TCONS_00020762 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020762
Unique NameTCONS_00020762
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2567

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020762 ID=TCONS_00020762|Name=TCONS_00020762|organism=Clytia hemisphaerica|type=transcript|length=2567bp
tcgactcgatactttaattagggacaccctgtataagtaGAGTACTCTAT
GAGTGAAATCACTCTGTGTGTCTGATTTATATACAAAAATATATCCAAAA
AATTTAAGgtgTCGAATATTTAATGCAGCAGGATGACATCCGAAGAAATT
AAAGAAGTGAAAAACATCGGTTCTTGGTTCCGTCTCAAAAATCTAATTGG
TCTAAAAAATAATGGTAGATCTTTCTTATATGATTTACTAAAAAGTCAAG
AAGACACAGTTTTTAAGTTGTATATGGGTGAAGAAACAACATATGCTTCC
GATTATGTGTCAGCTAAGTATTTATACGAAGAAGAGTACGTCTTTAGAGA
GCCGTTcattggaaaatattttaacacaaATATGCTTGGAGGACGTAAAC
CATCTATGTTTTGCAACGGTGAggatcacgccacgaaaaaagCTGACACA
ATGAAAGTGTTAGAGTACCGTAtggaaaaaataagtttgaaagATTTGAA
TGATGTCATCGAATCGGAAATGAAAGCGATTGATGTTACCAAGGGAAAAG
GAAACAATTTCGAGGCTTGTCTTGAAAATGTTGCGAAATGCGTGGCAGAT
TCGCTTATTCTTGGTAAAAGTCTCCACAATCGTGATGACTGGAAAGATTG
GTTTGATAGCTCTTTGAAGATGTTTAATTTCCATCCATGGAACTTTGGAG
AAGCAGCAGACAGAGACAGATGTTTGAATGCAATGAAACAGACACCAACT
GTTCAAAACCTTGATAAAATCCTTCCCGAAACCACTCAAACAATGGAAGG
GGAAACTTTTGAATTAATGCACAATGTTCATTTCAACTGTACACCTGTAC
TATCATGGTTAATGATCTCCTGTATTGCTCGCTTCACCGATTCATTAACT
GAGGATGAACGACAAAGTTTGAGGGACGAAGCATCTCTTTTGTTTCGAGA
AGAAACAGACTCGACTTTTGAAGAACGACTGAGCAAGTCGGAGAAGATTG
ATACTTTTATTTTGGAGATTATACGTTTGAACACACCTCATCTAGCTGgt
acttaTGGAAGAGCCAGGAAAGATTTTGTAATGGAATCCAAAACAGGGCG
ATATCAAATCCATAAAGATGATTTACTGTGTACTTTCGTCTACGCCATTC
ATCGAGATGAAGAAGTTTTTGAGGAtcctttcaaattgaaaatgacCCGT
GATAGGAAGATTATCGAGAATCAAAATGTGTGTTTTGGGTCTCCTCTTGT
CATGGAACCTACAGCCAACAATCATAAATGTCCAGCTGCTAGAGTTATGA
TCAATGTATTGAAAATGTTTCTGGCACATTTCACTAGATGTGATGTAAAC
ATTACGTCAGATGTCACGTGCTCTTACACAAGCTNTCAACAATCATAAAT
GTCCAGCTGATAGAATTATGATCAAtgtattgaaaatgtttttggcacaT
TTCACTAGATGTGATGTAAACATTACGTCAGATGTCACGTGCTCTTACAC
AAGCTCAGAAAGATTGGCATGCACCGATGAGCCTCTTGTTGTTGAAAAGT
TCGTGTACAAAGAATAGACGTACAAGTTTTCTTATAGAAACATTCATAAT
CAATGAAGCTTTCAGATGttctgagttttaagcctaaaaagttcttaaat
tttcttatttttactaCCTTTAgagttttcatttctttaatcctatttta
tagaaaatttattttcaatgtatcctagtaatatcttagaaattttttct
tataacagTAGCGTGTGGTCACCTCCGTTGTTTAGctttatgtctatgag
tgtTGTCGCTCGTCTCGCTTATTATGACATATCAAATTCTAGCTTGTGTC
