TCONS_00020585 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020585
Unique NameTCONS_00020585
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length172

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020585 ID=TCONS_00020585|Name=TCONS_00020585|organism=Clytia hemisphaerica|type=transcript|length=172bp
GACAATTGCTCCTGCATTTTATCACACTCAATTGGATCTATCCAGACCAT
ACCAATGATATGCACCGCAACACAAGAGAACCACTGTGAAAATCTGGCTG
ATCGTGTTCTGTTGTTGTTCCACGACAGCAACAAAGATTTACATCATGGA
TGACTACACCACCACATCATTC
Run BLAST on NCBI

transcript from alignment at sc0000358:287043..287214

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020585 ID=TCONS_00020585|Name=TCONS_00020585|organism=Clytia hemisphaerica|type=transcript|length=172bp|location=Sequence derived from alignment at sc0000358:287043..287214 (Clytia hemisphaerica)
GAATGATGTGGTGGTGTAGTCATCCATGATGTAAATCTTTGTTGCTGTCG
TGGAACAACAACAGAACACGATCAGCCAGATTTTCACAGTGGTTCTCTTG
TGTTGCGGTGCATATCATTGGTATGGTCTGGATAGATCCAATTGAGTGTG
ATAAAATGCAGGAGCAATTGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011558XLOC_011558Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020585-exon-sc0000358-1491911889:287043..287214TCONS_00020585-exon-sc0000358-1491911889:287043..287214Clytia hemisphaericaexon
TCONS_00020585-exon-sc0000358-1510915933:287043..287214TCONS_00020585-exon-sc0000358-1510915933:287043..287214Clytia hemisphaericaexon
TCONS_00020585-exon-sc0000358-1575043694:287043..287214TCONS_00020585-exon-sc0000358-1575043694:287043..287214Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000358supercontigsc0000358:287043..287214 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020585 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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