAGAATCAATGAACGCTTATTGGTGACATC
TTCAGCAAGCTTTTTGATGTCATCATTCAGCTGTAAGACTTTGGAAATCT
TCTCCGGTAAAATTTGCATCTCATCGATAATGCTACAGATGCGATCGTGT
TTCGAACGCTTGTCACCCGCCATGAAAATAGCGAACATGACGAGCGAGAT
GAATTGACATGTGTATGTCTTGGTGCTGGTCACTCCAACTTCAACACCAG
CATTGATATTGATCCCACAATGTGTTTCCTCGGACAATCGAGAATTCTCT
TCATTGGTAATCCCCACAACCAAGGCATCCCGTTGTTTGCAATACATCAA
TGCAGACAAAACAGAGGAAGTTTCACCAGACTGACTGATAAAAATACAAA
CATCATCCCTAAAAACGGGGACCTCTCGATCCAGAAAGTCACTAGCCAAC
TCCACAAAGACTGGAATCTCCAACAACTCTTCCATAGTTTGACGTGTGCC
AACAGCTACATGGTAACTGGAAGCAGCACCGACGCAAATGATTCGCCGGC
ATCTGTTGATTTCATCTCTGTATCGTTCGATTCCACCTAAATTGACTCGG
TGATTCTTGAAATCGACACGTCCACTCATGGCTTGTTTGATGGCCACTGG
TTGGTCCATGATCTCTTTCTCCATATACGTACTGTATCTCCCTAT
Run BLAST on NCBI

transcript from alignment at sc0000357:130864..140802+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020475 ID=TCONS_00020475|Name=TCONS_00020475|organism=Clytia hemisphaerica|type=transcript|length=9939bp|location=Sequence derived from alignment at sc0000357:130864..140802+ (Clytia hemisphaerica)
TAGCAAACTGCATTGGAAAAGCAGTATAGATATTAGGGGACATAAAAAGG
TCtagaaataaagtaaaaatgaaTATTCAACTTGTGTataatttgatcat
tttgatGGTTCTGAGGAACACCAGAGCTAAAGTAGAAGAACACAAGATTT
CAGATGAAGAACATTTTCACAAGGATGGGAAGCATGACACATCATATGAC
CATGATGCGTTCTTAGGGAAAGGGCATGGACACGACTTTGATGGTCTAGA
ACCGCAAGAAGCCAAACGAAGATTGAGAGAAATGCTTAAAAAGGTAAGGA
GAGTATAGAGATTACATAGatcagcaaaatttcatagTGATAATCCAAAG
AAGTGACAAGCTGACGTTATATAGATGTTATGAATGTTAAATTGCTGAAA
CTCTACACTCATGCATCACACTTAAAACAGGTCTAAAAATCAGTTCTGAA
GCAGATTTTAACCTTTCAAATTTAGTGAAATAGTCATCAGGTGTATTATT
TTTCTGGCTAAACAAAGCCCTAATGCCAAAACATATTCGACTAACAAAGC
ATTTATGAACTTTCCAACAGTTaccaaaaatgattttgtcCGTCTTTGAA
GATACTAAAATGCAGGAGAACGACGTCAACAGAGATCGTCTTGACcttga
aatgaatgaaaatggcTGAAATCTAACACAAGTTTAACATAAGTCCATAT
ATAGGTCTTAGATTTACCAGAAAAAAAGCGCACATAaccagaaatatgat
tttgttAGAAGTTGATTAAATAAGAGTGGCGAATTGATAGAAAGTTCCAT
TTTTAATCTGACAGGTTGACACGGACAAAGATGGATTCATTTCATTCGAA
GAACTTCGTGATTGGGTGGATAAACAAAGGATATCGTACATGTGGGAGAC
ACTGGATACAAACATTCGACAAAATGATGATGACCATGATGGCTTGATCA
CGTGGATCGAATATAAACATTCTCAATTTGGAAAATGGGAAGACGCAGAG
ACGGAGATAGATGCTGTAAGTAACACTGCTGAGTCTCCCGGAACTCTCTA
CAGTCAATTCTTTCTAGTTCGAATctctataatttgaataaaatcaaatt
agaAAGAATAAACTGTAACTTGAATGTCTTGTCAGCTCAAAACAGGTTGT
CTGGTTGCAGGTTATCAGACATCAAATCTCCATAACTTGGAACTCTATTA
TAAGTCGAATTCCTCTAAGCCCGAAAAAGGTTATCTGGTCCCTTCAGACA
TCAAATCTCcataatttgaacaaatttgcGTTTCTTTAGCCGTTCAAATG
