TCONS_00020693 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020693
Unique NameTCONS_00020693
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2119

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020693 ID=TCONS_00020693|Name=TCONS_00020693|organism=Clytia hemisphaerica|type=transcript|length=2119bp
caggaatgaaaatataagaaataaaaCATGAGAATATAAattaaaaggaa
taaaaaaatgAGGACAGTGCGCGTATCTTGGAAGAAAGTGGTCCCACTTG
GATTGCTTGCTTTGGTGATCATCTACTTTGTTGGGCCGTCATTTCTACCC
ACTAAAAACACATTGGCATATGagttgaaacaatcaaaattggAACAACG
TGAAAAACCAACTTTTAATGAGGATGGCTCATTggggaattttgaaaaga
aagaagcaTCTCGAAGTGGACCTGGTGAAATGGGAAAACCCCATCGTTTA
AAACCAGAACAAAAGAGTGAGGAAGACAGACTGAAAGgtGTTTACGGTTT
CAACCAGTTGGTTTCTGACGAAATTTCATTGGATCGAAGTGTACCTGACA
TGCGCGAAAAAGAATGTAAACATTGGAATTATCCCAAAGATCTTCCAACG
GCTtctgtcattttcattttccataaCGAGGGATGGAGTACCTTGTTGAG
ATCTGTACATTCCGTTATTAACagAACACCTGCACAGTTTTTACACGAAA
TTGTTTTGGTGGATGACAAATCCGAAATGCAACATTTACACGAACCGTTA
GATGAAGaattaaaaaaacctttttatcaatcgaaagtgaaagtggttcG
CAACAAAGAACGTGAAGGGTTGATCAGAGCCCGAAATAATGGAGCTATAG
CTGCCTCAGGTGAAGTACTTGTCTTTATGGACGCTCACTGCGAAGTGGGG
CCAAACTGGTTACCACCCATATTGGCGCCCATTTATGAGAATCCACGAAC
TCTTTCCGTACCTGTTATTGATGGTATACAGTGGAGTGATTTTTCTATCA
ACCCTGTTTACGCCGAAGGAGCTCATTCAAGAgGTATCTTCGAATGGGGT
ATGTTGTACAAAGAAGGACCTCTACCCGAGAAAGAAGCTAAAAAACGAAG
TCGTCATTCCGAACCTTACAATGCTCCAACACACGCTGGTGGTTTGTTCG
CTATTCGTAGAGATTGGTTCAAAGAGTTGGGATGGTATGATCCAGGTTTA
CTGATTTGGGGTGGAGAGAACTACGAGTTGGCTTTCAAGCTATGGCAATG
TGGAGGACGTTCAGTGTGGGTGCCCTGCTCACGCATAGGTCACGTTTATC
GTGGTCATTCATGCTCTTCGTGTCATTCAGGTGATTTGGGTAAAAAATGG
GGAAATTACCCTCTGGCATTACGTAATTATAAGCGTTTGATCGAAGTTTG
GTTTGATGATAAATATAAGGAATTTTTCTACACGCGTGAACCCTTGGCAC
GATTTATCGATCACGGAGATATTTCTGAACAGTTAGCTTTGAAGAAACGA
ATGAATTGTAAATCTTTCACTTGGTTCATGAAAGAAGTTgcatatgatgt
tttattcaaGTTTCCCGAACTGCCTCCGAACAAACACTGGGGTGAAATCA
AAAACGCTGAAAACGGCCAATGTATCGATACTCAAAATCATGCACCACCT
GGTGAAATTGGAACATCTGGTTGTCACGGTCTTGGTGGACCGCAATTGTT
CCGGCTGAACACAAAAGGACAACTCACTTCAGGAGAATGGTGCATTGTCC
ATGCtccaaatttccaaaaaggACATAAGGAATTCCACCTGATTGTGAGT
CGCTGTAAATATGGTTCTGTTAACGGTCCGTGGTCATACGATGAAGAAAC
GCTTTTCTTGAAGAATAATGAAGAGAATAAATGTGTAGCTGTAGACAGTG
TGACCAGGAAACTTGTTATGGAGCGCTGTAATCACCAAAAGATCAATCAA
CAATGGAAATTTAGCGAAATTAAACCACATCGGAAAACTAATTTCTAATA
ATTGGTTGCGCGGTAGCAGCAAACAGGGGTGGTTGGTTAGATCAAACTCT
CTAAAAAGGTCAAATATTCTTGGACCTCCTGCTAGAATTTCTCATTTGGG
AACACCTCGAAATGTTTGTCCAACCCCATGGATAGATATGCAATGCCCCA
TTTGTAGCCTTTGAAAACTGAAACTCAGGTTATATTTGTATCATCGAAAC
GTTGCGGAAAATCAGGTATTACTTTTAAATATACAAAGTTGAAATTTCGA
TGAGGAGCTTAAGTAAGAT
Run BLAST on NCBI

transcript from alignment at sc0000363:158286..174360-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020693 ID=TCONS_00020693|Name=TCONS_00020693|organism=Clytia hemisphaerica|type=transcript|length=16075bp|location=Sequence derived from alignment at sc0000363:158286..174360- (Clytia hemisphaerica)
CAGGAATGAAAATATAAGAAATAAAACATGAGAATATAAATTAAAAGGAA