TAGCTTATCGTGCGATACGCTCGATCGCTTCAACACTGGAGAGAGAGCGA
TTTCTCACATAGGAGCTCCCATAAGTCTACAATTAAAGTGGCACCATCAT
ACGCCGTCCAAAATGGCCTTTGATGGTAATAACTAAAAACTTACTAATCA
CATCCAGGATCTTTAATTAGGCCGAATAACAGATTGTAATCTCAGAACAT
TCCCTAAAGATTTCAGAAACTCGCTTCATTGATTTTTCATAAGTCTCAGA
AAAGTTTTAAATAATCTGCTTGAGCCTAACACGGGGATATGTGCTCTCCA
TCTTAGATTCTTTAGATGTCGATGTGACTGAAACATGTGCAATCAAACTC
TCACAGTTCGTCCAAAGCTTAAAATAAGCTATGGTGCTCACGGTAgcaaa
tccttaaaatgttcttgacttcccagctggcacacaacgttgtttcaacg
tccgtCTAATGTTctcaacgtccatataacgttagatggacgttgaaaca
acgttgtgtgccagctgggttgtttttaatattttggccggCCAAAGAAG
CTACGCTCTTATACAgttcattttcctttgtttttttatagatttccttt
gtttagtttttttttatttattaacaTCTCTTTGATCACCATAAAACTAC
aatatataattttaattttcttttttgggaaaaaaatacaTACATATCTA
CATTGCTTTTTAAAATA
Run BLAST on NCBI

protein sequence of TCONS_00020762-protein

>TCONS_00020762-protein ID=TCONS_00020762-protein|Name=TCONS_00020762-protein|organism=Clytia hemisphaerica|type=polypeptide|length=421bp
MTSEEIKEVKNIGSWFRLKNLIGLKNNGRSFLYDLLKSQEDTVFKLYMGE
ETTYASDYVSAKYLYEEEYVFREPFIGKYFNTNMLGGRKPSMFCNGEDHA
TKKADTMKVLEYRMEKISLKDLNDVIESEMKAIDVTKGKGNNFEACLENV
AKCVADSLILGKSLHNRDDWKDWFDSSLKMFNFHPWNFGEAADRDRCLNA
MKQTPTVQNLDKILPETTQTMEGETFELMHNVHFNCTPVLSWLMISCIAR
FTDSLTEDERQSLRDEASLLFREETDSTFEERLSKSEKIDTFILEIIRLN
TPHLAGTYGRARKDFVMESKTGRYQIHKDDLLCTFVYAIHRDEEVFEDPF
KLKMTRDRKIIENQNVCFGSPLVMEPTANNHKCPAARVMINVLKMFLAHF
TRCDVNITSDVTCSYTSXQQS
Run BLAST on NCBI

transcript from alignment at sc0000370:27971..33925+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020762 ID=TCONS_00020762|Name=TCONS_00020762|organism=Clytia hemisphaerica|type=transcript|length=5955bp|location=Sequence derived from alignment at sc0000370:27971..33925+ (Clytia hemisphaerica)
tcgactcgatactttaattagggacaccctgtataagtaGAGTACTCTAT
GAGTGAAATCACTCTGTGTGTCTGATTTATATACAAAAATATATCCAAAA
AATTTAAGGTAGgtttttatttgataagattGATTAAAAATGGCAAAGTT
ATGACATAAGGTTTGTCATACATACAACACTTCAATGGATTTTCACCAGT
TTCAAGCGCCAAACAGTAGCGTACAAAGATAGACGCAAACAAAATttctg
tacagggtgtcccgaaaaaaagtatcgagtcgtaccacttctatataAAG
AAAgatcttgtgtgtgtttcaccatgaacatataaacgactggacatcta
tcttttattgtctctttgaagcgagcttcgttgccgcctgtatttcaaaa
ttggtatgaaaaatccgacaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNaattggtatgaaaaatccgacaatattctgtcataattttattt
