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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020567 ID=TCONS_00020567|Name=TCONS_00020567|organism=Clytia hemisphaerica|type=transcript|length=393bp
AGAAAAATGGCAGCTTGCAACCCAAATGAGTTTGGATTCGACGTTATATT
TGCATGGGAAGATGAAAAAGATGCCCAGAATCAAAATGCTCAGATTGGCG
GAGCTATAAACCGTGATGACATCACATGTGCAATATGTCTTCTGGTTTTG
AGAGAGCCTGTACAAGCTGTGGATTGCGGACATCGTTTTTGTACAAAATG
TATTGGAGAATTTCATCTGATTAAcCCTGGAAAATGTCCAAAGGATTGGC
AAGATATCCAGgttttcCCAGACGttggaaaaaagagagaaattttgagt
ctgaaaATCAGATGTAAAAACTTTACCGATGGTTGTAAATGGCAGAACGA
GCTCCGAGAGGAAGAGGCAAGTAAAATGTTTCCGAATTTTAAT Run BLAST on NCBI protein sequence of TCONS_00020567-protein >TCONS_00020567-protein ID=TCONS_00020567-protein|Name=TCONS_00020567-protein|organism=Clytia hemisphaerica|type=polypeptide|length=131bp
RKMAACNPNEFGFDVIFAWEDEKDAQNQNAQIGGAINRDDITCAICLLVL
REPVQAVDCGHRFCTKCIGEFHLINPGKCPKDWQDIQVFPDVGKKREILS
LKIRCKNFTDGCKWQNELREEEASKMFPNFN Run BLAST on NCBI transcript from alignment at sc0000358:91735..92454- Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020567 ID=TCONS_00020567|Name=TCONS_00020567|organism=Clytia hemisphaerica|type=transcript|length=720bp|location=Sequence derived from alignment at sc0000358:91735..92454- (Clytia hemisphaerica)
AGAAAAATGGCAGCTTGCAACCCAAATGAGTTTGGATTCGACGTTATATT
TGCATGGGAAGATGAAAAAGATGCCCAGAATCAAAATGCTCAGATTGGCG
GAGCTATAAACCGTGATGACATCACATGTGCAATATGTCTTCTGGTTTTG
AGAGAGCCTGTACAAGCTGTGGATTGCGGACATCGTTTTTGTACAAAATG
TATTGGAGAATTTCATCTGATTAAGTAAGAAACCATTGTTTTAAAAATAA
ATTATTAAGAATCAAGCTGATTGTACAAAACTTTCTTAAACGAAATATTT
AAGTTTGAGCTATTTATCAAAGCTTACGTAAGGGCAGTATACACTTGTTC
AGTTAGTTAGTTTATCATTATATGTTTTCTATTTTAGCCCTGGAAAATGT
CCAAAGGATTGGCAAGATATCCAGGTCAGTGATAGTTATCTATTTAACAA
GCAAATTTTGTATTCTTTACTTATGGACTTGAAAGGGGTTTATAATTTTA
ACCAATTATGGGGCTGAAATTGTTTTTATTCGTTCTCATAAAAAAGTGTG
TATACCTTCCATTAAAAATTTACTCGAAATATTTTTAGGTTTTCCCAGAC
GTTGGAAAAAAGAGAGAAATTTTGAGTCTGAAAATCAGATGTAAAAACTT
TACCGATGGTTGTAAATGGCAGAACGAGCTCCGAGAGGAAGAGGCAAGTA
AAATGTTTCCGAATTTTAAT Coding sequence (CDS) from alignment at sc0000358:91735..92454- >TCONS_00020567 ID=TCONS_00020567|Name=TCONS_00020567|organism=Clytia hemisphaerica|type=CDS|length=1179bp|location=Sequence derived from alignment at sc0000358:91735..92454- (Clytia hemisphaerica)
GTTTTCCCAGACGTTGGAAAAAAGAGAGAAATTTTGAGTCTGAAAATCAG
ATGTAAAAACTTTACCGATGGTTGTAAATGGCAGAACGAGCTCCGAGAGG
AAGAGGCAAGTAAAATGTTTCCGAATTTTAATCCCTGGAAAATGTCCAAA
GGATTGGCAAGATATCCAGAGAAAAATGGCAGCTTGCAACCCAAATGAGT