TATTTAATGATTCTTATATAAGACAGCTCATGACTGAAGCGTGAATGCAA
CAGAACAGGTCATTTTCTCTCCCCGTATCTCACTTCAACAAGACATAAAG
ATCAGCTTTCCAAAGAAATTAGCAAAGATCAGCACATAGTGAACGAGCTA
CAGTtgacactctataattcgacaTTCTAATGTTCGATGCGCTCcgttat
tcgataatattgaaagtcaccgtcaataagagactctctaaacgacgctc
tattattcgatgaaaattcgaTTCcccatgaagatcgaattagagagcgt
catcTGTATTTTGATATGGCACAAAAGCAACGAAACTGCGAGCTTTTAGT
ATTAACGCCAATCAAGTAACGTGTTGagcattttcaaatattgtgCCATA
TTTTTCCATAGAAATTACAAGCACGTATTAACAAATCAGAGAACAAATTC
AAACTCGCTGATACAAATGGTGACGGCAAATTAAGTCGCGACGAATTCGC
ATTTTTCCGACATCCTGAAGAGAGTCGAGATGAGAAATTACAAGACGTTG
CTGTCGATGAGGTCATTGATGATATGGACCAAAATGGTGACCGGTAGGTG
GTTTTTAAACATTGTTTTAAGTGCTTCCAGTGTTGCCAAACAGTGATAAT
GCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAATTTTCtagctcgc
ttcgctcgcacactcccttttttgtgttcataatgagcgtatagagaggg
gcgccaaaaacaaaaaatctttaaaaagggcgccgtatttgccttggcca
ccccagagaaattttcccaccacgccactgtcTTTAGCCGTTCAAACGTA
TTTAATGATTCTTTTATAAGACGGCTCATGACTGAAACGTGAATGCAACA
GAACAGGCCCGTATCTCACTTCAACAAGACAAAAAGATCAGCTTTCAGTC
TTTCAAAGAAATTAGAAGAGATCAGTTCATAGTGAAAGAACTTTTTCGAT
ACGGCACAAAAGCACCGACTCTGAGCCTTAGTATCAACGCCAACCAACTA
AGTATTGCATTCAACATTTTCACACATTTGTACCATATTTTTTCCATAGA
AATTACAAGCACGTATTAACAAATCAGAGAAGAAATTCAAGCTCGCTGAT
ACAAATGGTGACGGCAAATTAAGTCGCGACGAATTCGCATTTTTCCGACA
TCCTGAAGAGAGTCGAGATGAGAAATTACAAGACATTGCTGTCGATGAGG
TCATTGATGATATGGACCAAAATGGTGACCGGTAGGTGGTTTTTAAACAT
TGTTTTAAGTGCTCTCAGTGTTGCCAAACAGTGATAATGCATACTTTTTG
CTTTTGTGCTtctaatataatataatataatatataataaaaattttggc
tGTGAATAAGGTCCTATATATGTTTGGCTCAAATTGTCTCGACCATATAT
CATAAAAGGGGCAGCCAAGGAATTGCTTCATATATAAGAGCGAGAATAGA
GCAAGTTGAATGGAGCACAAcatttgactttatttttatttttcaggaaa
attgaTCAAGAAGAATTTTTGGGTCAATACGTGGACGATGCAAATAATCC
CCCTGATTGGGTCCTCGAAGATAGAAAACATTTCCGTGACAAGCTAGACA
AAAACAAGAACGGAATGTTGGAGCGAGAAGAAATGAAAGCCTGGGTACTA
CCCAATCGTGATGACACATTGAAAGAAACAAANGCTGACAACGTTCTTTG
AACGTCGATTTAACGTTATATAGATGTTATGAATGTTAAATTGCTGAAAC
TCTACACATGAGTGTATCACACTTAAAACAGGTCTAAAAATCAGTTCTGA
AGCAGATTTTAACCTTTCAAATTTAGTGAAATAGTCATCAGGTGTATTAC
TTTTCTGGCTAAACAAAGCCCTAATGCCAAAACATATTCGACTAACAAAG
CATTTACGAACTTTCCAACAGTTaccaaaaaatgattttgtccGTCTTTG
AAGTTATTAAAATGCAGGAGAACGACGTCAACAGAGATCGTCTTGACctt
gaaatgaatgaaaatggcTGAAATCTAACACAAGTTTAACATAAGTTCAT
TATGGGTCTTAGATTTACCAGAAAAAAGCGCACATAACCAcaaagggggg
gggtttcacggggtacccgattccgtaattccgccaattttttctccaat
ttccgtcacaccgtcttaaattgaaccaaaatcccgtcaccgaaaattcc
tttgaaattcaatatttttgtcgaaaattccgcaaattttgaaaatcttt