ctttgaattatttaggtaaaaagattgatagagcttgaacattactccta
atgtacaaaTAATTTGTTTCCgatttttttcacaagtttgcaatatattt
tatcaatattttcaactctgaaatgcagaatttcaactacGTGTATACTT
TAGAAacacttttgtcactccaataatcttttttatgactttaaaaaaat
agcttgccaaagttgagagcctgtgtcataagaatatcgaaattagaatg
tgacactctttaaaattattagacacttttaagtcagaatttagaaatat
tagtcggagttttgacaagctgacgatgattttgcctctgttatctttgt
tatgatatagataaaagacttNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNgtccagtcgtttatatgttcatggtttcGCTAAAGTTTCTCTTTGTGT
CATGTTAATTGTCacgagacatcttttatgaataactttaataaaaaaca
attttcaataactttaacgtcgtAAAAATTGTAacgaaagttaattcttt
ttaatcataatgactgttgtaaaagcaattattttgttggtatatatttt
cttacattttgttaaacacacgcaacaaccttctattcagaatcatgttc
gaactcgatacttttttttcaggacaccctgtagaagagtagatttttat
gacacttatgacaattatctattcataatataaaaagatgattgcattgt
cataaaaatctacttTCCAACACAAATACTGCGCCCCTTTTGTCCACGCT
AATGTCACAGATGTAAGAAAAactgaatttatttttatttttaggtgTCG
AATATTTAATGCAGCAGGATGACATCCGAAGAAATTAAAGAAGTGAAAAA
CATCGGTTCTTGGTTCCGTCTCAAAAATCTAATTGGTCTAAAAAATAATG
GTAGATCTTTCTTATATGATTTACTAAAAAGTCAAGAAGACACAGTTTTT
AAGTTGTATATGGGTGAAGAAACAACATATGCTTCCGATTATGTGTCAGC
TAAGTATTTATACGAAGAAGAGTACGTCTTTAGAGAGCCGTTcattggaa
aatattttaacacaaATATGCTTGGAGGACGTAAACCATCTATGTTTTGC
AACGGTGAggatcacgccacgaaaaaagCTGACACAATGAAAGTGTTAGA
GTACCGTAtggaaaaaataagtttgaaagATTTGAATGATGTCATCGAAT
CGGAAATGAAAGCGATTGATGTTACCAAGGGAAAAGGAAACAATTTCGAG
GCTTGTCTTGAAAATGTAAGAATTTTAAAAGTAAAcctttttgatgatat
cacttgATAGGGTTGTAGGATGGAACTTAAGCTTATTAAGCTTGCCAGAg
acaaccccttctcacaggaTTGGCCTAAATGTTGTTCCCAGTTGAAAATT
ATACTCGAATTTTGTCCAAGCTTACACTGGAAAAAAATTGTGCTATTTCT
TTCATCGCCACCGAATTTTATGACAGAACTTTCCTGGTATTTATGTTACC
AGTCTGCTTAAAACCTGATCACGCTAAAGATTGAAAGGTGTCTATTAGCC
GTATGTTTGAGTGAGTAAGATAAGACCCCAGtttcactggaaaatttggt
aaaatcttGTCCCTGgttggagaaaaaaaacacaatttcagccccatcgg
taaatcgattttatttttatccccattgaaattaAATTGCACTCTAAAGA
TTATCATTCCCACTGGTTTTTTCGACAGGAATAAATCTAATAGGAAATAT
GATATATTTCAGGTTGCGAAATGCGTGGCAGATTCGCTTATTCTTGGTAA
AAGTCTCCACAATCGTGATGACTGGAAAGATTGGTTTGATAGCTCTTTGA
AGATGTTTAATTTCCATCCATGGAACTTTGGAGAAGCAGCAGACAGAGAC
AGATGTTTGAATGCAATGAAACAGGTATTGATTTAGCCTTTAAATCTTTA
ACCTTGCCAACTGCGCAGTGTAATATGTTCTCAAAATCTTTAAAGTCATG
AAAATAAATCATCAATAATTGTCCCTGTCAAATATAAACTTGTATATAAA
TATATTTGAGATATTTGCCAAGTATTAAGAATCTAGACATTTCCAGTTAC
