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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020843 ID=TCONS_00020843|Name=TCONS_00020843|organism=Clytia hemisphaerica|type=transcript|length=775bp
GGCAAGCGAGGGGAGAAAAAAATCGCCTGAAACAGAAAGAATacAATTCG
TCTACTGGAAAGTGAGTGCCAGAAAAGTCTACGCGGTCCCACGTGAAGAA
CTCGATCGAAGAAATGAACGGGCAAATGGATCAAATTCGACAAGCCAGGT
TGACGAGCAACGACAACAACAGCTTCATATGGACCTCACTTCAAAGATAT
CTGGGATGGAGCTCAATATCCAAAATGGAATCGAAAGAAGTACACAGCAA
CTGCAAGAATCAATTTCCACAATAAGGCTTGTTGGGCCACTCAAAGATGC
GTTACGATGCCTTTATTGCAGAGGTACCTCCAGACCCCCAGTGATCTACG
GGCTCTGTTGTGGTCAAGTTATTGGTTGTGGAGAGTGTCATTTACACTAC
GATGGCGAGACGTGTATTCATTGTAGGAGTAATGAGTTTTCGACCATTCA
ACTACGCTTTTTTGATGCATTACTCGAAATAATGCACCAACTCAACATGT
GATGAACTATTTACAGTATAGTATAGTATCTTATGAAGTCTTCTTTTTGT
ACATATCATCTTTGAAAAGCGAAAACATATCTACTACATCGTGGAAATCG
CCATGAAGTTGTACATTTCTTTACTCAAAGTAATAGCTGGACTAAGTAAC
AACTAAAAATCATTTAGTTCATCGTTTATGACTTAAAATTATTATCGagc
aagtttttttataatatcgaAATCCCTCTAAACATGCCTTTTGAATTTAC
GCTCTTCATCATAGAgccaattttt Run BLAST on NCBI transcript from alignment at sc0000371:255216..256251+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020843 ID=TCONS_00020843|Name=TCONS_00020843|organism=Clytia hemisphaerica|type=transcript|length=1036bp|location=Sequence derived from alignment at sc0000371:255216..256251+ (Clytia hemisphaerica)
GGCAAGCGAGGGGAGAAAAAAATCGCCTGAAACAGAAAGAATacgtaatt
tttatttattaaaaaatattttaaaaagcgTGTAGCAACCAAACCCTTAT
TCACTTTTGATACACGAttttacttttataaaaatatcttcTATGAGAAT
ATCAAGTCGTGATTTAGGATTTAGAACAACAGGTTTATTGTTTAGAAATA
AGACCCATAACAAAAAAGCACTACTGTATGCTGATAAGAAATAAAGCGTG
AAACAATAGTCGTATCCTCGTTGTCTATTAAAGtttcttttgtaattttc
tcCAGAATTCGTCTACTGGAAAGTGAGTGCCAGAAAAGTCTACGCGGTCC
CACGTGAAGAACTCGATCGAAGAAATGAACGGGCAAATGGATCAAATTCG
ACAAGCCAGGTTGACGAGCAACGACAACAACAGCTTCATATGGACCTCAC
TTCAAAGATATCTGGGATGGAGCTCAATATCCAAAATGGAATCGAAAGAA
GTACACAGCAACTGCAAGAATCAATTTCCACAATAAGGCTTGTTGGGCCA
CTCAAAGATGCGTTACGATGCCTTTATTGCAGAGGTACCTCCAGACCCCC
AGTGATCTACGGGCTCTGTTGTGGTCAAGTTATTGGTTGTGGAGAGTGTC
ATTTACACTACGATGGCGAGACGTGTATTCATTGTAGGAGTAATGAGTTT
TCGACCATTCAACTACGCTTTTTTGATGCATTACTCGAAATAATGCACCA
ACTCAACATGTGATGAACTATTTACAGTATAGTATAGTATCTTATGAAGT
CTTCTTTTTGTACATATCATCTTTGAAAAGCGAAAACATATCTACTACAT
CGTGGAAATCGCCATGAAGTTGTACATTTCTTTACTCAAAGTAATAGCTG
GACTAAGTAACAACTAAAAATCATTTAGTTCATCGTTTATGACTTAAAAT
TATTATCGagcaagtttttttataatatcgaAATCCCTCTAAACATGCCT
TTTGAATTTACGCTCTTCATCATAGAgccaattttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020843-exon-sc0000371-1491911889:255216..255259 | TCONS_00020843-exon-sc0000371-1491911889:255216..255259 | Clytia hemisphaerica | exon |
| TCONS_00020843-exon-sc0000371-1510915933:255216..255259 | TCONS_00020843-exon-sc0000371-1510915933:255216..255259 | Clytia hemisphaerica | exon |
| TCONS_00020843-exon-sc0000371-1575043694:255216..255259 | TCONS_00020843-exon-sc0000371-1575043694:255216..255259 | Clytia hemisphaerica | exon |
| TCONS_00020843-exon-sc0000371-1491911889:255521..256251 | TCONS_00020843-exon-sc0000371-1491911889:255521..256251 | Clytia hemisphaerica | exon |
| TCONS_00020843-exon-sc0000371-1510915933:255521..256251 | TCONS_00020843-exon-sc0000371-1510915933:255521..256251 | Clytia hemisphaerica | exon |
| TCONS_00020843-exon-sc0000371-1575043694:255521..256251 | TCONS_00020843-exon-sc0000371-1575043694:255521..256251 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000371 | supercontig | sc0000371:255216..256251 + |
Blast
The following BLAST results are available for this feature:
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