TAAAAAAATGAGGACAGTGCGCGTATCTTGGAAGAAAGTGGTCCCACTTG
GATTGCTTGCTTTGGTGATCATCTACTTTGTTGGGCCGTCATTTCTACCC
ACTAAAAACACATTGGCATATGAGTTGAAACAATCAAAATTGGAACAACG
TGAAAAACCAACTTTTAATGAGGATGGCTCATTGGGGAATTTTGAAAAGA
AAGAAGCATCTCGAAGTGGACCTGGTGAAATGGGAAAACCCCATCGTTTA
AAACCAGAACAAAAGAGTGAGGAAGACAGACTGAAAGGTTAGTGTTATTT
TCAATATTATTGTTTCCCTACCAGGTTCATAACTGGTTAATTAAAGGGAA
CTATTAGGGAGACATATTTATAGTAAACCTCTCAAGCTTTTTAGAAAATT
CCTTTTTATGATCAATTTTAAAGGCTTGCTTGGGGACACGAGAAGTTTTC
TTCGCGTTGGTGCAATGCAACATGCTCCATCCCACCAACCTGAAATTTCT
TTTGATAACATTTGTGTTTCTCTCACTCAACAACCAGCGTGTCTTTTGGG
TATTTCCCTCACTTTTTGTCCCATGAAACAAAACAAAAAACATGAGACAC
GCGCTTTTTTTCTTGTGTTGGTGGGATGGAGCATGTTTCATTGCACCAAC
GCTAAAAAACTTCTCGTGTCCCCAAGCCTTAAGGAAGAAATTTTCGCGGA
AAGAAAATAATGGCAGATTTTGCGGATTTGTCTAAAATTCGTTTTTTTCG
GCCATCCGCTAAATCAAATTCTCGCCAAATTAATTTCTCGCCAAATTAAT
TTTATGTCCGATTTTTCACAATTTACGAAGGCGATCTCAATGTTTTCACC
CTGATTTTGGATCTAAAATTCCGTCATCCGCCAATTAAATTCCCACCAAA
TTAGCTTTTTCCCTGATCCGCCAAATTAAATTCTCCCTATGAGAAAACTT
TTTCAGCCAAACTAAATCCCCGCCAAAATTTCTTCCCTAAAGGTAGAAAG
AAGGCGTTTCTCTTATGCTGACAAAGTAGAATAAACCATAGGATTTCCAA
AAAGTTGAGCTCGCCTTTTCCGGAATGTTCTGTAAACAAATCGTAGGAGA
TGGGTTAAAGTTAAATGATGTCCTTTGATGGCTTATATACTGTATTTGTA
TTATATTTACACAGCACCTCACCCCTCACCCCATGAAAATTGGAAGTCTC
TCTAGATTCGAGGAGCCTAAGACAGCAATGATGAAAATTGCGCTATTATG
GATATTCAAACTCATGAAATTATTTTTCAGGTGTTTACGGTTTCAACCAG
TTGGTTTCTGACGAAATTTCATTGGATCGAAGTGTACCTGACATGCGCGA
AAAAGAATGTAAACATTGGAATTATCCCAAAGATCTTCCAACGGCTTCTG
TCATTTTCATTTTCCATAACGAGGGATGGAGTACCTTGTTGAGATCTGTA
CATTCCGTTATTAACAGGTACACTCTTTTTTTATGAGAACCGGTTACTAC
TTGTTAGAGCTTAAACAGCCCCAAGCTTGTCTTATCTTTTTAGCAATACG
AGTCTAAAATCTTTCTAATCTTGTTCTTATTCTTAGGGCAAAACTGTAGG
TGGTTAAGGTTTCCTTCTTTTTTTCTAATTTGACCTTTCATTAGCTTAAA
ACTCAGTTTTTCAAGATCTTTACTATCTTTCTAAGTATCAATATTAACTG
CTACCCCTGGCCAGTCCCAAATCTGAAGAAAAAAACTAAATACTGTATTA
GGTTTTTGTATTTTTATCGCACATACTGCTCCTGAAGCCTATGTCTACGC
TATATTACTTTCACAGATTCTCAATTTATCTTTTTTTCAACTTCAGAACA
CCTGCACAGTTTTTACACGAAATTGTTTTGGTGGATGACAAATCCGAAAT
GCAACATTTACACGAACCGTTAGATGAAGAATTAAAAAAACCTTTTTATC
AATCGAAAGTGAAAGTGGTTCGCAACAAAGAACGTGAAGGGTTGATCAGA
GCCCGAAATAATGGAGCTATAGCTGCCTCAGGTATTACATGTTTTCTAAG
AATTTAACAGCCTTAGGTTCACTTAAAAACATTGTTTCCTCACTCACAGC
ACATAGAACCTTTTTTATTGAAGCTCACTTTTCTAAACTTCAGTTGAGCT
AGAAATTGAACACACCCTTCTCACAGACCCACTGGGACCCCTTCCCACTG
GAAAAAATGCCCAAAATATCGTCCCCGGTAGAAAATTATCCTCAAATTTT
TGTCCCTACTAAAAATGGTCAAATAGACTTACTATTTTTCCGATCCCCAC
TGAATTTCCTGACTTTAAACAAAAGAATTTAAATCCCCAGTCATAAAAAA
TAGGGGAATATCAATCCCTATCGAGTTTCAGTCCGTTAATTTTAGCCCCA
CTGGCTGAAGAAATCTTACCGGGTCTTTGAGAAGGGGGTGTTATTGAGAT
CTGTCTTTGGGGTACCCTGGAGACAGCGCTTTTTTATTAAAATTATTTCA
TACTTTCTCACTTGAATGTTTCAGGTGAAGTACTTGTCTTTATGGACGCT
CACTGCGAAGTGGGGCCAAACTGGTTACCACCCATATTGGCGCCCATTTA
TGAGAATCCACGAACTCTTTCCGTACCTGTTATTGATGGTATACAGTGGA
GTGATTTTTCTATCAACCCTGTTTACGCCGAAGGAGCTCATTCAAGAGGT
ATATTTTTTCTTATTATTTATAAAGTATTAATTTATTGACTTGAGATTGA