CTGATTTTGCCTGTGTGACGCCGGTGTCTTTCGATGTTTCGAGAAGCTTA
CTAAAAGAAGATCCAACTAAGGaaatatgtttttttctatTGTATAAGGA
AGTTGAAGTGTATTATTTCTTAATTTTACTAAATTTTCATTGATTCCTCT
CTCATCTTTCAGACACCAACTGTTCAAAACCTTGATAAAATCCTTCCCGA
AACCACTCAAACAATGGAAGGGGAAACTTTTGAATTAATGCACAATGTTC
ATTTCAACTGTACACCTGTACTATCATGGTTAATGATCTCCTGTATTGCT
CGCTTCACCGATTCATTAACTGAGGATGAACGACAAAGTTTGAGGGACGA
AGCATCTCTTTTGTTTCGAGAAGAAACAGACTCGACTTTTGAAGAACGAC
TGAGCAAGTCGGAGAAGATTGATACTTTTATTTTGGAGATTATACGTTTG
AACACACCTCATCTAGCTGGTAAGGTCATGGCAAGGTTTTATTCTTCGTG
CAAAAACTTCTGACTGTAAATGAACTGTTTTTAAAACACTGAAATAACTT
TGTAAGAAATGATATTTTGcctgcttttttataagaagcagTAAATTTCA
GCTGAGGCGcgacttttctttttcgaattttctttatttttctttatttg
agATTTTCACgattaaaaatgtttaattatcaagagggtttgtaaaacat
tggtgaatgacaatttaaaaaaatgaaaaatattgtattcaataataaag
ttataagaaatttcttttgtagGATTATAAATagcactttttcatttgaa
atactgCGCTACATcacggggtgcctcactttctaactgatattttcaga
tagcgagtcggtatgtctgattatggaaacaatttaaagtcaattgaaac
aataattgtcaaaatatttactcCGATATTTTTAAAGAGGAATCATGAAa
gttctcaaattcataacatacgctgataaaattagatttacttcactttt
cttataaaaacaaaacactcAAGGgtacagagatggatttctattgtgaa
cagtttacaatagaaaagacaaagaatatatccgctaaggaattctcctC
CTTCGCTATTACATATCCCTGAAATCAGCAACTACCCAACCGTTTCTACA
ACATTCAGAAGCtgaaattattttataattttgccaaattaagcctcata
ttctttttaaaaaatcatttaacatGACGATACTACGACTTCTCTTGATT
ACACTAATTGACCGAATCTATCGTAttttttttcaggtacttaTGGAAGA
GCCAGGAAAGATTTTGTAATGGAATCCAAAACAGGGCGATATCAAATCCA
TAAAGATGATTTACTGTGTACTTTCGTCTACGCCATTCATCGAGATGAAG
AAGTTTTTGAGGAtcctttcaaattgaaaatgacCCGTGATAGGAAGATT
ATCGAGAATCAAAATGTGTGTTTTGGGTCTCCTCTTGTCATGGAACCTAC
AGCCAACAATCATAAATGTCCAGCTGCTAGAGTTATGATCAATGTATTGA
AAATGTTTCTGGCACATTTCACTAGATGTGATGTAAACATTACGTCAGAT
GTCACGTGCTCTTACACAAGCTNTCAACAATCATAAATGTCCAGCTGATA
GAATTATGATCAAtgtattgaaaatgtttttggcacaTTTCACTAGATGT
GATGTAAACATTACGTCAGATGTCACGTGCTCTTACACAAGCTCAGAAAG
ATTGGCATGCACCGATGAGCCTCTTGTTGTTGAAAAGTTCGTGTACAAAG
AATAGACGTACAAGTTTTCTTATAGAAACATTCATAATCAATGAAGCTTT
CAGATGttctgagttttaagcctaaaaagttcttaaattttcttattttt
actaCCTTTAgagttttcatttctttaatcctattttatagaaaatttat
tttcaatgtatcctagtaatatcttagaaattttttcttataacagTAGC
GTGTGGTCACCTCCGTTGTTTAGctttatgtctatgagtgtTGTCGCTCG
TCTCGCTTATTATGACATATCAAATTCTAGCTTGTGTCTAGCTTATCGTG
CGATACGCTCGATCGCTTCAACACTGGAGAGAGAGCGATTTCTCACATAG
GAGCTCCCATAAGTCTACAATTAAAGTGGCACCATCATACGCCGTCCAAA