tcccaattccgaaattccgcaaattttttttgctaaattccgtttttccg
cactaaaatttcctaattttccgtctccgtcagagaacccaatttccgta
attccgtctaaattttcgccaaattccgccactccgtccgaaaaaagggc
cgattccgctcctccgccaaccatgaacccccccccaCAAATGATTTTGT
TAGAAGTTGATTGAATAAGAGTGGTGAATTGATAAAAAGTTACCATTTCT
TATCTGACAGGTTGACACGGACAAAGATGGATTCATTTCATTCGAAGAGC
TTCGTGATTGGGTTGATAAACAAAGGATATCATACATGTGGGAGACACTG
GACACAAACATTCGACAAAACGATGATGATCATGATGGCTTGATCACGTG
GATCGAATATAAACATTCTCAATTTGGGAAATGGGAAGACGCAGAGACGG
AGATAGATGCTGTAAGTAACACTGCTGGATCCCAACACTGTTTAGTCTCC
CGAAACTTTCTACAGTCCATTCTCTCTAGTTCGAATCTctatattttgaa
taaaatcaaattagaAAGAATAAACTGTAACTTGAATGTCTTGTCAGCTC
AAAACAGGTTGTCTGGTTGCAGGTTATCAGACATCAAATCTCCATAACTT
GGAACTCTATTATAAGTCGAATTCCTCTAAGCCCGAAAAAGGTTATCTGG
TCCCTTCAGACATCAAATCTCcataatttgaacaaatttgcGTTTCTTTA
GCCGTTCAAATGTATTTAATGATTCTTATATAAGACAGCTCATGACTGAA
GCGTGAATGCAACAGAACAGGTCATTTTCTCTCCCCGTATCTCACTTCAA
CAAGACATAAAGATCAGCTTTCCAAAGAAATTAGCAAAGATCAGCACATA
GTGAACGAGCTACAGTtgacactctataattcgacaTTCTAATGTTCGAT
GCGCTCcgttattcgataatattgaaagtcaccgtcaataagagactctc
taaacgacgctctattattcgatgaaaattcgaTTCcccatgaagatcga
attagagagcgtcatcTGTATTTTGATATGGCACAAAAGCAACGAAACTG
CGAGCTTTTAGTATTAACGCCAATCAAGTAACGTGTTGagcattttcaaa
tattgtgCCATATTTTTCCATAGAAATTACAAGCACGTATTAACAAATCA
GAGAACAAATTCAAACTCGCTGATACAAATGGTGACGGCAAATTAAGTCG
CGACGAATTCGCATTTTTCCGACATCCTGAAGAGAGTCGAGATGAGAAAT
TACAAGACGTTGCTGTCGATGAGGTCATTGATGATATGGACCAAAATGGT
GACCGGTAGGTGGTTTTTAAACATTGTTTTAAGTGCTTCCAGTGTTGCCA
AACAGTGATAATGCATACTTTTTGCTTTTGTGTTtctaatataatataat
ataatatataataaaaattcTGGCTGTGAATAAGGTCATATATATGTTTG
GCTCAAATTGTCTCGACCATCTATCATAAAAGGGGCAGGACTTGCTTCAT
ATATAAGAGCGAGAATAGAGCAAGTTGAATGGAGCACAACatttgacttt
ctttttatttttcaggaaaattgaTCAAGAAGAATTTTTGGGTCAATACG
TGGACGATGCAAACAACCCCCCTGATTGGGTCCTCGAAGATAGGAAACAT
TTCCGTGATAAGCTAGACAAAAACAAGAACGGAATGTTGGAGCGAGAAGA
AATGAAAGCCTGGGTACTACCCAATCGTGATGACACAttgaaagaaacaa
aacatttgATTGCAGATGCAGATGATAATGAAGATGGTAGACTGAGCTTC
GATGAAGTTGCCGatcattttcaaacttttgttgGTAGTACAGCTACTGA
TCATGGACAGGCTTTAAGAGATGAATTatagaaattttaaacattaaatT
CTACCCTAGAAGTATGATATTTGGTTTCAAGCTTACACATGGGAATCATC
TAAGTGTATtcagctacacgtttttttttaatataaggaatacgtttata
aggaactcgaggctgaaaatggtccgaaaactaaggaattgttaaggaac
tggtcaggctgagaataagaaaacaagttcaGGAACAGAGAGTTAAATTT
GAACTTGTACACATATTGACGAAACAACATTCAATAAACGTCTTTTTCTG
TACTGTAGTTACATCCAATATTAGCAATCAAGtcaataaggaactcgata
aagaactttgaagctgaaattctctggaaaaataaggaactccaggctcg