GTGTGTCAATAAATTCGAACCAATCAGGAATGAACATCATGTAACAAGCA
CATGAAAATTTCGAGTAAAAGCGTGGTTTGTCTTCAGACTTTAACTTTGC
AACCTGTGTATTAAGTACACAACTTGTGCTCTCCTTTAGTCTAGCAAGCT
AGACGACTAATTCGTACATAGTAGAAATAAAGCAAAAAAGTAAATTTAAG
TCGTCTAGAAACCTTTGTGCACTAACTCCAAACAAAAGAAAGTGTCAATA
TCGCAATTAAAATGTTTTCCCGCTCAAAAAAAATTCTTGAAAATAAAATG
TGTGTGGATTTATGTGTTAAAAGTTTTTCATTTAAATTGATTTTATTTTG
AGAGTTTGTTGTTACTTGATAGATTGTTTTCTCGCTACGCAAGTTTCTGC
GTAGCTAGCCCCGGTATCTATAAGGCTAGAACACCGGATTCTTCCAGTTG
TTTATACAAACTAAATCCCGTATCATTATTTATGTTTATTATTAGTATTA
CATGCATTATAAACGACTCCAGTCTAGCTCTCCTTATATGATTAGTGACA
AAAGTATCATTTTAGGTAAAATATTTGTTGTGGTTAGTTAAAGCCAGAGA
TAACTATATATTTCCTTATGACGTTTTCTCGATTTGTATTTTTCACCTCT
AATGTTTTCCTAGGTATCTTCGAATGGGGTATGTTGTACAAAGAAGGACC
TCTACCCGAGAAAGAAGCTAAAAAACGAAGTCGTCATTCCGAACCTTACA
ATGCTCCAACACACGCTGGTGGTTTGTTCGCTATTCGTAGAGATTGGTTC
AAAGAGTTGGGATGGTATGATCCAGGTAATTCTACTCACTTTTTGATCTT
TTACGATAATTTCATAATTTCATCCCCCCTATATGTGTATCCCCCTATTT
TAAAAAACCCGTGCTATTGACAGCAGCATTCCACCAGTCATTTAAAACCT
TTATTTATATTTAGCTATCTACACTTTAGTTGTCCGACACCAAATATGTA
AATCAATACAAATATGATAGATATTTTGACCAAAGGTTGACAACTTTTAA
CAACTCCCCCCCCCCTAAAATCTTAAACCCCAATTTTTTCGAAAAATCTC
CTATCCCCCCTATAAAGCATCTTTGGAAAAGTTGGATCCCCCTTTAAAAA
AAGGGGGTTCACACTATGAATTTTTTCGATCATGTTTTGCACGGTATCTT
TCGGTGCAGTGATTTTTCAACGCCATAGATCTTGAAAGCGATCTTGGTAA
TTTGATATTATTATTTTCGATATTCCTGAGTAGGCTGGTAGTACCTTCAA
AGGGCGCCACATGCACTGACGCCATTAATGCCAACTGAACTGATTTCTTT
CTAAGGTTACCACGTGCAATGACCTATGTTAAGATATATCCGCCTGATCT
CTGATCGGAGTACTCGACGTGGTGTTTTTTTAAGGTTTTTATCAAAGATT
TTGTGTGGCCGGAATCAAGGGTGTTCTTATAAAGCTCAGTGACCATATGG
GAACCTTCAATCCAATAAGAGTAATCTACTGTGCTTTTTTTAAGATCTGA
TTAGAATTTTTCCCTTTCTATTGTCATTCTTTCAAAGAAAGTCATAATAT
GAAGATCTCTCTTTTTTGGAGATTCCCAATATTTTCATTCCCGTCTAATC
TCCTTTACTTTTTACGATGCTAGGTTTACTCATTTGGGGAGGAGAGAACT
ACGAGTTGGCTTTCAAGCTATGGCAATGTGGAGGACGTTCAGTGTGGGTG
CCCTGTTCACGCATTGGTCACGTTTATCGTGGCCATTCGTGCTCATCGTG
TCATTCAGGGGATTTGGGTAAAAAATGGGGAAATTACCCTCTAGCATTAC
GTAATTATAAGCGTTTGATCGAAGTTTGGTTTGATGATAAATATAAGGAA
TTTTTCTACACGCGTGAACCGTTGGCACGATTTATCGATCACGGAGATAT
TTCTGAACAGTTGGCTTTGAAGAAACGAATGAATTGTAAATCTTTCACTT
GGTTCATGGAAGAAGTTGCATATGATGTTTTATTCAAGTATCCCGAACTT
CCTCCGAACAAACACTGGGGTGAAATCAAGAATATGGAAAACGGTCAATG
CATAGACACGTACAGTCGATCACCGCCCGGGCGGATTGGTATCTCTGGGT
GTCATGGTTGGGGCGGAAATCAGCTCATTCGTTTGAATAGTCAGGGTCAG
TTAGCCTCAGGTGAATGGTGTATCAAGCACATGCCGACCACCAATCCAAA
CGAAAACCACTTCGGAATGGCGTGGTGTGAACAAGGCTCTGTTGACGGAC
CCTGGCACTTTGAAGAAAACACAGGGCTCCTCAAAAATACACACGAAAAC
AAATGTGTCGCTATTGATCGAAATAATTTAAAGCTCGTTCTAACTGAGTG
TGATAAAAACAATAAACTACATCGCTGGGATTATCGTCCGCTTAAACCAA
AATGGCACAAGAACTTTTAAAATATAGTTTTTTAGATAGAAAAATGAGCT
CACATGGTTGTTGTTGAAAGACATAATATCTTTCCAATGTTTGAATATTA
TTTATTTTTTTTGAAAGAATTTCAAAAGTATTCAATATTTTAGTAGTGTT
TTAGACGTTTTTTATGTAAGGTGTTGGGTTTTTAGATAGAGCTTTGTTGC
TTTTAAATTGAGTGTGTGTCATTTTAAAAATTCTTAAATCGAATCGGTTC
TCTCCAGACCTGTTCGTTTCATATTTGAGGTCTTTTACAGAAGAAAAGAA
AATTTTTGAATGAGTACGTTATAAGTGCGCAGTGCTTGCTGATGTGTCCT