ATGGCCTTTGATGGTAATAACTAAAAACTTACTAATCACATCCAGGATCT
TTAATTAGGCCGAATAACAGATTGTAATCTCAGAACATTCCCTAAAGATT
TCAGAAACTCGCTTCATTGATTTTTCATAAGTCTCAGAAAAGTTTTAAAT
AATCTGCTTGAGCCTAACACGGGGATATGTGCTCTCCATCTTAGATTCTT
TAGATGTCGATGTGACTGAAACATGTGCAATCAAACTCTCACAGTTCGTC
CAAAGCTTAAAATAAGCTATGGTGCTCACGGTAgcaaatccttaaaatgt
tcttgacttcccagctggcacacaacgttgtttcaacgtccgtCTAATGT
Tctcaacgtccatataacgttagatggacgttgaaacaacgttgtgtgcc
agctgggttgtttttaatattttggccggCCAAAGAAGCTACGCTCTTAT
ACAgttcattttcctttgtttttttatagatttcctttgtttagtttttt
tttatttattaacaTCTCTTTGATCACCATAAAACTACaatatataattt
taattttcttttttgggaaaaaaatacaTACATATCTACATTGCTTTTTA
AAATA

Coding sequence (CDS) from alignment at sc0000370:27971..33925+

>TCONS_00020762 ID=TCONS_00020762|Name=TCONS_00020762|organism=Clytia hemisphaerica|type=CDS|length=5064bp|location=Sequence derived from alignment at sc0000370:27971..33925+ (Clytia hemisphaerica)
ATGACATCCGAAGAAATTAAAGAAGTGAAAAACATCGGTTCTTGGTTCCG
TCTCAAAAATCTAATTGGTCTAAAAAATAATGGTAGATCTTTCTTATATG
ATTTACTAAAAAGTCAAGAAGACACAGTTTTTAAGTTGTATATGGGTGAA
GAAACAACATATGCTTCCGATTATGTGTCAGCTAAGTATTTATACGAAGA
AGAGTACGTCTTTAGAGAGCCGTTcattggaaaatattttaacacaaATA
TGCTTGGAGGACGTAAACCATCTATGTTTTGCAACGGTGAggatcacgcc
acgaaaaaagCTGACACAATGAAAGTGTTAGAGTACCGTAtggaaaaaat
aagtttgaaagATTTGAATGATGTCATCGAATCGGAAATGAAAGCGATTG
ATGTTACCAAGGGAAAAGGAAACAATTTCGAGGCTTGTCTTGAAAATGTT
GCGAAATGCGTGGCAGATTCGCTTATTCTTGGTAAAAGTCTCCACAATCG
TGATGACTGGAAAGATTGGTTTGATAGCTCTTTGAAGATGTTTAATTTCC
ATCCATGGAACTTTGGAGAAGCAGCAGACAGAGACAGATGTTTGAATGCA
ATGAAACAGACACCAACTGTTCAAAACCTTGATAAAATCCTTCCCGAAAC
CACTCAAACAATGGAAGGGGAAACTTTTGAATTAATGCACAATGTTCATT
TCAACTGTACACCTGTACTATCATGGTTAATGATCTCCTGTATTGCTCGC
TTCACCGATTCATTAACTGAGGATGAACGACAAAGTTTGAGGGACGAAGC
ATCTCTTTTGTTTCGAGAAGAAACAGACTCGACTTTTGAAGAACGACTGA
GCAAGTCGGAGAAGATTGATACTTTTATTTTGGAGATTATACGTTTGAAC
ACACCTCATCTAGCTGgtacttaTGGAAGAGCCAGGAAAGATTTTGTAAT
GGAATCCAAAACAGGGCGATATCAAATCCATAAAGATGATTTACTGTGTA
CTTTCGTCTACGCCATTCATCGAGATGAAGAAGTTTTTGAGGAtcctttc
aaattgaaaatgacCCGTGATAGGAAGATTATCGAGAATCAAAATGTGTG
TTTTGGGTCTCCTCTTGTCATGGAACCTACAGCCAACAATCATAAATGTC
CAGCTGCTAGAGTTATGATCAATGTATTGAAAATGTTTCTGGCACATTTC
ACTAGATGTGATGTAAACATTACGTCAGATGTCACGTGCTCTTACACAAG
CTNTCAACAATCATAAATGACATCCGAAGAAATTAAAGAAGTGAAAAACA