ggaccaagttaaggttccttattaaaaaaacgtgtattacgaGTCGTGCT
ATTACAGAAGAAAAGTATCATACTTCTGGGATATAGACGATAGATAGTTa
tgtaaaaatgttaaaattaatTAATCATGTTATAGAATAATTTTACTCAA
TGAAAACCTCCTGTAAGGATAggcatattttatttttcattttccaaagt
CAGTGTATGCATGATTTCAAAAGAAAggactttttataaatatagtctga
aaaaataaaagtgttttGTAAATATCACCACCGGCTTATACCTAAAATTC
TGGAAAAAGTTCACTAAGGTTATGAGAATAGTACAATTTTGAACATTCAC
ACATTTGCGTGTGTTGTGATTATATCTTACACattacaaaataaataaag
tattgtcaaaaaaaattaaattgtttgTTGAGCACTAATAAAAAATataa
ctgaaaaaataattGTTACCTTATATTGTATGAAGTAAAGCACTACgaag
aaaattgaataaattgaattaaaaaaaccaTATTTGCATCATCCTACCTA
ACCTAACATTCGACAGCAGACTTAGCCACTGTAAATGaagaatagtttca
attttgtttacttttatgCGCTTAATGGCGATCTTAGTTCATAGAGAAAA
GTCGATATCCCTATTTTCGTAATCAGATATAGTGAACCTCCGATGAGCAT
ATTGACCATAAGGTAGTCTTAAAAACGACGAAATTTCATTCTTTTCTTAT
AATTAGCTACACGGAAAGGATAGAAAGTTTCCTTCAGGAAAACAATTTGT
TGAATGGATTCCTATGGAATATATTGAAAAAACATTACatgaaaaatatc
atttttctaaACAGCTAACacttgaaaaattatcaaaaattcactaaaaa
caTGAAGCCAAATTAAGCTTCGGTTAAATTCTTATAAACATTATGCTCGA
TTACAGTTTTTTGTATACCACCTGGTGAATCTACACTTTTGCCGTGTAAC
AGGGCTAAATGTAAAGATAACAGTTGAAGAGGGATGACAGCCAGGATACC
GGATAAACAATCTACAGTTTTGGGGATGGCGATGGTTACACCGGCGAATT
TCTTGATATCTTCATCACCTTCTTCACAAATGACCAATGGTTTACCACCA
CGTGCTCTCACTTGCTGCACTGCATTCATACATTTATCATAGATGCTATC
CCTCATCACAATCATAATAATAGGTTGCTCCTCGTCAATTAAAGCTAACG
GACCATGTTTCAATTCACCAGAATGGATTCCTTCAGAATGCATGTTAGCA
ATCTCGATCAACTTCAAGGAACCTTCAAAACTGGTCGCCTGGTGATAACC
ACGACCTAACAGAATCAATGAACGCTTATTGGTGACATCTTCAGCAAGCT
TTTTGATGTCATCATTCAGCTGTAAGACTTTGGAAATCTTCTCCGGTAAA
ATTTGCATCTCATCGATAATGCTACAGATGCGATCGTGTTTCGAACGCTT
GTCACCCGCCATGAAAATAGCGAACATGACGAGGGAGATGAATTGACATG
TGTATGTCTTGGTGCTGGTCACTCCAACTTCAACACCAGCATTGATATTG
ATCCCACAATGTGTTTCCTCGGACAATCGAGAATTCTCTTCATTGGTAAT
CCCCACAACCAAGGCATCCCGTTGTTTGCAATACATCAATGCAGACAAAA
CAGAAGAAGTTTCACCAGACTGACTGATAAAAATACAAACATCATCCCTA
AAAACTGGGACCTCTCGATCCAAAAAGTCACTAGCCAACTCCACAAAGAC
TGGAATCTCCAACAACTCTTCCATCGTTTGACGTGTGCCAACAGCTACAT
GGTAACTGGAAGCAGCACCGACGCAAATGATTCGCCGGCATCTGTTGATT
TCATCTCTGTATCGCTCGATTCCACCTAAATTGACTCGGTGATTCTTGAA
ATCGACACGTCCACTCATGGCTTGTTTGATGGCCACTGGTTGGTCCATGA
TCTCTTTCTCCATATACGTACTGTATCTCCCTATGGGTATAAagagaaat
caatgaaataccATTTCAATAAAGTTATAGTGAATATCTATTTGTCGTTA
CTTGATACTAGCCAATATCATCAGTGTTGCAACCGTCTTGGTAAAACTGG
ATGGAATGTCTAAAACCCGACCAAGGCTAAGCGGAAATCCATGTTAAAAA
GACGGGACAGTTGCAAGATTATATGATACACTGCGAGCCTTACACAGGTG
AAGGGCATCTNTGCCATGAAAATAGCGAACATGACGAGCGAGATGAATTG