TATAAAGACGAAATACACGCTCACCTGCTCTGCCACCTAAATCTTCTGAT
TGAATATAGTTGGACAGAATATCTTATTTCTCCACTCATATATTTAATCA
AAGCCGCTTTACCCCCAGTCCGGGGGAGGAGACACTCAATTCAAATACGA
CCATACGTGCGGCCCGAAATTAGGCTTTTGAAATCGGAGGGAGTGTAGAG
ACAGTTTTGCAAAATTTGAGCAAATTTGAGCGAAAAATCGACGGTGCACT
GTCTTGAAATTTTTGAAACATTTTACACCCTAAGAGTTAAATTTTTCTCG
TCTTTGCTGGTTTCGACTCTTACAGTTCCCTTTGAGAAGCTTGGAAATAT
ACTGTTAAGGGTCGCATGTATGGTAGGTCATTTACCTTAAGAATCCCCAG
TAATCTATTGTCAAGTTTTAATTTCTTCTTACTTTTAGTAATTTTATACA
GTTTCAGTTCAACTTTTTCGCACTAATTATAATATAGTACTCTCTACTAA
ACTGATTCTTTAATTTAATTGTAGTAATTTTTTTTCCTTTCACTATTTCC
AATAATAGATATTTTAGGTATCATTCCCCAAATAAATTATAAATTTCTAA
CAAAATTTTCTGATCAAATAAACCTAACTTTACCTGATTAGACTGTTTGT
TTTGTTTTTTTTTCATTTTTGGGACCAAGCAAAATATCATTATAGTTTTT
GTACAGCCAAAATTTGTTGTAGAATTATTCCTGACTCCATCGCAATCTCT
ATCTCTGTCTGTAATTGTTGTATGTACTTAATGAGATTTAATTATTTAAT
TGTTTTTCGTACTTAATGACTTCCTATGATCATAAATGACGACACACTGA
GAGATATTCAAAAGTTCTTTTAATGTCAATTTTGTAAACGTGGAACGGAT
TTGTTTACATTTCGTGTTAAATATCTGGATCTAAACAGACGAAGTAAGAT
TTTGATTTCTAGGTTGATTTTAGTTATATGTTTTAATGATTTAAAGGTTT
TTGTTTTTAAATAATTCACGAGTTTTTTCACATTGGGTTGACACGGATGT
GGAGCAAGATTGGTCAAAAAGAGGACAAGAAAAACATTTTTTGCTTATAT
CAGCATAATATAACAATAGCAAGACCCTGTCCTGATATAAAATATATGTC
TGATATGAAACGGAAACACTTATGTAAAAATAAAATCTTTAAGCCTATTG
CAGAGTTTTAAAATCTGGATTTATATAAGAACTGCTGCTGGTATTTTCTA
AACATTTTATAGCCGATAGTTTTCATGTTTGTGTCTTATCCTTGCTGTCA
CAAAAGTCAAAACGTTAAACAAGCCACCCAACGCTGAAATTACCATTACA
GTATATGGCCCCCAAAACGGAGGCGGCCCCCAAAACGGAGGTTTTCATTA
AAATTAAGATTCTGATTTGTAGATTTATCAGAATTAAACGATTTTTGTTT
ATTTTGAAAGAATGATGGTTATACTTAAAAATGAGGATGTTTTTGCTGGT
TTGAGACAGATTCAAAATAACATATTTGCGTCTAAAAGAAATATTTTAAC
ACCAAAATTAGACAAAAATTGCATATAACTCACNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGTTTTTCGCTGAATCAGCAAAAACGGCAAATTCTGTCAT
TTTTTTGCAAAATATAGGAGAAAAATATCTTTAAAGCTTAATATTTTCAG
TTTCAGTTATGTTTTTTTTCTAAAATTTTGACAACTTATTCCATACATGA
ATGGAACTATTTTCAAAAGAGATTTGTTTTCAAAAACTTGATTAAGACGT
TGTTAAATCAAAATTGTCATTTTGAAAATATCTAAATTTTCAGTTTGGAC
TTTGCAATATCGGAAATCTTGAAATATTTCATAAAAATCATACCGTAAAT
TTTACATCCATCGGGTCGTAAATTTAAGGGAAAACACAAATATGTTCATA
GTTTTCCCCCTATTACCACCGGGCTTAATAATTAGATTTTAGCTACACCT
CCGTTTTGGGGGCCCCAAACCTGCATTTTGACAACCAGGGGTATACTGTA
AAAACAAAGGACAAAGGAAATATAGCTTATTAAGCATCCTCTATAAGGAG
CACCAATCCGTTAGTGGATGCCAGCAGCCTACCGTTTTTTTAAGCGATTG
AAAAATATTGTTTAAATTGAAAATTTTGAAAAATAACTTCCAGGAAATAA
AGTAGAGATGTTAAAGGTTTTCATGCAGCAAAAATTTTTGTAAAATATCT
TTTCCTCTAGATTTGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAAGGTTTTCATGCAGCAAAAATTTTTGTAAAATC
TCTTTTCCTCTAGATTTGAGAGAAATTTCAAATTTGATCGCCGTTTTGGG
GGCCACATACTGTAAAGACATTCATATAATGTCCGTAACTTCCTTATAAA
GTTAATGGGTTTTAATTTCTGACAAAATATCTAAAATATCTCCTAAGTTG
ACATCCGTGAAGAAATTTATATCTTTTAGAGAAGTCAGCAGGAAGAAAAG
ACACTTTTTTTTCTCAACTTCAGTTGAGCTAGAATCTGAGAATGTCTGTC
TGTGTGTCTGTGTGTCTGTCTGTCACTCTGTGTGTCTGTGTGTCTGTCAC
CAAAACTTTGGGGCAGGCTGGAGACTTCAAAATTGCTCTGATCGGGCTGA
AATTTTGCACACTTGATCCTTGGGCAAAACCCTGGGGGTGTTTTTTTTCA