TCGGTTCTTGGTTCCGTCTCAAAAATCTAATTGGTCTAAAAAATAATGGT
AGATCTTTCTTATATGATTTACTAAAAAGTCAAGAAGACACAGTTTTTAA
GTTGTATATGGGTGAAGAAACAACATATGCTTCCGATTATGTGTCAGCTA
AGTATTTATACGAAGAAGAGTACGTCTTTAGAGAGCCGTTcattggaaaa
tattttaacacaaATATGCTTGGAGGACGTAAACCATCTATGTTTTGCAA
CGGTGAggatcacgccacgaaaaaagCTGACACAATGAAAGTGTTAGAGT
ACCGTAtggaaaaaataagtttgaaagATTTGAATGATGTCATCGAATCG
GAAATGAAAGCGATTGATGTTACCAAGGGAAAAGGAAACAATTTCGAGGC
TTGTCTTGAAAATGTTGCGAAATGCGTGGCAGATTCGCTTATTCTTGGTA
AAAGTCTCCACAATCGTGATGACTGGAAAGATTGGTTTGATAGCTCTTTG
AAGATGTTTAATTTCCATCCATGGAACTTTGGAGAAGCAGCAGACAGAGA
CAGATGTTTGAATGCAATGAAACAGACACCAACTGTTCAAAACCTTGATA
AAATCCTTCCCGAAACCACTCAAACAATGGAAGGGGAAACTTTTGAATTA
ATGCACAATGTTCATTTCAACTGTACACCTGTACTATCATGGTTAATGAT
CTCCTGTATTGCTCGCTTCACCGATTCATTAACTGAGGATGAACGACAAA
GTTTGAGGGACGAAGCATCTCTTTTGTTTCGAGAAGAAACAGACTCGACT
TTTGAAGAACGACTGAGCAAGTCGGAGAAGATTGATACTTTTATTTTGGA
GATTATACGTTTGAACACACCTCATCTAGCTGgtacttaTGGAAGAGCCA
GGAAAGATTTTGTAATGGAATCCAAAACAGGGCGATATCAAATCCATAAA
GATGATTTACTGTGTACTTTCGTCTACGCCATTCATCGAGATGAAGAAGT
TTTTGAGGAtcctttcaaattgaaaatgacCCGTGATAGGAAGATTATCG
AGAATCAAAATGTGTGTTTTGGGTCTCCTCTTGTCATGGAACCTACAGCC
AACAATCATAAATGTCCAGCTGCTAGAGTTATGATCAATGTATTGAAAAT
GTTTCTGGCACATTTCACTAGATGTGATGTAAACATTACGTCAGATGTCA
CGTGCTCTTACACAAGCTNTCAACAATCATAAATGACATCCGAAGAAATT
AAAGAAGTGAAAAACATCGGTTCTTGGTTCCGTCTCAAAAATCTAATTGG
TCTAAAAAATAATGGTAGATCTTTCTTATATGATTTACTAAAAAGTCAAG
AAGACACAGTTTTTAAGTTGTATATGGGTGAAGAAACAACATATGCTTCC
GATTATGTGTCAGCTAAGTATTTATACGAAGAAGAGTACGTCTTTAGAGA
GCCGTTcattggaaaatattttaacacaaATATGCTTGGAGGACGTAAAC
CATCTATGTTTTGCAACGGTGAggatcacgccacgaaaaaagCTGACACA
ATGAAAGTGTTAGAGTACCGTAtggaaaaaataagtttgaaagATTTGAA
TGATGTCATCGAATCGGAAATGAAAGCGATTGATGTTACCAAGGGAAAAG
GAAACAATTTCGAGGCTTGTCTTGAAAATGTTGCGAAATGCGTGGCAGAT
TCGCTTATTCTTGGTAAAAGTCTCCACAATCGTGATGACTGGAAAGATTG
GTTTGATAGCTCTTTGAAGATGTTTAATTTCCATCCATGGAACTTTGGAG
AAGCAGCAGACAGAGACAGATGTTTGAATGCAATGAAACAGACACCAACT
GTTCAAAACCTTGATAAAATCCTTCCCGAAACCACTCAAACAATGGAAGG
GGAAACTTTTGAATTAATGCACAATGTTCATTTCAACTGTACACCTGTAC
TATCATGGTTAATGATCTCCTGTATTGCTCGCTTCACCGATTCATTAACT
GAGGATGAACGACAAAGTTTGAGGGACGAAGCATCTCTTTTGTTTCGAGA
AGAAACAGACTCGACTTTTGAAGAACGACTGAGCAAGTCGGAGAAGATTG
ATACTTTTATTTTGGAGATTATACGTTTGAACACACCTCATCTAGCTGgt
