TCONS_00020833 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020833
Unique NameTCONS_00020833
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3584

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020833 ID=TCONS_00020833|Name=TCONS_00020833|organism=Clytia hemisphaerica|type=transcript|length=3584bp
AACCGGGTTGCGGAAAGTCCGGATTGTTGGCCAAAGTTGCAGTTTTATGT
TTGAAggaatttcaagaaaacaatAACTTTTTGTTTATCCATGCAGTTGA
TACTTGTCCTGGTTCCAATGTTTTGGAAGGCATGATGCGAAGGCTTCAAA
TTAATCTGAGAAAATACAGACGAGATATGGGTGAAACGAAACTATCCAAA
GAATTTACTGGAAATGCTTCAGAGCTGAAACAACAACATCACGAATTTCT
CATCGAAAGTGCATATCAatatccaaaaaaattatttgtgaTCATTATTG
ATGCTGTCAATCAATTCCACAGTGGGCTTGGTGCTTGGGATATGTGGTGG
CTTCCGCCAACAAAAAAAGCtcccaaaaatctcaaattcaTGATCTCAAC
ATTAAACCAAGAAAATGGGACATTTCAGAACGCTTGTCATGTTTCACCAG
ATGCACAACGACTTCCCATCGAAAACATGAGCCATGAAGATTTGCAAGAA
ATGGTCCGAGCAACACTTGAAAGGTTTAATAAGAAGCTTACCGAAAATGA
GGATCCGATTCTGGGAAATCAAATGGAGAAATTGTTGTCCAAAAGTCAAA
GTCCATTGTACTTAATCGCTGCATGTGAGGCGTTGAGAAagtttggaatt
ttcgaaaaagtgaCCCAGTATATTGAGAGTCTACCAAACACCATTACAGA
CCTGTTTAGCTTCCTTTTAGACGAATGGTCTGAAAAGTATGGTAAACTAT
TTGTTGAGGACGTAGCAGGATTATTGTGTGCTTCAAAAGATGGCTTACTG
GAAAACCAAATCAACGACCTTCTGCATTTTAAAGAACAAAGAGAAAAAGG
CGATGGGGAGTTTCTGTACGATGCAAATTTTCCAAGAATCTACGATTCGA
TTGCTCATTTTTTAGCTGCTGGTGGTGGTGGCTATCTTCGATTCTTCCAC
GTCCAGCTCAAATATACCGTGCGCCGAAAATTTATGACGGAATTATTCGA
ACAAGAAACACACGTGTGgatgagagactttttcgaagaTATTGTCTCTA
AGCAATGCCGTGAAACACCTCAAGAGGAACCACCAGCATATTTCGAGCAC
GCCCTAGAACAACTGGTCTACCATCAACTCAAAGCTCATCAAAATCAAGA
TTTGCctttggaaagcttgaaaatgAGTTTAAGGAATATCTACTTTGTTA
AAGAACGCATTGTTGCCAAGCAGCATCAAAGCCTTAGTGACGAATACGCA
CTTGCCTTGGAAACACTCACAAATACTGACGATATAGATGCTCTCAAGCA
ATGGGCCTCGTTTGTTCAGCTCTACACATCCTATATTCGGGAATTCCCGA
ATTTCTGTCTTAACATGGCTGTAACACAAGCCCCAACCTCATACGTCACC
AAAGATACCTTGGCTCTAGGGATGGAGCCCTCAGTTAAGGGGGAAGCGTA
CCCTTTATATTGGTCCAACATACCTGAGGAATGTGACCGGATGCTTGCTA
AATACGCTCTAGGGGGTATTGACTGTGCTGTTACGAGCTCAAAAGGTGGT
TTAGTAGCCATTATGGCGTGGGAAAGAGTTTGTGTATTTGACCAAAAAAG
TGGAGAGTTAGTCCACCAGGTAAATGGACGAGCGTCAGTTGTTCTTCTTA
CAGCTGACAGCAAGACTTTACTTATTGGTGATGACAGAGGAACGGTATCA
AAATATGATGTTTCTACAGGTAGACTGGAAAGTGCTTGTGAAATCTTGGA
AGAAGTTTGTTACATTTCATGGCTTGATTGTAATGGAAATGATCTGTTTA
CCGGTACTGGGTGGTTTGACAAAACAGCATTTTTGAAGTATGACATAAAA
CCTTCATGGATTGTAATTCTTGATATGAATTCATTTGAAATTACCAGGAA
ATTTTGTATGGAGAGGCCAGCTTTCGATTACTGCTTTCACAAACGATTGC
AGATTATATTCTCAGCACATGTAGGGGGCAACATAATTGGATGGGACCTT
CAAGGAAATCAACTATGCTCAGCTAAGGGCGGTGGTGAATTTATTTATTG
CCTTTCACCTCATCCCACTGAAGACATGATCATCTCAGGCTCTAAAGACT
TTaTTATCAGAGAGTGGGCTCTAACAAATTCATCAATTCGCATTTGTAAT
CAACACATCGAAGATGTAGGACGAAAAAATATGACGAACAATTATACTGG
TCGTAGTGGAATCTGTTCTTTATGCTATGACCATAATGGTGAACGAATCC
TTTCCATAGAATATGAAAACAACTTATTGAGAATCTATAGTAAAACCGGC
AAATTACTGGAGGAGTTACGAGGACACTCTGACCCCATCAGCAAGATTTG
TCTCGTTCCTGGAGGAAATAAAattttaacaTGTGGCTTATACCATGAAA
GTATCCTTTGGGAATTACCAAATACGGACGAAGTACAGAATAACTCAGCA