TTGGATTCGACGTTATATTTGCATGGGAAGATGAAAAAGATGCCCAGAAT
CAAAATGCTCAGATTGGCGGAGCTATAAACCGTGATGACATCACATGTGC
AATATGTCTTCTGGTTTTGAGAGAGCCTGTACAAGCTGTGGATTGCGGAC
ATCGTTTTTGTACAAAATGTATTGGAGAATTTCATCTGATTAAGTTTTCC
CAGACGTTGGAAAAAAGAGAGAAATTTTGAGTCTGAAAATCAGATGTAAA
AACTTTACCGATGGTTGTAAATGGCAGAACGAGCTCCGAGAGGAAGAGGC
AAGTAAAATGTTTCCGAATTTTAATCCCTGGAAAATGTCCAAAGGATTGG
CAAGATATCCAGAGAAAAATGGCAGCTTGCAACCCAAATGAGTTTGGATT
CGACGTTATATTTGCATGGGAAGATGAAAAAGATGCCCAGAATCAAAATG
CTCAGATTGGCGGAGCTATAAACCGTGATGACATCACATGTGCAATATGT
CTTCTGGTTTTGAGAGAGCCTGTACAAGCTGTGGATTGCGGACATCGTTT
TTGTACAAAATGTATTGGAGAATTTCATCTGATTAAGTTTTCCCAGACGT
TGGAAAAAAGAGAGAAATTTTGAGTCTGAAAATCAGATGTAAAAACTTTA
CCGATGGTTGTAAATGGCAGAACGAGCTCCGAGAGGAAGAGGCAAGTAAA
ATGTTTCCGAATTTTAATCCCTGGAAAATGTCCAAAGGATTGGCAAGATA
TCCAGAGAAAAATGGCAGCTTGCAACCCAAATGAGTTTGGATTCGACGTT
ATATTTGCATGGGAAGATGAAAAAGATGCCCAGAATCAAAATGCTCAGAT
TGGCGGAGCTATAAACCGTGATGACATCACATGTGCAATATGTCTTCTGG
TTTTGAGAGAGCCTGTACAAGCTGTGGATTGCGGACATCGTTTTTGTACA
AAATGTATTGGAGAATTTCATCTGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020567-exon-sc0000358-1575043694:92231..92454 | TCONS_00020567-exon-sc0000358-1575043694:92231..92454 | Clytia hemisphaerica | exon |
| TCONS_00020567-exon-sc0000358-1575043694:92031..92067 | TCONS_00020567-exon-sc0000358-1575043694:92031..92067 | Clytia hemisphaerica | exon |
| TCONS_00020567-exon-sc0000358-1575043694:91735..91866 | TCONS_00020567-exon-sc0000358-1575043694:91735..91866 | Clytia hemisphaerica | exon |
| TCONS_00020567-exon-sc0000358-1510915933:92231..92454 | TCONS_00020567-exon-sc0000358-1510915933:92231..92454 | Clytia hemisphaerica | exon |
| TCONS_00020567-exon-sc0000358-1510915933:92031..92067 | TCONS_00020567-exon-sc0000358-1510915933:92031..92067 | Clytia hemisphaerica | exon |
| TCONS_00020567-exon-sc0000358-1510915933:91735..91866 | TCONS_00020567-exon-sc0000358-1510915933:91735..91866 | Clytia hemisphaerica | exon |
| TCONS_00020567-exon-sc0000358-1491911889:92231..92454 | TCONS_00020567-exon-sc0000358-1491911889:92231..92454 | Clytia hemisphaerica | exon |
| TCONS_00020567-exon-sc0000358-1491911889:92031..92067 | TCONS_00020567-exon-sc0000358-1491911889:92031..92067 | Clytia hemisphaerica | exon |
| TCONS_00020567-exon-sc0000358-1491911889:91735..91866 | TCONS_00020567-exon-sc0000358-1491911889:91735..91866 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000358 | supercontig | sc0000358:91735..92454 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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