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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020607 ID=TCONS_00020607|Name=TCONS_00020607|organism=Clytia hemisphaerica|type=transcript|length=1175bp
AGGATCCTGATGAGGGTGCATCAGACATCAACAATCACAGTAGCGGTGCA
AATTCATACAATGTCAGCACGCATGCGTCAGATGTTGCAGCAGATTTGCC
TTCAGAAGATGCCGAGCGGCACCCCGTTATACCAACAGAACAGACGAACG
GTGAAACAGGTGCGGAAGAAACGCTCATCGGAACCATCCCTTCACCTACG
GAACCATCCTTTGAAGCAACGGAAGATGGCCGACACTCACCCAAAAAGAC
GTCGTCCGTCAGTAATTTCTTAAACGGCAATATGGGGCAGGATGAGGCGC
GAGAGAAAATCAAGAACGCCTTCAAACATGGCATACCAAACTTGGGAACA
CGCTCTTTGAGCAAAGCGTCCGATTTGTTCCGTAAAAAGAAGAAAGGTAA
AAACCGGTCGCATCGCCATCAACATTCCGTCCACTTGACTGTTCCAAATG
ATGGTGGGGAAACAACCACCGACTTTGAGGAAGGAGATTCAGACGCTTCC
ACAGACAACCGACTGGATGAAGGTCAGTTAACAATCTGTTACTGGGTTGA
GTTTAATCGACTAACAATTTGCATTTCTCTGATCTGTAGCGTTATAGtta
ggctgcgcgcatccccagaatttattttgttataggggatgcgtatcgtg
tatgaaattctcgtccgagaattacctcaaatttggggtaaccaagattt
gcataaatttacataatttcgtcacatccaatcaaagaaagaaaaaaatg
aagtcattgtgctgttgtttttataattatcaattttcattcattgaaca
aagaaaaaaagaagtcattgtattgctatgacgcataatcaaaaaagaaa
aaagaaaagacgggNACACCCCGTTATACCAACAGAACAGACGAACGGTG
AAACAGGCGCGGAAGAAACGCTCATCGGAACTATCCCTTCACCTACGGAA
CCATCCTTTGAAGCAACGGAAGATGGCCGACACTCACCCAAAAAGACGTC
GTCCGTCAGTAATTTCTTAAACGGNAAAGTtgggacagaaatattttaga
cgatacgcatcccctatatcaaatcatatcagaggggatgcgtgcagcct
ataTTATAGTAGGCCTGTGTAAGAGTCACCATTCGAAACCCTTTCGGTAT
AGCCTCTTGTAAGTCTATAATGGAG Run BLAST on NCBI transcript from alignment at sc0000359:137726..138900+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020607 ID=TCONS_00020607|Name=TCONS_00020607|organism=Clytia hemisphaerica|type=transcript|length=1175bp|location=Sequence derived from alignment at sc0000359:137726..138900+ (Clytia hemisphaerica)
AGGATCCTGATGAGGGTGCATCAGACATCAACAATCACAGTAGCGGTGCA
AATTCATACAATGTCAGCACGCATGCGTCAGATGTTGCAGCAGATTTGCC
TTCAGAAGATGCCGAGCGGCACCCCGTTATACCAACAGAACAGACGAACG
GTGAAACAGGTGCGGAAGAAACGCTCATCGGAACCATCCCTTCACCTACG
GAACCATCCTTTGAAGCAACGGAAGATGGCCGACACTCACCCAAAAAGAC
GTCGTCCGTCAGTAATTTCTTAAACGGCAATATGGGGCAGGATGAGGCGC
GAGAGAAAATCAAGAACGCCTTCAAACATGGCATACCAAACTTGGGAACA
CGCTCTTTGAGCAAAGCGTCCGATTTGTTCCGTAAAAAGAAGAAAGGTAA
AAACCGGTCGCATCGCCATCAACATTCCGTCCACTTGACTGTTCCAAATG
ATGGTGGGGAAACAACCACCGACTTTGAGGAAGGAGATTCAGACGCTTCC
ACAGACAACCGACTGGATGAAGGTCAGTTAACAATCTGTTACTGGGTTGA
GTTTAATCGACTAACAATTTGCATTTCTCTGATCTGTAGCGTTATAGtta
ggctgcgcgcatccccagaatttattttgttataggggatgcgtatcgtg
tatgaaattctcgtccgagaattacctcaaatttggggtaaccaagattt
gcataaatttacataatttcgtcacatccaatcaaagaaagaaaaaaatg
aagtcattgtgctgttgtttttataattatcaattttcattcattgaaca
aagaaaaaaagaagtcattgtattgctatgacgcataatcaaaaaagaaa
aaagaaaagacgggNACACCCCGTTATACCAACAGAACAGACGAACGGTG
AAACAGGCGCGGAAGAAACGCTCATCGGAACTATCCCTTCACCTACGGAA
CCATCCTTTGAAGCAACGGAAGATGGCCGACACTCACCCAAAAAGACGTC
GTCCGTCAGTAATTTCTTAAACGGNAAAGTtgggacagaaatattttaga
cgatacgcatcccctatatcaaatcatatcagaggggatgcgtgcagcct
ataTTATAGTAGGCCTGTGTAAGAGTCACCATTCGAAACCCTTTCGGTAT
AGCCTCTTGTAAGTCTATAATGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020607-exon-sc0000359-1491911889:137726..138900 | TCONS_00020607-exon-sc0000359-1491911889:137726..138900 | Clytia hemisphaerica | exon |
| TCONS_00020607-exon-sc0000359-1510915933:137726..138900 | TCONS_00020607-exon-sc0000359-1510915933:137726..138900 | Clytia hemisphaerica | exon |
| TCONS_00020607-exon-sc0000359-1575043694:137726..138900 | TCONS_00020607-exon-sc0000359-1575043694:137726..138900 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000359 | supercontig | sc0000359:137726..138900 + |
Blast
The following BLAST results are available for this feature:
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