acttaTGGAAGAGCCAGGAAAGATTTTGTAATGGAATCCAAAACAGGGCG
ATATCAAATCCATAAAGATGATTTACTGTGTACTTTCGTCTACGCCATTC
ATCGAGATGAAGAAGTTTTTGAGGAtcctttcaaattgaaaatgacCCGT
GATAGGAAGATTATCGAGAATCAAAATGTGTGTTTTGGGTCTCCTCTTGT
CATGGAACCTACAGCCAACAATCATAAATGTCCAGCTGCTAGAGTTATGA
TCAATGTATTGAAAATGTTTCTGGCACATTTCACTAGATGTGATGTAAAC
ATTACGTCAGATGTCACGTGCTCTTACACAAGCTNTCAACAATCATAAAT
GACATCCGAAGAAATTAAAGAAGTGAAAAACATCGGTTCTTGGTTCCGTC
TCAAAAATCTAATTGGTCTAAAAAATAATGGTAGATCTTTCTTATATGAT
TTACTAAAAAGTCAAGAAGACACAGTTTTTAAGTTGTATATGGGTGAAGA
AACAACATATGCTTCCGATTATGTGTCAGCTAAGTATTTATACGAAGAAG
AGTACGTCTTTAGAGAGCCGTTcattggaaaatattttaacacaaATATG
CTTGGAGGACGTAAACCATCTATGTTTTGCAACGGTGAggatcacgccac
gaaaaaagCTGACACAATGAAAGTGTTAGAGTACCGTAtggaaaaaataa
gtttgaaagATTTGAATGATGTCATCGAATCGGAAATGAAAGCGATTGAT
GTTACCAAGGGAAAAGGAAACAATTTCGAGGCTTGTCTTGAAAATGTTGC
GAAATGCGTGGCAGATTCGCTTATTCTTGGTAAAAGTCTCCACAATCGTG
ATGACTGGAAAGATTGGTTTGATAGCTCTTTGAAGATGTTTAATTTCCAT
CCATGGAACTTTGGAGAAGCAGCAGACAGAGACAGATGTTTGAATGCAAT
GAAACAGACACCAACTGTTCAAAACCTTGATAAAATCCTTCCCGAAACCA
CTCAAACAATGGAAGGGGAAACTTTTGAATTAATGCACAATGTTCATTTC
AACTGTACACCTGTACTATCATGGTTAATGATCTCCTGTATTGCTCGCTT
CACCGATTCATTAACTGAGGATGAACGACAAAGTTTGAGGGACGAAGCAT
CTCTTTTGTTTCGAGAAGAAACAGACTCGACTTTTGAAGAACGACTGAGC
AAGTCGGAGAAGATTGATACTTTTATTTTGGAGATTATACGTTTGAACAC
ACCTCATCTAGCTGgtacttaTGGAAGAGCCAGGAAAGATTTTGTAATGG
AATCCAAAACAGGGCGATATCAAATCCATAAAGATGATTTACTGTGTACT
TTCGTCTACGCCATTCATCGAGATGAAGAAGTTTTTGAGGAtcctttcaa
attgaaaatgacCCGTGATAGGAAGATTATCGAGAATCAAAATGTGTGTT
TTGGGTCTCCTCTTGTCATGGAACCTACAGCCAACAATCATAAATGTCCA
GCTGCTAGAGTTATGATCAATGTATTGAAAATGTTTCTGGCACATTTCAC
TAGATGTGATGTAAACATTACGTCAGATGTCACGTGCTCTTACACAAGCT
NTCAACAATCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011654XLOC_011654Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020762-exon-sc0000370-1491911889:27971..28078TCONS_00020762-exon-sc0000370-1491911889:27971..28078Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1510915933:27971..28078TCONS_00020762-exon-sc0000370-1510915933:27971..28078Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1575043694:27971..28078TCONS_00020762-exon-sc0000370-1575043694:27971..28078Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1491911889:29815..30285TCONS_00020762-exon-sc0000370