TTTTTTCAAAATTTTAATTTTTGGGGTCTGGGGACGAGTTTTTCGCCAAA
ACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAATGGTCCAATT
TGGCTGAAATTTTGCACACTTGATCCTTGGGCAAATCCCTGGGGTTTTTT
TTTCACTTTTTCAAAATTTTAATTTTTGGGGTCTGGGGACGAGTTTTTCG
CCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAATGGTC
CGATTTGGCTGAAATTTTGCACACTTGATCCTTGGGCAAATCCCTGGGGT
TTTTTTCATTTTTTCAAAATTTTAATTTTTGGGGCCTGGGGACGAGTTTT
TCGCCAAAACGAGGCTAAAACCCAAAATACAAAAATTTTTCTTAAGCCAT
GAAGTTTACAATTGGGCCTACGAATGATTTCAAAGATACTGAAGTTGAGC
CAGTGCGGTTAGCACGTTCGACAGTTCTGCTACTGGCAGTTTCATGCCAC
TTTGGTGACAATCTTCAGGCAACTAAACTTGATTAACATTTAACTTTCTT
CCTGATTGACATAGCTCTACTTATGTATCGACCACTTCAAAAAAACTGAA
GAAATACTTAAGGGCTACTTAGACCGAAATGTACGGAGTGAACAACAGGT
CCGCTATTATAAAAAGAGATTTTCTTTCTGTAAACCATGGAGGTAATAAG
AAATAGATGGAGAATAAATGACTTTTATTTTATTGTACCTAATCATCGGA
AGCAAACGGCTCCTTGGTTGCAATGGGAAAAAGTGATTAATTTTGTGTGC
ACTCATGGGAATATTTAAGTTCATAAAAAACTGAATAAAAAGGTGTTGGA
TTTTTAACAGTTCTATTGTGAGATAATAGCTTAGTTGATCAAAATGAGAA
AAAGCTTGCCGGAACAAGCACAAAATCCTATATTTTTAAGGGCCCTCTCA
TAAAATCATCGATAAATTAAAAAAAAAATCTATATTACGATTAGGTAACC
TTTAAATTAATCATCCATCAGAATTTGAAAGCCCCCTCCCTTTTAGACGT
AAACATTTCTAATGAAGAAATTTTCAAGGAAAATGTGCTGAAACTCTCAA
AATTAGCAATATGTTTGCCCAAAAATACATCGATATGAAATCATAGAACT
ATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAACAATCCTCCTATATTG
TTGGAATATTGCAAATCGAGCTGACAATATATTGCGGACACCTTTTCAAT
ATATTGCCGGCATTCAGCGATATATTATCAATATATTGTGTAGTGTATTT
AGGCATTTACATATATTTTTTAGAGAATAATGAGAACAGTTTACATAACA
TGGCGGAGAGTTCTCCCCGCGGTTTGTTTTGTTTTTTTCATAATAATCCT
CTGTCTCGAATATCGATCAACCACTGTTGAACCTCACGACCTTATTGTCC
GAAAAAGCAATCATTTTCCCGGACAGTTGACGATGAAACAAAAAACAACT
TTTAATGAGGATGGCCAGTTTGGGAATTTTGAAGTTGATGAGAAACGACG
GAAGGGACCTGGTGAAGCCGGTAAACCTCATCGCTTAAGACCTGATCAAG
AAACTGAAGAAAACCGACTTAAAGGTACCTTACAATTTAATTATCAATCT
ATCCTCATAAAATTAATCTTAACAAATTGTTAATTTGAAAGGGTTTCTTC
GAGGTATGGTAGACTAAATTTCTCTNCCTCATAAAATTAATCTTAACAAA
TTGTTAATTTGAAAGGGTTTCTTCGACGTATGGTAGACTAAATTTCTCTC
ACCCAAACAAAATCCGTTGGAATACGGAAGAGATTAAGAAGGTAAATTCT
ATCAACAAATCCTAAAAATAACTATCACAATAGACCTTATGCATTGTGGG
ATAGTTTTGGGAGTATTACAATAGAATTCCCTCGAGGAATTTCTAAGAGA
TTTCTATTGTTTAGTCTTCAGACAAAAGCTATTTGACTTATTCAGCATCT
CTATTTCAGGTATTTACGGTTTCAACCAGCTGGTTTCTGACGAAATTTCA
TTTGATAGAAGTGTACCTGACATGCGTGAAAAAGAATGTAAACATTGGAA
TTATCCCAAAGATCTTCCAACGGCTTCTGTCATTTTCATTTTCCATAACG
AGGGGTGGAGTACTTTATTGAGATCTGTACATTCCGTTATTAACAGGTAT
AATGTCATGAAATCTTCTATCATGGCAGTGTTACAATAGAGTCACACGTC
ACATCTAACACTACGAGTTCCAGGCTGAATAATGTTCAAGCCTGCCAGTG
CGTCTATACAGTGTAGCCTGGAAAACTAAGCTAGTTTGATTCAATCATTA
GGATAAATCTGATGGTAAGTTGTGACTGAATAACTATTCAAAGGCAAACT
TAAAATCAGTGTTACAATAGAGTCACACGTCACATCTAACACTACGAGTT
CCAGGCTGAATAATGTTCAAGCCTGCCAGTGCGTCCATCCCCACAGTGAA
GCCTAGAAATCTAAGCTAGTTTGATTCAGTCACCAGGATAAATCTGATGG
TAAGTTGTGACTGAATAACTATTCAAAGGCAAACTTAAAATCCGTAAATA
TGAAAAAATCTTTAAAGCACCGAAAATGCTATATTGCCATTAGCCGTGTG
TCCTAGCCTTGTGAATACGGGCTTAGTTAACTAGGCTACATACAGTGATG