CCAATGCAAAGAAACTTAGACGGAAGAGTGAAGTGGTGTTCTTTCATAAG
AGAAGGGAATTACTTTTTAACCCTTGCTGAGGGTTGGTTAAGACTATACG
AACTTCATGAAACATCCAATATCGAATTGAAATTATCCAAAGAAATATTC
AAGAGTAGTAAACAACGATGTATCATTCATCCAGATAGGAAACACATATT
TGTTTTCAGTAGTAATTCAAACATAGCTTGTCTTAACATCGATGGCTTCG
AATCTGTCTCTGAATATAATGTTGTCCCTAGTGAAGATGGGACAAAGTTA
ACTGACATGGACATCAATAGTAATGGCACACATCTATTGGTTACTGCGAA
TATACAGAGAGGCTCAGGTGTGGGCAAGGTATTAGATATTTCGGACGTTG
CGTCATTCAAGGAAAAATTGTCACTCGAAGGTTATAGTGGGCGGATTTCA
GGCTGCGCAATAAACAATAATGGTGATCTAGCTTGTCTTTTTGGCAAATA
TGGGGGTTTTATGGTTTTTGATTTGACCAATGGTGAGGTGAAATACAATG
TTCAGCGTAGGACATCTTTCGTCAGATTCTTTTCATCGAATTGTATTTTA
TATGGCGAAGAAACAATTTTCTACAAATACGATCCAGAATCTGAAAAAGA
TGTCTGTGAATATAAAGGACACACTGTGGAGTACTGCACTGACGCTGTTA
TTTTGAATGAGGATGAACAAATTATGACTGTTTCACAAGAAGGAACTTTA
AGAATTTTCGATGCCAACACTGGAGAAAATATTTATGGATTTTACAATCA
TCGATCTCAAGGTTTTACGTGTGTAGCCGCTCATCCATCTGAGAAAATCT
TCTTAGCGgctagtgaaagttcgtcggtgtACGTCCTTAAAACGACTCCT
AATGATCAACTTAATAATGGTCATAAGCAGTAAAGCATCGGTTGGTTCAA
AGAAGACAGACACACTTGCATACTTATGGATGTAGTTGTTCAAGCACTTT
TTTCTTCGCTTGACATTTTACGGGTCAATTCATTCATTTATAGATCTGAG
TATTACTATTAATAATTCATCCATAcactcattcattcattcatccaatc
attcattcattcacgcATTTATTTATCATTTCAC
Run BLAST on NCBI

transcript from alignment at sc0000371:56194..69931+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020833 ID=TCONS_00020833|Name=TCONS_00020833|organism=Clytia hemisphaerica|type=transcript|length=13738bp|location=Sequence derived from alignment at sc0000371:56194..69931+ (Clytia hemisphaerica)
AACCGGGTTGCGGAAAGTCCGGATTGTTGGCCAAAGTTGCAGTTTTATGT
TTGAAggaatttcaagaaaacaatAACTTTTTGTTTATCCATGCAGTTGA
TACTTGTCCTGGTTCCAATGTTTTGGAAGGTGAGATTATAGTCAGTCAAC
AACCACCGTACCGAGGGCACATGAAGAATCTGCAATGTATTTGTCCAAAA
CTCTTAGTTTAGAATGCCTTCAGCTGtcaaaatgagcaaagatgGGAAAT
TGCACTTTAAGGGTGTAAGATTTGGAatatctgaccatattttgccttaa
aatagtaaaaaactttcaagaaaatgcaccgtaagggtctATTTTTCGCG
CAAACTCAACTTTGGCTAAATTTACTCTGCATTGTAAGGGTCTAAATTTA
AAGGCTTAATGTTGAGTCGAACGTACGGACGTTTTTGAATGCAGTATGCA
TAACTATAATGTTACCTCTATAATCATTTTTGCTAACGCTTGTAAAAGAT
TTTCACCTTTTCTTGGACTTGGAATCTTAAAGTTTATTAATATTGAATTT
CGTCATTGTTTACTCTTTATATCAACGCAGGCATGATGCGAAGGCTTCAA
ATTAATCTGAGAAAATACAGACGAGATATGGGTGAAACGAAACTATCCAA
AGAATTTACTGGAAATGCTTCAGAGCTGAAACAACAACATCACGAATTTC
TCATCGAAAGTGCATATCAatatccaaaaaaattatttgtgaTCATTATT
GATGCTGTCAATCAATTCCACAGTGGGCTTGGTAGGTTTCCATTACTGTT
CAGTTTGGTTCGAAAAGAAATGAAGTTTTTCATGGTCaggatatgcacca
ctgcatagtgcggaaaggggtctgaccccccccccccNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCCCCCcccttttcatgaaaatttcttatccct
cttcttcatttttcggaAGTTGTCATCCCCCTTTAAGAAAGCAGGGGGTC
CGAACTATGCACTGTAATGACTTCAAAGATAATTACAAAATTACGTAGGA
TCAACCAGCTCTGGTTATAACAACATAACACCATAATAGCATATTTATCA
GAAGACATTGCGGTAGTCCATATTCTGAACTTTGTTGGTCATTCATTAGT
GAGCTTGTTTATATGTCTTTCCTTTGGACGGATACATTTATAGCTTCTTA
GTTGTCTAGATCCTAAATGACTGAGGACatacttttaccgtcctcaaatt
TGCGGGTCAatactgcgggttattccaaatcgcttcagtcactccgtTCA
GTGTTCTCAAAAGTGAGAATACAAAACCTCGCAATTTTGGAGACAGTAAT