-1491911889:29815..30285Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1510915933:29815..30285TCONS_00020762-exon-sc0000370-1510915933:29815..30285Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1575043694:29815..30285TCONS_00020762-exon-sc0000370-1575043694:29815..30285Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1491911889:30783..30944TCONS_00020762-exon-sc0000370-1491911889:30783..30944Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1510915933:30783..30944TCONS_00020762-exon-sc0000370-1510915933:30783..30944Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1575043694:30783..30944TCONS_00020762-exon-sc0000370-1575043694:30783..30944Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1491911889:31283..31589TCONS_00020762-exon-sc0000370-1491911889:31283..31589Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1510915933:31283..31589TCONS_00020762-exon-sc0000370-1510915933:31283..31589Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1575043694:31283..31589TCONS_00020762-exon-sc0000370-1575043694:31283..31589Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1491911889:32407..33925TCONS_00020762-exon-sc0000370-1491911889:32407..33925Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1510915933:32407..33925TCONS_00020762-exon-sc0000370-1510915933:32407..33925Clytia hemisphaericaexon
TCONS_00020762-exon-sc0000370-1575043694:32407..33925TCONS_00020762-exon-sc0000370-1575043694:32407..33925Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020762-proteinTCONS_00020762-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000370supercontigsc0000370:27971..33925 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
78.777	86.8483	71.4802	69.5045	58.2717	30.5013	60.5855	55.4069	115.761	113.746	76.3305	67.7108	11.1089	15.0631	40.3981	58.6572	45.3878	47.9955	2.06716	25.2391	3.3609	2.13421	38.1373	34.5364	0.875053	1.0324	3.22485	3.22099	17.2003	26.3095
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001128Cyt_P450
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0020037heme binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020762 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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