TATTTAACGTCACTTACATTGTATAGCATTATGGGTATTAGAACTCTAAC
TATGTTTCCTTATCTTTCAGAACACCTGCACAGTTTTTACACGAAATTGT
TCTGGTGGATGACAAATCTGAAATGCAACATTTACACGAACCTTTAGATG
AAGAATTAAAAAAACCTTTTTATCAATCGAAAGTGAAAGTGGTTCGCAAC
AAAGAACGTGAAGGGTTGATCAGAGCCAGAAATAATGGAGCAGTTATCGC
TTCAGGTTTCATTTTTTTTACTTTTGCTCTAATCTTTCATGAGAAAACAT
GTTAAGCTGGCTGTTATACTCTAGCACTCTTCAAAAAACCTTAAGTGCTC
AGTCATTCAGAAAAGGAAAACGATAGTTCACCTGAATAGGCTATAATCAA
TTAAAAGTGACTGGGCTGGTACTAGCCTAGAAATCTAAGCCAGATTGATT
CAGTCACTTAGTAAAATCTGATGGTAAATTGTTACTGAATATTCCGTACA
TCATAAAAAGCACCGATAACGCTTTATTGTCTTCAGCCGTATCTTGTAAA
AAGTGGCTTGGTTAACCAGGCTAGGCTGGCACTTGAAACCTTTGAATATC
TTGCGAAATTTACAACCCTTTTTGTCTTTTTTGTGAGTATCGATCCCGAA
TTTGTTTTTACCTGCAACTGTTGCACTTTTATAATAAGCAACCAAGTTGC
TTGGGCTCGAGAACTCAAAATTCCAATTTTTTTGCAATCTCGTAAAGCAA
AACCTTTTTAGACAATCTAACGAATGTTAGGAGTTAGTCAAAGCAATTTT
TCTACATAATGAGCTAGAATCCTAGGCAACCCCAGGGATGACCCAGAAAT
TGGAGCTGCTTATAAAAAAATGTGTAATTCATTATATGTATTCTTATTTT
TCAGGTGAAGTTTTAGTGTTCCTTGATGCGCACATAGAAGTTGGCTTGAA
CTNTCAGGTGAAGTTTTAGTGTTCCTTGATGCGCACATAGAAGTTGGCTT
GAACTGGCTGCCACCTTTACTAGGACCAATATATGAAAATCCAAGAACTC
TTTCCGTTCCCATTATCGATGGGATCAGATGGGATGATTTTGCTTTGTAC
TCAAACTATGGAAATGGATATTCCAGAGGTATCATCGTAATTTCGAATTT
CGGAACAGGAAAAACACTCACTAACGAATTACGAATCCTAAGCGAAAGCT
AAAGAATATTATCTATAATTATCTACGGCTCTTGAAAGCATTTTTGGTCA
TTTCGAGATAAATGTGACATGGTAACTATTCCCAGGTCACTGTAGTCTGT
ACACAGACCCGATGTCTACGGCTAACTTCAAAATTCATTGCCGTGAAGAT
GGTCTGTTGTCATTGTCTTTTCTGATTTGAGATTTTTCAAACCGACCGCT
GCGAAGGAGTGTTGGTAAGAGAGGGGAGACGACGAGAGAAGCGTTGCTAT
TAACAAATCTTACTTCATCGCAAAGGTTTCCATTTTTCCACGGGGATTTT
TTTATCAAACAGACAATGCGTACAGAGTGTACTACAACGATAAGCGTGAG
ATACACTCTGGATCTGGTACAGAGTAAATTCACTGCCACTGTTTCTTTGC
TCTTATGGTGGAAACCTAAATTATGTTTTTATAGATCAAGAATGTTTGCT
TTCATATAATACTGGGCTAAAGTTTTTCCTATTATTGTTGTTTTTAGGAT
TATTCGAGTGGGGCATGTTATACAAAGAGGGTCCATTACCTGAAAAGGAG
AAAAACAAAAGACAGCGAAAAAGCGAACCTTTCGATTCGCCAACACATGC
AGGTGGCTTGTTCGCTATTCGTAGAGATTGGTTCAAAGAGTTGGGATGGT
ATGATCCAGGTAATTCCATTCACTTTTTGACCTTTTACCGATAATTTCCA
TACTGCAGACAGCTAGAATTTCTTTGAATAAATAGTTTTTTTTATGTATA
CAAAAATCCAAAAGTTGGCTCGGAAATGCTTAGATGGAGAGATTTACAAA
GCTGAAAAATGCTTTGAGGGGTGCGAAATCCTAATCAAAATTTTAGAGAA
ATTTCGAAAATCCAACCAAAAACAAACAAATTCTGAAAATGAAGGCTCAA
AGTAATGTTTAGCATATGCTTAAATTTTTGCCATATATGAGCCTAGATAT
GCTTATCAGCGCAATGCTTATAAAAAAAACATGTACATGATCAGGGGTTC
CACTTGGGGCCTTCATCAGGGACAATGTTAAAGATGCTGGACCATGTAAA
TGTTTTCTTTACTCTCAATACTTTTGTTCAACGTTTTGTATTTTCTTTCA
GGTTTACTGATTTGGGGTGGAGAGAACTACGAGTTGGCTTTCAAGCTATG
GCAATGTGGAGGACGTTCAGTGTGGGTGCCCTGCTCACGCATAGGTCACG
TTTATCGTGGTCATTCATGCTCTTCGTGTCATTCAGGTGATTTGGGTAAA
AAATGGGGAAATTACCCTCTGGCATTACGTAATTATAAGCGTTTGATCGA
AGTTTGGTTTGATGATAAATATAAGGAATTTTTCTACACGCGTGAACCCT
TGGCACGATTTATCGATCACGGAGATATTTCTGAACAGTTAGCTTTGAAG
AAACGAATGAATTGTAAATCTTTCACTTGGTTCATGAAAGAAGTTGCATA
TGATGTTTTATTCAAGTTTCCCGAACTGCCTCCGAACAAACACTGGGGTG
AAATCAAAAACGCTGAAAACGGCCAATGTATCGATACTCAAAATCATGCA
CCACCTGGTGAAATTGGAACATCTGGTTGTCACGGTCTTGGTGGACCGCA