ATTAGTCTAGATGCTGACTGCTTTAAAAGTATCACAATTTCCTTTAAGCG
TTATCTATTTACTTTTTTAGGTGCTTGGGATATGTGGTGGCTTCCGCCAA
CAAAAAAAGCtcccaaaaatctcaaattcaTGATCTCAACATTAAACCAA
GAAAATGGGACATTTCAGAACGCTTGTCATGTTTCACCAGATGCACAACG
ACTTCCCATCGAAAACATGAGCCATGAAGATTTGCAAGAAATGGTCCGAG
CAACACTTGAAAGGTTTAATAAGAAGCTTACCGAAAATGAGGATCCGATT
CTGGGAAATCAAATGGAGAAATTGTTGTCCAAAAGTCAAAGTCCATTGTA
CTTAATCGCTGCATGTGAGGCGTTGAGAAagtttggaattttcgaaaaag
tgaCCCAGTATATTGAGAGTCTACCAAACACCATTACAGACCTGTTTAGC
TTCCTTTTAGACGAATGGTCTGAAAAGTATGGTAAACTATTTGTTGAGGA
CGTAGCAGGATTATTGTGTGCTTCAAAAGATGGCTTACTGGAAAACCAAA
TCAACGACCTTCTGCATTTTAAAGAACAAAGAGAAAAAGGCGATGGGGAG
TTTCTGTACGATGCAAATTTTCCAAGAATCTACGATTCGATTGCTCATTT
TTTAGCTGCTGGTGAGGTTTTCTAGATATTTTCCCgtaattattttttaa
caaCATAATGGTAACAGCATTAAGAGTTGCGCAATCTAAGATAAacattg
ttgaaatatagcactTTCATACTCCCTAGCTAATACCTAATACCTAGTGA
GTTAGAGTTCTTCACTTTAGAAAACCTCGTACATGAACTGATCTAGTTGA
CACACAAATAGATGACTCTAATTAATGGCATACTGTTTTTAGGTGGTGGT
GGCTATCTTCGATTCTTCCACGTCCAGCTCAAATATACCGTGCGCCGAAA
ATTTATGACGGAATTATTCGAACAAGAAACACACGTGTGgatgagagact
ttttcgaagaTATTGTCTCTAAGCAATGCCGTGAAACACCTCAAGAGGAA
CCACCAGCATATTTCGAGCACGCCCTAGAACAACTGGTCTACCATCAACT
CAAAGCTCATCAAAATCAAGATTTGCctttggaaagcttgaaaatgAGTT
TAAGGAATATCTACTTTGTTAAAGAACGCATTGTTGCCAAGCAGCATCAA
AGCCTTAGTGACGAATACGCACTTGCCTTGGAAACACTCACAAATACTGA
CGATATAGATGCTCTCAAGCAATGGGCCTCGTTTGTTCAGCTCTACACAT
CCTATATTCGGGAATTCCCGAATTTCTGTCTTAACATGGCTGTAACACAA
GCCCCAACCTCATACGTCACCAAAGATACCTTGGCTCTAGGGATGGAGCC
CTCAGTTAAGGGGGAAGCGTACCCTTTATATTGGTCCAACATACCTGAGG
AATGTGACCGGATGCTTGCTAAATACGCTCTAGGGGGTATTGACTGTGCT
GTTACGAGCTCAAAAGGTGGTTTAGTAGCCATTATGGCGTGGGAAAGAGT
TTGTGTATTTGACCAAAAAAGTGGAGAGTTAGTCCACCAGGTAAATGGAC
GAGCGTCAGTTGTTCTTCTTACAGCTGACAGCAAGACTTTACTTATTGGT
GATGACAGAGGAACGGTATCAAAATATGATGTTTCTACAGGTAGACTGGA
AAGTGCTTGTGAAATCTTGGAAGAAGTAAgtgttttctttgtttagtttg
tttttttggacctacctggaggtcctataaattaacctttgtccgtccgt
ccgttcgttagttaccagcttttctcgagattggctcattagttttttct
gattttttgcacaatgatgcaaaatggcaatgcccaaaatgtgacggagc
ccgattttcggaaaaatctttggccaaatttgagccaaaaaacggctGAA
AAACGGTTTGTGAAAAATCGGATCATTgatgttttctgattttttgtatg
aaagtaggtaaaagatggctcaagcagatttttgtaaaaaacgaattttt
cagctcaaataaagcacgtttatctataagaatcactattaataagcata
catcaatgttcttagtcaaattactcaattttttttatgagatattgCTT
GCTTGaatgaaagaatatttaaagagcatgaaatttaggtttctaaacgg
ttttttttataagaaacagacgactaattttaaaagatcgtcactatttg
tgtttgaatgattgtttaatggtcacgctcacttagatatcaattatata
cccggggggggggtactacccttgtcgaccgacgggggtgctccgctgac
gttcgaaaaatggaccctacgtgggactcgaaatttgcgaaaaaAGTGAC
CCTGAATGGGACTGAAATTCCAAAATTTTCTCAAATTGTCTACTTTTTCC
CCAAATTTTTCAAAAATAGGCACCCTACGAGGGACTGATATTTCTATTTT
GGTGTTTTTGCGACCCTACCTGGGACTCATGGGAGGTAAAAAAGGTACCC
TGACCAGCGGAGCATCCCCGTAACCCATCTTGCCCTAGTCCccccccccc
ccgggattatatacgtgttaaatgcataaccgcaggtaggtccataaaag
tatcacttgttatgtGAAATATCAtactgaaaaatattaaaaacatctTT
TAGATTTTAACTACTTTAAATGAAAAGATTTCTTATAAtccttaaaaatg