ACATGTGTATGTCTTGGTGCTGGTCACTCCAACTTCAACACCAGCATTGA
TATTGATCCCACAATGTGTTTCCTCGGACAATCGAGAATTCTCTTCATTG
GTAATCCCCACAACCAAGGCATCCCGTTGTTTGCAATACATCAATGCAGA
CAAAACAGAGGAAGTTTCACCAGACTGACTGATAAAAATACAAACATCAT
CCCTAAAAACGGGGACCTCTCGATCCAGAAAGTCACTAGCCAACTCCACA
AAGACTGGAATCTCCAACAACTCTTCCATAGTTTGACGTGTGCCAACAGC
TACATGGTAACTGGAAGCAGCACCGACGCAAATGATTCGCCGGCATCTGT
TGATTTCATCTCTGTATCGTTCGATTCCACCTAAATTGACTCGGTGATTC
TTGAAATCGACACGTCCACTCATGGCTTGTTTGATGGCCACTGGTTGGTC
CATGATCTCTTTCTCCATATACGTACTGTATCTCCCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011507XLOC_011507Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020475-exon-sc0000357-1491911889:130864..131156TCONS_00020475-exon-sc0000357-1491911889:130864..131156Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1510915933:130864..131156TCONS_00020475-exon-sc0000357-1510915933:130864..131156Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1575043694:130864..131156TCONS_00020475-exon-sc0000357-1575043694:130864..131156Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1491911889:131678..131878TCONS_00020475-exon-sc0000357-1491911889:131678..131878Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1510915933:131678..131878TCONS_00020475-exon-sc0000357-1510915933:131678..131878Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1575043694:131678..131878TCONS_00020475-exon-sc0000357-1575043694:131678..131878Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1491911889:132575..132756TCONS_00020475-exon-sc0000357-1491911889:132575..132756Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1510915933:132575..132756TCONS_00020475-exon-sc0000357-1510915933:132575..132756Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1575043694:132575..132756TCONS_00020475-exon-sc0000357-1575043694:132575..132756Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1491911889:137329..139538TCONS_00020475-exon-sc0000357-1491911889:137329..139538Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1510915933:137329..139538TCONS_00020475-exon-sc0000357-1510915933:137329..139538Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1575043694:137329..139538TCONS_00020475-exon-sc0000357-1575043694:137329..139538Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1491911889:140294..140802TCONS_00020475-exon-sc0000357-1491911889:140294..140802Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1510915933:140294..140802TCONS_00020475-exon-sc0000357-1510915933:140294..140802Clytia hemisphaericaexon