ATTGTTCCGGCTGAACACAAAAGGACAACTCACTTCAGGAGAATGGTGCA
TTGTCCATGCTCCAAATTTCCAAAAAGGACATAAGGAATTCCACCTGATT
GTGAGTCGCTGTAAATATGGTTCTGTTAACGGTCCGTGGTCATACGATGA
AGAAACGCTTTTCTTGAAGAATAATGAAGAGAATAAATGTGTAGCTGTAG
ACAGTGTGACCAGGAAACTTGTTATGGAGCGCTGTAATCACCAAAAGATC
AATCAACAATGGAAATTTAGCGAAATTAAACCACATCGGAAAACTAATTT
CTAATAATTGGTTGCGCGGTAGCAGCAAACAGGGGTGGTTGGTTAGATCA
AACTCTCTAAAAAGGTCAAATATTCTTGGACCTCCTGCTAGAATTTCTCA
TTTGGGAACACCTCGAAATGTTTGTCCAACCCCATGGATAGATATGCAAT
GCCCCATTTGTAGCCTTTGAAAACTGAAACTCAGGTTATATTTGTATCAT
CGAAACGTTGCGGAAAATCAGGTATTACTTTTAAATATACAAAGTTGAAA
TTTCGATGAGGAGCTTAAGTAAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011609XLOC_011609Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020693-exon-sc0000363-1575043694:174024..174360TCONS_00020693-exon-sc0000363-1575043694:174024..174360Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1575043694:172844..173030TCONS_00020693-exon-sc0000363-1575043694:172844..173030Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1575043694:172280..172464TCONS_00020693-exon-sc0000363-1575043694:172280..172464Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1575043694:171613..171786TCONS_00020693-exon-sc0000363-1575043694:171613..171786Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1575043694:170736..170897TCONS_00020693-exon-sc0000363-1575043694:170736..170897Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1575043694:158286..159359TCONS_00020693-exon-sc0000363-1575043694:158286..159359Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1510915933:174024..174360TCONS_00020693-exon-sc0000363-1510915933:174024..174360Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1510915933:172844..173030TCONS_00020693-exon-sc0000363-1510915933:172844..173030Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1510915933:172280..172464TCONS_00020693-exon-sc0000363-1510915933:172280..172464Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1510915933:171613..171786TCONS_00020693-exon-sc0000363-1510915933:171613..171786Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1510915933:170736..170897TCONS_00020693-exon-sc0000363-1510915933:170736..170897Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1510915933:158286..159359TCONS_00020693-exon-sc0000363-1510915933:158286..159359Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1491911889:174024..174360TCONS_00020693-exon-sc0000363-1491911889:174024..174360Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1491911889:172844..173030TCONS_00020693-exon-sc0000363-1491911889:172844..173030Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1491911889:172280..172464TCONS_00020693-exon-sc0000363-1491911889:172280..172464Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1491911889:171613..171786TCONS_00020693-exon-sc0000363-1491911889:171613..171786Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1491911889:170736..170897TCONS_00020693-exon-sc0000363-1491911889:170736..170897Clytia hemisphaericaexon