ttttcagCTGAAATGCTTAACTTGTTTAAATTTATCAATGGATTGCAGCT
TTTACTGTTTGATTAACCCAAAAGTGGTTTGCTTTGGTATTTCCTGTGTA
TGTCATGGCagttatatttttataatattttgatacTTTAAGGTTTGTTA
CATTTCATGGCTTGATTGTAATGGAAATGATCTGTTTACCGGTACTGGGT
GGTTTGACAAAACAGCATTTTTGAAGTATGACATAAAACCTTCATGGATT
GTAATTCTTGATATGAATTCATTTGAAATTACCAGGAAATTTTGTATGGA
GAGGCCAGCTTTCGATTACTGCTTTCACAAACGATTGCAGATTATATTCT
CAGCACATGTAGGGGGCAACATAATTGGATGGGACCTTCAAGGTAATTCA
AGATAAATGTTGGTTGTTTGAATTTTCATAAGCCTcagcggggggggggc
actcgatttacGAACAACCATATATCCGGTCCAATATAATTCGGACTTTA
AAAGCGGCCCTTTGCAGTGAAGAGAAAACTATTCTAAGTTTGATCAAAAT
ATCGACCCTTTTTGCCCAATTAGAGGCAAAAAATTGGTCAGGTaaatttt
gccctaaaaatcacttttttacaCCCTTTCAGTGTACTTTTTGAAGCTCG
AAAAACATACCCTTTAAAGGGCCGTTTACCTTGAGTACCATCCTCTTGGG
CTTTACGCTATGTGTGCCTTATTCCCTGGTGTTTCTTTTCTATGTTATGA
GCTATTGCTTGGTTTAAGATAGTTTACACCCTTTTGTGTACTGCGGAAat
gataaagaagaaaatatggttaaaaattGAGTAAATTTGTAGGCGTACTT
ATGACAATTCATTTTCTTAGGAAATCAACTATGCTCAGCTAAGGGCGGTG
GTGAATTTATTTATTGCCTTTCACCTCATCCCACTGAAGACATGATCATC
TCAGGCTCTAAAGACTTTGTAAGTCGTTTAACATTATTGTCAGTCCATTA
TTGACTTTCTACAGTGTCCGGAAAAAAGAGGACCAGAATTTACATANTAT
TGTCAGTCCATTAATGACTTTCTACAGTGTCCGGAAAAAAGAGGACCAGA
ATTTACATAATATAGAATTCAAGACCTACTCTTAACTGGATTTTAATAAG
ATGgaacttttttgcttttttgcttCAGTAAATATTCGATTCCCAAATAA
TAGGGGGTGAACCCTTAggacccgtgacatcttttatgcgacgcaaccaa
acctggtctatttcaaagaatgaagtatttaaagagTTTTTCGCGAGGGG
GTTTTTtgctggaaatttttttatgacacaaaaactgacgtcacagGCAA
AACCCCTTTTATTTACCCCTAAAATTTGAAGAACAATTTCATGACGTCAG
TTTTTGAATCATAAAACCTTTCTTAGGCCTAAAGCAAATGGCTATAAAAT
GAgatattaaaaaagaaattgagtaagtatgtcataaatatgttgaacgt
tgaaaaagaatgcggctattatattttgatttttcccgacataTTTCGGA
CTCAatccgttctcaagggaatgGAACAAGGGAAGGGAACATTTAAAATG
TGatgattttatgattctgttctGCATTTTTTCGAATACACTCTATGTTA
GATGTTGCCGGTTAGACCCAATCGGTAGAGTATTTGCTTTGTTATCCAAA
GGTTGGGGTTTCTATTTTTGCTTGCCACAATCTTGACGAATGAGTTATTA
GGCtatctttaaaagttttgtgacTTGAAATTCTTTCCGAGTTCGAACCT
TACTTGTCGTTTTATAGGCTTCAgtgtaaaatgaaaattttttttctctc
tagaTTATCAGAGAGTGGGCTCTAACAAATTCATCAATTCGCATTTGTAA
TCAACACATCGAAGATGTAGGACGAAAAAATATGACGAACAATTATACTG
GTCGTAGTGGAATCTGTTCTTTATGCTATGACCATAATGGTGAACGAATC
CTTTCCATAGAATATGAAAACAACTTATTGAGAATCTATAGTAAAAGTGA
GTTTTCATTTTATATGGTAGACCTTACACATAACTTGATCTATAGTAGAA
ACTCTGGACCGTTTGATATCgtttattcttaaaaaaacaaaccatacAAG
AGCACAAGTCTTCGATGaaggatatttttaaattttacagacTGTAAAAG
ACCCAATTTCTTAGTATATTGTACAAAGATTCTCACAAAGTGTCGAAAAT
GAGATCACTGTAAGGACGtctttaggcttgaaactcgaaATGTAAAGAAC
ATCTGAAGCCGTTCGAAATTTTAGATTCTTcactctttttctctttttga
atcgaacaaagtaattatttttccgCACCCTATCGATTTCAGCCGGCAAA
TTACTGGAGGAGTTACGAGGACACTCTGACCCCATCAGCAAGATTTGTCT
CGTTCCTGGAGGAAATAAAGTATAACTTTCGTTCAGTTTTTTTCATCAAT
CttgtgttttttcattttctaaggtACTTAATAAGTTCGCAATATCCACC
ATAGTTAGGATAAACAAAGTATAGCTGGAGGCTAGAAATTACTTTATCTA
TCACGATTCCGAAGTTTTATAGCGTTTCAAATTtgttaagaattttttca
cGAGCATagaccaacgatgtaaaaataatagataaccaactacctctaga
aggcacttctcccaagagaacaaccattgttttcctattgaaatgagcac
tcctttaaataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttacgat
gcaaaatgtcattaatatttttacaaccataacacggatgttttttgaga
atcaaggcaagttggttatctattatttttacatcgttgcatAGACCTTC
GCGAATTTCCCTGttaatcgcgaaagtttctacttgcgaaagtttgtacg
cttaaAGTATTATGCAGGAATTGCTAACATTATATTAGGAGAAGTCCTAA
GGCATTTTATTTTGGAAGCACATCCAATAGCTCAATGAAaacgaaatttg
aaatttattctcTTCTCGATCcaaattatgaaaaatgttttcgCTTTACC
GACATCCTGCGGGGTCAGTTTTGCAACTTTCAGAGTTTCATTCAAGAACA
ACAACAAATGCATCATTCATATCCTAACATGGTCATGGCAGAGCTCAATT
ATTGAGCTTATTATTATGCTAACAAATCACTGGGAGCAGACGAGATTCAC
CCTATCATGCTAAAAAAAGATTGCGTTTTATATAGCTACTCTCCTTTTAC
ATATTATGTCCAAATCATTCAAGAGTATGTATCTCCGATTTATAAGAAAG
GAAAAATGAACCTGGCACTACACTACAGACTCGTCAGACTTACATCAGTT
GCGTTTAGACTAATGGAAAGAATATTGAAGTAATAAGTCGTGGAGCACCT
GTCGAAAGAGAAGTTACTATTTTTACAAAGTGGGCAGACTCGATATCAAA
CGAAAAGGTGGTTGATGCTGGTTGATGTGATTTATTTTGACTTCGCAAAG
ACAATTGACACCGTTACGCATCGTAGACTATTGAAAAAGCTGAATGCCTA
TGTCATCAGAGGTGATTGAATGGATAGAATCTTTATGTCTGATTGCCATC
AACATCTGAAAGTCAATAAAACTTTatccaaaaaaatgcaaagtATTAAG
TGGTGTGCCACAAGGAAGTGTTATGGGTCCATTACTTTTTGTCATCTATA
TAAACGATCTAGCTGAAGTTAATAGCTCAGAAATGTTCCTCGTTGCCGAA
GATACCAAGATTCTTGATGAAATAAATAGTATCCAGGATGCAATTAGACT
ACAGCAAGACATCGACGCAATAGAAAAGTGGTCCAGATATTGGCTTCTAA
GGTTCCATCCAGAAAAGTGTCACGTGTTGACACTTGATCACTGGTTCTGT
CCTAGGACACGTTGACCAAGAAAAGAATATCGGGATGATTATCGATAGCG
AACTTAAATTCGAAGAGCATATCTATAGCAAGATGAAAAAAAACCAACTC
TTTCGTCGAATTAATAAACAGaagtttcgatttcgatttccTTTCACCCG
GAAATGCTCCGTGGATAACATTCGTACGACCTCTCCTTTAGTATGCACAA
GCTGTTCGGTGTCCAAGGCTCATCAAGCATATTAATGCAATCGAAAATGT
CCAGTGAAGAGCCACAAGACTCGTAAGAGGTTACAGGAACCGTATGAAGA
ATGTCTACGAATTTTGAATTTACCAAGTCTTAAAGCAAGGCGTGAAATCG
GGGACATGgtggaaatatataaaaaacatCTAAATATTTATGATAAATCT
GCCACCTCAAAGAAATTCGTTCTTCGTAATCGACATCAACGCAAGCATAA
CCAGGAGCTACGAAGGAACTTTGCCAATGTTGGAATGAGAGGATATCAAA
CTAACTCGCTTTATTTACCGAGGAATCGATACATAGAATCGTTTAGGCGT
CAAGGTCGTGAATGCCCCATCTGTCAGTAAGTTCAAGGAAGAACTTACAA
TGGAATGGgaaaattttgactaattttaAGCCCATATTTGGTTTGGCAAC
TATTAAAACTAAGAATCTttgtgttgaacggtgaaaaagaaagcggctgt
tatattttgattttttccctAACTAAGAATCTTTAAAATGTCTGGCTGAA
AAACTTAGAATATTGTTTGAGGCTGAGCCAAAACTAATTTACTGTTTGTA
TTAAAAAGCCTGTATATCtcaggaaaaattatttttagattttaacaTGT
GGCTTATACCATGAAAGTATCCTTTGGGAATTACCAAATACGGACGAAGT
ACAGAATAACTCAGCACCAATGCAAAGAAACTTAGACGGAAGAGTGAAGT
GGTGTTCTTTCATAAGAGAAGGGAATTACTTTTTAACCCTTGCTGAGGGT
TGGTTAAGGTAAAATTTACTTATTAAGATTATATTCTCCTAGAAGATCTC
ATTCATATACTTTCCTTTGAAAGTCAACATTTTTTAATGCTCTAATCGAT
ATCGGGTCAGATACAGAATACATAACTAAATTCTACTtcgaaaaaattct
tatttttgcaATCATTTTTCTTGAGGAGACAAATATTATCGCTAAATGTA
ATTCCTCtttagaaatactttttttatgTTTACTGTTAAAAATATCATCC
TTATCTTATTTTTAAGACTATACGAACTTCATGAAACATCCAATATCGAA
TTGAAATTATCCAAAGAAATATTCAAGAGTAGTAAACAACGATGTATCAT
TCATCCAGATAGGAAACACATATTTGTTTTCAGTAGTAATTCAAACATAG
CTTGTCTTAACATCGATGGCTTCGAATCTGTCTCTGAATATAATGTTGTC
CCTAGTGAAGATGGGACAAAGTTAACTGACATGGACATCAATAGTAATGG
CACACATCTATTGGTTACTGCGAATATACAGAGAGGCTCAGGTGTGGGCA
AGGTAAGATCCCTCTTTTTTAAACACCTGATGAACCAATTTAAAAGGTAA