TCONS_00020475-exon-sc0000357-1575043694:140294..140802TCONS_00020475-exon-sc0000357-1575043694:140294..140802Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000357supercontigsc0000357:130864..140802 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.95529	5.62508	2.2083	1.73855	0	0	0	0	6.17747	8.81871	3.70851e-05	1.84603	0	0	4.36684	5.27695	7.18209	6.9778	4.56276	0.444414	5.89953	8.14801	7.61131	9.80088	0	0	1.38767	0.659585	6.04967	4.89379
Blast
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BLAST of TCONS_00020475 vs. Swiss-Prot (Human)
Match: GFPT2 (Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 OS=Homo sapiens GN=GFPT2 PE=1 SV=3)

HSP 1 Score: 402.905 bits (1034), Expect = 3.742e-125
Identity = 203/360 (56.39%), Postives = 263/360 (73.06%), Query Frame = -1 
Query: 2313 GRYSTYMEKEIMDQPVAIKQAMSGRVDFKNHRVNLGGIERYRDEINRCRRIICVGAASSYHVAVGTRQTMEELLEIPVFVELASDFLDREVPVFRDDVCIFISQSGETSSVLSALMYCKQRDALVVGITNEENSRLSEETHCGININAGVEVGVTSTKTYTCQFISLVMFAIFMAGDKRSKHDRICSIIDEMQILPEKISKVLQLNDDIKKLAEDVTNKRSLILLGRGYHQATSFEGSLKLIEIANMHSEGIHSGELKHGPLALIDEEQPIIMIVMRDSIYDKCMNAVQQVRARGGKPLVICEEGDEDIKKFAGVTIAIPKTVDCLSGILAVIPXXXXXXXXXXLHGKSVDSPGGIQKTV 3392
            G +S +M+KEI +QP ++   M GRV+F+ + V LGG++ +  EI RCRR+I +G  +SYH AV TRQ +EEL E+PV VELASDFLDR  PVFRDDVC FISQSGET+  L AL YCK R AL VG+TN   S +S ET CG++INAG E+GV STK YT QFISLVMF + M+ D+ S  +R   II  ++ LPE I +VL L + I  LA ++  +RSL+++GRGY+ AT  EG+LK+ EI  MHSEGI +GELKHGPLALID++ P+IM++M+D  + KC NA+QQV AR G+P+++C + D +  KFA  TI +P TVDCL GIL+VIPLQLLS HLA+L G  VD P  + K+V
Sbjct:  320 GNFSAFMQKEIFEQPESVFNTMRGRVNFETNTVLLGGLKDHLKEIRRCRRLIVIGCGTSYHAAVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADTLLALRYCKDRGALTVGVTNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFISLVMFGLMMSEDRISLQNRRQEIIRGLRSLPELIKEVLSLEEKIHDLALELYTQRSLLVMGRGYNYATCLEGALKIKEITYMHSEGILAGELKHGPLALIDKQMPVIMVIMKDPCFAKCQNALQQVTARQGRPIILCSKDDTESSKFAYKTIELPHTVDCLQGILSVIPLQLLSFHLAVLRGYDVDFPRNLAKSV 679
The following BLAST results are available for this feature:
BLAST of TCONS_00020475 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GFPT23.742e-12556.39Glutamine--fructose-6-phosphate aminotransferase [... [more]
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