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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020536 ID=TCONS_00020536|Name=TCONS_00020536|organism=Clytia hemisphaerica|type=transcript|length=1195bp
GGGAGGCTGACACTTCGTTTCCCTGGATATCTCCaaaaaaatctgtattt
tgACACATTTGGCTTTCAGATTAACAGAAGCAGTAAAATAAAGCCGAGAA
ATCCATTTTTGAATTGCATTGAACTAAAAAGCATTGTAACAAATcccttt
atttgaaaaattcaatgacttaaggtttttttttgtttctgcgATCACTC
ACGGCTTTCATGATATGGTAGTACACGTTTCAAAGACCGTAGGAGGGGTT
TAATAATCTAAGCCTCAAAGTTTTCTGTCAATACACCAGCATGGCATCCT
TAGTTAATTCCTAAATGACTTTTTAATTTGTTTCCAAGGCCGGCAGCGCT
TTTGTGGTTTTACACCAATTTATTGAAAACTGTTTTTAGACCAATCCGAT
CGTCAAGGGTGTGGTAATGGGTTTTTCTATGCTTTCAAAGAAAAGGTTTA
CATCAGCTTTcaaattctttgtatttcctaAGATTTTACATGAATAAAGC
TTTATTATATTCCCTAAGCAGCTTTTATCTTTTCATTTCCTCCACTCTGT
ACGACATGACTTGTTAACTTAAATTAATGAGCTTATTGTTCTTACAtcgt
gtacacgtttttttattagaacatccaaagtttttgaagccttgaggTGC
TTACCGGGTGGTTACCGATCGGAAGCCTTGAggtgctcttaactttttga
gttttaagcctaaaaatggtctgaacatgttctcattttcgccatttttt
gagtgtttttgtgtattttccTAAGGATTAGGGCGTTTTGGAGTCTACAA
Agccataaaatgtttttaagttgttcctaatattttggtcatcgaagcct
tatgttcttatatagtttgttcttataaaaaaacgtgtaataaccTCTTT
GTTAAAGGACTTAACATTAATGAATGACCCTATTATAACATGGATGGACA
TGTTTTAAAATATTGAGAAACGCCTGGGTGGGGCGGGAAGGGCTGGGTAA
GGGTGGAGGCTTCAACGAAGCTAAGGAAATCACATTATTTCTAGCAAACA
ATATCTGCTTTAATTAACTTTTTACTGTTTCTTATATATTATTTATAAAA
TCAGGTAAttgcttgttttcattttccttttgattttgagagagatAGAG
ATTAGCTCACATGGTAATGTTTAATTTGCTTCATCAAATATCTTT Run BLAST on NCBI transcript from alignment at sc0000357:214661..215855 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020536 ID=TCONS_00020536|Name=TCONS_00020536|organism=Clytia hemisphaerica|type=transcript|length=1195bp|location=Sequence derived from alignment at sc0000357:214661..215855 (Clytia hemisphaerica)
AAAGATATTTGATGAAGCAAATTAAACATTACCATGTGAGCTAATCTCTa
tctctctcaaaatcaaaaggaaaatgaaaacaagcaaTTACCTGATTTTA
TAAATAATATATAAGAAACAGTAAAAAGTTAATTAAAGCAGATATTGTTT
GCTAGAAATAATGTGATTTCCTTAGCTTCGTTGAAGCCTCCACCCTTACC
CAGCCCTTCCCGCCCCACCCAGGCGTTTCTCAATATTTTAAAACATGTCC
ATCCATGTTATAATAGGGTCATTCATTAATGTTAAGTCCTTTAACAAAGA
ggttattacacgtttttttataagaacaaactatataagaacataaggct
tcgatgaccaaaatattaggaacaacttaaaaacattttatggcTTTGTA
GACTCCAAAACGCCCTAATCCTTAggaaaatacacaaaaacactcaaaaa
atggcgaaaatgagaacatgttcagaccatttttaggcttaaaactcaaa
aagttaagagcaccTCAAGGCTTCCGATCGGTAACCACCCGGTAAGCAcc
tcaaggcttcaaaaactttggatgttctaataaaaaaacgtgtacacgaT
GTAAGAACAATAAGCTCATTAATTTAAGTTAACAAGTCATGTCGTACAGA
GTGGAGGAAATGAAAAGATAAAAGCTGCTTAGGGAATATAATAAAGCTTT
ATTCATGTAAAATCTtaggaaatacaaagaatttgAAAGCTGATGTAAAC
CTTTTCTTTGAAAGCATAGAAAAACCCATTACCACACCCTTGACGATCGG
ATTGGTCTAAAAACAGTTTTCAATAAATTGGTGTAAAACCACAAAAGCGC
TGCCGGCCTTGGAAACAAATTAAAAAGTCATTTAGGAATTAACTAAGGAT
GCCATGCTGGTGTATTGACAGAAAACTTTGAGGCTTAGATTATTAAACCC
CTCCTACGGTCTTTGAAACGTGTACTACCATATCATGAAAGCCGTGAGTG
ATcgcagaaacaaaaaaaaaccttaagtcattgaatttttcaaataaagg
gATTTGTTACAATGCTTTTTAGTTCAATGCAATTCAAAAATGGATTTCTC
GGCTTTATTTTACTGCTTCTGTTAATCTGAAAGCCAAATGTGTcaaaata
cagatttttttGGAGATATCCAGGGAAACGAAGTGTCAGCCTCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020536-exon-sc0000357-1491911889:214661..215855 | TCONS_00020536-exon-sc0000357-1491911889:214661..215855 | Clytia hemisphaerica | exon |
| TCONS_00020536-exon-sc0000357-1510915933:214661..215855 | TCONS_00020536-exon-sc0000357-1510915933:214661..215855 | Clytia hemisphaerica | exon |
| TCONS_00020536-exon-sc0000357-1575043694:214661..215855 | TCONS_00020536-exon-sc0000357-1575043694:214661..215855 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000357 | supercontig | sc0000357:214661..215855 . |
Blast
The following BLAST results are available for this feature:
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