ATCAGCAAAAGTCCACGCTAATGTATGAGAAAAGTACTCTAAATGTTTAC
CCCATTGCAATAAACCTTTTACAGGGGAGACATATAGTAAGGATTTTTTC
AACGGATCTGCCTATAAAGAGGGGAAAACATTTTGAACTGTCTTAATTTT
TTAAGGTGGAACCTAACAAGCCAAaaccattttttataagaatatcactA
CTATAATTAAGATTACCAATTTTCGGgcatttttagagtatttttacCTT
TGAAAGTGCAAATAACCCTTAATCAGTGCTCAAGAAACACCttcatttat
tttcattcaagtTATGCATTACGTGTTGCATTTAGGTTGGGTTAGGAATT
TGAATCCTAACTCAGAAATACTGTTAAGAATGTTTTaggtttttattttc
aaatgataagaatatccatgatgaaatttaGACACCATTTTCATAGTAAA
AAACGTGTGCTGTCAAACCCCTTAAAAAGGAATATCTAAACTCAATTTGT
TTCATTTACGAAAGGTATTAGATATTTCGGACGTTGCGTCATTCAAGGAA
AAATTGTCACTCGAAGGTTATAGTGGGCGGATTTCAGGCTGCGCAATAAA
CAATAATGGTGATCTAGCTTGTCTTTTTGGCAAATATGGGGGTAAGTTGG
ATCTAATACTGTCATGAGTACATCCTTTACTAAATGTAAATAGCATATTT
ATTCTATACTTAACTTCtatcaataaaagttattcaatCATAACGCCGTA
GCTAACAACAACGATAGCTGCCTTCTATTCTCCAAATATACAACCAATGA
AATAACTCTGTAAATTCACCAAtcaaaatctagaatgaactcTGAAAGCA
AACGTTTAACGAACGATTCGACCAACCGTGAGAAAAAAGATAATCCCTGG
AATTCGAACATTCCTCTCGGTNTGATTAACCGTGAGAAAAAAGATAATCC
CTGGAATTCAAACATTCCTCTTGGTAAAGACCAAACCATCAACTACGTAA
GCACGAGATTTTCAATACAAACCTGACAAAAACATTACCTAATATTGCAA
AGAATCCACCAATCAAACTAAGAGAACAAACTTTTAGATAAACGTTCACA
GAACGATCCACTCAACTGAAAGAAAAGATAATCCGTAAAACCCAAATAAG
GAGTGTtataaatttcacaaaaaaaaggTTTGGGCAAATCCTAGCAAATG
GAAAAACCTTAACCGCAAATTGCGTTACACGAAATTCTTAAAAACAATAC
GTACTAGCAAGACAAGGCAACGTTGGAGCAACGTTCTtcatcaaacaaaa
gaaaacgtgggaaaaacaaaaagaaggaGTGGCGCTCCACCACCTCAAAA
ACAATATAAATACAGGAGTTGAAATCAATGAACGCAGTTAAGGGAAGCAA
GCGAATAGagaagaaataaatcaaaaaaagcTAGGCCATCAGCCTAAAAA
ACAAATAGCGAGGCCATCAGCCCGCACTAAACGTACTCTTTTATTGTAAT
TacgaatttgaatttaaaggaagaagaaaagaatCTAAGGGAAATTAACT
AATAGCGAACCCCTTAAATACATCGTGTCAAATCATTATTTGGAATCATT
TGAAAATAAGACTTAGAGAATATACTTTAGTAACAACAAAAAAGGTGATT
GTTACAGTACTTAGAAATAGATAAAAGACGNtatttgaaaataaaactta
gAGAATATACTTTAGTAACAACAAAAAAGGTGATTGTTACAATACCTTCA
GTGCATTAGATTcagaataaatttatttttgtagtTAGTCGAAAGACTAT
TTTTGTGGGCTTTTTTATTTAGCGATATTTGTCTAAAATCGCATAATCCC
CAACACAAACAACATATTTAAGACCATTGTCGCCCAGAAAGCTGTCGACG
AAATAAGcattatattgattttttttttataaaacaataTTAAGAGCCTA
ATTTCTACGCCATAGGTGTTGATATAAACGGTTAATTTAGCCTTCCCTGT
TTACCCTCCTCCTTTATTTGTAGGTTTTATGGTTTTTGATTTGACCAATG
GTGAGGTGAAATACAATGTTCAGCGTAGGACATCTTTCGTCAGATTCTTT
TCATCGAATTGTATTTTATATGGCGAAGAAACAATTTTCTACAAATACGA
TCCAGAATCTGAAAAAGATGTCTGTGAATATAAAGGTATCATTTTTGAAC
TCGGTGATAAAGTTNTCCAGAATCTGAAAAAGATGTCTGTGAATATAAAG
GTATCATTTTTGAACTCGGTGATCAAGTTCAGATTGTATTTTGATATACA
ATCGTAGTTTTAGTCGACTTCTACAAATTTTACGTAATTTTCTGTCAAAA
ATGAATTCGCAAAAACTTGTGCCACTTTATCATTTTTTCAATCATGTTAT
ATGTGTCACTTTTATAAATTCTGCCTTTACAACGACCTTTTTTGTTTACT
TACCATCGCCGCCATTTTCCGCCCATCTTCTGTTTTACTGCTGAAAGATA
AGTCCACGAATAAAAGAAACAAGTTAAAGCATTTTATAAATCCCCTTTAC
TTTCAATATACAATCTTTTAGGACACACTGTGGAGTACTGCACTGACGCT
GTTATTTTGAATGAGGATGAACAAATTATGACTGTTTCACAAGAAGGAAC
TTTAAGAATTTTCGATGCCAACACTGGAGAAAATATTTATGGATTTTACA
ATCATCGATCTCAAGGTTTTACGTGTGTAGCCGCTCATCCATCTGAGAAA
ATCTTCTTAGCGgctagtgaaagttcgtcggtgtACGTCCTTAAAACGAC