TCONS_00020693-exon-sc0000363-1491911889:158286..159359TCONS_00020693-exon-sc0000363-1491911889:158286..159359Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000363supercontigsc0000363:158286..174360 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.45845	7.00828	6.75147	7.21091	7.17976	5.26003	11.9255	11.0794	10.3516	12.5958	6.0571	8.00537	5.77698	5.89247	13.5006	12.1951	9.98145	8.73027	5.73621	9.37772	4.58877	3.90516	9.31974	9.83311	1.60085	2.08288	3.90516	2.9363	7.36646	7.08855
Blast
[Close]
BLAST of TCONS_00020693 vs. Swiss-Prot (Human)
Match: GALT7 (N-acetylgalactosaminyltransferase 7 OS=Homo sapiens GN=GALNT7 PE=1 SV=1)

HSP 1 Score: 444.121 bits (1141), Expect = 1.263e-145
Identity = 233/539 (43.23%), Postives = 329/539 (61.04%), Query Frame = 1 
Query:  226 GSLGNFEKKE----ASRSGPGEMGKPHRLKPEQKSEEDRLKGVYGFNQLVSDEISLDRSVPDMREKECKHWNYPKDLPTASVIFIFHNEGWSTLLRSVHSVINRTPAQFLHEIVLVDDKSEMQHLHEPLDEELKKPFYQSKVKVVRNKEREGLIRARNNGAIAAS-GEVLVFMDAHCEVGPNWLPPILAPIYENPRTLSVPVIDGIQWSDFSINPVYA--EGAHSRGIFEWGMLYKEGPLPEKEAKKRSRHSEPYNAPTHAGGLFAIRRDWFKELGWYDPGLLIWGGENYELAFKLWQCGGRSVWVPCSRIGHVYRGHSCSSCHSGDLGKKWGNYPLALRNYKRLIEVWFDDKYKEFFYTREPLARFIDHGDISEQLALKKRMNCKSFTWFMKEVAYDVLFKFPELPPNKHWGEIKNAENGQCIDTQNHAPPGEIGTSGCHGLGGPQLFRLNTKGQLTSGEWCIVHAPNFQKGHKEFHLIVSRCKYGSVNGPWSYDEETLFLKNNEENKCVAVDSVTRKLVMERCNHQKINQQWKFSEI 1821
            G LGNFE KE        GPGE  KP  L PE K         +GFN + SD ISLDRSV D+R++ECK+W+Y ++L T+SV+ +FHNEGWSTL+R+VHSVI RTP ++L EIVL+DD S  +HL E LDE +K   +   VKV RN+ REGLI+AR+ GA  A  G+VL+++DAHCEV  NW  P++API ++    +VP+ID I  + + I P     E  ++RG ++W ML+K  PL  +E + R   +EPY +P  AGGLFAI R++F ELG YDPGL IWGGEN+E+++K+WQCGG+ ++VPCSR+GH+YR         G+    +      L+NY R++EVW+D+ YK++FY   P ++ + +GDISE    ++  NCKSF WFM+E+AYD+   +P  P N  WGEI+  E   CID+      G +    CH +GG QLFR+N   QL   + C+       KG     ++++ C        W Y +      +    KC+    V  ++ +  C+  K  Q+W+ + I
Sbjct:  130 GILGNFEPKEPEPPGVVGGPGEKAKPLVLGPEFKQAIQASIKEFGFNMVASDMISLDRSVNDLRQEECKYWHYDENLLTSSVVIVFHNEGWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLKEKLDEYIK--LWNGLVKVFRNERREGLIQARSIGAQKAKLGQVLIYLDAHCEVAVNWYAPLVAPISKDRTICTVPLIDVINGNTYEIIPQGGGDEDGYARGAWDWSMLWKRVPLTPQEKRLRKTKTEPYRSPAMAGGLFAIEREFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHIYRLEGW----QGNPPPIYVGSSPTLKNYVRVVEVWWDE-YKDYFYASRPESQALPYGDISELKKFREDHNCKSFKWFMEEIAYDITSHYPLPPKNVDWGEIRGFETAYCIDSMGKTNGGFVELGPCHRMGGNQLFRINEANQLMQYDQCLT------KGADGSKVMITHCNLNEFK-EWQYFKNLHRFTHIPSGKCLDRSEVLHQVFISNCDSSKTTQKWEMNNI 654
The following BLAST results are available for this feature:
BLAST of TCONS_00020693 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GALT71.263e-14543.23N-acetylgalactosaminyltransferase 7 OS=Homo sapien... [more]
back to top