TCCTAATGATCAACTTAATAATGGTCATAAGCAGTAAAGCATCGGTTGGT
TCAAAGAAGACAGACACACTTGCATACTTATGGATGTAGTTGTTCAAGCA
CTTTTTTCTTCGCTTGACATTTTACGGGTCAATTCATTCATTTATAGATC
TGAGTATTACTATTAATAATTCATCCATAcactcattcattcattcatcc
aatcattcattcattcacgcATTTATTTATCATTTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011685XLOC_011685Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020833-exon-sc0000371-1491911889:56194..56322TCONS_00020833-exon-sc0000371-1491911889:56194..56322Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:56194..56322TCONS_00020833-exon-sc0000371-1510915933:56194..56322Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:56194..56322TCONS_00020833-exon-sc0000371-1575043694:56194..56322Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1491911889:56774..56974TCONS_00020833-exon-sc0000371-1491911889:56774..56974Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:56774..56974TCONS_00020833-exon-sc0000371-1510915933:56774..56974Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:56774..56974TCONS_00020833-exon-sc0000371-1575043694:56774..56974Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1491911889:58064..58654TCONS_00020833-exon-sc0000371-1491911889:58064..58654Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:58064..58654TCONS_00020833-exon-sc0000371-1510915933:58064..58654Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:58064..58654TCONS_00020833-exon-sc0000371-1575043694:58064..58654Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1491911889:58886..59718TCONS_00020833-exon-sc0000371-1491911889:58886..59718Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:58886..59718TCONS_00020833-exon-sc0000371-1510915933:58886..59718Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:58886..59718TCONS_00020833-exon-sc0000371-1575043694:58886..59718Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1491911889:60886..61135TCONS_00020833-exon-sc0000371-1491911889:60886..61135Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:60886..61135TCONS_00020833-exon-sc0000371-1510915933:60886..61135Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:60886..61135TCONS_00020833-exon-sc0000371-1575043694:60886..61135Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1491911889:61614..61711TCONS_00020833-exon-sc0000371-1491911889:61614..61711Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:61614..61711TCONS_00020833-exon-sc0000371-1510915933:61614..61711Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:61614..61711TCONS_00020833-exon-sc0000371-1575043694:61614..61711Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1491911889:62597..62789TCONS_00020833-exon-sc0000371-1491911889:62597..62789Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:62597..62789TCONS_00020833-exon-sc0000371-1510915933:62597..62789Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:62597..62789TCONS_00020833-exon-sc0000371-1575043694:62597..62789Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1491911889:63136..63212TCONS_00020833-exon-sc0000371-1491911889:63136..63212Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:63136..63212TCONS_00020833-exon-sc0000371-1510915933:63136..63212Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:63136..63212TCONS_00020833-exon-sc0000371-1575043694:63136..63212Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1491911889:66132..66301TCONS_00020833-exon-sc0000371-1491911889:66132..66301Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:66132..66301TCONS_00020833-exon-sc0000371-1510915933:66132..66301Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:66132..66301TCONS_00020833-exon-sc0000371-1575043694:66132..66301Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1491911889:66560..66845TCONS_00020833-exon-sc0000371-1491911889:66560..66845Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:66560..66845TCONS_00020833-exon-sc0000371-1510915933:66560..66845Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:66560..66845TCONS_00020833-exon-sc0000371-1575043694:66560..66845Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1491911889:67408..67534TCONS_00020833-exon-sc0000371-1491911889:67408..67534Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:67408..67534TCONS_00020833-exon-sc0000371-1510915933:67408..67534Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:67408..67534TCONS_00020833-exon-sc0000371-1575043694:67408..67534Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1491911889:68917..69078TCONS_00020833-exon-sc0000371-1491911889:68917..69078Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:68917..69078TCONS_00020833-exon-sc0000371-1510915933:68917..69078Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:68917..69078TCONS_00020833-exon-sc0000371-1575043694:68917..69078Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1491911889:69465..69931TCONS_00020833-exon-sc0000371-1491911889:69465..69931Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1510915933:69465..69931TCONS_00020833-exon-sc0000371-1510915933:69465..69931Clytia hemisphaericaexon
TCONS_00020833-exon-sc0000371-1575043694:69465..69931TCONS_00020833-exon-sc0000371-1575043694:69465..69931Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000371supercontigsc0000371:56194..69931 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.87493	6.83304	4.75364	3.62382	8.35342	5.98683	7.74708	8.16521	4.38131	5.4791	3.11175	3.19118	3.16713	3.09993	1.74422	2.06483	1.82159	1.83266	2.78918	3.35836	1.48428	1.82985	2.88911	3.72363	3.29131	4.51453	3.03404	2.10354	1.88561	2.1438
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020833 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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